ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_483633.1| Oryza sativa (japonica cultivar-group), mRNA 204 2e-49
2dbj|AK061056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
3gb|L13655.1|SCFMEMPRO Saccharum hybrid cultivar H65-7052 membran... 139 1e-29
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
5dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
6gb|AY105232.1| Zea mays PCO078286 mRNA sequence 131 3e-27
7gb|AY105455.1| Zea mays PCO077618 mRNA sequence 125 2e-25
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
9dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
10dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
11dbj|AK071290.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
12dbj|AK059988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
13gb|BT019048.1| Zea mays clone Contig569.F mRNA sequence 62 2e-06
14emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
17gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
18dbj|AB200415.1| Siphonosoma cumanense HTK gene for hypotaurocyam... 42 1.9
19dbj|AB186407.1| Siphonosoma cumanense mRNA for hypotaurocyamine ... 42 1.9
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
21dbj|AK109134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
22gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
23gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 7.5
24gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 7.5
25emb|AL365356.13| Human DNA sequence from clone RP11-336A10 on ch... 40 7.5
26emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 7.5
27dbj|AP004237.1| Proteus vulgaris plasmid Rts1 DNA, complete sequ... 40 7.5
28gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete... 40 7.5
29dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 7.5
30emb|AL160161.10| Human DNA sequence from clone RP1-188D3 on chro... 40 7.5

>ref|XM_483633.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1327

 Score =  204 bits (103), Expect = 2e-49
 Identities = 259/311 (83%)
 Strand = Plus / Minus

                                                                        
Query: 240  atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299
            |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 1051 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 992

                                                                        
Query: 300  cagccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacc 359
            || |||||||| || ||||| ||||||||||||||| ||||| | | |||| ||||||| 
Sbjct: 991  caaccatcgtttccattcttccccttgaaaagcatcaccagggcaatcacaaacccaact 932

                                                                        
Query: 360  agcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggt 419
            ||||| ||||  |||||  |  |||||| | ||||||||||     |||||||| | |||
Sbjct: 931  agcagcaagaagagtgcaacagcccacaaaacatactggtatgctctgtactttcgtggt 872

                                                                        
Query: 420  tgatcggtctgaggcaactcatggcgttccatccaaccaaattgaggccttgctagcagc 479
            ||||  ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| 
Sbjct: 871  tgattagtctgaggcaactcatgacgttccatccaaccaaattgaggtcttgccagcagg 812

                                                                        
Query: 480  acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgc 539
            ||||| |||| |||||| || | ||| || ||||||||||| ||||| |||||||| || 
Sbjct: 811  acaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaaagttatcagcgtga 752

                       
Query: 540  ggtagtatccc 550
            |||||||||||
Sbjct: 751  ggtagtatccc 741



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>dbj|AK061056.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H06, full
            insert sequence
          Length = 1327

 Score =  204 bits (103), Expect = 2e-49
 Identities = 259/311 (83%)
 Strand = Plus / Minus

                                                                        
Query: 240  atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299
            |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 1051 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 992

                                                                        
Query: 300  cagccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacc 359
            || |||||||| || ||||| ||||||||||||||| ||||| | | |||| ||||||| 
Sbjct: 991  caaccatcgtttccattcttccccttgaaaagcatcaccagggcaatcacaaacccaact 932

                                                                        
Query: 360  agcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggt 419
            ||||| ||||  |||||  |  |||||| | ||||||||||     |||||||| | |||
Sbjct: 931  agcagcaagaagagtgcaacagcccacaaaacatactggtatgctctgtactttcgtggt 872

                                                                        
Query: 420  tgatcggtctgaggcaactcatggcgttccatccaaccaaattgaggccttgctagcagc 479
            ||||  ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| 
Sbjct: 871  tgattagtctgaggcaactcatgacgttccatccaaccaaattgaggtcttgccagcagg 812

                                                                        
Query: 480  acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgc 539
            ||||| |||| |||||| || | ||| || ||||||||||| ||||| |||||||| || 
Sbjct: 811  acaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaaagttatcagcgtga 752

                       
Query: 540  ggtagtatccc 550
            |||||||||||
Sbjct: 751  ggtagtatccc 741



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>gb|L13655.1|SCFMEMPRO Saccharum hybrid cultivar H65-7052 membrane protein mRNA, complete
            cds
          Length = 1279

 Score =  139 bits (70), Expect = 1e-29
 Identities = 250/310 (80%)
 Strand = Plus / Minus

                                                                        
Query: 241  tctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggc 300
            |||| ||| ||||||||||| | || || |||||||||||||||||  ||||||||||||
Sbjct: 1101 tctaggtgttgcacttccacttagatgttggcacgcagttcaggtagtggcaccagtggc 1042

                                                                        
Query: 301  agccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacca 360
            |||||||||| || ||||| || |||||||||||| ||||    | |||| ||||||| |
Sbjct: 1041 agccatcgttcccattcttccctttgaaaagcatcaccagtgaaatcacaaacccaacta 982

                                                                        
Query: 361  gcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggtt 420
             ||| ||||  |||||| |  |||||| |  |||||||||    |||||||| || ||||
Sbjct: 981  acagcaagacgagtgccacaacccacaaaatatactggtatgctttgtacttgggaggtt 922

                                                                        
Query: 421  gatcggtctgaggcaactcatggcgttccatccaaccaaattgaggccttgctagcagca 480
            | |  ||||| |||||||||||||| |||||||| | ||||||||||||||| | ||| |
Sbjct: 921  ggttagtctgtggcaactcatggcgctccatccagctaaattgaggccttgccaacagaa 862

                                                                        
Query: 481  caaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcg 540
            |||| || || ||||| || | | |||| ||||||||||| ||||| || ||| | || |
Sbjct: 861  caaaccccaagaggaaacccgtcgcgaatccaccaatgtgagcaaagttgtcaacgtgag 802

                      
Query: 541  gtagtatccc 550
            ||||||||||
Sbjct: 801  gtagtatccc 792



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  137 bits (69), Expect = 4e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                            
Query: 406      tgtactttgggggttgatcggtctgaggcaactcatggcgttccatccaaccaaattgag 465
                |||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 27369456 tgtactttcgtggttgattagtctgaggcaactcatgacgttccatccaaccaaattgag 27369515

                                                                            
Query: 466      gccttgctagcagcacaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaa 525
                | ||||| ||||| ||||| |||| |||||| || | ||| || ||||||||||| ||||
Sbjct: 27369516 gtcttgccagcaggacaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaa 27369575

                                         
Query: 526      aattatcagcatgcggtagtatccc 550
                | |||||||| || |||||||||||
Sbjct: 27369576 agttatcagcgtgaggtagtatccc 27369600



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                            
Query: 240      atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299
                |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 27369086 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 27369145

                                                          
Query: 300      cagccatcgttgccgttctttcccttgaaaagcatcgccagg 341
                || |||||||| || ||||| ||||||||||||||| |||||
Sbjct: 27369146 caaccatcgtttccattcttccccttgaaaagcatcaccagg 27369187



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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score =  137 bits (69), Expect = 4e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                         
Query: 406   tgtactttgggggttgatcggtctgaggcaactcatggcgttccatccaaccaaattgag 465
             |||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70983 tgtactttcgtggttgattagtctgaggcaactcatgacgttccatccaaccaaattgag 71042

                                                                         
Query: 466   gccttgctagcagcacaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaa 525
             | ||||| ||||| ||||| |||| |||||| || | ||| || ||||||||||| ||||
Sbjct: 71043 gtcttgccagcaggacaaacccaagaaggaatccagtcacaaatccaccaatgtgtgcaa 71102

                                      
Query: 526   aattatcagcatgcggtagtatccc 550
             | |||||||| || |||||||||||
Sbjct: 71103 agttatcagcgtgaggtagtatccc 71127



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                         
Query: 240   atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299
             |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 70613 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 70672

                                                       
Query: 300   cagccatcgttgccgttctttcccttgaaaagcatcgccagg 341
             || |||||||| || ||||| ||||||||||||||| |||||
Sbjct: 70673 caaccatcgtttccattcttccccttgaaaagcatcaccagg 70714



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>gb|AY105232.1| Zea mays PCO078286 mRNA sequence
          Length = 593

 Score =  131 bits (66), Expect = 3e-27
 Identities = 228/282 (80%)
 Strand = Plus / Minus

                                                                       
Query: 251 gcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgtt 310
           ||||||||| |||||||| || ||||||||||||||  |||||||||||||||  |||||
Sbjct: 289 gcacttccatctggacgttggtacgcagttcaggtaatggcaccagtggcagctgtcgtt 230

                                                                       
Query: 311 gccgttctttcccttgaaaagcatcgccaggccgaccacatacccaaccagcagaaagag 370
            || ||||| ||| |||| |||||  ||| |   |   || ||||||| | ||| |||||
Sbjct: 229 cccattcttacccgtgaagagcatgaccaagataatggcaaacccaactaccagcaagag 170

                                                                       
Query: 371 cagtgccgcgccccacagagcatactggtacatcttgtactttgggggttgatcggtctg 430
            ||||| ||  ||||||   |||||||||||   ||||||||||| ||||||   |||||
Sbjct: 169 gagtgcagcaacccacaagacatactggtacgatttgtactttggaggttgactagtctg 110

                                                                       
Query: 431 aggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaa 490
           ||| | |||   |||||||||||||||||||||||| ||||| |||||||||||||||| 
Sbjct: 109 aggtagctcgctgcgttccatccaaccaaattgaggtcttgccagcagcacaaatccaat 50

                                                     
Query: 491 aaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532
           ||| ||||| ||  | || ||||||||||| |||||||||||
Sbjct: 49  aagaaacccagaagcaaatccaccaatgtgggcaaaattatc 8



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>gb|AY105455.1| Zea mays PCO077618 mRNA sequence
          Length = 1387

 Score =  125 bits (63), Expect = 2e-25
 Identities = 240/299 (80%)
 Strand = Plus / Minus

                                                                        
Query: 252  cacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgttg 311
            ||||||||| |||| || |||||||||||||||||  ||||||| |||||||||||||| 
Sbjct: 1144 cacttccacttggatgttggcacgcagttcaggtagtggcaccaatggcagccatcgttc 1085

                                                                        
Query: 312  ccgttctttcccttgaaaagcatcgccaggccgaccacatacccaaccagcagaaagagc 371
            |||||||| || |||||||||||| ||||    | |||| ||||||| | ||| ||||  
Sbjct: 1084 ccgttcttccctttgaaaagcatcaccagtgaaatcacaaacccaactaacagcaagacg 1025

                                                                        
Query: 372  agtgccgcgccccacagagcatactggtacatcttgtactttgggggttgatcggtctga 431
            |||||| |  |||||| |  |||||||||    |||||||| || ||||| |  || || 
Sbjct: 1024 agtgccacaacccacaaaatatactggtatgctttgtacttgggaggttggttagtgtgt 965

                                                                        
Query: 432  ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491
            ||||||||||| | ||||||||| | ||||||||||||||| | ||| ||||| || || 
Sbjct: 964  ggcaactcatgactttccatccagctaaattgaggccttgccaacagaacaaaacccaag 905

                                                                       
Query: 492  aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550
            ||||| || | | |||| ||||||||||| ||||| || ||| | || |||||||||||
Sbjct: 904  aggaaacccgtcgcgaatccaccaatgtgagcaaagttgtcaacgtgaggtagtatccc 846



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                            
Query: 432      ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491
                ||||||||||| ||||||||||||||||| || |||||||| | ||  |||||||| |||
Sbjct: 20249060 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 20249119

                                                                           
Query: 492      aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550
                ||||| || | ||| || ||||| || || ||||| ||||| ||||| |||||||||||
Sbjct: 20249120 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 20249178



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                            
Query: 250      tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309
                ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 20248680 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 20248739

                                          
Query: 310      tgccgttctttcccttgaaaagcatc 335
                | || ||||| |||||||| ||||||
Sbjct: 20248740 ttccattcttacccttgaagagcatc 20248765



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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                         
Query: 432   ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491
             ||||||||||| ||||||||||||||||| || |||||||| | ||  |||||||| |||
Sbjct: 28187 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 28246

                                                                        
Query: 492   aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550
             ||||| || | ||| || ||||| || || ||||| ||||| ||||| |||||||||||
Sbjct: 28247 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 28305



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                         
Query: 250   tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309
             ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 27807 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 27866

                                       
Query: 310   tgccgttctttcccttgaaaagcatc 335
             | || ||||| |||||||| ||||||
Sbjct: 27867 ttccattcttacccttgaagagcatc 27892



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>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0047P18
          Length = 169128

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                          
Query: 432    ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491
              ||||||||||| ||||||||||||||||| || |||||||| | ||  |||||||| |||
Sbjct: 142560 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 142619

                                                                         
Query: 492    aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550
              ||||| || | ||| || ||||| || || ||||| ||||| ||||| |||||||||||
Sbjct: 142620 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 142678



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                          
Query: 250    tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309
              ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 142180 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 142239

                                        
Query: 310    tgccgttctttcccttgaaaagcatc 335
              | || ||||| |||||||| ||||||
Sbjct: 142240 ttccattcttacccttgaagagcatc 142265



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>dbj|AK071290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087M04, full
           insert sequence
          Length = 1263

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                       
Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491
           ||||||||||| ||||||||||||||||| || |||||||| | ||  |||||||| |||
Sbjct: 878 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 819

                                                                      
Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550
           ||||| || | ||| || ||||| || || ||||| ||||| ||||| |||||||||||
Sbjct: 818 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 760



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 250  tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309
            ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 1060 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 1001

                                      
Query: 310  tgccgttctttcccttgaaaagcatc 335
            | || ||||| |||||||| ||||||
Sbjct: 1000 ttccattcttacccttgaagagcatc 975



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>dbj|AK059988.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H11, full
           insert sequence
          Length = 1266

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                       
Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491
           ||||||||||| ||||||||||||||||| || |||||||| | ||  |||||||| |||
Sbjct: 860 ggcaactcatgtcgttccatccaaccaaactgtggccttgccaacaaaacaaatcccaaa 801

                                                                      
Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550
           ||||| || | ||| || ||||| || || ||||| ||||| ||||| |||||||||||
Sbjct: 800 aggaagcccgtcacaaatccaccgatatgagcaaagttatcggcatgaggtagtatccc 742



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 250  tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 309
            ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 1042 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 983

                                      
Query: 310  tgccgttctttcccttgaaaagcatc 335
            | || ||||| |||||||| ||||||
Sbjct: 982  ttccattcttacccttgaagagcatc 957



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>gb|BT019048.1| Zea mays clone Contig569.F mRNA sequence
          Length = 928

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 432 ggcaactcatggcgttccatccaaccaaattgaggccttgctagcagcacaaatccaaaa 491
           ||||||||||| | ||||||||| | ||||||||||||||| | ||| ||||| || || 
Sbjct: 419 ggcaactcatgactttccatccagctaaattgaggccttgccaacagaacaaaacccaag 478

                                                                      
Query: 492 aggaacccggacacgaacccaccaatgtgcgcaaaattatcagcatgcggtagtatccc 550
           |||||  | | | |||| ||||||||||| ||||| || ||| | || |||||||||||
Sbjct: 479 aggaaatccgtcgcgaatccaccaatgtgagcaaagttgtcaacgtgaggtagtatccc 537



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>emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M21,
              complete sequence
          Length = 151218

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                          
Query: 240    atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299
              |||||| | ||||||||||| ||||| || |||| |||||||| |||  |||| ||||| 
Sbjct: 100774 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 100833

                                                  
Query: 300    cagccatcgttgccgttctttcccttgaaaagcatc 335
              || |||||||| ||  |||| ||||| |||||||||
Sbjct: 100834 caaccatcgtttccagtcttccccttcaaaagcatc 100869



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                            
Query: 240      atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299
                |||||| | ||||||||||| ||||| || |||| |||||||| |||  |||| ||||| 
Sbjct: 13106961 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 13107020

                                                    
Query: 300      cagccatcgttgccgttctttcccttgaaaagcatc 335
                || |||||||| ||  |||| ||||| |||||||||
Sbjct: 13107021 caaccatcgtttccagtcttccccttcaaaagcatc 13107056



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>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23,
             complete sequence
          Length = 165683

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                         
Query: 240   atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 299
             |||||| | ||||||||||| ||||| || |||| |||||||| |||  |||| ||||| 
Sbjct: 39171 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 39230

                                                 
Query: 300   cagccatcgttgccgttctttcccttgaaaagcatc 335
             || |||||||| ||  |||| ||||| |||||||||
Sbjct: 39231 caaccatcgtttccagtcttccccttcaaaagcatc 39266



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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0003C04 map S10003, complete sequence
          Length = 119238

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 480   acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532
             |||||||||| |||||||||||| |  |  || |||||||||||||| |||||
Sbjct: 28545 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 28597



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>dbj|AB200415.1| Siphonosoma cumanense HTK gene for hypotaurocyamine kinase,
           complete cds
          Length = 2524

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 439 catggcgttccatccaaccaa 459
           |||||||||||||||||||||
Sbjct: 257 catggcgttccatccaaccaa 277



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>dbj|AB186407.1| Siphonosoma cumanense mRNA for hypotaurocyamine kinase, complete
           cds
          Length = 1668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 439 catggcgttccatccaaccaa 459
           |||||||||||||||||||||
Sbjct: 310 catggcgttccatccaaccaa 330



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 480      acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532
                |||||||||| |||||||||||| |  |  || |||||||||||||| |||||
Sbjct: 28223444 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 28223496



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>dbj|AK109134.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E01, full
           insert sequence
          Length = 1422

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 480 acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532
           |||||||||| |||||||||||| |  |  || |||||||||||||| |||||
Sbjct: 847 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 795



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 480      acaaatccaaaaaggaacccggacacgaacccaccaatgtgcgcaaaattatc 532
                |||||||||| |||||||||||| |  |  || |||||||||||||| |||||
Sbjct: 28208322 acaaatccaagaaggaacccggatataaggcccccaatgtgcgcaaagttatc 28208374



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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    ggcagccatcgttgccgttc 317
              ||||||||||||||||||||
Sbjct: 109123 ggcagccatcgttgccgttc 109142



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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    ggcagccatcgttgccgttc 317
              ||||||||||||||||||||
Sbjct: 108932 ggcagccatcgttgccgttc 108951



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>emb|AL365356.13| Human DNA sequence from clone RP11-336A10 on chromosome 10 Contains the
             ASB13 gene for ankyrin repeat and SOCS box-containing 13,
             the 5' end of gene FLJ20360 (KIAA2006 FLJ34073 FLJ12904
             FLJ23361 FLJ21109), three novel genes, a ribosomal protein
             L23a (RPL23A) pseudogene, the 5' end of a novel gene and
             two CpG islands, complete sequence
          Length = 167676

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   ctgtaaacacacaataaaaa 193
             ||||||||||||||||||||
Sbjct: 84067 ctgtaaacacacaataaaaa 84086



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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    agcagtgccgcgccccacag 388
              ||||||||||||||||||||
Sbjct: 120193 agcagtgccgcgccccacag 120174



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>dbj|AP004237.1| Proteus vulgaris plasmid Rts1 DNA, complete sequence
          Length = 217182

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 513    ccaatgtgcgcaaaattatcagca 536
              ||||||||||| ||||||||||||
Sbjct: 144793 ccaatgtgcgcgaaattatcagca 144816



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>gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete sequence
          Length = 159875

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   gtaaacacacaataaaaatg 195
             ||||||||||||||||||||
Sbjct: 97098 gtaaacacacaataaaaatg 97117



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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    ccagtggcagccatcgttgc 312
              ||||||||||||||||||||
Sbjct: 202876 ccagtggcagccatcgttgc 202857



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>emb|AL160161.10| Human DNA sequence from clone RP1-188D3 on chromosome 6, complete
             sequence
          Length = 72159

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   acaataaaaatggctctccg 203
             ||||||||||||||||||||
Sbjct: 29267 acaataaaaatggctctccg 29286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,015,826
Number of Sequences: 3902068
Number of extensions: 4015826
Number of successful extensions: 63621
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 63462
Number of HSP's gapped (non-prelim): 157
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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