| Clone Name | rbags35f07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1327 Score = 204 bits (103), Expect = 2e-49 Identities = 259/311 (83%) Strand = Plus / Minus Query: 240 atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299 |||||||| ||||||||||| ||||| || || | |||||||||||| |||||||||| Sbjct: 1051 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 992 Query: 300 cagccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacc 359 || |||||||| || ||||| ||||||||||||||| ||||| | | |||| ||||||| Sbjct: 991 caaccatcgtttccattcttccccttgaaaagcatcaccagggcaatcacaaacccaact 932 Query: 360 agcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggt 419 ||||| |||| ||||| | |||||| | |||||||||| |||||||| | ||| Sbjct: 931 agcagcaagaagagtgcaacagcccacaaaacatactggtatgctctgtactttcgtggt 872 Query: 420 tgatcggtctgaggcaactcatggcgttccatccaaccaaattgaggccttgctagcagc 479 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 871 tgattagtctgaggcaactcatgacgttccatccaaccaaattgaggtcttgccagcagg 812 Query: 480 acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgc 539 ||||| |||| |||||| || | ||| || ||||||||||| ||||| |||||||| || Sbjct: 811 acaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaaagttatcagcgtga 752 Query: 540 ggtagtatccc 550 ||||||||||| Sbjct: 751 ggtagtatccc 741
>dbj|AK061056.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H06, full insert sequence Length = 1327 Score = 204 bits (103), Expect = 2e-49 Identities = 259/311 (83%) Strand = Plus / Minus Query: 240 atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299 |||||||| ||||||||||| ||||| || || | |||||||||||| |||||||||| Sbjct: 1051 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 992 Query: 300 cagccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacc 359 || |||||||| || ||||| ||||||||||||||| ||||| | | |||| ||||||| Sbjct: 991 caaccatcgtttccattcttccccttgaaaagcatcaccagggcaatcacaaacccaact 932 Query: 360 agcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggt 419 ||||| |||| ||||| | |||||| | |||||||||| |||||||| | ||| Sbjct: 931 agcagcaagaagagtgcaacagcccacaaaacatactggtatgctctgtactttcgtggt 872 Query: 420 tgatcggtctgaggcaactcatggcgttccatccaaccaaattgaggccttgctagcagc 479 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 871 tgattagtctgaggcaactcatgacgttccatccaaccaaattgaggtcttgccagcagg 812 Query: 480 acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgc 539 ||||| |||| |||||| || | ||| || ||||||||||| ||||| |||||||| || Sbjct: 811 acaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaaagttatcagcgtga 752 Query: 540 ggtagtatccc 550 ||||||||||| Sbjct: 751 ggtagtatccc 741
>gb|L13655.1|SCFMEMPRO Saccharum hybrid cultivar H65-7052 membrane protein mRNA, complete cds Length = 1279 Score = 139 bits (70), Expect = 1e-29 Identities = 250/310 (80%) Strand = Plus / Minus Query: 241 tctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggc 300 |||| ||| ||||||||||| | || || ||||||||||||||||| |||||||||||| Sbjct: 1101 tctaggtgttgcacttccacttagatgttggcacgcagttcaggtagtggcaccagtggc 1042 Query: 301 agccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacca 360 |||||||||| || ||||| || |||||||||||| |||| | |||| ||||||| | Sbjct: 1041 agccatcgttcccattcttccctttgaaaagcatcaccagtgaaatcacaaacccaacta 982 Query: 361 gcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggtt 420 ||| |||| |||||| | |||||| | ||||||||| |||||||| || |||| Sbjct: 981 acagcaagacgagtgccacaacccacaaaatatactggtatgctttgtacttgggaggtt 922 Query: 421 gatcggtctgaggcaactcatggcgttccatccaaccaaattgaggccttgctagcagca 480 | | ||||| |||||||||||||| |||||||| | ||||||||||||||| | ||| | Sbjct: 921 ggttagtctgtggcaactcatggcgctccatccagctaaattgaggccttgccaacagaa 862 Query: 481 caaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcg 540 |||| || || ||||| || | | |||| ||||||||||| ||||| || ||| | || | Sbjct: 861 caaaccccaagaggaaacccgtcgcgaatccaccaatgtgagcaaagttgtcaacgtgag 802 Query: 541 gtagtatccc 550 |||||||||| Sbjct: 801 gtagtatccc 792
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 137 bits (69), Expect = 4e-29 Identities = 126/145 (86%) Strand = Plus / Plus Query: 406 tgtactttgggggttgatcggtctgaggcaactcatggcgttccatccaaccaaattgag 465 |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 27369456 tgtactttcgtggttgattagtctgaggcaactcatgacgttccatccaaccaaattgag 27369515 Query: 466 gccttgctagcagcacaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaa 525 | ||||| ||||| ||||| |||| |||||| || | ||| || ||||||||||| |||| Sbjct: 27369516 gtcttgccagcaggacaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaa 27369575 Query: 526 aattatcagcatgcggtagtatccc 550 | |||||||| || ||||||||||| Sbjct: 27369576 agttatcagcgtgaggtagtatccc 27369600 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 240 atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299 |||||||| ||||||||||| ||||| || || | |||||||||||| |||||||||| Sbjct: 27369086 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 27369145 Query: 300 cagccatcgttgccgttctttcccttgaaaagcatcgccagg 341 || |||||||| || ||||| ||||||||||||||| ||||| Sbjct: 27369146 caaccatcgtttccattcttccccttgaaaagcatcaccagg 27369187
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 137 bits (69), Expect = 4e-29 Identities = 126/145 (86%) Strand = Plus / Plus Query: 406 tgtactttgggggttgatcggtctgaggcaactcatggcgttccatccaaccaaattgag 465 |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 70983 tgtactttcgtggttgattagtctgaggcaactcatgacgttccatccaaccaaattgag 71042 Query: 466 gccttgctagcagcacaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaa 525 | ||||| ||||| ||||| |||| |||||| || | ||| || ||||||||||| |||| Sbjct: 71043 gtcttgccagcaggacaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaa 71102 Query: 526 aattatcagcatgcggtagtatccc 550 | |||||||| || ||||||||||| Sbjct: 71103 agttatcagcgtgaggtagtatccc 71127 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 240 atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299 |||||||| ||||||||||| ||||| || || | |||||||||||| |||||||||| Sbjct: 70613 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 70672 Query: 300 cagccatcgttgccgttctttcccttgaaaagcatcgccagg 341 || |||||||| || ||||| ||||||||||||||| ||||| Sbjct: 70673 caaccatcgtttccattcttccccttgaaaagcatcaccagg 70714
>gb|AY105232.1| Zea mays PCO078286 mRNA sequence Length = 593 Score = 131 bits (66), Expect = 3e-27 Identities = 228/282 (80%) Strand = Plus / Minus Query: 251 gcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgtt 310 ||||||||| |||||||| || |||||||||||||| ||||||||||||||| ||||| Sbjct: 289 gcacttccatctggacgttggtacgcagttcaggtaatggcaccagtggcagctgtcgtt 230 Query: 311 gccgttctttcccttgaaaagcatcgccaggccgaccacatacccaaccagcagaaagag 370 || ||||| ||| |||| ||||| ||| | | || ||||||| | ||| ||||| Sbjct: 229 cccattcttacccgtgaagagcatgaccaagataatggcaaacccaactaccagcaagag 170 Query: 371 cagtgccgcgccccacagagcatactggtacatcttgtactttgggggttgatcggtctg 430 ||||| || |||||| ||||||||||| ||||||||||| |||||| ||||| Sbjct: 169 gagtgcagcaacccacaagacatactggtacgatttgtactttggaggttgactagtctg 110 Query: 431 aggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaa 490 ||| | ||| |||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 109 aggtagctcgctgcgttccatccaaccaaattgaggtcttgccagcagcacaaatccaat 50 Query: 491 aaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532 ||| ||||| || | || ||||||||||| ||||||||||| Sbjct: 49 aagaaacccagaagcaaatccaccaatgtgggcaaaattatc 8
>gb|AY105455.1| Zea mays PCO077618 mRNA sequence Length = 1387 Score = 125 bits (63), Expect = 2e-25 Identities = 240/299 (80%) Strand = Plus / Minus Query: 252 cacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgttg 311 ||||||||| |||| || ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1144 cacttccacttggatgttggcacgcagttcaggtagtggcaccaatggcagccatcgttc 1085 Query: 312 ccgttctttcccttgaaaagcatcgccaggccgaccacatacccaaccagcagaaagagc 371 |||||||| || |||||||||||| |||| | |||| ||||||| | ||| |||| Sbjct: 1084 ccgttcttccctttgaaaagcatcaccagtgaaatcacaaacccaactaacagcaagacg 1025 Query: 372 agtgccgcgccccacagagcatactggtacatcttgtactttgggggttgatcggtctga 431 |||||| | |||||| | ||||||||| |||||||| || ||||| | || || Sbjct: 1024 agtgccacaacccacaaaatatactggtatgctttgtacttgggaggttggttagtgtgt 965 Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491 ||||||||||| | ||||||||| | ||||||||||||||| | ||| ||||| || || Sbjct: 964 ggcaactcatgactttccatccagctaaattgaggccttgccaacagaacaaaacccaag 905 Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550 ||||| || | | |||| ||||||||||| ||||| || ||| | || ||||||||||| Sbjct: 904 aggaaacccgtcgcgaatccaccaatgtgagcaaagttgtcaacgtgaggtagtatccc 846
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491 ||||||||||| ||||||||||||||||| || |||||||| | || |||||||| ||| Sbjct: 20249060 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 20249119 Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550 ||||| || | ||| || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 20249120 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 20249178 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 250 tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309 ||||||||||| | || ||||| |||||||||||||| ||||||||||||| || || | Sbjct: 20248680 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 20248739 Query: 310 tgccgttctttcccttgaaaagcatc 335 | || ||||| |||||||| |||||| Sbjct: 20248740 ttccattcttacccttgaagagcatc 20248765
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491 ||||||||||| ||||||||||||||||| || |||||||| | || |||||||| ||| Sbjct: 28187 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 28246 Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550 ||||| || | ||| || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 28247 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 28305 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 250 tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309 ||||||||||| | || ||||| |||||||||||||| ||||||||||||| || || | Sbjct: 27807 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 27866 Query: 310 tgccgttctttcccttgaaaagcatc 335 | || ||||| |||||||| |||||| Sbjct: 27867 ttccattcttacccttgaagagcatc 27892
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491 ||||||||||| ||||||||||||||||| || |||||||| | || |||||||| ||| Sbjct: 142560 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 142619 Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550 ||||| || | ||| || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 142620 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 142678 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 250 tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309 ||||||||||| | || ||||| |||||||||||||| ||||||||||||| || || | Sbjct: 142180 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 142239 Query: 310 tgccgttctttcccttgaaaagcatc 335 | || ||||| |||||||| |||||| Sbjct: 142240 ttccattcttacccttgaagagcatc 142265
>dbj|AK071290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087M04, full insert sequence Length = 1263 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491 ||||||||||| ||||||||||||||||| || |||||||| | || |||||||| ||| Sbjct: 878 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 819 Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550 ||||| || | ||| || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 818 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 760 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 250 tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309 ||||||||||| | || ||||| |||||||||||||| ||||||||||||| || || | Sbjct: 1060 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 1001 Query: 310 tgccgttctttcccttgaaaagcatc 335 | || ||||| |||||||| |||||| Sbjct: 1000 ttccattcttacccttgaagagcatc 975
>dbj|AK059988.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H11, full insert sequence Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491 ||||||||||| ||||||||||||||||| || |||||||| | || |||||||| ||| Sbjct: 860 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 801 Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550 ||||| || | ||| || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 800 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 250 tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309 ||||||||||| | || ||||| |||||||||||||| ||||||||||||| || || | Sbjct: 1042 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 983 Query: 310 tgccgttctttcccttgaaaagcatc 335 | || ||||| |||||||| |||||| Sbjct: 982 ttccattcttacccttgaagagcatc 957
>gb|BT019048.1| Zea mays clone Contig569.F mRNA sequence Length = 928 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491 ||||||||||| | ||||||||| | ||||||||||||||| | ||| ||||| || || Sbjct: 419 ggcaactcatgactttccatccagctaaattgaggccttgccaacagaacaaaacccaag 478 Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550 ||||| | | | |||| ||||||||||| ||||| || ||| | || ||||||||||| Sbjct: 479 aggaaatccgtcgcgaatccaccaatgtgagcaaagttgtcaacgtgaggtagtatccc 537
>emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M21, complete sequence Length = 151218 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 240 atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299 |||||| | ||||||||||| ||||| || |||| |||||||| ||| |||| ||||| Sbjct: 100774 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 100833 Query: 300 cagccatcgttgccgttctttcccttgaaaagcatc 335 || |||||||| || |||| ||||| ||||||||| Sbjct: 100834 caaccatcgtttccagtcttccccttcaaaagcatc 100869
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 240 atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299 |||||| | ||||||||||| ||||| || |||| |||||||| ||| |||| ||||| Sbjct: 13106961 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 13107020 Query: 300 cagccatcgttgccgttctttcccttgaaaagcatc 335 || |||||||| || |||| ||||| ||||||||| Sbjct: 13107021 caaccatcgtttccagtcttccccttcaaaagcatc 13107056
>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23, complete sequence Length = 165683 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 240 atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299 |||||| | ||||||||||| ||||| || |||| |||||||| ||| |||| ||||| Sbjct: 39171 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 39230 Query: 300 cagccatcgttgccgttctttcccttgaaaagcatc 335 || |||||||| || |||| ||||| ||||||||| Sbjct: 39231 caaccatcgtttccagtcttccccttcaaaagcatc 39266
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 480 acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532 |||||||||| |||||||||||| | | || |||||||||||||| ||||| Sbjct: 28545 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 28597
>dbj|AB200415.1| Siphonosoma cumanense HTK gene for hypotaurocyamine kinase, complete cds Length = 2524 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 catggcgttccatccaaccaa 459 ||||||||||||||||||||| Sbjct: 257 catggcgttccatccaaccaa 277
>dbj|AB186407.1| Siphonosoma cumanense mRNA for hypotaurocyamine kinase, complete cds Length = 1668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 catggcgttccatccaaccaa 459 ||||||||||||||||||||| Sbjct: 310 catggcgttccatccaaccaa 330
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 480 acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532 |||||||||| |||||||||||| | | || |||||||||||||| ||||| Sbjct: 28223444 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 28223496
>dbj|AK109134.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E01, full insert sequence Length = 1422 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 480 acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532 |||||||||| |||||||||||| | | || |||||||||||||| ||||| Sbjct: 847 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 795
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 480 acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532 |||||||||| |||||||||||| | | || |||||||||||||| ||||| Sbjct: 28208322 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 28208374
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggcagccatcgttgccgttc 317 |||||||||||||||||||| Sbjct: 109123 ggcagccatcgttgccgttc 109142
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggcagccatcgttgccgttc 317 |||||||||||||||||||| Sbjct: 108932 ggcagccatcgttgccgttc 108951
>emb|AL365356.13| Human DNA sequence from clone RP11-336A10 on chromosome 10 Contains the ASB13 gene for ankyrin repeat and SOCS box-containing 13, the 5' end of gene FLJ20360 (KIAA2006 FLJ34073 FLJ12904 FLJ23361 FLJ21109), three novel genes, a ribosomal protein L23a (RPL23A) pseudogene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 167676 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ctgtaaacacacaataaaaa 193 |||||||||||||||||||| Sbjct: 84067 ctgtaaacacacaataaaaa 84086
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 agcagtgccgcgccccacag 388 |||||||||||||||||||| Sbjct: 120193 agcagtgccgcgccccacag 120174
>dbj|AP004237.1| Proteus vulgaris plasmid Rts1 DNA, complete sequence Length = 217182 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 ccaatgtgcgcaaaattatcagca 536 ||||||||||| |||||||||||| Sbjct: 144793 ccaatgtgcgcgaaattatcagca 144816
>gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete sequence Length = 159875 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gtaaacacacaataaaaatg 195 |||||||||||||||||||| Sbjct: 97098 gtaaacacacaataaaaatg 97117
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ccagtggcagccatcgttgc 312 |||||||||||||||||||| Sbjct: 202876 ccagtggcagccatcgttgc 202857
>emb|AL160161.10| Human DNA sequence from clone RP1-188D3 on chromosome 6, complete sequence Length = 72159 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 acaataaaaatggctctccg 203 |||||||||||||||||||| Sbjct: 29267 acaataaaaatggctctccg 29286 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,015,826 Number of Sequences: 3902068 Number of extensions: 4015826 Number of successful extensions: 63621 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 63462 Number of HSP's gapped (non-prelim): 157 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)