>gb|AC140935.1| Gallus gallus BAC clone TAM31-90L17 from chromosome ul, complete
             sequence
          Length = 72054

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 409   aagaaccacagagcaaccaca 429
             |||||||||||||||||||||
Sbjct: 11917 aagaaccacagagcaaccaca 11897

>emb|BX936302.13| Zebrafish DNA sequence from clone CH211-191C10 in linkage group 3,
             complete sequence
          Length = 79049

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    ccaactttcccaaccaaggtacaa 55
             |||||| |||||||||||||||||
Sbjct: 66348 ccaactgtcccaaccaaggtacaa 66371

>gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome 18, complete sequence
          Length = 201282

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     agcatgatgatacaaaaacc 94
              ||||||||||||||||||||
Sbjct: 131051 agcatgatgatacaaaaacc 131070

>gb|AC101969.6| Mus musculus chromosome 17, clone RP24-259G8, complete sequence
          Length = 219711

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     agcattgcaagtaaaatgca 26
             ||||||||||||||||||||
Sbjct: 14506 agcattgcaagtaaaatgca 14487

>emb|BX901912.10| Zebrafish DNA sequence from clone CH211-212D2 in linkage group 1,
             complete sequence
          Length = 140289

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 353   agaacagaacattgtgaaaacatc 376
             |||||| |||||||||||||||||
Sbjct: 99308 agaacataacattgtgaaaacatc 99331

>emb|AL365229.13| Human DNA sequence from clone RP11-723K16 on chromosome 20 Contains the
             5' end of the CDH4 gene for retinal cadherin 4 type 1
             (R-cadherin), complete sequence
          Length = 121478

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   ggacagaacagaacattgtg 368
             ||||||||||||||||||||
Sbjct: 41536 ggacagaacagaacattgtg 41555

>emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in linkage group 15,
             complete sequence
          Length = 211127

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    cagcatgatgatacaaaaac 93
             ||||||||||||||||||||
Sbjct: 71515 cagcatgatgatacaaaaac 71534

>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15,
              complete sequence
          Length = 164638

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     cagcatgatgatacaaaaac 93
              ||||||||||||||||||||
Sbjct: 127460 cagcatgatgatacaaaaac 127479

>gb|AF523525.1| Gavia immer clone TUMWGi6.1.8 microsatellite sequence
          Length = 479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 agagacaggctcacatctta 267
           ||||||||||||||||||||
Sbjct: 219 agagacaggctcacatctta 238

>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15,
             complete sequence
          Length = 182149

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    cagcatgatgatacaaaaac 93
             ||||||||||||||||||||
Sbjct: 18730 cagcatgatgatacaaaaac 18749

>gb|AC093167.11| Homo sapiens Xp BAC RP11-593P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 75001

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aaatacataaataaggagaa 207
             ||||||||||||||||||||
Sbjct: 15221 aaatacataaataaggagaa 15202

>emb|BX005188.15| Zebrafish DNA sequence from clone CH211-89H11, complete sequence
          Length = 202570

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    ggcaccaacacagagacagg 256
              ||||||||||||||||||||
Sbjct: 123380 ggcaccaacacagagacagg 123361

>emb|BX247950.12| Zebrafish DNA sequence from clone CH211-51G21, complete sequence
          Length = 172752

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    ggcaccaacacagagacagg 256
              ||||||||||||||||||||
Sbjct: 163530 ggcaccaacacagagacagg 163511

>gb|AC109822.5| Homo sapiens BAC clone RP11-633J12 from 2, complete sequence
          Length = 194235

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     agcatgatgatacaaaaacc 94
              ||||||||||||||||||||
Sbjct: 129695 agcatgatgatacaaaaacc 129714

>gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, complete sequence
          Length = 184139

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   acaggctcacatcttagagg 271
             ||||||||||||||||||||
Sbjct: 98897 acaggctcacatcttagagg 98916

>gb|AC157689.2| Xenopus tropicalis clone ISB1-171O22, complete sequence
          Length = 80070

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ggtacaaagacaacagtata 68
            ||||||||||||||||||||
Sbjct: 9679 ggtacaaagacaacagtata 9660

>emb|BX004779.16| Zebrafish DNA sequence from clone CH211-14K19 in linkage group 1,
             complete sequence
          Length = 196036

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 353   agaacagaacattgtgaaaacatc 376
             |||||| |||||||||||||||||
Sbjct: 44840 agaacataacattgtgaaaacatc 44863

>emb|CT027993.6| Mouse DNA sequence from clone RP24-82E21 on chromosome 17, complete
              sequence
          Length = 241014

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      agcattgcaagtaaaatgca 26
              ||||||||||||||||||||
Sbjct: 114441 agcattgcaagtaaaatgca 114422

>gb|AC171209.1| Mus musculus BAC clone RP23-105E1 from chromosome 17, complete sequence
          Length = 212184

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     agcattgcaagtaaaatgca 26
             ||||||||||||||||||||
Sbjct: 51960 agcattgcaagtaaaatgca 51941

>gb|AC170901.3| Mus musculus BAC clone RP23-318L14 from chromosome 17, complete
            sequence
          Length = 207623

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    agcattgcaagtaaaatgca 26
            ||||||||||||||||||||
Sbjct: 9346 agcattgcaagtaaaatgca 9365

>emb|AJ421479.1| Mus musculus X-inactivation center region; segment 2/3
          Length = 252150

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tcatgatgcatcacaacagt 132
              ||||||||||||||||||||
Sbjct: 247239 tcatgatgcatcacaacagt 247220

>emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chromosome X, complete
             sequence
          Length = 229724

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tcatgatgcatcacaacagt 132
             ||||||||||||||||||||
Sbjct: 35009 tcatgatgcatcacaacagt 35028


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,245,473
Number of Sequences: 3902068
Number of extensions: 4245473
Number of successful extensions: 87146
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87102
Number of HSP's gapped (non-prelim): 44
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)