>gb|AC126244.3| Mus musculus BAC clone RP24-319A6 from chromosome 12, complete sequence
          Length = 175549

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   actgaaacccactcatcactt 172
             |||||||||||||||||||||
Sbjct: 31049 actgaaacccactcatcactt 31069

>gb|AC079848.16| Homo sapiens 3 BAC RP11-124N2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161987

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    atgacaaaattatttcatcac 88
             |||||||||||||||||||||
Sbjct: 23108 atgacaaaattatttcatcac 23128

>dbj|AK097508.1| Homo sapiens cDNA FLJ40189 fis, clone TESTI2018974
          Length = 2232

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 68   atgacaaaattatttcatcac 88
            |||||||||||||||||||||
Sbjct: 1578 atgacaaaattatttcatcac 1558

>gb|AC153658.4| Mus musculus BAC clone RP23-272J19 from chromosome 12, complete sequence
          Length = 202978

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 152    actgaaacccactcatcactt 172
              |||||||||||||||||||||
Sbjct: 169174 actgaaacccactcatcactt 169194

>gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosome 12, complete
             sequence
          Length = 185536

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   actgaaacccactcatcactt 172
             |||||||||||||||||||||
Sbjct: 11320 actgaaacccactcatcactt 11340

>gb|AC021850.8|AC021850 Homo sapiens BAC clone RP11-389E17 from 4, complete sequence
          Length = 206966

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 112   aaaagggttcctgtatgaagaatgccaagagga 144
             |||||| ||||||||||| |||||||| |||||
Sbjct: 65418 aaaaggcttcctgtatgatgaatgccacgagga 65386

>emb|AL772194.6| Mouse DNA sequence from clone RP23-331M18 on chromosome 4, complete
             sequence
          Length = 176496

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    caccatgacaaaattatttca 84
             |||||||||||||||||||||
Sbjct: 83830 caccatgacaaaattatttca 83850

>gb|BC039521.1| Homo sapiens, clone IMAGE:5728468, mRNA
          Length = 1916

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 68   atgacaaaattatttcatcac 88
            |||||||||||||||||||||
Sbjct: 1238 atgacaaaattatttcatcac 1218

>gb|AC104851.2| Homo sapiens chromosome 3 clone RP11-475N4, complete sequence
          Length = 160039

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    ctccgctccacttttctggga 43
             |||||||||||||||||||||
Sbjct: 94435 ctccgctccacttttctggga 94415

>gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, complete sequence
          Length = 171392

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   cactcatcactttcttttta 180
             ||||||||||||||||||||
Sbjct: 39611 cactcatcactttcttttta 39630

>gb|DQ496100.1| Homo sapiens hephaestin (HEPH) gene, complete cds
          Length = 108572

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   tcagctgagagaagtggaat 283
             ||||||||||||||||||||
Sbjct: 34002 tcagctgagagaagtggaat 33983

>gb|AC160248.6| Pan troglodytes BAC clone CH251-541A22 from chromosome unknown,
             complete sequence
          Length = 182426

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   actcatcactttctttttaa 181
             ||||||||||||||||||||
Sbjct: 75755 actcatcactttctttttaa 75736

>emb|AL139188.14| Human DNA sequence from clone RP11-90M5 on chromosome 13q12.11-12.3
             Contains 2 novel genes, a translocase of inner
             mitochondrial membrane 8 (yeast) homolog B (TIMM8B)
             pseudogene, the 5' end of the UBL3 gene for ubiquitin-like
             3 and a CpG island, complete sequence
          Length = 161538

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   actcatcactttctttttaa 181
             ||||||||||||||||||||
Sbjct: 47778 actcatcactttctttttaa 47759

>emb|AL030998.1|HS466I8 Human DNA sequence from clone RP3-466I8 on chromosome Xq11.1-13.2
             Contains the 5' end of the HEPH gene for hephaestin,
             complete sequence
          Length = 118226

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   tcagctgagagaagtggaat 283
             ||||||||||||||||||||
Sbjct: 57035 tcagctgagagaagtggaat 57054

>gb|AC092944.14| Homo sapiens 3 BAC RP11-550I24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184688

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    aggaaaacactgaaacccac 163
              ||||||||||||||||||||
Sbjct: 173682 aggaaaacactgaaacccac 173701

>dbj|AK075351.1| Homo sapiens cDNA PSEC0033 fis, clone NT2RP1000659, highly similar to
            ATP SYNTHASE LIPID-BINDING PROTEIN P2 PRECURSOR (EC
            3.6.1.34)
          Length = 1977

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 101  tgttgcttcacaaaagggttcctg 124
            |||||||||| |||||||||||||
Sbjct: 1740 tgttgcttcagaaaagggttcctg 1717

>gb|AC109999.2| Homo sapiens chromosome 5 clone CTD-2265M6, complete sequence
          Length = 143750

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   aagaggaggaaaacactgaa 157
             ||||||||||||||||||||
Sbjct: 16909 aagaggaggaaaacactgaa 16890

>gb|AC011374.6| Homo sapiens chromosome 5 clone CTB-113P19, complete sequence
          Length = 203961

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    aagaggaggaaaacactgaa 157
              ||||||||||||||||||||
Sbjct: 147733 aagaggaggaaaacactgaa 147714

>gb|AC155830.7| Mus musculus 10 BAC RP24-495I3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 189267

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   ttcaactggtcaaaataagt 211
             ||||||||||||||||||||
Sbjct: 95909 ttcaactggtcaaaataagt 95890

>emb|AL691424.7| Mouse DNA sequence from clone RP23-219K12 on chromosome X, complete
              sequence
          Length = 194520

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gggttcctgtatgaagaatg 135
              ||||||||||||||||||||
Sbjct: 159058 gggttcctgtatgaagaatg 159039


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,198,405
Number of Sequences: 3902068
Number of extensions: 3198405
Number of successful extensions: 56639
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56609
Number of HSP's gapped (non-prelim): 30
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)