| Clone Name | rbags34p08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1290 Score = 301 bits (152), Expect = 2e-78 Identities = 368/440 (83%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 1053 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 994 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365 | ||| || || || |||||||| | ||| || |||||||||||||| || || ||||| Sbjct: 993 gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 934 Query: 366 gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425 | ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 933 gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 874 Query: 426 gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485 |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||||| Sbjct: 873 gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 814 Query: 486 tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545 || || || ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 813 ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 754 Query: 546 aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605 ||||| ||| |||| ||||||||| |||||| ||| ||||||||||||||||| ||||| Sbjct: 753 aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 694 Query: 606 tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665 |||||| |||||||||||||| || | |||||| || ||||||||||||| |||||||| Sbjct: 693 tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 634 Query: 666 ctcaaccttgtggcgggaga 685 || ||||||||||| |||| Sbjct: 633 ttccaccttgtggcgcgaga 614
>ref|XM_507048.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.35 mRNA Length = 1331 Score = 301 bits (152), Expect = 2e-78 Identities = 368/440 (83%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 1100 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 1041 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365 | ||| || || || |||||||| | ||| || |||||||||||||| || || ||||| Sbjct: 1040 gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 981 Query: 366 gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425 | ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 980 gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 921 Query: 426 gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485 |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||||| Sbjct: 920 gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 861 Query: 486 tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545 || || || ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 860 ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 801 Query: 546 aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605 ||||| ||| |||| ||||||||| |||||| ||| ||||||||||||||||| ||||| Sbjct: 800 aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 741 Query: 606 tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665 |||||| |||||||||||||| || | |||||| || ||||||||||||| |||||||| Sbjct: 740 tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 681 Query: 666 ctcaaccttgtggcgggaga 685 || ||||||||||| |||| Sbjct: 680 ttccaccttgtggcgcgaga 661
>dbj|AK104135.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E11, full insert sequence Length = 1290 Score = 301 bits (152), Expect = 2e-78 Identities = 368/440 (83%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 1053 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 994 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365 | ||| || || || |||||||| | ||| || |||||||||||||| || || ||||| Sbjct: 993 gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 934 Query: 366 gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425 | ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 933 gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 874 Query: 426 gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485 |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||||| Sbjct: 873 gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 814 Query: 486 tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545 || || || ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 813 ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 754 Query: 546 aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605 ||||| ||| |||| ||||||||| |||||| ||| ||||||||||||||||| ||||| Sbjct: 753 aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 694 Query: 606 tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665 |||||| |||||||||||||| || | |||||| || ||||||||||||| |||||||| Sbjct: 693 tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 634 Query: 666 ctcaaccttgtggcgggaga 685 || ||||||||||| |||| Sbjct: 633 ttccaccttgtggcgcgaga 614
>dbj|AK072707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139I11, full insert sequence Length = 1329 Score = 301 bits (152), Expect = 2e-78 Identities = 368/440 (83%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 1098 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 1039 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365 | ||| || || || |||||||| | ||| || |||||||||||||| || || ||||| Sbjct: 1038 gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 979 Query: 366 gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425 | ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 978 gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 919 Query: 426 gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485 |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||||| Sbjct: 918 gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 859 Query: 486 tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545 || || || ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 858 ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 799 Query: 546 aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605 ||||| ||| |||| ||||||||| |||||| ||| ||||||||||||||||| ||||| Sbjct: 798 aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 739 Query: 606 tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665 |||||| |||||||||||||| || | |||||| || ||||||||||||| |||||||| Sbjct: 738 tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 679 Query: 666 ctcaaccttgtggcgggaga 685 || ||||||||||| |||| Sbjct: 678 ttccaccttgtggcgcgaga 659
>gb|U46758.1|OSU46758 Oryza sativa potassium channel beta subunit protein (KOB1) mRNA, complete cds Length = 1293 Score = 301 bits (152), Expect = 2e-78 Identities = 368/440 (83%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 1047 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 988 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgttctccacgatctg 365 | ||| || || || |||||||| | ||| || |||||||||||||| || || ||||| Sbjct: 987 gacgacttctggggttagcagcggaatgacatcgagggccttcatgttttcaacaatctg 928 Query: 366 gctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcaccacgc 425 | ||||||| ||||| || |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 927 gttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcaccacgc 868 Query: 426 gatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgttcac 485 |||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| ||||| Sbjct: 867 gatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccattcac 808 Query: 486 tttcctaagcgtgtcgtcaaccagagacctgtttgccaggttcttgtagttatctagggc 545 || || || ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 807 ctttctcagtgtgtcgtcaaccagagatctgttggccaggttcttgtaattttctagggc 748 Query: 546 aaaccgactttcaggaggtatattgcctttgctatattttccagtgagaactcctgaagc 605 ||||| ||| |||| ||||||||| |||||| ||| ||||||||||||||||| ||||| Sbjct: 747 aaacctactatcagcaggtatatttcctttggcatactttccagtgagaactcccgaagc 688 Query: 606 tagaggactccatgtagtcaacccaatgccataagtactgtaaagaggtacaaactcaga 665 |||||| |||||||||||||| || | |||||| || ||||||||||||| |||||||| Sbjct: 687 tagagggctccatgtagtcaaacccaggccatacgtgctgtaaagaggtaagaactcaga 628 Query: 666 ctcaaccttgtggcgggaga 685 || ||||||||||| |||| Sbjct: 627 ttccaccttgtggcgcgaga 608
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 3e-27 Identities = 120/138 (86%) Strand = Plus / Minus Query: 528 cttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatattttcc 587 |||||| || ||||||||||||| ||| |||| ||||||||| |||||| ||| ||||| Sbjct: 35089268 cttgtaattttctagggcaaacctactatcagcaggtatatttcctttggcatactttcc 35089209 Query: 588 agtgagaactcctgaagctagaggactccatgtagtcaacccaatgccataagtactgta 647 |||||||||||| ||||||||||| |||||||||||||| || | |||||| || ||||| Sbjct: 35089208 agtgagaactcccgaagctagagggctccatgtagtcaaacccaggccatacgtgctgta 35089149 Query: 648 aagaggtacaaactcaga 665 |||||||| |||||||| Sbjct: 35089148 aagaggtaagaactcaga 35089131 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 363 ctggctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcacca 422 |||| ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||| Sbjct: 35090600 ctggttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcacca 35090541 Query: 423 cgcgatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgtt 482 ||||||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| || Sbjct: 35090540 cgcgatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccatt 35090481 Query: 483 cactttcctaagcgtgtcgtcaaccagagacctgtttgccaggttct 529 ||| || || || ||||||||||||||||| ||||| |||||||||| Sbjct: 35090480 cacctttctcagtgtgtcgtcaaccagagatctgttggccaggttct 35090434 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 35090838 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 35090779 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgtt 353 | ||| || || || |||||||| | ||| || |||||||||||||| Sbjct: 35090778 gacgacttctggggttagcagcggaatgacatcgagggccttcatgtt 35090731
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 131 bits (66), Expect = 3e-27 Identities = 120/138 (86%) Strand = Plus / Minus Query: 528 cttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatattttcc 587 |||||| || ||||||||||||| ||| |||| ||||||||| |||||| ||| ||||| Sbjct: 149609 cttgtaattttctagggcaaacctactatcagcaggtatatttcctttggcatactttcc 149550 Query: 588 agtgagaactcctgaagctagaggactccatgtagtcaacccaatgccataagtactgta 647 |||||||||||| ||||||||||| |||||||||||||| || | |||||| || ||||| Sbjct: 149549 agtgagaactcccgaagctagagggctccatgtagtcaaacccaggccatacgtgctgta 149490 Query: 648 aagaggtacaaactcaga 665 |||||||| |||||||| Sbjct: 149489 aagaggtaagaactcaga 149472 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 363 ctggctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcacca 422 |||| ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||| Sbjct: 150941 ctggttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcacca 150882 Query: 423 cgcgatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgtt 482 ||||||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| || Sbjct: 150881 cgcgatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccatt 150822 Query: 483 cactttcctaagcgtgtcgtcaaccagagacctgtttgccaggttct 529 ||| || || || ||||||||||||||||| ||||| |||||||||| Sbjct: 150821 cacctttctcagtgtgtcgtcaaccagagatctgttggccaggttct 150775 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 151179 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 151120 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgtt 353 | ||| || || || |||||||| | ||| || |||||||||||||| Sbjct: 151119 gacgacttctggggttagcagcggaatgacatcgagggccttcatgtt 151072
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 131 bits (66), Expect = 3e-27 Identities = 120/138 (86%) Strand = Plus / Minus Query: 528 cttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatattttcc 587 |||||| || ||||||||||||| ||| |||| ||||||||| |||||| ||| ||||| Sbjct: 62431 cttgtaattttctagggcaaacctactatcagcaggtatatttcctttggcatactttcc 62372 Query: 588 agtgagaactcctgaagctagaggactccatgtagtcaacccaatgccataagtactgta 647 |||||||||||| ||||||||||| |||||||||||||| || | |||||| || ||||| Sbjct: 62371 agtgagaactcccgaagctagagggctccatgtagtcaaacccaggccatacgtgctgta 62312 Query: 648 aagaggtacaaactcaga 665 |||||||| |||||||| Sbjct: 62311 aagaggtaagaactcaga 62294 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 363 ctggctttctttggtggccccggtgatcacggacgacacgttggggttagacgcgcacca 422 |||| ||||||| ||||| || |||||||| || || ||||| ||||| || |||||||| Sbjct: 63763 ctggttttcttttgtggctccagtgatcacagatgagacgtttgggttcgatgcgcacca 63704 Query: 423 cgcgatacccagctgggccatcgagaccccgagctcggaagcgatcggtttgagcccgtt 482 ||||||| | || ||||| | ||| || || ||||| ||||| || ||||| ||||| || Sbjct: 63703 cgcgatagcaagttgggctaacgaaacaccaagctcagaagcaattggttttagcccatt 63644 Query: 483 cactttcctaagcgtgtcgtcaaccagagacctgtttgccaggttct 529 ||| || || || ||||||||||||||||| ||||| |||||||||| Sbjct: 63643 cacctttctcagtgtgtcgtcaaccagagatctgttggccaggttct 63597 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 246 gcttcatctgtacgactcgaggcgcttgggcttgctctggatgaccgcctcgatcttctc 305 |||||||||||| |||||| |||||| |||||||| |||| ||||| |||||||| || Sbjct: 64001 gcttcatctgtatgactcggtgcgcttcggcttgctttggaccaccgcttcgatcttgtc 63942 Query: 306 caggacctccggagtcagcagcgggacgacctccagggccttcatgtt 353 | ||| || || || |||||||| | ||| || |||||||||||||| Sbjct: 63941 gacgacttctggggttagcagcggaatgacatcgagggccttcatgtt 63894
>emb|AJ225806.1|EDKCHBETA Egeria densa mRNA for potassium channel beta subunit Length = 984 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 523 aggttcttgtagttatctagggcaaaccgactttcaggaggtatattgcctttgctatat 582 |||||||||||||| || | ||||||||||| |||| |||||| || |||||| | ||| Sbjct: 713 aggttcttgtagttctccaaagcaaaccgactgtcagcaggtatgtttcctttggtgtat 654 Query: 583 tttccagtgagaactcctgaagctagaggactccatgtagtcaacccaatgccata 638 |||||||| || ||||| ||||| || |||||||||||||| | ||||||||||| Sbjct: 653 tttccagttagtactccagaagccagtggactccatgtagtaaggccaatgccata 598
>emb|AJ000999.1|STKCHANB Solanum tuberosum mRNA for putative beta-subunit of K+ channel Length = 1203 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 578 tatattttccagtgagaactcctgaagctagaggactccatgt 620 ||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 668 tatattttccagtcagaacgcctgaagcgagaggactccatgt 626
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 292 gcctcgatcttctccaggacctccggagtcag 323 |||||||||||||||||| ||||||| ||||| Sbjct: 2745672 gcctcgatcttctccaggtcctccggcgtcag 2745703
>ref|XM_475852.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cacgggacagcagcacacgcag 46 |||||||||||||||||||||| Sbjct: 91 cacgggacagcagcacacgcag 70
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cacgggacagcagcacacgcag 46 |||||||||||||||||||||| Sbjct: 28626 cacgggacagcagcacacgcag 28605
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cacgggacagcagcacacgcag 46 |||||||||||||||||||||| Sbjct: 103811 cacgggacagcagcacacgcag 103790
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cacgggacagcagcacacgcag 46 |||||||||||||||||||||| Sbjct: 128314 cacgggacagcagcacacgcag 128293
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cacgggacagcagcacacgcag 46 |||||||||||||||||||||| Sbjct: 27097230 cacgggacagcagcacacgcag 27097209
>gb|AC010562.5| Drosophila melanogaster 3L BAC RP98-21K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181528 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 ctaagcgtgtcgtcaaccaga 510 ||||||||||||||||||||| Sbjct: 72028 ctaagcgtgtcgtcaaccaga 72008
>gb|AE003560.3| Drosophila melanogaster chromosome 3L, section 25 of 83 of the complete sequence Length = 285494 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 ctaagcgtgtcgtcaaccaga 510 ||||||||||||||||||||| Sbjct: 156701 ctaagcgtgtcgtcaaccaga 156721
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 agcgggacgacctccagggc 344 |||||||||||||||||||| Sbjct: 2108047 agcgggacgacctccagggc 2108028
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgcttgggcttgctctggat 287 |||||||||||||||||||| Sbjct: 1509558 cgcttgggcttgctctggat 1509577
>emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on chromosome 11 Contains a aldo-keto reductase family 1 member B3 (aldose reductase) (Akr1b3) pseudogene, the gene for a novel protein similar to human methionine adenosyltransferase II beta (MAT2B), the Hmmr gene for hyaluronan mediated motility receptor (RHAMM), the gene for a novel protein (D11Ertd603e), the Ccng1 gene for cyclin G1 and three CpG islands, complete sequence Length = 193551 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 agacctgtttgccaggttct 529 |||||||||||||||||||| Sbjct: 29637 agacctgtttgccaggttct 29618
>emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in linkage group 2, complete sequence Length = 167067 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 acaacaaaatgtttcacacg 117 |||||||||||||||||||| Sbjct: 109056 acaacaaaatgtttcacacg 109075
>gb|AC099550.5| Homo sapiens BAC clone RP11-484O2 from 4, complete sequence Length = 145479 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 atgccataagtactgtaaag 650 |||||||||||||||||||| Sbjct: 9565 atgccataagtactgtaaag 9584
>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence Length = 144511 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ggaaaaaatcccaccatgtg 211 |||||||||||||||||||| Sbjct: 65537 ggaaaaaatcccaccatgtg 65518
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aaaaatcccaccatgtggag 214 |||||||||||||||||||| Sbjct: 16548368 aaaaatcccaccatgtggag 16548349
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ccagggccttcatgttctcc 357 |||||||||||||||||||| Sbjct: 1068533 ccagggccttcatgttctcc 1068552
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aaaaatcccaccatgtggag 214 |||||||||||||||||||| Sbjct: 20192 aaaaatcccaccatgtggag 20173
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ccagggccttcatgttctcc 357 |||||||||||||||||||| Sbjct: 741511 ccagggccttcatgttctcc 741530 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,940,748 Number of Sequences: 3902068 Number of extensions: 4940748 Number of successful extensions: 88319 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87989 Number of HSP's gapped (non-prelim): 330 length of query: 685 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 662 effective length of database: 17,143,297,704 effective search space: 11348863080048 effective search space used: 11348863080048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)