ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482703.1| Oryza sativa (japonica cultivar-group), mRNA 462 e-127
2dbj|AK067199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 460 e-126
3gb|AY112180.1| Zea mays CL40542_1 mRNA sequence 373 e-100
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) ge... 44 0.56
7gb|DQ002406.1| Zea mays copia retrotransposon ji and helitron Mo... 44 0.56
8gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC 44 0.56
9emb|X64408.1|ZMPGTNSG Z.mays gene PG for polygalacturonase 44 0.56
10gb|AF464772.1| Zea mays clone 52C10 retrotransposon Zeon1 LTR-li... 44 0.56
11emb|X66692.1|ZMPGALAC Z.mays gene for polygalacturonase 44 0.56
12gb|AY555143.1| Zea may BAC clone c573L14, complete sequence 44 0.56
13gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 44 0.56
14gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 44 0.56
15gb|AY431368.1| Aedes aegypti ASAP ID: 43174 ADP ribosylation fac... 42 2.2
16gb|AC005220.1| Homo sapiens chromosome 20, BAC clone 99 (LBNL H8... 42 2.2
17gb|AC150204.30| Medicago truncatula clone mth2-69i3, complete se... 42 2.2
18emb|Z30974.1|CEK08E5 Caenorhabditis elegans Cosmid K08E5, comple... 42 2.2
19emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromo... 42 2.2
20gb|AC104797.3| Homo sapiens BAC clone RP11-327I3 from 4, complet... 42 2.2
21emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on ch... 42 2.2
22gb|AC099335.2| Homo sapiens chromosome 1 clone RP11-104D3, compl... 42 2.2
23gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, comp... 42 2.2
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
25dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
26dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
27emb|AL928705.5| Mouse DNA sequence from clone RP23-200K17 on chr... 42 2.2
28gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, co... 40 8.8
29gb|AY774254.1| Synthetic construct Francisella tularensis clone ... 40 8.8
30gb|AC139062.10| Mus musculus chromosome 17, clone RP23-69L11, co... 40 8.8
31gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome... 40 8.8
32gb|AC021016.5| Homo sapiens BAC clone RP11-378A13 from 2, comple... 40 8.8
33gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, com... 40 8.8
34emb|Z68004.1|CEF47B10 Caenorhabditis elegans Cosmid F47B10, comp... 40 8.8
35ref|XM_737252.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.8
36gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence 40 8.8
37emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chr... 40 8.8
38emb|AL391707.9| Human DNA sequence from clone RP11-166B18 on chr... 40 8.8
39emb|AL354889.14| Human DNA sequence from clone RP11-290F20 on ch... 40 8.8
40emb|AL139128.24| Human DNA sequence from clone RP11-101O6 on chr... 40 8.8
41gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence 40 8.8
42gb|AC104831.3| Homo sapiens 3 BAC RP11-451G4 (Roswell Park Cance... 40 8.8
43gb|AC040917.6| Homo sapiens chromosome 8, clone RP11-1M21, compl... 40 8.8
44gb|AC073173.7| Homo sapiens chromosome 10 clone RP11-183D3, comp... 40 8.8
45gb|AC018390.5| Homo sapiens chromosome , clone RP11-11E23, compl... 40 8.8
46gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, comple... 40 8.8
47gb|AC096922.2| Homo sapiens chromosome 3 clone RP11-436J20, comp... 40 8.8
48gb|AC115069.6| Mus musculus chromosome 7, clone RP24-405B11, com... 40 8.8
49gb|DQ008664.1| Podocarpus macrophyllus 26S ribosomal RNA gene, p... 40 8.8
50ref|NM_077420.2| Caenorhabditis elegans F47B10.1 (F47B10.1) mRNA... 40 8.8
51emb|BX247903.20| Zebrafish DNA sequence from clone CH211-112C12 ... 40 8.8
52gb|AC096729.3| Homo sapiens BAC clone RP11-63M2 from 4, complete... 40 8.8
53gb|AC154721.3| Mus musculus BAC clone RP24-371H8 from chromosome... 40 8.8
54gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, comple... 40 8.8
55gb|AC012627.4|AC012627 Homo sapiens chromosome 19 clone CTD-2130... 40 8.8
56emb|AL390801.4|CNS06C7S Human chromosome 14 DNA sequence BAC R-7... 40 8.8
57emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-7... 40 8.8
58gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence 40 8.8
59emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 40 8.8
60emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 40 8.8
61emb|CT573032.5| Mouse DNA sequence from clone RP24-315C3 on chro... 40 8.8
62gb|AC151272.2| Mus musculus BAC clone RP24-208G22 from 17, compl... 40 8.8
63gb|AC111124.8| Mus musculus chromosome 7, clone RP23-331A21, com... 40 8.8
64gb|AF207953.5| Homo sapiens chromosome 8 clone CTA-389B map q21.... 40 8.8
65gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome... 40 8.8
66emb|AL627302.20| Mouse DNA sequence from clone RP23-272D10 on ch... 40 8.8
67gb|AY872160.1| Synthetic construct hypothetical protein (FTT0196... 40 8.8
68emb|AL391261.3|CNS06C85 Human chromosome 14 DNA sequence BAC C-2... 40 8.8 
>ref|XM_482703.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2727

 Score =  462 bits (233), Expect = e-127
 Identities = 406/464 (87%)
 Strand = Plus / Minus

                                                                        
Query: 172  gtcgagctgagattgcagatcagatatagacagcataccaatagactgaatttcgtcagc 231
            |||||||||||| || || || | ||||| || ||||||||| || || |||||||||||
Sbjct: 2564 gtcgagctgagactggaggtcgggtataggcaacataccaattgattggatttcgtcagc 2505

                                                                        
Query: 232  agagtattctgagttcagaagggactgtagctgcatatgagcctcaactatattcgtctt 291
             | ||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 2504 tgtgtattctgacttcagaagggagtgtagctgtatatgagcctcaactatatttgtctt 2445

                                                                        
Query: 292  gatgggtttgaatataattaatcttgtcgaaggattttgcaaatacaacatcaacttggt 351
            ||| |||||||||| ||| || |  || || |||||||||||||||||| ||| | ||||
Sbjct: 2444 gattggtttgaataaaatcaaccgcgtagatggattttgcaaatacaacctcatcatggt 2385

                                                                        
Query: 352  cattgctttgggcagatcttgttgaatagcagtcccaaccttttgaaccagctctgcaac 411
            |||| ||||||| | |||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 2384 cattactttgggtaaatcttgctgaatagcagtcccaaccttttgaaccagctccgcaac 2325

                                                                        
Query: 412  tttatcgggtgaagcaaatgcttgtgtcttgaggggttttgctagaacagaatccaaatt 471
             ||||| || |||||||||||||| ||||| |||||||| || |||||||||||||| ||
Sbjct: 2324 cttatcaggagaagcaaatgcttgagtcttaaggggtttagccagaacagaatccaattt 2265

                                                                        
Query: 472  ctggccctggctacctgaggacagtgcaactttgacagctgttaccttagtaacgaaaga 531
            ||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||
Sbjct: 2264 ctgaccctggctacccgaggacagtacaactttgacagccgttaccttagtaacaaaaga 2205

                                                                        
Query: 532  aagcattgggtccactactagtttagtgatggacattataaactcttcacaagtagattt 591
            ||||||||| |||||||||| ||| || ||||||||||||||||||||||| ||||||||
Sbjct: 2204 aagcattggatccactactaattttgtaatggacattataaactcttcacaggtagattt 2145

                                                        
Query: 592  aangcctttctccagttcttttctggcgtcaatctgattctcca 635
             | || ||| |||| |||||||||||| ||||| || |||||||
Sbjct: 2144 gaggcttttttccaattcttttctggcatcaatttggttctcca 2101
to top
>dbj|AK067199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097F22, full
            insert sequence
          Length = 2727

 Score =  460 bits (232), Expect = e-126
 Identities = 405/463 (87%)
 Strand = Plus / Minus

                                                                        
Query: 173  tcgagctgagattgcagatcagatatagacagcataccaatagactgaatttcgtcagca 232
            ||||||||||| || || || | ||||| || ||||||||| || || ||||||||||| 
Sbjct: 2563 tcgagctgagactggaggtcgggtataggcaacataccaattgattggatttcgtcagct 2504

                                                                        
Query: 233  gagtattctgagttcagaagggactgtagctgcatatgagcctcaactatattcgtcttg 292
            | ||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 2503 gtgtattctgacttcagaagggagtgtagctgtatatgagcctcaactatatttgtcttg 2444

                                                                        
Query: 293  atgggtttgaatataattaatcttgtcgaaggattttgcaaatacaacatcaacttggtc 352
            || |||||||||| ||| || |  || || |||||||||||||||||| ||| | |||||
Sbjct: 2443 attggtttgaataaaatcaaccgcgtagatggattttgcaaatacaacctcatcatggtc 2384

                                                                        
Query: 353  attgctttgggcagatcttgttgaatagcagtcccaaccttttgaaccagctctgcaact 412
            ||| ||||||| | |||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 2383 attactttgggtaaatcttgctgaatagcagtcccaaccttttgaaccagctccgcaacc 2324

                                                                        
Query: 413  ttatcgggtgaagcaaatgcttgtgtcttgaggggttttgctagaacagaatccaaattc 472
            ||||| || |||||||||||||| ||||| |||||||| || |||||||||||||| |||
Sbjct: 2323 ttatcaggagaagcaaatgcttgagtcttaaggggtttagccagaacagaatccaatttc 2264

                                                                        
Query: 473  tggccctggctacctgaggacagtgcaactttgacagctgttaccttagtaacgaaagaa 532
            || ||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||
Sbjct: 2263 tgaccctggctacccgaggacagtacaactttgacagccgttaccttagtaacaaaagaa 2204

                                                                        
Query: 533  agcattgggtccactactagtttagtgatggacattataaactcttcacaagtagattta 592
            |||||||| |||||||||| ||| || ||||||||||||||||||||||| |||||||| 
Sbjct: 2203 agcattggatccactactaattttgtaatggacattataaactcttcacaggtagatttg 2144

                                                       
Query: 593  angcctttctccagttcttttctggcgtcaatctgattctcca 635
            | || ||| |||| |||||||||||| ||||| || |||||||
Sbjct: 2143 aggcttttttccaattcttttctggcatcaatttggttctcca 2101
to top
>gb|AY112180.1| Zea mays CL40542_1 mRNA sequence
          Length = 934

 Score =  373 bits (188), Expect = e-100
 Identities = 406/479 (84%)
 Strand = Plus / Minus

                                                                       
Query: 160 ctacagaagactgtcgagctgagattgcagatcagatatagacagcataccaatagactg 219
           ||||| ||| ||||| |||||||| ||||| |||| ||| | || |||||| || || ||
Sbjct: 737 ctacaaaaggctgtcaagctgagactgcaggtcaggtatcggcaacataccgatggattg 678

                                                                       
Query: 220 aatttcgtcagcagagtattctgagttcagaagggactgtagctgcatatgagcctcaac 279
            ||||| |||  |||||| || || ||||||||||| || ||||| ||||||||||||||
Sbjct: 677 catttcttcactagagtactccgacttcagaagggaatgcagctggatatgagcctcaac 618

                                                                       
Query: 280 tatattcgtcttgatgggtttgaatataattaatcttgtcgaaggattttgcaaatacaa 339
           |||||| |||||||| ||||||||||  || |  |  || || |||||||||||||||||
Sbjct: 617 tatatttgtcttgataggtttgaataagatcatccgagtagatggattttgcaaatacaa 558

                                                                       
Query: 340 catcaacttggtcattgctttgggcagatcttgttgaatagcagtcccaaccttttgaac 399
           | ||| |||||||||| ||||||||| |||||||||||| ||||   ||||||| |||||
Sbjct: 557 cctcatcttggtcattactttgggcaaatcttgttgaatggcagcggcaaccttctgaac 498

                                                                       
Query: 400 cagctctgcaactttatcgggtgaagcaaatgcttgtgtcttgaggggttttgctagaac 459
            ||||| ||||||||||| || |||||||| ||||| ||||| |  ||||||||||||||
Sbjct: 497 tagctcagcaactttatcaggagaagcaaaagcttgagtcttcaaaggttttgctagaac 438

                                                                       
Query: 460 agaatccaaattctggccctggctacctgaggacagtgcaactttgacagctgttacctt 519
            ||||| || ||||| ||||||||||| ||||||| |||||||||||| || ||||||||
Sbjct: 437 tgaatctaatttctgaccctggctaccagaggacaatgcaactttgacggcagttacctt 378

                                                                       
Query: 520 agtaacgaaagaaagcattgggtccactactagtttagtgatggacattataaactcttc 579
           |||||| |||||||||||||||||  |||||| |||||| ||||||||||||||||||||
Sbjct: 377 agtaacaaaagaaagcattgggtcagctactaatttagttatggacattataaactcttc 318

                                                                      
Query: 580 acaagtagatttaangcctttctccagttcttttctggcgtcaatctgattctccaaaa 638
           ||| |||| ||||| || ||||||||  ||||||||||| ||||| || ||||||||||
Sbjct: 317 acaggtagctttaaggcttttctccaactcttttctggcatcaatttggttctccaaaa 259
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  155 bits (78), Expect = 2e-34
 Identities = 117/130 (90%)
 Strand = Plus / Minus

                                                                            
Query: 389      accttttgaaccagctctgcaactttatcgggtgaagcaaatgcttgtgtcttgaggggt 448
                ||||||||||||||||| ||||| ||||| || |||||||||||||| ||||| ||||||
Sbjct: 22015921 accttttgaaccagctccgcaaccttatcaggagaagcaaatgcttgagtcttaaggggt 22015862

                                                                            
Query: 449      tttgctagaacagaatccaaattctggccctggctacctgaggacagtgcaactttgaca 508
                || || |||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 22015861 ttagccagaacagaatccaatttctgaccctggctacccgaggacagtacaactttgaca 22015802

                          
Query: 509      gctgttacct 518
                || |||||||
Sbjct: 22015801 gccgttacct 22015792



 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Minus

                                                                            
Query: 172      gtcgagctgagattgcagatcagatatagacagcataccaatagactgaatttcgtcagc 231
                |||||||||||| || || || | ||||| || ||||||||| || || |||||||||||
Sbjct: 22017034 gtcgagctgagactggaggtcgggtataggcaacataccaattgattggatttcgtcagc 22016975

                                                                      
Query: 232      agagtattctgagttcagaagggactgtagctgcatatgagcctcaactatatt 285
                 | ||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 22016974 tgtgtattctgacttcagaagggagtgtagctgtatatgagcctcaactatatt 22016921



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                            
Query: 514      taccttagtaacgaaagaaagcattgggtccactactagtttagtgatggacattataaa 573
                |||||||||||| |||||||||||||| |||||||||| ||| || ||||||||||||||
Sbjct: 22015326 taccttagtaacaaaagaaagcattggatccactactaattttgtaatggacattataaa 22015267

                                  
Query: 574      ctcttcacaagtagattt 591
                ||||||||| ||||||||
Sbjct: 22015266 ctcttcacaggtagattt 22015249



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                            
Query: 289      cttgatgggtttgaatataattaatcttgtcgaaggattttgcaaatacaacatcaactt 348
                |||||| |||||||||| ||| || |  || || |||||||||||||||||| ||| | |
Sbjct: 22016093 cttgattggtttgaataaaatcaaccgcgtagatggattttgcaaatacaacctcatcat 22016034

                                                            
Query: 349      ggtcattgctttgggcagatcttgttgaatagcagtcccaacct 392
                ||||||| ||||||| | |||||| |||||||||||||||||||
Sbjct: 22016033 ggtcattactttgggtaaatcttgctgaatagcagtcccaacct 22015990
to top
>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_H01
          Length = 128124

 Score =  155 bits (78), Expect = 2e-34
 Identities = 117/130 (90%)
 Strand = Plus / Minus

                                                                          
Query: 389    accttttgaaccagctctgcaactttatcgggtgaagcaaatgcttgtgtcttgaggggt 448
              ||||||||||||||||| ||||| ||||| || |||||||||||||| ||||| ||||||
Sbjct: 101670 accttttgaaccagctccgcaaccttatcaggagaagcaaatgcttgagtcttaaggggt 101611

                                                                          
Query: 449    tttgctagaacagaatccaaattctggccctggctacctgaggacagtgcaactttgaca 508
              || || |||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 101610 ttagccagaacagaatccaatttctgaccctggctacccgaggacagtacaactttgaca 101551

                        
Query: 509    gctgttacct 518
              || |||||||
Sbjct: 101550 gccgttacct 101541



 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Minus

                                                                          
Query: 172    gtcgagctgagattgcagatcagatatagacagcataccaatagactgaatttcgtcagc 231
              |||||||||||| || || || | ||||| || ||||||||| || || |||||||||||
Sbjct: 102783 gtcgagctgagactggaggtcgggtataggcaacataccaattgattggatttcgtcagc 102724

                                                                    
Query: 232    agagtattctgagttcagaagggactgtagctgcatatgagcctcaactatatt 285
               | ||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 102723 tgtgtattctgacttcagaagggagtgtagctgtatatgagcctcaactatatt 102670



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                          
Query: 514    taccttagtaacgaaagaaagcattgggtccactactagtttagtgatggacattataaa 573
              |||||||||||| |||||||||||||| |||||||||| ||| || ||||||||||||||
Sbjct: 101075 taccttagtaacaaaagaaagcattggatccactactaattttgtaatggacattataaa 101016

                                
Query: 574    ctcttcacaagtagattt 591
              ||||||||| ||||||||
Sbjct: 101015 ctcttcacaggtagattt 100998



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                          
Query: 289    cttgatgggtttgaatataattaatcttgtcgaaggattttgcaaatacaacatcaactt 348
              |||||| |||||||||| ||| || |  || || |||||||||||||||||| ||| | |
Sbjct: 101842 cttgattggtttgaataaaatcaaccgcgtagatggattttgcaaatacaacctcatcat 101783

                                                          
Query: 349    ggtcattgctttgggcagatcttgttgaatagcagtcccaacct 392
              ||||||| ||||||| | |||||| |||||||||||||||||||
Sbjct: 101782 ggtcattactttgggtaaatcttgctgaatagcagtcccaacct 101739
to top
>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and
              truncated rust resistance protein rp3-2t (rp3-2) gene,
              complete sequence
          Length = 276326

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 570    taaactcttcacaagtagattt 591
              ||||||||||||||||||||||
Sbjct: 137341 taaactcttcacaagtagattt 137320
to top
>gb|DQ002406.1| Zea mays copia retrotransposon ji and helitron Mo17_14577, complete
             sequence
          Length = 92777

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 570   taaactcttcacaagtagattt 591
             ||||||||||||||||||||||
Sbjct: 17488 taaactcttcacaagtagattt 17509



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   aactcttcacaagtagattt 591
             ||||||||||||||||||||
Sbjct: 49106 aactcttcacaagtagattt 49125
to top
>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC
          Length = 226001

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 570   taaactcttcacaagtagattt 591
             ||||||||||||||||||||||
Sbjct: 70652 taaactcttcacaagtagattt 70631
to top
>emb|X64408.1|ZMPGTNSG Z.mays gene PG for polygalacturonase
          Length = 2950

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 570 taaactcttcacaagtagattt 591
           ||||||||||||||||||||||
Sbjct: 414 taaactcttcacaagtagattt 435
to top
>gb|AF464772.1| Zea mays clone 52C10 retrotransposon Zeon1 LTR-like sequence and
           retrotransposon Prem2, partial sequence
          Length = 981

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 570 taaactcttcacaagtagattt 591
           ||||||||||||||||||||||
Sbjct: 760 taaactcttcacaagtagattt 739
to top
>emb|X66692.1|ZMPGALAC Z.mays gene for polygalacturonase
          Length = 3788

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 570  taaactcttcacaagtagattt 591
            ||||||||||||||||||||||
Sbjct: 2085 taaactcttcacaagtagattt 2106
to top
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence
          Length = 144792

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 570   taaactcttcacaagtagattt 591
             ||||||||||||||||||||||
Sbjct: 54475 taaactcttcacaagtagattt 54496
to top
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 570    taaactcttcacaagtagattt 591
              ||||||||||||||||||||||
Sbjct: 387307 taaactcttcacaagtagattt 387328



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 570   taaactcttcacaagtagattt 591
             ||||||||||||||||||||||
Sbjct: 31128 taaactcttcacaagtagattt 31149
to top
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 570   taaactcttcacaagtagattt 591
             ||||||||||||||||||||||
Sbjct: 11797 taaactcttcacaagtagattt 11818
to top
>gb|AY431368.1| Aedes aegypti ASAP ID: 43174 ADP ribosylation factor mRNA sequence
          Length = 709

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 350 gtcattgctttgggcagatcttgtt 374
           |||||||| ||||||||||||||||
Sbjct: 456 gtcattgcgttgggcagatcttgtt 432
to top
>gb|AC005220.1| Homo sapiens chromosome 20, BAC clone 99 (LBNL H80), complete sequence
          Length = 163196

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    aaagtgtgtttaaatttgatt 70
             |||||||||||||||||||||
Sbjct: 75843 aaagtgtgtttaaatttgatt 75823
to top
>gb|AC150204.30| Medicago truncatula clone mth2-69i3, complete sequence
          Length = 115027

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 542   tccactactagtttagtgatggacattataaactcttcacaagtagatttaangcctttc 601
             ||||| ||||| ||||| |  ||||| || |||||||||||||| | ||||| || ||| 
Sbjct: 32568 tccacaactagcttagtaactgacatgatgaactcttcacaagtggctttaaggcttttt 32627

                     
Query: 602   tccagttc 609
             ||||||||
Sbjct: 32628 tccagttc 32635
to top
>emb|Z30974.1|CEK08E5 Caenorhabditis elegans Cosmid K08E5, complete sequence
          Length = 32828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 498   caactttgacagctgttaccttagt 522
             ||||||||||||||| |||||||||
Sbjct: 29635 caactttgacagctgataccttagt 29659
to top
>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete
              sequence
          Length = 176646

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 449    tttgctagaacagaatccaaa 469
              |||||||||||||||||||||
Sbjct: 170340 tttgctagaacagaatccaaa 170360
to top
>gb|AC104797.3| Homo sapiens BAC clone RP11-327I3 from 4, complete sequence
          Length = 57338

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 69    ttacagaactaaaaacaaaat 89
             |||||||||||||||||||||
Sbjct: 15963 ttacagaactaaaaacaaaat 15983
to top
>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the
              5' end of the Centb1 gene for centaurin beta 1, the gene
              for a novel protein similar to protein phosphatase 1
              regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the
              Gps2 gene for G protein pathway suppressor 2, the Eif5a
              gene for eukaryotic translation initiation factor 5A, the
              Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute
              carrier family 2 (facilitated glucose transporter) member
              4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene
              for claudin 7, the Rai12 gene for retinoic acid induced 12,
              the Dullard gene for Dullard homolog (Xenopus laevis)
              (novel NLI interacting factor-like phosphatase), the gene
              for novel PHD-finger protein JUNE1, the Dvl2 gene for
              dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for
              acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4
              gene for discs large homolog 4 (Drosophila), the Asgr1 and
              Asgr2 genes for asialoglycoprotein receptor 1 and 2, a
              ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the
              Mgl2 gene for macrophage galactose N-acetyl-galactosamine
              specific lectin 2 and nine CpG islands, complete sequence
          Length = 248203

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 449    tttgctagaacagaatccaaa 469
              |||||||||||||||||||||
Sbjct: 177507 tttgctagaacagaatccaaa 177527
to top
>gb|AC099335.2| Homo sapiens chromosome 1 clone RP11-104D3, complete sequence
          Length = 157665

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    attacagaactaaaaacaaaa 88
             |||||||||||||||||||||
Sbjct: 94704 attacagaactaaaaacaaaa 94724
to top
>gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, complete sequence
          Length = 173135

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 68   attacagaactaaaaacaaaa 88
            |||||||||||||||||||||
Sbjct: 2667 attacagaactaaaaacaaaa 2687
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 30       accatgatagatgtcatatca 50
                |||||||||||||||||||||
Sbjct: 36534554 accatgatagatgtcatatca 36534574
to top
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0414E03
          Length = 139598

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    accatgatagatgtcatatca 50
             |||||||||||||||||||||
Sbjct: 47929 accatgatagatgtcatatca 47949
to top
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0529H11
          Length = 165969

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 30   accatgatagatgtcatatca 50
            |||||||||||||||||||||
Sbjct: 7820 accatgatagatgtcatatca 7840
to top
>emb|AL928705.5| Mouse DNA sequence from clone RP23-200K17 on chromosome X, complete
             sequence
          Length = 197883

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 325   attttgcaaatacaacatcaa 345
             |||||||||||||||||||||
Sbjct: 24577 attttgcaaatacaacatcaa 24597
to top
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence
          Length = 214985

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   aagcaaatgcttgtgtcttg 442
             ||||||||||||||||||||
Sbjct: 87257 aagcaaatgcttgtgtcttg 87238
to top
>gb|AY774254.1| Synthetic construct Francisella tularensis clone FLH156530.01X
           NT02FT0144 gene, complete cds
          Length = 1038

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctgcatatgagcctcaacta 281
           ||||||||||||||||||||
Sbjct: 483 ctgcatatgagcctcaacta 464
to top
>gb|AC139062.10| Mus musculus chromosome 17, clone RP23-69L11, complete sequence
          Length = 136224

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ttacagaactaaaaacaaaa 88
             ||||||||||||||||||||
Sbjct: 51213 ttacagaactaaaaacaaaa 51194
to top
>gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome 12, complete sequence
          Length = 176407

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   tttgaaccagctctgcaact 412
             ||||||||||||||||||||
Sbjct: 40622 tttgaaccagctctgcaact 40603
to top
>gb|AC021016.5| Homo sapiens BAC clone RP11-378A13 from 2, complete sequence
          Length = 191755

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   gagttcagaagggactgtag 261
             ||||||||||||||||||||
Sbjct: 46207 gagttcagaagggactgtag 46188
to top
>gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, complete sequence
          Length = 223784

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    aaaaagtatgggctacagaagact 171
              ||||||| ||||||||||||||||
Sbjct: 124689 aaaaagtctgggctacagaagact 124666
to top
>emb|Z68004.1|CEF47B10 Caenorhabditis elegans Cosmid F47B10, complete sequence
          Length = 30961

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   cctcaactatattcgtcttgatgg 296
             ||||||||| ||||||||||||||
Sbjct: 10723 cctcaactacattcgtcttgatgg 10700
to top
>ref|XM_737252.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000365.05.0)
            partial mRNA
          Length = 2067

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    caacaacctctattagccat 27
            ||||||||||||||||||||
Sbjct: 1940 caacaacctctattagccat 1959
to top
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence
          Length = 180971

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   taaactcttcacaagtagat 589
             ||||||||||||||||||||
Sbjct: 58622 taaactcttcacaagtagat 58641
to top
>emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chromosome 1 Contains the
             5' end of the RAB3B gene for RAB3B member RAS oncogene
             family, a 40s ribosomal protein S26 (RPS26) pseudogene,
             the gene for endoplasmic reticulum thioredoxin superfamily
             member 18 kDa (TLP19), three novel genes, the 5' end of
             the gene for a novel protein similar to RNA polymerase B
             transcription factor 3 (MGC23908) and a CpG island,
             complete sequence
          Length = 142790

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   acagaatccaaattctggcc 477
             ||||||||||||||||||||
Sbjct: 13787 acagaatccaaattctggcc 13806
to top
>emb|AL391707.9| Human DNA sequence from clone RP11-166B18 on chromosome 10, complete
              sequence
          Length = 166826

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 424    agcaaatgcttgtgtcttga 443
              ||||||||||||||||||||
Sbjct: 130640 agcaaatgcttgtgtcttga 130659
to top
>emb|AL354889.14| Human DNA sequence from clone RP11-290F20 on chromosome 20 Contains three
              novel genes, complete sequence
          Length = 160311

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    atgggtttgaatataattaa 312
              ||||||||||||||||||||
Sbjct: 115967 atgggtttgaatataattaa 115948
to top
>emb|AL139128.24| Human DNA sequence from clone RP11-101O6 on chromosome 1 Contains the
             gene for a novel protein (FLJ20203), a proteasome
             (prosome, macropain) 26S subunit non-ATPase 7 (Mov34
             homolog) (PSMD7) pseudogene, the SYT11 gene for
             synaptotagmin XI. the 3' end of RIT1 Ras-like without CAAX
             1 and the 5' end of the gene for a novel protein
             (FLJ20203), complete sequence
          Length = 144833

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   gtattctgagttcagaaggg 254
             ||||||||||||||||||||
Sbjct: 83686 gtattctgagttcagaaggg 83667
to top
>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence
          Length = 233369

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 570   taaactcttcacaagtagat 589
             ||||||||||||||||||||
Sbjct: 12010 taaactcttcacaagtagat 11991
to top
>gb|AC104831.3| Homo sapiens 3 BAC RP11-451G4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    acagaactaaaaacaaaatc 90
             ||||||||||||||||||||
Sbjct: 77587 acagaactaaaaacaaaatc 77606
to top
>gb|AC040917.6| Homo sapiens chromosome 8, clone RP11-1M21, complete sequence
          Length = 158031

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acagaactaaaaacaaaatc 90
             ||||||||||||||||||||
Sbjct: 87028 acagaactaaaaacaaaatc 87009
to top
>gb|AC073173.7| Homo sapiens chromosome 10 clone RP11-183D3, complete sequence
          Length = 114611

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acagaactaaaaacaaaatc 90
             ||||||||||||||||||||
Sbjct: 84526 acagaactaaaaacaaaatc 84507
to top
>gb|AC018390.5| Homo sapiens chromosome , clone RP11-11E23, complete sequence
          Length = 167130

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   acagaactaaaaacaaaatc 90
            ||||||||||||||||||||
Sbjct: 6783 acagaactaaaaacaaaatc 6764
to top
>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence
          Length = 159969

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    tgctttgggcagatcttgtt 374
              ||||||||||||||||||||
Sbjct: 107652 tgctttgggcagatcttgtt 107633
to top
>gb|AC096922.2| Homo sapiens chromosome 3 clone RP11-436J20, complete sequence
          Length = 218652

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acagaactaaaaacaaaatc 90
              ||||||||||||||||||||
Sbjct: 129875 acagaactaaaaacaaaatc 129894
to top
>gb|AC115069.6| Mus musculus chromosome 7, clone RP24-405B11, complete sequence
          Length = 168442

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 426  caaatgcttgtgtcttgagg 445
            ||||||||||||||||||||
Sbjct: 7198 caaatgcttgtgtcttgagg 7179
to top
>gb|DQ008664.1| Podocarpus macrophyllus 26S ribosomal RNA gene, partial sequence
          Length = 3322

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 tttatcgggtgaagcaaatg 431
           ||||||||||||||||||||
Sbjct: 931 tttatcgggtgaagcaaatg 950
to top
>ref|NM_077420.2| Caenorhabditis elegans F47B10.1 (F47B10.1) mRNA, complete cds
          Length = 1667

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 273 cctcaactatattcgtcttgatgg 296
           ||||||||| ||||||||||||||
Sbjct: 847 cctcaactacattcgtcttgatgg 870
to top
>emb|BX247903.20| Zebrafish DNA sequence from clone CH211-112C12 in linkage group 18,
             complete sequence
          Length = 188859

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 133   ataacaaaacagacgaaaaagtat 156
             ||||||||||||| ||||||||||
Sbjct: 38990 ataacaaaacagaagaaaaagtat 38967
to top
>gb|AC096729.3| Homo sapiens BAC clone RP11-63M2 from 4, complete sequence
          Length = 161900

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acagaactaaaaacaaaatc 90
              ||||||||||||||||||||
Sbjct: 157357 acagaactaaaaacaaaatc 157376
to top
>gb|AC154721.3| Mus musculus BAC clone RP24-371H8 from chromosome 17, complete sequence
          Length = 128301

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acagaactaaaaacaaaatc 90
              ||||||||||||||||||||
Sbjct: 120406 acagaactaaaaacaaaatc 120387
to top
>gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, complete sequence
          Length = 183666

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acagaactaaaaacaaaatc 90
              ||||||||||||||||||||
Sbjct: 138549 acagaactaaaaacaaaatc 138568
to top
>gb|AC012627.4|AC012627 Homo sapiens chromosome 19 clone CTD-2130K10, complete sequence
          Length = 100925

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acagaactaaaaacaaaatc 90
             ||||||||||||||||||||
Sbjct: 28001 acagaactaaaaacaaaatc 27982
to top
>emb|AL390801.4|CNS06C7S Human chromosome 14 DNA sequence BAC R-728G21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166847

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acagaactaaaaacaaaatc 90
              ||||||||||||||||||||
Sbjct: 121451 acagaactaaaaacaaaatc 121432
to top
>emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-783L4 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184656

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ccatccaccatgatagatgt 43
             ||||||||||||||||||||
Sbjct: 34430 ccatccaccatgatagatgt 34411
to top
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 572    aactcttcacaagtagattt 591
              ||||||||||||||||||||
Sbjct: 347285 aactcttcacaagtagattt 347304



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 572    aactcttcacaagtagattt 591
              ||||||||||||||||||||
Sbjct: 167879 aactcttcacaagtagattt 167898
to top
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 262     ctgcatatgagcctcaacta 281
               ||||||||||||||||||||
Sbjct: 1830166 ctgcatatgagcctcaacta 1830147
to top
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    ctgcatatgagcctcaacta 281
              ||||||||||||||||||||
Sbjct: 214628 ctgcatatgagcctcaacta 214647
to top
>emb|CT573032.5| Mouse DNA sequence from clone RP24-315C3 on chromosome 17, complete
            sequence
          Length = 40018

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  agatcagatatagacagcat 207
            ||||||||||||||||||||
Sbjct: 4944 agatcagatatagacagcat 4963
to top
>gb|AC151272.2| Mus musculus BAC clone RP24-208G22 from 17, complete sequence
          Length = 148109

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   agatcagatatagacagcat 207
             ||||||||||||||||||||
Sbjct: 53763 agatcagatatagacagcat 53744
to top
>gb|AC111124.8| Mus musculus chromosome 7, clone RP23-331A21, complete sequence
          Length = 228220

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    caaatgcttgtgtcttgagg 445
              ||||||||||||||||||||
Sbjct: 191195 caaatgcttgtgtcttgagg 191176
to top
>gb|AF207953.5| Homo sapiens chromosome 8 clone CTA-389B map q21.13, complete sequence
          Length = 112288

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acagaactaaaaacaaaatc 90
              ||||||||||||||||||||
Sbjct: 100746 acagaactaaaaacaaaatc 100727
to top
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence
          Length = 219548

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     ttacagaactaaaaacaaaa 88
              ||||||||||||||||||||
Sbjct: 118599 ttacagaactaaaaacaaaa 118618
to top
>emb|AL627302.20| Mouse DNA sequence from clone RP23-272D10 on chromosome X, complete
             sequence
          Length = 191439

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   aacagaatccaaattctggc 476
             ||||||||||||||||||||
Sbjct: 18950 aacagaatccaaattctggc 18931
to top
>gb|AY872160.1| Synthetic construct hypothetical protein (FTT0196) gene, complete
           cds
          Length = 1143

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctgcatatgagcctcaacta 281
           ||||||||||||||||||||
Sbjct: 561 ctgcatatgagcctcaacta 542
to top
>emb|AL391261.3|CNS06C85 Human chromosome 14 DNA sequence BAC C-2014B16 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 162144

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ccatccaccatgatagatgt 43
             ||||||||||||||||||||
Sbjct: 33614 ccatccaccatgatagatgt 33633


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,550,426
Number of Sequences: 3902068
Number of extensions: 6550426
Number of successful extensions: 145891
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145609
Number of HSP's gapped (non-prelim): 282
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top