| Clone Name | rbaal1o10 |
|---|---|
| Clone Library Name | barley_pub |
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 337 bits (863), Expect = 3e-92 Identities = 157/158 (99%), Positives = 157/158 (99%) Frame = -1 Query: 676 TAHRVXGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQC 497 TAHRV GYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQC Sbjct: 211 TAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQC 270 Query: 496 VNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLF 317 VNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLF Sbjct: 271 VNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLF 330 Query: 316 EYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 203 EYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS Sbjct: 331 EYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 55.1 bits (131), Expect = 2e-07 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%) Frame = -1 Query: 652 SSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA----- 488 S Y+ S + RE+ + L +Y VD GH+H YER PL + ++ Sbjct: 463 SHRPMYSSAYSSYQLHVREAFEGLLLKYGVDAYLSGHIHWYERLYPLGANGTIDTAAIVN 522 Query: 487 DKTHYSGTMNGTIFVVAGGGG-----SHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSL 323 + T+Y+ ++ G G S S ++ YGF+KLT FN ++L Sbjct: 523 NNTYYAHNGKSITHIINGMAGNIESHSEFSDGEGLTNITALLDKVHYGFSKLTIFNETAL 582 Query: 322 LFEYMKSSDGKVYDSFTI 269 +E ++ DG V DS T+ Sbjct: 583 KWELIRGDDGTVGDSLTL 600
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 43.5 bits (101), Expect = 6e-04 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 9/112 (8%) Frame = -1 Query: 601 RESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVV 440 R ++ + +Y+VD+ + GHVH YER+ + N +G + I++ Sbjct: 337 RVMYEQWFVKYKVDVVFAGHVHAYERS-----ERVSNIAYNIVNGLCEPISDESAPIYIT 391 Query: 439 AGGGGSH---LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 293 G GG+ L+ PK+S FR+ +G L N + F + ++ DG Sbjct: 392 IGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDG 443
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 40.8 bits (94), Expect = 0.004 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 11/127 (8%) Frame = -1 Query: 640 WYADQG-SFEEPEGRESLQKLW-QRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSG 467 WY + E E + + W +Y+VD+ + GHVH YER+ + N +G Sbjct: 316 WYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERS-----ERVSNVAYNIVNG 370 Query: 466 ------TMNGTIFVVAGGGGS---HLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFE 314 + +++ G GG+ ++ T PK+S FR+ +G N + + Sbjct: 371 LCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYS 430 Query: 313 YMKSSDG 293 + ++ DG Sbjct: 431 WHRNQDG 437
>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654| Length = 529 Score = 39.3 bits (90), Expect = 0.011 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 38/120 (31%) Frame = -1 Query: 601 RESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-------DKTHYSGTMNGTIFV 443 R+ L+ +Y+VD+ GH H+YER+ PL + + ++ + GT+ + Sbjct: 366 RQEWLPLFDQYQVDLVVCGHEHHYERSHPLRGALGTDTRTPIPVDTRSDLIDSTRGTVHL 425 Query: 442 VAGGGGSHLSSYTTAIPK-----------------------------WSIFRDHD--YGF 356 V GGGG+ + P+ WS FRD D YGF Sbjct: 426 VIGGGGTSKPTNALLFPQPRCQVITGVGDFDPAIRRKPSIFVLEDAPWSAFRDRDNPYGF 485
>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)| (PAP) Length = 432 Score = 37.7 bits (86), Expect = 0.032 Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Frame = -1 Query: 619 FEEPEGRESLQKLW-QRYRVDIAYFGHVHNYERTCPLYQ-SQCVNADKTHYSGTMNGTIF 446 F E E + + W +Y+VD+ + GHVH YER+ + + + + ++ Sbjct: 297 FMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVY 356 Query: 445 VVAGGGGSH---LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSF 275 + G G++ S+ P++S FR+ +G N + F + ++ DG ++ Sbjct: 357 ITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEAD 416 Query: 274 TI 269 ++ Sbjct: 417 SV 418
>XRCC2_HUMAN (O43543) DNA-repair protein XRCC2 (X-ray repair cross-complementing| protein 2) Length = 280 Score = 33.9 bits (76), Expect = 0.46 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +1 Query: 34 RYKXIYNESYTHLLHDLFTSTYKLCS*P---ILLLNTCPQFYWMD 159 R+ +Y S THLL L++ CS P +L+L++ FYW+D Sbjct: 114 RFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLSAFYWID 158
>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2095 Score = 30.4 bits (67), Expect = 5.1 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Frame = -1 Query: 532 YERTCPLYQ--SQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 359 + ++ PL Q S VN ++ + G T G + T WS + + G Sbjct: 914 HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973 Query: 358 FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 179 + + N L + +S +G +YDS+ L +HD+C + S+ H Sbjct: 974 KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024 Query: 178 VNVMEGHPSNKIV 140 +++ + P K+V Sbjct: 1025 LSIEKSRPEVKLV 1037 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,515,357 Number of Sequences: 219361 Number of extensions: 1431108 Number of successful extensions: 3674 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3581 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3668 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)