ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34p06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187581.1| Oryza sativa (japonica cultivar-group), predic... 305 1e-79
2gb|BT018583.1| Zea mays clone EL01N0446D08.d mRNA sequence 266 8e-68
3gb|AY108362.1| Zea mays PCO079366 mRNA sequence 226 7e-56
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 3e-24
5gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7gb|AF479060.1| Sandersonia aurantiaca putative serine threonine ... 101 3e-18
8gb|AC137067.33| Mus musculus strain C57BL/6J clone rp23-288i20, ... 42 2.3
9gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, co... 42 2.3
10emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
11emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
12gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, co... 42 2.3
13gb|AC105110.5| Homo sapiens chromosome 18, clone CTD-2301P8, com... 42 2.3
14gb|AC108452.3| Homo sapiens chromosome 18, clone RP11-60G10, com... 42 2.3
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
16gb|AC127383.4| Homo sapiens BAC clone RP11-1388F24 from 2, compl... 42 2.3
17gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Canc... 42 2.3
18gb|AC003971.1|AC003971 Human BAC 367D17 from chromosome 18, comp... 42 2.3
19ref|XM_522893.1| PREDICTED: Pan troglodytes similar to a disinte... 40 9.1
20ref|XM_516552.1| PREDICTED: Pan troglodytes similar to axonemal ... 40 9.1
21gb|AC146066.4| Pan troglodytes BAC clone RP43-60F19 from 7, comp... 40 9.1
22ref|NM_003814.4| Homo sapiens ADAM metallopeptidase domain 20 (A... 40 9.1
23gb|BC025378.1| Homo sapiens ADAM metallopeptidase domain 20, mRN... 40 9.1
24ref|XM_541831.2| PREDICTED: Canis familiaris similar to axonemal... 40 9.1
25gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complet... 40 9.1
26gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complet... 40 9.1
27gb|AC003079.2| Homo sapiens BAC clone GS1-303P24 from 7, complet... 40 9.1
28emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 40 9.1
29emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, B... 40 9.1
30emb|BX927211.4| Zebrafish DNA sequence from clone CH211-112A3, c... 40 9.1
31gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 9.1
32gb|AC008165.3|AC008165 Homo sapiens BAC clone RP11-139L10 from 7... 40 9.1
33gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, compl... 40 9.1
34gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, comp... 40 9.1
35gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, comp... 40 9.1
36gb|AF158643.1|AF158643 Homo sapiens metalloproteinase-disintegri... 40 9.1
37emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2... 40 9.1
38gb|AF029899.1|AF029899 Homo sapiens ADAM 20 mRNA, complete cds 40 9.1
39emb|AL929586.19| Zebrafish DNA sequence from clone CH211-188I17,... 40 9.1
40emb|AL928665.8| Mouse DNA sequence from clone RP23-294O23 on chr... 40 9.1 
>ref|NM_187581.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1629

 Score =  305 bits (154), Expect = 1e-79
 Identities = 261/299 (87%)
 Strand = Plus / Minus

                                                                        
Query: 366  gattcagttttccacacaatgtcttttagttctgatganaaattntggtanaaactgtga 425
            ||||||| ||||||||| ||||||||||  ||||| || ||||| | ||| ||| |||||
Sbjct: 1343 gattcagatttccacactatgtcttttaactctgacgagaaattgttgtagaaattgtga 1284

                                                                        
Query: 426  aactccaaggtgtctcctccagttttacnaagttcaaccatatggagtgatggagcaacc 485
            |||||||  ||||| ||||||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 1283 aactccagcgtgtcccctccagttttacgaagctcaaccatgtggagtgatggagcaacc 1224

                                                                        
Query: 486  tcaaaaacctccgttgctacagataaatgaccttttcttcctgtcttgtcacctttcagt 545
            || |||||||||||||||||||||||||  ||||||||||| ||||| |||||||| |  
Sbjct: 1223 tcgaaaacctccgttgctacagataaatagccttttcttccagtcttatcaccttttaac 1164

                                                                        
Query: 546  ttcatcttataattttgtttccgcacattgaaaccaanagggccacaggcttcctctatt 605
            ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 1163 ttcatcttataattttgtttccgcacattgaaaccaagaggtccacaagcttcctctatt 1104

                                                                       
Query: 606  ttanacatgatctcttgtggtgtgcgttgtgacncaaaggatgtttcccgctttaccat 664
            ||| |||||||||| |||||||| | ||| ||    ||||| ||||||||||| |||||
Sbjct: 1103 ttagacatgatctcctgtggtgtacattgagatgtgaaggaagtttcccgcttcaccat 1045
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>gb|BT018583.1| Zea mays clone EL01N0446D08.d mRNA sequence
          Length = 1868

 Score =  266 bits (134), Expect = 8e-68
 Identities = 256/299 (85%)
 Strand = Plus / Minus

                                                                        
Query: 366  gattcagttttccacacaatgtcttttagttctgatganaaattntggtanaaactgtga 425
            ||||||| ||||||||| || ||||| || |||||||| ||||| | ||| ||| |||| 
Sbjct: 1471 gattcagctttccacacgatatctttcagctctgatgagaaattcttgtagaaattgtgg 1412

                                                                        
Query: 426  aactccaaggtgtctcctccagttttacnaagttcaaccatatggagtgatggagcaacc 485
            |||||||| ||||||||||||||||||| ||| |||||||| || ||||| |||||||||
Sbjct: 1411 aactccaatgtgtctcctccagttttacgaagctcaaccatgtgaagtgaaggagcaacc 1352

                                                                        
Query: 486  tcaaaaacctccgttgctacagataaatgaccttttcttcctgtcttgtcacctttcagt 545
            ||||||||||| ||||| |||||||| |||||||||||||| |  ||||||||||||| |
Sbjct: 1351 tcaaaaacctcagttgcaacagataagtgaccttttcttccggatttgtcacctttcaat 1292

                                                                        
Query: 546  ttcatcttataattttgtttccgcacattgaaaccaanagggccacaggcttcctctatt 605
            |||||||| ||||||||||||||||| ||||||||||  || ||||| || |||||||||
Sbjct: 1291 ttcatcttgtaattttgtttccgcacgttgaaaccaagtggcccacatgcatcctctatt 1232

                                                                       
Query: 606  ttanacatgatctcttgtggtgtgcgttgtgacncaaaggatgtttcccgctttaccat 664
            ||  |||||||||| |||| ||| | ||| |||   || |||||||||| |||||||||
Sbjct: 1231 tttgacatgatctcctgtgctgtacattgagacgtgaaagatgtttccctctttaccat 1173
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>gb|AY108362.1| Zea mays PCO079366 mRNA sequence
          Length = 632

 Score =  226 bits (114), Expect = 7e-56
 Identities = 251/299 (83%)
 Strand = Plus / Minus

                                                                       
Query: 366 gattcagttttccacacaatgtcttttagttctgatganaaattntggtanaaactgtga 425
           ||||||| ||||||||| || ||||| || || ||||| || || | ||| || ||||| 
Sbjct: 311 gattcagctttccacacgatatctttcagctccgatgagaagttcttgtagaagctgtgg 252

                                                                       
Query: 426 aactccaaggtgtctcctccagttttacnaagttcaaccatatggagtgatggagcaacc 485
           |||||||| ||||||||||| ||||||| ||| |||||||| || |||||||| ||||||
Sbjct: 251 aactccaatgtgtctcctccggttttacgaagctcaaccatgtgaagtgatggggcaacc 192

                                                                       
Query: 486 tcaaaaacctccgttgctacagataaatgaccttttcttcctgtcttgtcacctttcagt 545
           ||||||||||| ||||| |||||||| |||||||||||||| |  ||||||||||||| |
Sbjct: 191 tcaaaaacctcagttgcaacagataagtgaccttttcttccagatttgtcacctttcaat 132

                                                                       
Query: 546 ttcatcttataattttgtttccgcacattgaaaccaanagggccacaggcttcctctatt 605
           |||||||| ||||||||||||||||| |||||||| |  || ||||| || |||||||||
Sbjct: 131 ttcatcttgtaattttgtttccgcacgttgaaaccgagtggcccacatgcatcctctatt 72

                                                                      
Query: 606 ttanacatgatctcttgtggtgtgcgttgtgacncaaaggatgtttcccgctttaccat 664
           ||   ||||||||| |||| ||||| ||| ||    || |||||||||| |||||||||
Sbjct: 71  tttgtcatgatctcctgtgctgtgcattgagatgtgaaagatgtttccctctttaccat 13
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                           
Query: 551     cttataattttgtttccgcacattgaaaccaanagggccacaggcttcctctattttana 610
               |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |
Sbjct: 1495453 cttataattttgtttccgcacattgaaaccaagaggtccacaagcttcctctattttaga 1495512

                                                                     
Query: 611     catgatctcttgtggtgtgcgttgtgacncaaaggatgtttcccgctttaccat 664
               ||||||||| |||||||| | ||| ||    ||||| ||||||||||| |||||
Sbjct: 1495513 catgatctcctgtggtgtacattgagatgtgaaggaagtttcccgcttcaccat 1495566



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                           
Query: 421     tgtgaaactccaaggtgtctcctccagttttacnaagttcaaccatatggagtgatggag 480
               ||||||||||||  ||||| ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 1495090 tgtgaaactccagcgtgtcccctccagttttacgaagctcaaccatgtggagtgatggag 1495149

                              
Query: 481     caacctcaaaaacct 495
               ||||||| |||||||
Sbjct: 1495150 caacctcgaaaacct 1495164



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                 
Query: 492     acctccgttgctacagataaatgaccttttcttcctgtcttgtcaccttt 541
               ||||||||||||||||||||||  ||||||||||| ||||| ||||||||
Sbjct: 1495259 acctccgttgctacagataaatagccttttcttccagtcttatcaccttt 1495308
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>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07,
             complete sequence
          Length = 117612

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                         
Query: 551   cttataattttgtttccgcacattgaaaccaanagggccacaggcttcctctattttana 610
             |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |
Sbjct: 32626 cttataattttgtttccgcacattgaaaccaagaggtccacaagcttcctctattttaga 32685

                                                                   
Query: 611   catgatctcttgtggtgtgcgttgtgacncaaaggatgtttcccgctttaccat 664
             ||||||||| |||||||| | ||| ||    ||||| ||||||||||| |||||
Sbjct: 32686 catgatctcctgtggtgtacattgagatgtgaaggaagtttcccgcttcaccat 32739



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                         
Query: 421   tgtgaaactccaaggtgtctcctccagttttacnaagttcaaccatatggagtgatggag 480
             ||||||||||||  ||||| ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 32263 tgtgaaactccagcgtgtcccctccagttttacgaagctcaaccatgtggagtgatggag 32322

                            
Query: 481   caacctcaaaaacct 495
             ||||||| |||||||
Sbjct: 32323 caacctcgaaaacct 32337



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 492   acctccgttgctacagataaatgaccttttcttcctgtcttgtcaccttt 541
             ||||||||||||||||||||||  ||||||||||| ||||| ||||||||
Sbjct: 32432 acctccgttgctacagataaatagccttttcttccagtcttatcaccttt 32481
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                           
Query: 551     cttataattttgtttccgcacattgaaaccaanagggccacaggcttcctctattttana 610
               |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |
Sbjct: 1495451 cttataattttgtttccgcacattgaaaccaagaggtccacaagcttcctctattttaga 1495510

                                                                     
Query: 611     catgatctcttgtggtgtgcgttgtgacncaaaggatgtttcccgctttaccat 664
               ||||||||| |||||||| | ||| ||    ||||| ||||||||||| |||||
Sbjct: 1495511 catgatctcctgtggtgtacattgagatgtgaaggaagtttcccgcttcaccat 1495564



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                           
Query: 421     tgtgaaactccaaggtgtctcctccagttttacnaagttcaaccatatggagtgatggag 480
               ||||||||||||  ||||| ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 1495088 tgtgaaactccagcgtgtcccctccagttttacgaagctcaaccatgtggagtgatggag 1495147

                              
Query: 481     caacctcaaaaacct 495
               ||||||| |||||||
Sbjct: 1495148 caacctcgaaaacct 1495162



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                 
Query: 492     acctccgttgctacagataaatgaccttttcttcctgtcttgtcaccttt 541
               ||||||||||||||||||||||  ||||||||||| ||||| ||||||||
Sbjct: 1495257 acctccgttgctacagataaatagccttttcttccagtcttatcaccttt 1495306
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>gb|AF479060.1| Sandersonia aurantiaca putative serine threonine kinase mRNA,
           complete cds
          Length = 1051

 Score =  101 bits (51), Expect = 3e-18
 Identities = 131/158 (82%)
 Strand = Plus / Minus

                                                                       
Query: 423 tgaaactccaaggtgtctcctccagttttacnaagttcaaccatatggagtgatggagca 482
           ||||||||||| ||||| |||||||||||||  ||||||||||| || || || || || 
Sbjct: 662 tgaaactccaacgtgtcgcctccagttttacgcagttcaaccatgtgaagagaaggcgct 603

                                                                       
Query: 483 acctcaaaaacctccgttgctacagataaatgaccttttcttcctgtcttgtcacctttc 542
           |||||||||||||| |||||||||||||  ||||| || ||||| || || ||||| |  
Sbjct: 602 acctcaaaaacctctgttgctacagataggtgacccttccttccggttttatcaccctgt 543

                                                 
Query: 543 agtttcatcttataattttgtttccgcacattgaaacc 580
           |  |||||||| || || ||||| ||||||||||||||
Sbjct: 542 aaattcatcttgtagttgtgtttgcgcacattgaaacc 505
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>gb|AC137067.33| Mus musculus strain C57BL/6J clone rp23-288i20, complete sequence
          Length = 207232

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 536   acctttcagtttcatcttata 556
             |||||||||||||||||||||
Sbjct: 85190 acctttcagtttcatcttata 85210
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>gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, complete sequence
          Length = 200979

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 43     tacaaaatacagaaaggcaca 63
              |||||||||||||||||||||
Sbjct: 194415 tacaaaatacagaaaggcaca 194395
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>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
              complete sequence
          Length = 186325

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 618    tcttgtggtgtgcgttgtgac 638
              |||||||||||||||||||||
Sbjct: 176625 tcttgtggtgtgcgttgtgac 176645
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>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
            complete sequence
          Length = 145739

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 618  tcttgtggtgtgcgttgtgac 638
            |||||||||||||||||||||
Sbjct: 6298 tcttgtggtgtgcgttgtgac 6318
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>gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, complete sequence
          Length = 170969

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     tacaaaatacagaaaggcaca 63
              |||||||||||||||||||||
Sbjct: 133380 tacaaaatacagaaaggcaca 133400
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>gb|AC105110.5| Homo sapiens chromosome 18, clone CTD-2301P8, complete sequence
          Length = 95735

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tgcttccatacaaaatacaga 55
             |||||||||||||||||||||
Sbjct: 46163 tgcttccatacaaaatacaga 46183
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>gb|AC108452.3| Homo sapiens chromosome 18, clone RP11-60G10, complete sequence
          Length = 160769

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tgcttccatacaaaatacaga 55
             |||||||||||||||||||||
Sbjct: 23930 tgcttccatacaaaatacaga 23950
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 618      tcttgtggtgtgcgttgtgac 638
                |||||||||||||||||||||
Sbjct: 29503609 tcttgtggtgtgcgttgtgac 29503629
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>gb|AC127383.4| Homo sapiens BAC clone RP11-1388F24 from 2, complete sequence
          Length = 122168

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 458   ttcaaccatatggagtgatgg 478
             |||||||||||||||||||||
Sbjct: 62646 ttcaaccatatggagtgatgg 62666
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>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 222712

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    cagataaatgaccttttcttc 525
              |||||||||||||||||||||
Sbjct: 110941 cagataaatgaccttttcttc 110961
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>gb|AC003971.1|AC003971 Human BAC 367D17 from chromosome 18, complete sequence
          Length = 87978

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    tacaaaatacagaaaggcaca 63
             |||||||||||||||||||||
Sbjct: 32501 tacaaaatacagaaaggcaca 32521
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>ref|XM_522893.1| PREDICTED: Pan troglodytes similar to a disintegrin and
           metalloproteinase domain 20 preproprotein (LOC467496),
           mRNA
          Length = 2103

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 tgctacagataaatgacctt 519
           ||||||||||||||||||||
Sbjct: 554 tgctacagataaatgacctt 573
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>ref|XM_516552.1| PREDICTED: Pan troglodytes similar to axonemal dynein heavy chain 7
            (LOC460471), mRNA
          Length = 7941

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ataaatgaccttttcttcct 527
            ||||||||||||||||||||
Sbjct: 4977 ataaatgaccttttcttcct 4958
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>gb|AC146066.4| Pan troglodytes BAC clone RP43-60F19 from 7, complete sequence
          Length = 183557

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 545    tttcatcttataattttgtt 564
              ||||||||||||||||||||
Sbjct: 121384 tttcatcttataattttgtt 121365
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>ref|NM_003814.4| Homo sapiens ADAM metallopeptidase domain 20 (ADAM20), mRNA
          Length = 2807

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 tgctacagataaatgacctt 519
           ||||||||||||||||||||
Sbjct: 799 tgctacagataaatgacctt 818
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>gb|BC025378.1| Homo sapiens ADAM metallopeptidase domain 20, mRNA (cDNA clone
           MGC:25993 IMAGE:4827383), complete cds
          Length = 2810

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 tgctacagataaatgacctt 519
           ||||||||||||||||||||
Sbjct: 802 tgctacagataaatgacctt 821
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>ref|XM_541831.2| PREDICTED: Canis familiaris similar to axonemal dynein heavy chain 7
            (LOC484715), mRNA
          Length = 12076

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ataaatgaccttttcttcct 527
            ||||||||||||||||||||
Sbjct: 4950 ataaatgaccttttcttcct 4931
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>gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complete sequence
          Length = 135317

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 542   cagtttcatcttataattttgttt 565
             ||||||||||||||| ||||||||
Sbjct: 65771 cagtttcatcttatagttttgttt 65748
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>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence
          Length = 206497

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 522   cttcctgtcttgtcacctttcagt 545
             ||||||||| ||||||||||||||
Sbjct: 13774 cttcctgtcatgtcacctttcagt 13797
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>gb|AC003079.2| Homo sapiens BAC clone GS1-303P24 from 7, complete sequence
          Length = 62331

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 545  tttcatcttataattttgtt 564
            ||||||||||||||||||||
Sbjct: 9755 tttcatcttataattttgtt 9774
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>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   gtgttggattcagttttcca 379
             ||||||||||||||||||||
Sbjct: 37191 gtgttggattcagttttcca 37172
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>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone  F23E12 (ESSA project)
          Length = 86710

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   gtgttggattcagttttcca 379
             ||||||||||||||||||||
Sbjct: 66160 gtgttggattcagttttcca 66179
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>emb|BX927211.4| Zebrafish DNA sequence from clone CH211-112A3, complete sequence
          Length = 65572

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 357   attgtgttggattcagttttccacacaa 384
             ||||||||||||||| ||||| ||||||
Sbjct: 33764 attgtgttggattcacttttcaacacaa 33791
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 227     catcgatgcggtgccggaga 246
               ||||||||||||||||||||
Sbjct: 1017276 catcgatgcggtgccggaga 1017257
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>gb|AC008165.3|AC008165 Homo sapiens BAC clone RP11-139L10 from 7p22, complete sequence
          Length = 85404

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   attcagttttccacacaatg 386
             ||||||||||||||||||||
Sbjct: 21302 attcagttttccacacaatg 21321
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>gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, complete sequence
          Length = 175263

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   attcagttttccacacaatg 386
             ||||||||||||||||||||
Sbjct: 64895 attcagttttccacacaatg 64914
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>gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, complete sequence
          Length = 169754

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   attcagttttccacacaatg 386
             ||||||||||||||||||||
Sbjct: 57914 attcagttttccacacaatg 57933
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>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence
          Length = 164500

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   ataaatgaccttttcttcct 527
             ||||||||||||||||||||
Sbjct: 24048 ataaatgaccttttcttcct 24067
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>gb|AF158643.1|AF158643 Homo sapiens metalloproteinase-disintegrin (ADAM20) gene, complete
           cds
          Length = 3314

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 tgctacagataaatgacctt 519
           ||||||||||||||||||||
Sbjct: 872 tgctacagataaatgacctt 891
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>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   tgctacagataaatgacctt 519
             ||||||||||||||||||||
Sbjct: 65796 tgctacagataaatgacctt 65777
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>gb|AF029899.1|AF029899 Homo sapiens ADAM 20 mRNA, complete cds
          Length = 2442

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 tgctacagataaatgacctt 519
           ||||||||||||||||||||
Sbjct: 432 tgctacagataaatgacctt 451
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>emb|AL929586.19| Zebrafish DNA sequence from clone CH211-188I17, complete sequence
          Length = 154808

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     acaaaatacagaaaggcaca 63
              ||||||||||||||||||||
Sbjct: 121221 acaaaatacagaaaggcaca 121240
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>emb|AL928665.8| Mouse DNA sequence from clone RP23-294O23 on chromosome 2, complete
             sequence
          Length = 81950

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 542   cagtttcatcttataattttgttt 565
             ||||||||||||||| ||||||||
Sbjct: 37870 cagtttcatcttatagttttgttt 37893


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,103,279
Number of Sequences: 3902068
Number of extensions: 5103279
Number of successful extensions: 92995
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92844
Number of HSP's gapped (non-prelim): 146
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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