ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34p08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468409.1| Oryza sativa (japonica cultivar-group), mRNA 301 2e-78
2ref|XM_507048.1| PREDICTED Oryza sativa (japonica cultivar-group... 301 2e-78
3dbj|AK104135.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 2e-78
4dbj|AK072707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 2e-78
5gb|U46758.1|OSU46758 Oryza sativa potassium channel beta subunit... 301 2e-78
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
7dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
8dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
9emb|AJ225806.1|EDKCHBETA Egeria densa mRNA for potassium channel... 88 4e-14
10emb|AJ000999.1|STKCHANB Solanum tuberosum mRNA for putative beta... 62 3e-06
11dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 48 0.038
12ref|XM_475852.1| Oryza sativa (japonica cultivar-group), predic... 44 0.60
13gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
14gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
15gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
17gb|AC010562.5| Drosophila melanogaster 3L BAC RP98-21K18 (Roswel... 42 2.4
18gb|AE003560.3| Drosophila melanogaster chromosome 3L, section 25... 42 2.4
19gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.4
20emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 9.4
21emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on ch... 40 9.4
22emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in ... 40 9.4
23gb|AC099550.5| Homo sapiens BAC clone RP11-484O2 from 4, complet... 40 9.4
24gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, comple... 40 9.4
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
26dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 9.4
27dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
28gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 9.4

>ref|XM_468409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1290

 Score =  301 bits (152), Expect = 2e-78
 Identities = 368/440 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
            |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 1053 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 994

                                                                        
Query: 306  caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365
             | ||| || || || |||||||| | ||| || |||||||||||||| || || |||||
Sbjct: 993  gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 934

                                                                        
Query: 366  gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425
            | ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||||||
Sbjct: 933  gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 874

                                                                        
Query: 426  gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485
            |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| |||||
Sbjct: 873  gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 814

                                                                        
Query: 486  tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545
             || || || ||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 813  ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 754

                                                                        
Query: 546  aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605
            ||||| ||| |||| ||||||||| ||||||  ||| ||||||||||||||||| |||||
Sbjct: 753  aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 694

                                                                        
Query: 606  tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665
            |||||| |||||||||||||| || | |||||| || |||||||||||||  ||||||||
Sbjct: 693  tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 634

                                
Query: 666  ctcaaccttgtggcgggaga 685
             || ||||||||||| ||||
Sbjct: 633  ttccaccttgtggcgcgaga 614



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>ref|XM_507048.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.35 mRNA
          Length = 1331

 Score =  301 bits (152), Expect = 2e-78
 Identities = 368/440 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
            |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 1100 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 1041

                                                                        
Query: 306  caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365
             | ||| || || || |||||||| | ||| || |||||||||||||| || || |||||
Sbjct: 1040 gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 981

                                                                        
Query: 366  gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425
            | ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||||||
Sbjct: 980  gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 921

                                                                        
Query: 426  gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485
            |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| |||||
Sbjct: 920  gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 861

                                                                        
Query: 486  tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545
             || || || ||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 860  ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 801

                                                                        
Query: 546  aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605
            ||||| ||| |||| ||||||||| ||||||  ||| ||||||||||||||||| |||||
Sbjct: 800  aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 741

                                                                        
Query: 606  tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665
            |||||| |||||||||||||| || | |||||| || |||||||||||||  ||||||||
Sbjct: 740  tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 681

                                
Query: 666  ctcaaccttgtggcgggaga 685
             || ||||||||||| ||||
Sbjct: 680  ttccaccttgtggcgcgaga 661



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>dbj|AK104135.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E11, full
            insert sequence
          Length = 1290

 Score =  301 bits (152), Expect = 2e-78
 Identities = 368/440 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
            |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 1053 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 994

                                                                        
Query: 306  caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365
             | ||| || || || |||||||| | ||| || |||||||||||||| || || |||||
Sbjct: 993  gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 934

                                                                        
Query: 366  gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425
            | ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||||||
Sbjct: 933  gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 874

                                                                        
Query: 426  gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485
            |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| |||||
Sbjct: 873  gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 814

                                                                        
Query: 486  tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545
             || || || ||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 813  ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 754

                                                                        
Query: 546  aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605
            ||||| ||| |||| ||||||||| ||||||  ||| ||||||||||||||||| |||||
Sbjct: 753  aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 694

                                                                        
Query: 606  tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665
            |||||| |||||||||||||| || | |||||| || |||||||||||||  ||||||||
Sbjct: 693  tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 634

                                
Query: 666  ctcaaccttgtggcgggaga 685
             || ||||||||||| ||||
Sbjct: 633  ttccaccttgtggcgcgaga 614



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>dbj|AK072707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139I11, full
            insert sequence
          Length = 1329

 Score =  301 bits (152), Expect = 2e-78
 Identities = 368/440 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
            |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 1098 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 1039

                                                                        
Query: 306  caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365
             | ||| || || || |||||||| | ||| || |||||||||||||| || || |||||
Sbjct: 1038 gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 979

                                                                        
Query: 366  gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425
            | ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||||||
Sbjct: 978  gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 919

                                                                        
Query: 426  gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485
            |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| |||||
Sbjct: 918  gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 859

                                                                        
Query: 486  tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545
             || || || ||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 858  ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 799

                                                                        
Query: 546  aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605
            ||||| ||| |||| ||||||||| ||||||  ||| ||||||||||||||||| |||||
Sbjct: 798  aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 739

                                                                        
Query: 606  tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665
            |||||| |||||||||||||| || | |||||| || |||||||||||||  ||||||||
Sbjct: 738  tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 679

                                
Query: 666  ctcaaccttgtggcgggaga 685
             || ||||||||||| ||||
Sbjct: 678  ttccaccttgtggcgcgaga 659



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>gb|U46758.1|OSU46758 Oryza sativa potassium channel beta subunit protein (KOB1) mRNA,
            complete cds
          Length = 1293

 Score =  301 bits (152), Expect = 2e-78
 Identities = 368/440 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
            |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 1047 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 988

                                                                        
Query: 306  caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365
             | ||| || || || |||||||| | ||| || |||||||||||||| || || |||||
Sbjct: 987  gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 928

                                                                        
Query: 366  gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425
            | ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||||||
Sbjct: 927  gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 868

                                                                        
Query: 426  gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485
            |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| |||||
Sbjct: 867  gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 808

                                                                        
Query: 486  tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545
             || || || ||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 807  ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 748

                                                                        
Query: 546  aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605
            ||||| ||| |||| ||||||||| ||||||  ||| ||||||||||||||||| |||||
Sbjct: 747  aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 688

                                                                        
Query: 606  tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665
            |||||| |||||||||||||| || | |||||| || |||||||||||||  ||||||||
Sbjct: 687  tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 628

                                
Query: 666  ctcaaccttgtggcgggaga 685
             || ||||||||||| ||||
Sbjct: 627  ttccaccttgtggcgcgaga 608



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                            
Query: 528      cttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatattttcc 587
                |||||| || ||||||||||||| ||| |||| ||||||||| ||||||  ||| |||||
Sbjct: 35089268 cttgtaattttctagggcaaacctactatcagcaggtatatttcctttggcatactttcc 35089209

                                                                            
Query: 588      agtgagaactcctgaagctagaggactccatgtagtcaacccaatgccataagtactgta 647
                |||||||||||| ||||||||||| |||||||||||||| || | |||||| || |||||
Sbjct: 35089208 agtgagaactcccgaagctagagggctccatgtagtcaaacccaggccatacgtgctgta 35089149

                                  
Query: 648      aagaggtacaaactcaga 665
                ||||||||  ||||||||
Sbjct: 35089148 aagaggtaagaactcaga 35089131



 Score =  101 bits (51), Expect = 3e-18
 Identities = 138/167 (82%)
 Strand = Plus / Minus

                                                                            
Query: 363      ctggctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcacca 422
                |||| ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||
Sbjct: 35090600 ctggttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcacca 35090541

                                                                            
Query: 423      cgcgatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgtt 482
                ||||||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||
Sbjct: 35090540 cgcgatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccatt 35090481

                                                               
Query: 483      cactttcctaagcgtgtcgtcaaccagagacctgtttgccaggttct 529
                ||| || || || ||||||||||||||||| ||||| ||||||||||
Sbjct: 35090480 cacctttctcagtgtgtcgtcaaccagagatctgttggccaggttct 35090434



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 89/108 (82%)
 Strand = Plus / Minus

                                                                            
Query: 246      gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
                |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 35090838 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 35090779

                                                                
Query: 306      caggacctccggagtcagcagcgggacgacctccagggccttcatgtt 353
                 | ||| || || || |||||||| | ||| || ||||||||||||||
Sbjct: 35090778 gacgacttctggggttagcagcggaatgacatcgagggccttcatgtt 35090731



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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643F09
          Length = 161001

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                          
Query: 528    cttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatattttcc 587
              |||||| || ||||||||||||| ||| |||| ||||||||| ||||||  ||| |||||
Sbjct: 149609 cttgtaattttctagggcaaacctactatcagcaggtatatttcctttggcatactttcc 149550

                                                                          
Query: 588    agtgagaactcctgaagctagaggactccatgtagtcaacccaatgccataagtactgta 647
              |||||||||||| ||||||||||| |||||||||||||| || | |||||| || |||||
Sbjct: 149549 agtgagaactcccgaagctagagggctccatgtagtcaaacccaggccatacgtgctgta 149490

                                
Query: 648    aagaggtacaaactcaga 665
              ||||||||  ||||||||
Sbjct: 149489 aagaggtaagaactcaga 149472



 Score =  101 bits (51), Expect = 3e-18
 Identities = 138/167 (82%)
 Strand = Plus / Minus

                                                                          
Query: 363    ctggctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcacca 422
              |||| ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||
Sbjct: 150941 ctggttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcacca 150882

                                                                          
Query: 423    cgcgatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgtt 482
              ||||||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||
Sbjct: 150881 cgcgatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccatt 150822

                                                             
Query: 483    cactttcctaagcgtgtcgtcaaccagagacctgtttgccaggttct 529
              ||| || || || ||||||||||||||||| ||||| ||||||||||
Sbjct: 150821 cacctttctcagtgtgtcgtcaaccagagatctgttggccaggttct 150775



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 89/108 (82%)
 Strand = Plus / Minus

                                                                          
Query: 246    gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
              |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 151179 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 151120

                                                              
Query: 306    caggacctccggagtcagcagcgggacgacctccagggccttcatgtt 353
               | ||| || || || |||||||| | ||| || ||||||||||||||
Sbjct: 151119 gacgacttctggggttagcagcggaatgacatcgagggccttcatgtt 151072



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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                         
Query: 528   cttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatattttcc 587
             |||||| || ||||||||||||| ||| |||| ||||||||| ||||||  ||| |||||
Sbjct: 62431 cttgtaattttctagggcaaacctactatcagcaggtatatttcctttggcatactttcc 62372

                                                                         
Query: 588   agtgagaactcctgaagctagaggactccatgtagtcaacccaatgccataagtactgta 647
             |||||||||||| ||||||||||| |||||||||||||| || | |||||| || |||||
Sbjct: 62371 agtgagaactcccgaagctagagggctccatgtagtcaaacccaggccatacgtgctgta 62312

                               
Query: 648   aagaggtacaaactcaga 665
             ||||||||  ||||||||
Sbjct: 62311 aagaggtaagaactcaga 62294



 Score =  101 bits (51), Expect = 3e-18
 Identities = 138/167 (82%)
 Strand = Plus / Minus

                                                                         
Query: 363   ctggctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcacca 422
             |||| ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||
Sbjct: 63763 ctggttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcacca 63704

                                                                         
Query: 423   cgcgatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgtt 482
             ||||||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||
Sbjct: 63703 cgcgatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccatt 63644

                                                            
Query: 483   cactttcctaagcgtgtcgtcaaccagagacctgtttgccaggttct 529
             ||| || || || ||||||||||||||||| ||||| ||||||||||
Sbjct: 63643 cacctttctcagtgtgtcgtcaaccagagatctgttggccaggttct 63597



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 89/108 (82%)
 Strand = Plus / Minus

                                                                         
Query: 246   gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305
             |||||||||||| ||||||  |||||| |||||||| ||||  ||||| |||||||| ||
Sbjct: 64001 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 63942

                                                             
Query: 306   caggacctccggagtcagcagcgggacgacctccagggccttcatgtt 353
              | ||| || || || |||||||| | ||| || ||||||||||||||
Sbjct: 63941 gacgacttctggggttagcagcggaatgacatcgagggccttcatgtt 63894



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>emb|AJ225806.1|EDKCHBETA Egeria densa mRNA for potassium channel beta subunit
          Length = 984

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 523 aggttcttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatat 582
           |||||||||||||| || |  ||||||||||| |||| |||||| || |||||| | |||
Sbjct: 713 aggttcttgtagttctccaaagcaaaccgactgtcagcaggtatgtttcctttggtgtat 654

                                                                   
Query: 583 tttccagtgagaactcctgaagctagaggactccatgtagtcaacccaatgccata 638
           |||||||| || ||||| ||||| || |||||||||||||| |  |||||||||||
Sbjct: 653 tttccagttagtactccagaagccagtggactccatgtagtaaggccaatgccata 598



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>emb|AJ000999.1|STKCHANB Solanum tuberosum mRNA for putative beta-subunit of K+ channel
          Length = 1203

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 578 tatattttccagtgagaactcctgaagctagaggactccatgt 620
           ||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 668 tatattttccagtcagaacgcctgaagcgagaggactccatgt 626



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 292     gcctcgatcttctccaggacctccggagtcag 323
               |||||||||||||||||| ||||||| |||||
Sbjct: 2745672 gcctcgatcttctccaggtcctccggcgtcag 2745703



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>ref|XM_475852.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1095

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 25 cacgggacagcagcacacgcag 46
          ||||||||||||||||||||||
Sbjct: 91 cacgggacagcagcacacgcag 70



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>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
             complete sequence
          Length = 177861

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 25    cacgggacagcagcacacgcag 46
             ||||||||||||||||||||||
Sbjct: 28626 cacgggacagcagcacacgcag 28605



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>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
              complete sequence
          Length = 141715

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 25     cacgggacagcagcacacgcag 46
              ||||||||||||||||||||||
Sbjct: 103811 cacgggacagcagcacacgcag 103790



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>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
              complete sequence
          Length = 166218

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 25     cacgggacagcagcacacgcag 46
              ||||||||||||||||||||||
Sbjct: 128314 cacgggacagcagcacacgcag 128293



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 25       cacgggacagcagcacacgcag 46
                ||||||||||||||||||||||
Sbjct: 27097230 cacgggacagcagcacacgcag 27097209



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>gb|AC010562.5| Drosophila melanogaster 3L BAC RP98-21K18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 181528

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 490   ctaagcgtgtcgtcaaccaga 510
             |||||||||||||||||||||
Sbjct: 72028 ctaagcgtgtcgtcaaccaga 72008



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>gb|AE003560.3| Drosophila melanogaster chromosome 3L, section 25 of 83 of the complete
              sequence
          Length = 285494

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 490    ctaagcgtgtcgtcaaccaga 510
              |||||||||||||||||||||
Sbjct: 156701 ctaagcgtgtcgtcaaccaga 156721



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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     agcgggacgacctccagggc 344
               ||||||||||||||||||||
Sbjct: 2108047 agcgggacgacctccagggc 2108028



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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 268     cgcttgggcttgctctggat 287
               ||||||||||||||||||||
Sbjct: 1509558 cgcttgggcttgctctggat 1509577



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>emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on chromosome 11 Contains a
             aldo-keto reductase family 1 member B3 (aldose reductase)
             (Akr1b3) pseudogene, the gene for a novel protein similar
             to human methionine adenosyltransferase II beta (MAT2B),
             the Hmmr gene for hyaluronan mediated motility receptor
             (RHAMM), the gene for a novel protein (D11Ertd603e), the
             Ccng1 gene for cyclin G1 and three CpG islands, complete
             sequence
          Length = 193551

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   agacctgtttgccaggttct 529
             ||||||||||||||||||||
Sbjct: 29637 agacctgtttgccaggttct 29618



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>emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in linkage group 2, complete
              sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     acaacaaaatgtttcacacg 117
              ||||||||||||||||||||
Sbjct: 109056 acaacaaaatgtttcacacg 109075



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>gb|AC099550.5| Homo sapiens BAC clone RP11-484O2 from 4, complete sequence
          Length = 145479

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 631  atgccataagtactgtaaag 650
            ||||||||||||||||||||
Sbjct: 9565 atgccataagtactgtaaag 9584



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>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence
          Length = 144511

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   ggaaaaaatcccaccatgtg 211
             ||||||||||||||||||||
Sbjct: 65537 ggaaaaaatcccaccatgtg 65518



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      aaaaatcccaccatgtggag 214
                ||||||||||||||||||||
Sbjct: 16548368 aaaaatcccaccatgtggag 16548349



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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     ccagggccttcatgttctcc 357
               ||||||||||||||||||||
Sbjct: 1068533 ccagggccttcatgttctcc 1068552



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>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_E02
          Length = 159669

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   aaaaatcccaccatgtggag 214
             ||||||||||||||||||||
Sbjct: 20192 aaaaatcccaccatgtggag 20173



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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    ccagggccttcatgttctcc 357
              ||||||||||||||||||||
Sbjct: 741511 ccagggccttcatgttctcc 741530


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,940,748
Number of Sequences: 3902068
Number of extensions: 4940748
Number of successful extensions: 88319
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87989
Number of HSP's gapped (non-prelim): 330
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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