>SFMA_ECOLI (P0ABW5) Sfm fimbrial protein, A chain precursor (Type-1A pilin)|
          Length = 180

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +2

Query: 26  VLD*QLGAXKQYGNSCPTNMNQASSDTIHIYSHRQRGTSDQAPQGKQNA 172
           +LD      K  GNS  TN N      +  +S R +GT   A  G+ NA
Sbjct: 123 ILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANA 171

>SFMA_ECO57 (P0ABW6) Sfm fimbrial protein, A chain precursor (Type-1A pilin)|
          Length = 180

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +2

Query: 26  VLD*QLGAXKQYGNSCPTNMNQASSDTIHIYSHRQRGTSDQAPQGKQNA 172
           +LD      K  GNS  TN N      +  +S R +GT   A  G+ NA
Sbjct: 123 ILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANA 171

>DXS_CHLCV (Q823V1) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 644

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +2

Query: 20  QAVLD*QLGAXKQYGNSCPTNMNQASSDTIHIYSHRQRGTSDQAPQGKQNALLGLGHVAD 199
           Q+ L   +    +Y N   T  +  ++D   ++ HR  G  +   QG+   +LGLGH+ +
Sbjct: 465 QSSLQWNMPVAIRYPNIAATQRDPIATD---VHMHRDPGVGEILSQGEDVLILGLGHMCN 521

>VE1_HPV63 (Q07847) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 618

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +3

Query: 141 LTRRHKESRTL--YWVLAMWRIRXTT 212
           LTR +K ++T   YWV+A+W +  T+
Sbjct: 190 LTRAYKNNKTCCSYWVIAVWGVTSTS 215

>EBP_HUMAN (Q15125) 3-beta-hydroxysteroid-delta(8),delta(7)-isomerase (EC|
           5.3.3.5) (Cholestenol delta-isomerase) (Delta8-delta7
           sterol isomerase) (D8-D7 sterol isomerase)
           (Emopamil-binding protein)
          Length = 229

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -1

Query: 192 TWPRPSRAFCFPCGAWSEVPLCLWE*MWMVSL--DAWFMLVGHEL 64
           TW    RA   P G W  + LC +     + L  + WF+L   +L
Sbjct: 45  TWLLSGRAAVVPLGTWRRLSLCWFAVCGFIHLVIEGWFVLYYEDL 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,891,227
Number of Sequences: 219361
Number of extensions: 552635
Number of successful extensions: 1358
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)