Clone Name	rbags35d09
Clone Library Name	barley_pub

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No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	381	e-105
2	RL3B_ARATH (P22738) 60S ribosomal protein L3	353	2e-97
3	RL3A_ARATH (P17094) 60S ribosomal protein L3	352	7e-97
4	RL3_TOXCA (P49149) 60S ribosomal protein L3	271	9e-73
5	RL3_DROME (O16797) 60S ribosomal protein L3	269	4e-72
6	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	267	2e-71
7	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	265	6e-71
8	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	265	8e-71
9	RL3_BOVIN (P39872) 60S ribosomal protein L3	265	8e-71
10	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	263	2e-70
11	RL3_CAEEL (P50880) 60S ribosomal protein L3	260	3e-69
12	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	259	3e-69
13	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	258	7e-69
14	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	258	1e-68
15	RL3_DICDI (P34113) 60S ribosomal protein L3	257	2e-68
16	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	256	5e-68
17	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	254	1e-67
18	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	253	2e-67
19	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	253	4e-67
20	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	252	7e-67
21	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	251	2e-66
22	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	251	2e-66
23	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	249	3e-66
24	RL3_NEUCR (P59671) 60S ribosomal protein L3	249	3e-66
25	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	232	8e-61
26	RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)	169	5e-42
27	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	149	5e-36
28	RL3_PYRHO (O59418) 50S ribosomal protein L3P	147	2e-35
29	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	147	3e-35
30	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	135	7e-32
31	RL3_METJA (P54014) 50S ribosomal protein L3P	131	1e-30
32	RL3_ARCFU (O28354) 50S ribosomal protein L3P	130	4e-30
33	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	127	3e-29
34	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	121	1e-27
35	RL3_METTH (O26110) 50S ribosomal protein L3P	119	5e-27
36	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	119	7e-27
37	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	119	7e-27
38	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	115	1e-25
39	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	107	2e-23
40	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	107	4e-23
41	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	106	5e-23
42	RL3_NANEQ (P60458) 50S ribosomal protein L3P	106	6e-23
43	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	104	2e-22
44	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	104	2e-22
45	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	102	9e-22
46	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	101	2e-21
47	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	101	2e-21
48	RL3_CLOTE (Q890N9) 50S ribosomal protein L3	53	6e-07
49	RL3_ENTFA (Q839G4) 50S ribosomal protein L3	51	3e-06
50	RL3_CLOAB (Q97EH8) 50S ribosomal protein L3	50	4e-06
51	RL3_BACST (P28600) 50S ribosomal protein L3	49	9e-06
52	RL3_PORGI (Q7MTL3) 50S ribosomal protein L3	49	9e-06
53	RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3	47	3e-05
54	RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor	47	3e-05
55	RL3_BACTN (Q8A476) 50S ribosomal protein L3	47	6e-05
56	RL3_BACCR (Q81J42) 50S ribosomal protein L3	46	1e-04
57	RL3_BACAN (Q81VT0) 50S ribosomal protein L3	46	1e-04
58	RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3	45	2e-04
59	RL3_BIFLO (Q8G417) 50S ribosomal protein L3	45	2e-04
60	RL3_LISMO (Q8Y440) 50S ribosomal protein L3	45	2e-04
61	RL3_LISMF (Q71WE6) 50S ribosomal protein L3	45	2e-04
62	RL3_LISIN (Q927K7) 50S ribosomal protein L3	45	2e-04
63	RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3	44	4e-04
64	RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)	44	4e-04
65	RL3_MYCPU (Q98PY0) 50S ribosomal protein L3	44	4e-04
66	RL3_STRP6 (Q5XED5) 50S ribosomal protein L3	44	5e-04
67	RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3	44	5e-04
68	RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3	44	5e-04
69	RL3_TROWT (Q83FY6) 50S ribosomal protein L3	44	5e-04
70	RL3_TROW8 (Q83I78) 50S ribosomal protein L3	44	5e-04
71	RL3_THETN (Q8R7V4) 50S ribosomal protein L3	44	5e-04
72	RL3_SPIKU (P60457) 50S ribosomal protein L3	43	6e-04
73	RL3_THEMA (P38515) 50S ribosomal protein L3	43	6e-04
74	RL3_STRP8 (P60452) 50S ribosomal protein L3	42	0.001
75	RL3_STRP3 (P60451) 50S ribosomal protein L3	42	0.001
76	RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3	42	0.001
77	RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3	42	0.001
78	RL3_AQUAE (O66431) 50S ribosomal protein L3	42	0.001
79	RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.001
80	RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.001
81	RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3	42	0.001
82	RL3_STRMU (Q8DS16) 50S ribosomal protein L3	42	0.002
83	RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) ...	42	0.002
84	RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.002
85	RL3_STAAW (P60450) 50S ribosomal protein L3	41	0.002
86	RL3_STAAS (Q6G771) 50S ribosomal protein L3	41	0.002
87	RL3_STAAR (Q6GEI3) 50S ribosomal protein L3	41	0.002
88	RL3_STAAN (P60449) 50S ribosomal protein L3	41	0.002
89	RL3_STAAM (P60448) 50S ribosomal protein L3	41	0.002
90	RL3_STAAC (Q5HDV8) 50S ribosomal protein L3	41	0.002
91	RL3_CORDI (P60453) 50S ribosomal protein L3	41	0.002
92	RL3_LEPIN (Q9XD36) 50S ribosomal protein L3	40	0.004
93	RL3_LEPIC (Q72NG1) 50S ribosomal protein L3	40	0.004
94	RL3_MYCCT (P10134) 50S ribosomal protein L3	40	0.005
95	RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3	40	0.005
96	RL3_STRPN (Q97SV5) 50S ribosomal protein L3	40	0.005
97	RL3_THETH (P52860) 50S ribosomal protein L3	40	0.007
98	RL3_THET8 (Q5SHN8) 50S ribosomal protein L3	40	0.007
99	RL3_GEOSL (P60454) 50S ribosomal protein L3	40	0.007
100	RL3_STAES (Q8CRG0) 50S ribosomal protein L3	39	0.009
101	RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3	39	0.009
102	RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast prec...	39	0.009
103	RL3_CORGL (Q8NT09) 50S ribosomal protein L3	39	0.009
104	RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3	39	0.012
105	RL3_NEIMB (P60444) 50S ribosomal protein L3	39	0.012
106	RL3_NEIMA (P60443) 50S ribosomal protein L3	39	0.012
107	RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3	39	0.016
108	RL3_COREF (Q8FS80) 50S ribosomal protein L3	38	0.027
109	RL3_VIBPA (Q87T13) 50S ribosomal protein L3	38	0.027
110	RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase...	38	0.027
111	RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase...	38	0.027
112	RL3_BUCBP (Q89A68) 50S ribosomal protein L3	37	0.035
113	RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase...	37	0.035
114	RL3_BORPE (Q7VTD3) 50S ribosomal protein L3	37	0.035
115	RL3_BORPA (Q7W2F6) 50S ribosomal protein L3	37	0.035
116	RL3_BORBR (Q7WRC5) 50S ribosomal protein L3	37	0.035
117	RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3	37	0.046
118	RL3_CHLCV (Q824Q1) 50S ribosomal protein L3	37	0.046
119	RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3	37	0.046
120	RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3	37	0.046
121	RL3_VIBVU (Q8DE39) 50S ribosomal protein L3	37	0.046
122	RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3	37	0.046
123	RL3_BUCAP (Q8K950) 50S ribosomal protein L3	37	0.046
124	RL3_MYCGA (O52332) 50S ribosomal protein L3	37	0.061
125	RL3_TREPA (O83219) 50S ribosomal protein L3	37	0.061
126	RL3_BORBU (P94267) 50S ribosomal protein L3	36	0.079
127	RL3_MYCTU (P60442) 50S ribosomal protein L3	36	0.079
128	RL3_MYCBO (P60441) 50S ribosomal protein L3	36	0.079
129	RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3	36	0.079
130	RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3	36	0.079
131	RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast prec...	36	0.10
132	RL3_LACPL (Q88XY6) 50S ribosomal protein L3	36	0.10
133	RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial prec...	35	0.13
134	RL3_XANCP (Q8PC49) 50S ribosomal protein L3	35	0.13
135	RL3_XANAC (Q8PNS4) 50S ribosomal protein L3	35	0.13
136	RL3_COXBU (Q83ES4) 50S ribosomal protein L3	35	0.13
137	RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)	35	0.18
138	RL3_BRAPL (Q9FA04) 50S ribosomal protein L3	35	0.18
139	RL3_MYCLE (P30762) 50S ribosomal protein L3	35	0.18
140	RL3_HAEIN (P44344) 50S ribosomal protein L3	35	0.18
141	RL3_BUCAI (P57591) 50S ribosomal protein L3	35	0.23
142	RL3_PSESM (Q889X1) 50S ribosomal protein L3	34	0.30
143	RL3_LACLA (Q9CDW2) 50S ribosomal protein L3	34	0.30
144	RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3	34	0.30
145	RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3	34	0.30
146	RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3	34	0.30
147	RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3	34	0.39
148	RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3	34	0.39
149	RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precurs...	34	0.39
150	RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3	34	0.39
151	RL3_PASMU (Q9CL32) 50S ribosomal protein L3	34	0.39
152	RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3	34	0.39
153	RL3_CHLTR (O84533) 50S ribosomal protein L3	33	0.51
154	FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal bo...	33	0.67
155	RL3_MYCGE (P47397) 50S ribosomal protein L3	33	0.67
156	RL3_RALSO (Q8XV12) 50S ribosomal protein L3	33	0.67
157	RL3_XYLFA (Q9PE76) 50S ribosomal protein L3	33	0.67
158	RL3_STRAW (Q82DP5) 50S ribosomal protein L3	33	0.67
159	RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3	33	0.87
160	RL3_MYCPN (P75580) 50S ribosomal protein L3	33	0.87
161	RL3_XYLFT (Q87E82) 50S ribosomal protein L3	33	0.87
162	FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal bo...	32	1.1
163	RL3_PSEPK (Q88QN5) 50S ribosomal protein L3	32	1.1
164	RL3_YERPS (P11252) 50S ribosomal protein L3	32	1.1
165	RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3	32	1.1
166	RL3_ONYPE (P60455) 50S ribosomal protein L3	32	1.5
167	RL3_WIGBR (Q8D212) 50S ribosomal protein L3	32	1.5
168	RL3_STRCO (Q9L0E0) 50S ribosomal protein L3	32	1.5
169	RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3	32	1.5
170	RL3_SHEON (Q8EK68) 50S ribosomal protein L3	32	1.9
171	RL3_SHIFL (P60447) 50S ribosomal protein L3	32	1.9
172	RL3_SALTY (P60446) 50S ribosomal protein L3	32	1.9
173	RL3_SALTI (P60445) 50S ribosomal protein L3	32	1.9
174	RL3_ECOLI (P60438) 50S ribosomal protein L3	32	1.9
175	RL3_ECOL6 (P60439) 50S ribosomal protein L3	32	1.9
176	RL3_ECO57 (P60440) 50S ribosomal protein L3	32	1.9
177	CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (...	31	2.5
178	IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)	31	3.3
179	IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)	31	3.3
180	RL3_BRAJA (Q89J84) 50S ribosomal protein L3	31	3.3
181	RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)	30	4.3
182	RL3_PROMM (Q7V542) 50S ribosomal protein L3	30	4.3
183	PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)	30	4.3
184	ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor...	30	4.3
185	RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)	30	4.3
186	RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase...	30	4.3
187	HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	30	4.3
188	POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)	30	5.7
189	BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3...	30	5.7
190	RL3_RHOBA (Q7UN20) 50S ribosomal protein L3	30	5.7
191	PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)	30	7.4
192	RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3	30	7.4
193	LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A ...	29	9.7
194	RL3_NITEU (Q82X88) 50S ribosomal protein L3	29	9.7

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>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  381 bits (978), Expect = e-105
 Identities = 181/191 (94%), Positives = 186/191 (97%)
 Frame = -1

Query: 618 GYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 439
           GY FFEKE+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA
Sbjct: 197 GYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 256

Query: 438 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPH 259
           WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK GQE+H A TEFDRTEKDITPMGGFPH
Sbjct: 257 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPH 316

Query: 258 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 79
           YGVVK DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQTT
Sbjct: 317 YGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTT 376

Query: 78  DEKQRFYGKLK 46
           DEKQRF+GKLK
Sbjct: 377 DEKQRFFGKLK 387

---

>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  353 bits (906), Expect = 2e-97
 Identities = 163/187 (87%), Positives = 178/187 (95%)
 Frame = -1

Query: 612 NFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 433
           + FEK+VP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH
Sbjct: 199 SLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 258

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYG 253
           PARVSYTVARAGQNGYHHRTEMNKKVY++GKVGQETH A TE+DRTEKDITPMGGFPHYG
Sbjct: 259 PARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYG 318

Query: 252 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDE 73
           +VK DYLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKF+D +S  GHGRFQT+ E
Sbjct: 319 IVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQE 378

Query: 72  KQRFYGK 52
           K +FYG+
Sbjct: 379 KAKFYGR 385

---

>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  352 bits (902), Expect = 7e-97
 Identities = 163/189 (86%), Positives = 179/189 (94%)
 Frame = -1

Query: 615 YNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 436
           Y+FFEK++PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW
Sbjct: 198 YSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 257

Query: 435 HPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHY 256
           HPARVSYTVARAGQNGYHHRTE+NKK+Y++GKVG E H A TE+DRTEKD+TPMGGFPHY
Sbjct: 258 HPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHY 317

Query: 255 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 76
           G+VK DYLMIKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKF+DT+S FGHGRFQT+ 
Sbjct: 318 GIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSL 377

Query: 75  EKQRFYGKL 49
           EK RFY ++
Sbjct: 378 EKMRFYNRV 386

---

>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  271 bits (694), Expect = 9e-73
 Identities = 124/189 (65%), Positives = 155/189 (82%), Gaps = 3/189 (1%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           EK+VP+D+VF +DEMID IGVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+R
Sbjct: 201 EKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYG 253
           V +TVARAGQ GYHHRTE+NKK+Y++GK     +   +  T++D TEK + PMGGFPHYG
Sbjct: 261 VQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYG 320

Query: 252 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDE 73
           +V  D++MI+GCCVG KKR +TLR+SL+ QT R A E+I LK++DTSSKFGHGRFQT  E
Sbjct: 321 LVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAE 380

Query: 72  KQRFYGKLK 46
           K+ F GKLK
Sbjct: 381 KRAFMGKLK 389

---

>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  269 bits (688), Expect = 4e-72
 Identities = 129/193 (66%), Positives = 153/193 (79%), Gaps = 7/193 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           EK + +  VF +DEMID +GVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+R
Sbjct: 201 EKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGF 265
           VS TVARAGQ GYHHRTE+NKK+Y+IG  G  T D       ASTE+D T+K ITPMGGF
Sbjct: 261 VSTTVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKSITPMGGF 319

Query: 264 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 85
           PHYG V  D++MIKGCC+G KKR++TLR+SLLK T R ALE+IKLKF+DTSSK GHGRFQ
Sbjct: 320 PHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQ 379

Query: 84  TTDEKQRFYGKLK 46
           T  +K  F G LK
Sbjct: 380 TPADKLAFMGPLK 392

---

>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  267 bits (682), Expect = 2e-71
 Identities = 128/192 (66%), Positives = 159/192 (82%), Gaps = 6/192 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR
Sbjct: 201 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFP 262
           V++TVARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF 
Sbjct: 261 VAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV 320

Query: 261 HYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQT 82
           HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT
Sbjct: 321 HYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQT 380

Query: 81  TDEKQRFYGKLK 46
            +EK+ F G LK
Sbjct: 381 MEEKKAFMGPLK 392

---

>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  265 bits (678), Expect = 6e-71
 Identities = 127/192 (66%), Positives = 159/192 (82%), Gaps = 6/192 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR
Sbjct: 201 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFP 262
           V+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF 
Sbjct: 261 VAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV 320

Query: 261 HYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQT 82
           HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT
Sbjct: 321 HYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQT 380

Query: 81  TDEKQRFYGKLK 46
            +EK+ F G LK
Sbjct: 381 MEEKKAFMGPLK 392

---

>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  265 bits (677), Expect = 8e-71
 Identities = 127/192 (66%), Positives = 159/192 (82%), Gaps = 6/192 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR
Sbjct: 201 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFP 262
           V+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF 
Sbjct: 261 VAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV 320

Query: 261 HYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQT 82
           HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT
Sbjct: 321 HYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQT 380

Query: 81  TDEKQRFYGKLK 46
            +EK+ F G LK
Sbjct: 381 MEEKKAFMGPLK 392

---

>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  265 bits (677), Expect = 8e-71
 Identities = 127/192 (66%), Positives = 158/192 (82%), Gaps = 6/192 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           E++VP+  VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR
Sbjct: 201 EQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFP 262
           V+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF 
Sbjct: 261 VAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV 320

Query: 261 HYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQT 82
           HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT
Sbjct: 321 HYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQT 380

Query: 81  TDEKQRFYGKLK 46
            +EK+ F G LK
Sbjct: 381 VEEKKAFMGPLK 392

---

>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  263 bits (673), Expect = 2e-70
 Identities = 127/187 (67%), Positives = 150/187 (80%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V +D+VF+++EMID+I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA
Sbjct: 200 FEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPA 259

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V +TVARAGQNGYHHRT +N KVY+IGK G E  +A+TEFDRT+K ITPMGGF HYG V
Sbjct: 260 HVMWTVARAGQNGYHHRTSINHKVYRIGKGGDE-GNAATEFDRTKKTITPMGGFVHYGAV 318

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 67
             D++M+KG   G +KRVVTLR+SL   TSR ALEE+ LK++DT+SKFG GRFQT  EK 
Sbjct: 319 NNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKH 378

Query: 66  RFYGKLK 46
            F G LK
Sbjct: 379 AFMGTLK 385

---

>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  260 bits (664), Expect = 3e-69
 Identities = 120/189 (63%), Positives = 154/189 (81%), Gaps = 3/189 (1%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           EK+V +D VF +DEMID IGVT+G G++GV +RW   +LPRKTH+GLRKVACIGAWHP+R
Sbjct: 202 EKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 261

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYG 253
           V++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STEFD T+K ITPMGGFP YG
Sbjct: 262 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYG 321

Query: 252 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDE 73
           +V  DY+M++G  +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT E
Sbjct: 322 IVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 381

Query: 72  KQRFYGKLK 46
           K+ F GKLK
Sbjct: 382 KRAFMGKLK 390

---

>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  259 bits (663), Expect = 3e-69
 Identities = 126/192 (65%), Positives = 158/192 (82%), Gaps = 6/192 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGA HPAR
Sbjct: 201 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPAR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFP 262
           V+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF 
Sbjct: 261 VAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV 320

Query: 261 HYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQT 82
           HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT
Sbjct: 321 HYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQT 380

Query: 81  TDEKQRFYGKLK 46
            +EK+ F G LK
Sbjct: 381 MEEKKAFMGPLK 392

---

>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  258 bits (660), Expect = 7e-69
 Identities = 121/189 (64%), Positives = 152/189 (80%)
 Frame = -1

Query: 612 NFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 433
           N FEK + ID++F+KDEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKVACIGAWH
Sbjct: 198 NLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWH 257

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYG 253
           P+ V +TVARAGQ GYHHRT  N KV++IGK G +  +AST+FD ++K ITPMGGF  YG
Sbjct: 258 PSHVQWTVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGFVRYG 316

Query: 252 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDE 73
            VK DY+M+KG   G KKRV+TLR++L  QTSR A E+++LK++DTSSKFGHG FQT +E
Sbjct: 317 EVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEE 376

Query: 72  KQRFYGKLK 46
           K+ F G LK
Sbjct: 377 KRAFMGTLK 385

---

>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  258 bits (659), Expect = 1e-68
 Identities = 119/189 (62%), Positives = 153/189 (80%), Gaps = 3/189 (1%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           EK++ +D VF +DEMID IGVTKG G++GV +RW   +LPRKTH+GLRKVACIGAWHP+R
Sbjct: 202 EKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 261

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYG 253
           V++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STEFD T+K I PMGGFP YG
Sbjct: 262 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYG 321

Query: 252 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDE 73
           +V  DY+M++G  +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT E
Sbjct: 322 LVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 381

Query: 72  KQRFYGKLK 46
           K+ F GKLK
Sbjct: 382 KRAFMGKLK 390

---

>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  257 bits (656), Expect = 2e-68
 Identities = 119/191 (62%), Positives = 149/191 (78%), Gaps = 4/191 (2%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V +  VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+
Sbjct: 201 FEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPS 260

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKV----GQETHDASTEFDRTEKDITPMGGFPH 259
           RVS TV RAGQ GYHHR E NKK+Y+IG+     G++     TEFD TEK I PMGGF H
Sbjct: 261 RVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAH 320

Query: 258 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 79
           YG+VK ++LM+KGC  GP+KR +TLR+S+  QT R ALE+I LKF+DTSSKFGHG  QT 
Sbjct: 321 YGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTA 380

Query: 78  DEKQRFYGKLK 46
           ++K +++G  K
Sbjct: 381 EDKTKYFGVKK 391

---

>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  256 bits (653), Expect = 5e-68
 Identities = 120/187 (64%), Positives = 149/187 (79%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V +D+VF+++EMID++ VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA
Sbjct: 199 FEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPA 258

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V ++VARAGQ GYHHRT +N KVY++GK G +  +A+TEFDRT+K ITPMGGF HYG +
Sbjct: 259 HVMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGFVHYGAI 317

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 67
             D++++KG   G +KRVVTLR+SL   TSR ALEE+ LK++DT+SKFG GRFQT  EK 
Sbjct: 318 NNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKH 377

Query: 66  RFYGKLK 46
            F G LK
Sbjct: 378 AFLGTLK 384

---

>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  254 bits (649), Expect = 1e-67
 Identities = 119/187 (63%), Positives = 147/187 (78%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V +D+VF+++EMID I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA
Sbjct: 198 FEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPA 257

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V ++VARAGQ GYH RT +N K+Y++GK G +  + +T FDRT+K ITPMGGF HYG +
Sbjct: 258 HVMWSVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGFVHYGEI 316

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 67
           K D++M+KGC  G +KR+VTLR+SL   TSR ALEE+ LK++DT+SKFG GRFQT  EK 
Sbjct: 317 KNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKH 376

Query: 66  RFYGKLK 46
            F G LK
Sbjct: 377 AFMGTLK 383

---

>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  253 bits (647), Expect = 2e-67
 Identities = 120/193 (62%), Positives = 150/193 (77%), Gaps = 7/193 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           EK+VP+ +VF ++E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPAR
Sbjct: 201 EKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPAR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGF 265
           V  ++ARAGQ GYHHRTE+NKK+Y+IG+ G    D       AST +D T+K ITP+GGF
Sbjct: 261 VGCSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKSITPLGGF 319

Query: 264 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 85
           PHYG V  D++M+KGC  G KKRV+TLR+SLL   SR ALE I+LKF+DT+SKFGHGRFQ
Sbjct: 320 PHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQ 379

Query: 84  TTDEKQRFYGKLK 46
           T  EK+ F G  K
Sbjct: 380 TAQEKRAFMGPQK 392

---

>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  253 bits (645), Expect = 4e-67
 Identities = 121/187 (64%), Positives = 147/187 (78%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V +D+VF+++EMID I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA
Sbjct: 199 FEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPA 258

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V ++VARAGQ GYHHRT +N K+Y+IGK G +  +A+T FDRT+K I PMGGF HYG+V
Sbjct: 259 HVMWSVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGFVHYGMV 317

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 67
             D++M+KG   G KKRVVTLR+SL   TSR A+EE+ LK++DT+SKFG GRFQT  EK 
Sbjct: 318 NNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKH 377

Query: 66  RFYGKLK 46
            F G LK
Sbjct: 378 AFMGTLK 384

---

>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  252 bits (643), Expect = 7e-67
 Identities = 119/187 (63%), Positives = 144/187 (77%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V +D+VF+KDEM+D+  VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA
Sbjct: 199 FEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPA 258

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V +TVARAGQNG+HHRT +N KVY++G  G E+  A TEFDRT+K I PMGGF  YG V
Sbjct: 259 NVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNV 317

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 67
           K D++++KG   G KKR+VT+R+SL   TSR A E + LK++DT+SKFG GRFQT  EK 
Sbjct: 318 KNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKH 377

Query: 66  RFYGKLK 46
            F G LK
Sbjct: 378 AFLGTLK 384

---

>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  251 bits (640), Expect = 2e-66
 Identities = 120/187 (64%), Positives = 146/187 (78%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V I + F+++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA
Sbjct: 198 FEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPA 257

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF  YGVV
Sbjct: 258 NVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVV 316

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 67
           + D++M+ G   GP KRV+TLR+SLL  TSR ALE + LK++DT+SKFGHGRFQT  E +
Sbjct: 317 ENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAK 376

Query: 66  RFYGKLK 46
           +F G LK
Sbjct: 377 QFLGTLK 383

---

>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  251 bits (640), Expect = 2e-66
 Identities = 120/187 (64%), Positives = 146/187 (78%)
 Frame = -1

Query: 606 FEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 427
           FEK V I + F+++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA
Sbjct: 198 FEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPA 257

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF  YGVV
Sbjct: 258 NVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVV 316

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 67
           + D++M+ G   GP KRV+TLR+SLL  TSR ALE + LK++DT+SKFGHGRFQT  E +
Sbjct: 317 ENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAK 376

Query: 66  RFYGKLK 46
           +F G LK
Sbjct: 377 QFLGTLK 383

---

>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  249 bits (637), Expect = 3e-66
 Identities = 118/193 (61%), Positives = 148/193 (76%), Gaps = 7/193 (3%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           EK+VP+ +VF + E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPAR
Sbjct: 201 EKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPAR 260

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGF 265
           V  ++ARAGQ GYHHRTE+NKK+++IG+ G    D       AST +D T K ITP+GGF
Sbjct: 261 VGCSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKSITPLGGF 319

Query: 264 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 85
           PHYG V  D++M+KGC  G KKRV+TLR+SLL   SR A+E I+LKF+DT+SKFGHGRFQ
Sbjct: 320 PHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQ 379

Query: 84  TTDEKQRFYGKLK 46
           T  EK+ F G  K
Sbjct: 380 TAQEKRAFMGPQK 392

---

>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  249 bits (637), Expect = 3e-66
 Identities = 117/191 (61%), Positives = 148/191 (77%)
 Frame = -1

Query: 618 GYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 439
           G+  FEK V ID++F+KDE+ID+I VTKG G+ GV  RWG  +LPRKTH+GLRKVACIGA
Sbjct: 196 GHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGA 255

Query: 438 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPH 259
           WHP+ V +TVARAGQ GYHHRT +N K+Y+IGK G     A+TE D T+K ITPMGGF  
Sbjct: 256 WHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGFVR 314

Query: 258 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 79
           YG +  D++M+KG   G KKRV+TLR+S+   TSR ALE+++LK++DTSS+FGHG FQT 
Sbjct: 315 YGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTP 374

Query: 78  DEKQRFYGKLK 46
            EK++F G LK
Sbjct: 375 AEKKQFQGTLK 385

---

>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  232 bits (591), Expect = 8e-61
 Identities = 115/186 (61%), Positives = 143/186 (76%)
 Frame = -1

Query: 603 EKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 424
           EKE+ I  VF  +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+R
Sbjct: 196 EKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSR 255

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 244
           V Y++ARAGQ G+H RTE NK+VY I   G  + +  TEFD TEK I+PMGGFPHYG V+
Sbjct: 256 VMYSIARAGQMGFHRRTEKNKRVYMI---GNGSSNIKTEFDLTEKPISPMGGFPHYGEVR 312

Query: 243 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 64
            D++M+KG  VG +KRVVTLR+SLL+Q    A EE+ +KFVDTSSK GHGRFQT+ EK+ 
Sbjct: 313 NDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKA 369

Query: 63  FYGKLK 46
           FYG  K
Sbjct: 370 FYGARK 375

---

>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)|
          Length = 130

 Score =  169 bits (429), Expect = 5e-42
 Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 6/129 (4%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 415
           VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR ++
Sbjct: 2   VPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAF 61

Query: 414 TVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYG 253
           +VARAGQ GYHHRTE+NKK+YKIG     K G+   ++  T++D ++K I P+G F HYG
Sbjct: 62  SVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYG 121

Query: 252 VVKADYLMI 226
            V  D++M+
Sbjct: 122 EVTNDFVML 130

---

>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score =  149 bits (377), Expect = 5e-36
 Identities = 71/165 (43%), Positives = 106/165 (64%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           KE+ +  V ++ E++D+I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV
Sbjct: 205 KELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARV 264

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
            +TV  AGQ G+HHRTE+NK++  IG+ G+   D +TE      +ITP GGFPHYG+V++
Sbjct: 265 MWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI-----EITPKGGFPHYGIVRS 319

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 106
           D++MI G   G  KR++ +R ++     +  ++  ++ +V   SK
Sbjct: 320 DFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364

---

>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score =  147 bits (371), Expect = 2e-35
 Identities = 70/165 (42%), Positives = 103/165 (62%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           KE+ +  V ++ E++D+I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV
Sbjct: 203 KEIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARV 262

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
            +TV  AGQ G+HHRTE+NK++  IG+ G+         D  E +ITP GGFPHYG+V+ 
Sbjct: 263 MWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRG 316

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 106
           D++MI G   G  KR++ +R ++     +  ++  ++ +V   SK
Sbjct: 317 DFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361

---

>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score =  147 bits (370), Expect = 3e-35
 Identities = 70/165 (42%), Positives = 104/165 (63%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           KE+ +  V ++ E++D+I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV
Sbjct: 202 KELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARV 261

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
            +TV  AGQ G+HHRTE+NK++  IG+ G+         D  E +ITP GGFPHYG+V++
Sbjct: 262 MWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRS 315

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 106
           D++MI G   G  KR++ +R ++     +  ++  ++ +V   SK
Sbjct: 316 DFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360

---

>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score =  135 bits (341), Expect = 7e-32
 Identities = 70/167 (41%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPA 427
           KE+    V  + E++D+I VTKGKG +G V RWGV     K  R    R +  +G WHPA
Sbjct: 185 KELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPA 244

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
           RV +TV +AGQ G+HHRTE NK++  IG+ G+   D +      E +ITP GGFPHYG+V
Sbjct: 245 RVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKLVLDGN------EIEITPKGGFPHYGIV 298

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 106
           ++D+LMI+G   G  KR++ +R ++     +  +E  ++ +V   SK
Sbjct: 299 RSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345

---

>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score =  131 bits (330), Expect = 1e-30
 Identities = 71/169 (42%), Positives = 102/169 (60%), Gaps = 2/169 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPA 427
           K++ I  VFQ+ E++D IGVTKGKG++G V RWGV  +  +   +G+ R V  IG W P 
Sbjct: 182 KQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPK 241

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V ++V   GQ GYH RTE NK++ KIG  G E              ITP GGF HYGV+
Sbjct: 242 MVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVI 287

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           + +Y+++KG   GP KR++ LR+++  Q   + + EI   ++ T+SK G
Sbjct: 288 RNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334

---

>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score =  130 bits (326), Expect = 4e-30
 Identities = 67/169 (39%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPA 427
           KE+ +  VF +  +ID+I VTKGKG++G V RWGV  L  K  R    R+V  +G W+P 
Sbjct: 178 KEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPH 237

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V +TV +AGQ G+H RTE NK++ KIG+ G+E              ITP GGF HYGV+
Sbjct: 238 HVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVI 283

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           +  Y+++ G   GP KR++ +R ++  +  +   + + + +V T+SK G
Sbjct: 284 RTQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330

---

>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score =  127 bits (319), Expect = 3e-29
 Identities = 66/145 (45%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPA 427
           +E+    VF + E++D+  +TKGKG++GVV RWGVT   RKT R    R +  IG   P+
Sbjct: 188 EEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPS 247

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
           RV +TV  AGQ GYH RTE NK++ KIG+ G+E              +TP GGF +YGVV
Sbjct: 248 RVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE--------------VTPRGGFVNYGVV 293

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSL 172
           + DY+MI G   GPKKR++ +R ++
Sbjct: 294 RGDYIMIHGTVPGPKKRLIRVRPAV 318

---

>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score =  121 bits (304), Expect = 1e-27
 Identities = 68/170 (40%), Positives = 96/170 (56%), Gaps = 2/170 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPA 427
           K + I+ VF+  E ID + VTKGKG++G V RWGV  +  +   +G+ R+   IG W P 
Sbjct: 181 KTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPK 240

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
           RV +TV  AGQ G+H RTE NK++ K+G  G E              ITP GGF +YG V
Sbjct: 241 RVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAV 286

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGH 97
           K  Y+++KG   GP KR+V LR ++     +  L E+   ++   SK G+
Sbjct: 287 KNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TYISKESKQGN 334

---

>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score =  119 bits (299), Expect = 5e-27
 Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 3/170 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPA 427
           K+V    +F +   +D I VTKGKG++G V RWG+     K  R    R +  +G W P+
Sbjct: 182 KDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPS 241

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGGFPHYGV 250
           R  +TV +AGQ GYH RTE NK++ KIG             D +E D + P GGF  YG+
Sbjct: 242 RTMWTVPQAGQMGYHRRTEYNKQILKIG-------------DASEADLVNPDGGFVRYGL 288

Query: 249 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           V+ DY+MIKG   GP KR+V LR+++  + +    E  ++ ++ T+SK G
Sbjct: 289 VRNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336

---

>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score =  119 bits (298), Expect = 7e-27
 Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARV 421
           V +  VF+   ++D   +T GKG +G V RWG+  +  K  R   LR+V  +GA++P+RV
Sbjct: 187 VSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRV 246

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
           S+ V + GQ GYH RTE NK++ KIG  G+E              +TP GGF +YG+V+ 
Sbjct: 247 SWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRG 292

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           DY++IKG   GP KR++ LR  +  +  +  L E  + ++   SK G
Sbjct: 293 DYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337

---

>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score =  119 bits (298), Expect = 7e-27
 Identities = 67/142 (47%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPA 427
           K V    VF   +++D+I VTKGKGY+GV+ R+GVT LPR  K  +G R+   IG   PA
Sbjct: 187 KTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA 246

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
            V +T  R GQ G+H RTE NK++ KIG+ G E              ITP  GFPHYGVV
Sbjct: 247 -VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVV 291

Query: 246 KADYLMIKGCCVGPKKRVVTLR 181
           K  Y++I+G   G +KR+V LR
Sbjct: 292 KGPYILIQGSVPGARKRLVVLR 313

---

>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score =  115 bits (287), Expect = 1e-25
 Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 2/167 (1%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARV 421
           V +  VF+   ++D   +T GKG +G V RWG+     K  R   LR++  +G+++P+RV
Sbjct: 187 VNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRV 246

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
           S+ V + GQ GYH RTE NK++ KIG  G+E              +TP GGF +YG+V+ 
Sbjct: 247 SWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRG 292

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           DY++IKG   GP KR++ LR  +  +  +  L E  + ++   SK G
Sbjct: 293 DYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337

---

>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score =  107 bits (268), Expect = 2e-23
 Identities = 61/167 (36%), Positives = 89/167 (53%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           K +  +   +  + +D++ VTKGKG+ G V R+GV  LPRK  +  R +  +G WHP  V
Sbjct: 178 KTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWV 237

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
             TV +AGQ GY  RT  N +V K  K      DA T        I   GGF HYG+VK 
Sbjct: 238 RNTVPQAGQMGYQQRTISNVRVLKYSK----GEDADT--------INVRGGFLHYGLVKN 285

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           DY+++ G   GP KR++ +R    ++     ++ +KL ++   SK G
Sbjct: 286 DYVLLFGSVPGPAKRLIKMRDPARQKVP--DIDNVKLDYISLESKQG 330

---

>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score =  107 bits (266), Expect = 4e-23
 Identities = 60/171 (35%), Positives = 89/171 (52%)
 Frame = -1

Query: 612 NFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 433
           N   K++      +  + +D++ +TKGKG+ G V R+GV  LPRK  +  R +  +G WH
Sbjct: 174 NHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWH 233

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYG 253
           P  V  TV +AGQ G+  RT  N +V K G           E D     I   GGF HYG
Sbjct: 234 PDWVRNTVPQAGQMGFQQRTISNVRVIKYGN--------KEEVD----SINVRGGFLHYG 281

Query: 252 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
            VK DY+++ G   G  KR++ +R    ++     +EE+KL+++   SK G
Sbjct: 282 FVKNDYVLLFGSIPGASKRLIKMRDPARQKVP--DIEEVKLEYISLESKQG 330

---

>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score =  106 bits (265), Expect = 5e-23
 Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
 Frame = -1

Query: 612 NFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGA 439
           N   K + +  VF++ ++IDIIGVTKGKG++GVV R+GV  LPR  K  +G RKV   G 
Sbjct: 189 NILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGP 248

Query: 438 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPH 259
              +  SY V + GQ GYH RTE NK++ KI                   +I P GGF +
Sbjct: 249 SF-STPSY-VPQPGQMGYHRRTEYNKRILKISD--------------DPNEINPKGGFVN 292

Query: 258 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           YG+V+  YL+I+G  +G KKR + LR  +  + S +     K+ +V+  S+ G
Sbjct: 293 YGIVRNTYLIIEGSIIGAKKRPLFLRYPI--RPSWIPQSAPKITYVNLYSQQG 343

---

>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score =  106 bits (264), Expect = 6e-23
 Identities = 57/156 (36%), Positives = 89/156 (57%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           KE+ I+ VF++ + +D+I VTKGKG++GV+ R+ V R   K+ +G+RKV  IG+  P R+
Sbjct: 175 KELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRI 234

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
             TV   GQ GYH RTE NK + KIG                 + +   GG+  YG V  
Sbjct: 235 FPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIG 277

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 133
             +++KG   GP+KR++ LR+++     +  +E I+
Sbjct: 278 PTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313

---

>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score =  104 bits (260), Expect = 2e-22
 Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
 Frame = -1

Query: 612 NFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGA 439
           N   KE+ I  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G 
Sbjct: 197 NILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP 256

Query: 438 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPH 259
                 SYT  + GQ G+H RTE NK++ KIG                 K+I P GGF  
Sbjct: 257 -SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------EPKEINPAGGFVR 300

Query: 258 YGVVKADYLMIKGCCVGPKKRVVTLRQ 178
           YG+V+  Y++++G  +G KKR + LR+
Sbjct: 301 YGIVRNTYVLLEGSILGSKKRPIFLRE 327

---

>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score =  104 bits (259), Expect = 2e-22
 Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVA 406
           VF+  E  D  G+TKGKG +G V RWGV +   K  R    R++  +G W+P+RV  TV 
Sbjct: 190 VFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVP 249

Query: 405 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 226
           + GQ GYH RTE+NK++  I   G E               TP GGFP+YG V   Y ++
Sbjct: 250 QQGQTGYHQRTELNKRLIDIND-GDEP--------------TPDGGFPNYGEVDGPYTLV 294

Query: 225 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
           KG   GP++R+V  R ++    S     E+  ++V T+S  G
Sbjct: 295 KGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQG 334

---

>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score =  102 bits (254), Expect = 9e-22
 Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPAR 424
           E  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W+P+R
Sbjct: 187 EHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSR 246

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 244
           V  TV + GQ GYH RTE+NK++  IG+  + T D               GGF +YG V 
Sbjct: 247 VRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD---------------GGFVNYGEVD 291

Query: 243 ADYLMIKGCCVGPKKRVVTLRQSL 172
             Y ++KG   GP KR+V  R ++
Sbjct: 292 GPYTLVKGSVPGPDKRLVRFRPAV 315

---

>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score =  101 bits (251), Expect = 2e-21
 Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARV 421
           + ++ VF++ +++D+I VTKGKG++GV+ RWGV  LPR  K  +G R++      H    
Sbjct: 191 IAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARS--HGRST 248

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 241
            +   +AGQ G+H RTE NK++  I   G +              +TP GGF  YGVV++
Sbjct: 249 FWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRS 294

Query: 240 DYLMIKGCCVGPKKRVVTLRQSLL--KQTSRLALEEIKLKFVDTSSKFG 100
            ++M+ G   G  KR + +R ++   +   +L + + ++ ++  +SK G
Sbjct: 295 TFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343

---

>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score =  101 bits (251), Expect = 2e-21
 Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
 Frame = -1

Query: 618 GYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACI 445
           G +   K++P+  VF++ ++ DIIGVTKGKG++GV+ R+ V   PR  K  +G RK+   
Sbjct: 186 GLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGAR 245

Query: 444 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 265
           G    +  SY V + GQ G+H RTE NK++ KIG                  +I P GG 
Sbjct: 246 GP-SISTPSY-VPQPGQLGFHRRTEYNKRIIKIGD--------------NVNEINPAGGI 289

Query: 264 PHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 100
            +YG+VK  YL+I+G  +G +KR + LR  +    S  +    K+ +V+ +S+ G
Sbjct: 290 VNYGLVKNTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP--KITYVNLASQQG 342

---

>RL3_CLOTE (Q890N9) 50S ribosomal protein L3|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 433
           +E+ +D +F+  E ID+ G +KGKGY+G++ RW   R P     K HR +  +    A +
Sbjct: 95  QEIKVD-IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASY 151

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYG 253
           PAR       AG  G    T +N +V K                                
Sbjct: 152 PARTFKNKRMAGHMGNVKSTVLNLEVVKT------------------------------- 180

Query: 252 VVKADYLMIKGCCVGPKKRVVTLRQSL 172
           + + + ++IKG   GP K  V +R S+
Sbjct: 181 IPEKNLILIKGGIPGPNKGYVIIRNSI 207

---

>RL3_ENTFA (Q839G4) 50S ribosomal protein L3|
          Length = 209

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 424
           KE+ +D VFQ  +++D+ G TKGKG++G + R G +R P     R  R+   +G   P R
Sbjct: 95  KEIKVD-VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 244
           V      AG+ G    T  N +V K+                                V+
Sbjct: 154 VFKNKRLAGRMGGDRVTIQNLEVVKVD-------------------------------VE 182

Query: 243 ADYLMIKGCCVGPKKRVVTLRQSL 172
            + ++IKG   G KK ++T++ ++
Sbjct: 183 RNVILIKGNIPGAKKSLITIKSAV 206

---

>RL3_CLOAB (Q97EH8) 50S ribosomal protein L3|
          Length = 209

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 412
           +F   E +D+ GV+KGKG++G + RWG  R P     K HR +  +   G+  P+R   +
Sbjct: 101 IFAAGEKVDVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKS 158

Query: 411 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 232
               G  G+ + T +N +V K+                               + + + +
Sbjct: 159 KKMPGHMGHVNTTVLNVEVAKV-------------------------------IPEKNLI 187

Query: 231 MIKGCCVGPKKRVVTLRQSL 172
           +IKG   GP K  V ++ S+
Sbjct: 188 LIKGGVPGPNKSFVVIKNSV 207

---

>RL3_BACST (P28600) 50S ribosomal protein L3|
          Length = 213

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPAR 424
           +EV +D +F + +++D+ G++KGKG++G + R G +R P     R  R+   +GA  P R
Sbjct: 95  QEVKVD-IFSEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNR 153

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
           V  T    G+ G    T  N K+ K+
Sbjct: 154 VFKTKNLPGRMGGERVTIQNLKIVKV 179

---

>RL3_PORGI (Q7MTL3) 50S ribosomal protein L3|
          Length = 205

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTV 409
           F   + +D++G +KGKG++GVV R G   + + T   H  LR    +GA  +PA+V    
Sbjct: 100 FSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGT 159

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AGQ G    T  N +V K+
Sbjct: 160 RMAGQMGNERVTVQNLEVIKV 180

---

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 430
           E+ +D  F+  + +D+ GV+KGKG++G + RW  +R P     K HR    +    A  P
Sbjct: 96  EIKVDT-FEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDP 152

Query: 429 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 250
           +R        G  G  + T +N +V KI                 EK+I           
Sbjct: 153 SRTFKNKRMPGHMGAKNTTVLNLEVVKI---------------MPEKNI----------- 186

Query: 249 VKADYLMIKGCCVGPKKRVVTLRQSL 172
                ++IKG   GP K  V +R S+
Sbjct: 187 -----ILIKGGIPGPNKGTVVIRNSV 207

---

>RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor|
          Length = 302

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 433
           +++  + +F+  +++D+ G + GKG++G + RWG+ R P     K+HR    + C     
Sbjct: 183 QQLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT-- 240

Query: 432 PARVSYTVARAGQNGYHHRT 373
           P+RV   +  AG+ G   +T
Sbjct: 241 PSRVYKGLKMAGRMGNERKT 260

---

>RL3_BACTN (Q8A476) 50S ribosomal protein L3|
          Length = 205

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYT 412
           +F     +D++G +KGKG++GVV R G   + + T   H   RK   IGA  +PA+V   
Sbjct: 99  MFNDATFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
           +   GQ G    T  N +V K+
Sbjct: 159 MRMGGQLGGDRVTVQNLQVLKV 180

---

>RL3_BACCR (Q81J42) 50S ribosomal protein L3|
          Length = 210

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 424
           +EV +D VF   E++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
           V      AG+ G    T  N ++ ++
Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179

---

>RL3_BACAN (Q81VT0) 50S ribosomal protein L3|
          Length = 210

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 424
           +EV +D VF   E++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
           V      AG+ G    T  N ++ ++
Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179

---

>RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3|
          Length = 244

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 442
           +E+ +  VF+  +++D+ G++KG+G+ GV+ RW     PR   HR  R V  IG
Sbjct: 96  QELRVQDVFKPGDLVDVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149

---

>RL3_BIFLO (Q8G417) 50S ribosomal protein L3|
          Length = 213

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 409
           +F++   +D+ G TKGKG+ G + RWG    R    +H+  R+   +GA   P+R+    
Sbjct: 103 LFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGK 162

Query: 408 ARAGQNGYHHRTEMNKKV 355
             AG+ G+   T  N  V
Sbjct: 163 RMAGRMGHVTATTQNLTV 180

---

>RL3_LISMO (Q8Y440) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 421
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKI 346
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_LISMF (Q71WE6) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 421
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKI 346
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_LISIN (Q927K7) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 421
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKI 346
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3|
          Length = 209

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR---WGVTRLPRKTHRGLRKVACIGAWHPAR 424
           VP+D VF++ + ++++GVTKGKG+ GVV R    G +R   ++ R     +  G+  P+R
Sbjct: 97  VPVD-VFKEGDKVNVLGVTKGKGFAGVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSR 155

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
                  AG+ G  ++T  N  + K+
Sbjct: 156 TFKGTRMAGRMGGKNKTVQNLVIVKV 181

---

>RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)|
          Length = 209

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 424
           +EV ++ +F   E++D+ GV+KGKG++G + R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNR 153

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
           V       G+ G    T  N ++ K+
Sbjct: 154 VFKGKLLPGRMGGEQITVQNLEIVKV 179

---

>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3|
          Length = 266

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 41/154 (26%), Positives = 66/154 (42%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVAR 403
           ++F   E +D+ G++KGKG+ G + R    ++  K+H G       G   P R       
Sbjct: 97  SIFTPGEFVDVTGISKGKGFAGTIKRHN-QKIGPKSHGG------GGGSKPVR------- 142

Query: 402 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 223
             Q G       NK V  +   G   H+  T     E  +T          VK + L++K
Sbjct: 143 --QTGSLGDISGNKVVKGMTMPGHLGHEQVT-IQNLEVIMTD---------VKNNILLVK 190

Query: 222 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 121
           G   GPKK  V +++   K  S+ A++ + L+ V
Sbjct: 191 GAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224

---

>RL3_STRP6 (Q5XED5) 50S ribosomal protein L3|
          Length = 208

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 399 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 220
           G+ G +  T  N ++ ++                               +++ + +++KG
Sbjct: 160 GRMGGNRVTVQNLEIVQV-------------------------------ILEKNVILVKG 188

Query: 219 CCVGPKKRVVTLRQSL 172
              G KK ++T++ ++
Sbjct: 189 NVPGAKKSLITIKSAV 204

---

>RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3|
          Length = 208

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F+  +++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 399 GQNGYHHRTEMNKKVYKI 346
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3|
          Length = 209

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = -1

Query: 612 NFFE--KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 445
           N FE  +E+ +D +F+  E ID+ G +KGKG++GV+ R G  R P  TH     R    +
Sbjct: 89  NSFEVGQEIKVD-IFESGEKIDVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAM 146

Query: 444 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           G   P RV       G  G    T  N +V  +
Sbjct: 147 GVIDPMRVFKGKKLPGHMGSEQVTIQNLEVVSV 179

---

>RL3_TROWT (Q83FY6) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 409
           +FQ+ +++D++G +KGKG+ G + R           +HR  RK   +GA   P+RV    
Sbjct: 96  IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG+ G    T  N ++ KI
Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176

---

>RL3_TROW8 (Q83I78) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 409
           +FQ+ +++D++G +KGKG+ G + R           +HR  RK   +GA   P+RV    
Sbjct: 96  IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG+ G    T  N ++ KI
Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176

---

>RL3_THETN (Q8R7V4) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WH 433
           E+ +D +F+  + +D+ G++KGKG+ GV+ R+G  R P     K H   R+V  +GA   
Sbjct: 96  EIKVD-IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTD 151

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           P R        G+ G    T  N +V K+
Sbjct: 152 PGRTFKGKKMPGRMGSDRVTIQNLEVVKV 180

---

>RL3_SPIKU (P60457) 50S ribosomal protein L3|
          Length = 258

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPARVSYTVAR 403
           +F   E +D+ G +KGKG+ G + R   +R P     G  R V  +GA  P R+  +   
Sbjct: 98  IFTAGEFVDVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKM 157

Query: 402 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 223
            G  G    T  N ++  I                TEK+                 L++K
Sbjct: 158 PGHIGTEKVTIQNLEIIAID---------------TEKNA----------------LLVK 186

Query: 222 GCCVGPKKRVVTLRQSL 172
           G   GPKK+ V +++++
Sbjct: 187 GSIPGPKKQFVVIKEAI 203

---

>RL3_THEMA (P38515) 50S ribosomal protein L3|
          Length = 207

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPARVSYT 412
           VF+K E +D+ G TKG+G+ G + RWG +  P+    K HR L  V       PA++   
Sbjct: 97  VFEKGEYVDVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKG 154

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
               G+ G    T  N +V  I
Sbjct: 155 KKMPGRYGNERVTVRNLQVVDI 176

---

>RL3_STRP8 (P60452) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 399 GQNGYHHRTEMNKKVYKI 346
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRP3 (P60451) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 399 GQNGYHHRTEMNKKVYKI 346
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 399 GQNGYHHRTEMNKKVYKI 346
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 399 GQNGYHHRTEMNKKVYKI 346
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_AQUAE (O66431) 50S ribosomal protein L3|
          Length = 241

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 2/162 (1%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG-AWHPA 427
           +++ ++ VF+  +++D+ G++KG+G+ G + RW     P+   HR  R V  IG    P 
Sbjct: 96  QQLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIGQRTDPG 155

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
           RV       G  G                                K +   G F    + 
Sbjct: 156 RVWKGKRMPGHYG-------------------------------AKPVRVQGLFVVDVLP 184

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 121
           + + +++KG   G  K +V + QS +       L++ + +F+
Sbjct: 185 EENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFI 226

---

>RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 418
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVW 252

Query: 417 YTVARAGQNGYHHRTEMNKKVYKI 346
                 GQ G   RT    KV++I
Sbjct: 253 PGTKMPGQLGNVDRTAFGLKVWRI 276

---

>RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 418
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   +      RV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVW 252

Query: 417 YTVARAGQNGYHHRTEMNKKVYKI 346
                 G+ G  +RTE   KV++I
Sbjct: 253 PGTKMPGKMGNIYRTEYGLKVWRI 276

---

>RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3|
          Length = 209

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 424
           +E+ +DA F + +++D+ G +KGKG+ G + R    R P     R  R+   +G   P R
Sbjct: 95  QEIKVDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNR 153

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 244
           V    A  G+ G    T  N ++ K+                                 +
Sbjct: 154 VFKGKALPGRMGGEQVTVQNLEIIKVD-------------------------------AE 182

Query: 243 ADYLMIKGCCVGPKKRVVTLRQSL 172
            + L++KG   G KK  VT+R ++
Sbjct: 183 RNLLLVKGNVPGAKKSYVTVRSAI 206

---

>RL3_STRMU (Q8DS16) 50S ribosomal protein L3|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F+  +++D+ G TKGKG++G + R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 399 GQNGYHHRTEMNKKVYKI 346
           G+ G +  T  N +V ++
Sbjct: 160 GRMGGNRVTVQNLEVVQV 177

---

>RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 347

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 418
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252

Query: 417 YTVARAGQNGYHHRTEMNKKVYKI 346
                 G+ G  +RT    KV+++
Sbjct: 253 PGTKMPGKMGNQNRTVYGLKVWRV 276

---

>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 418
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252

Query: 417 YTVARAGQNGYHHRTEMNKKVYKI 346
                 G+ G  +RT    KV+++
Sbjct: 253 PGTKMPGRMGNQNRTVYGLKVWRV 276

---

>RL3_STAAW (P60450) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAS (Q6G771) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAR (Q6GEI3) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAN (P60449) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAM (P60448) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAC (Q5HDV8) 50S ribosomal protein L3|
          Length = 209

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 92  QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 129

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 130 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 173

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 174 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 206

---

>RL3_CORDI (P60453) 50S ribosomal protein L3|
          Length = 218

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 409
           +F+    +D+ G TKGKGY G + R G              R+V  IGA   P RV    
Sbjct: 105 IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGT 164

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGSDRVTTQNLKVQKI 185

---

>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3|
          Length = 206

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = -1

Query: 588 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 415
           I  VF   +++ + GV+KG+GY+GVV R G    P     R  R    +GA   P+RV  
Sbjct: 98  IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157

Query: 414 TVARAGQNGYHHRTEMNKKVYKIGK 340
            V   G+ G    T  N KV +I +
Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182

---

>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3|
          Length = 206

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = -1

Query: 588 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 415
           I  VF   +++ + GV+KG+GY+GVV R G    P     R  R    +GA   P+RV  
Sbjct: 98  IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157

Query: 414 TVARAGQNGYHHRTEMNKKVYKIGK 340
            V   G+ G    T  N KV +I +
Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182

---

>RL3_MYCCT (P10134) 50S ribosomal protein L3|
          Length = 223

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 4/155 (2%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPA 427
           + +  +F   E +D+ G++KGKG+ G + R   +R P       HRG+  +  I      
Sbjct: 94  INVSDIFVSGEYVDVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----IN 149

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 247
           R+  +    G  G   RT  N ++  I +                               
Sbjct: 150 RIFKSKKMPGHMGNAKRTIQNLEIIAIDQ------------------------------- 178

Query: 246 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 142
             + ++IKG   GPK   V ++Q++   +S+ A+E
Sbjct: 179 SNNIMLIKGSIPGPKNSFVQIKQNVKGMSSKQAVE 213

---

>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3|
          Length = 208

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F   +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 399 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 220
           G+ G    T  N +V ++                               V + + ++IKG
Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188

Query: 219 CCVGPKKRVVTLRQSL 172
              G KK ++T++ ++
Sbjct: 189 NVPGAKKSLITIKSAV 204

---

>RL3_STRPN (Q97SV5) 50S ribosomal protein L3|
          Length = 208

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 400
           F   +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 399 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 220
           G+ G    T  N +V ++                               V + + ++IKG
Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188

Query: 219 CCVGPKKRVVTLRQSL 172
              G KK ++T++ ++
Sbjct: 189 NVPGAKKSLITIKSAV 204

---

>RL3_THETH (P52860) 50S ribosomal protein L3|
          Length = 206

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 409
           +F+  E +D+ G +KG+G+ GV+ RW     P     H+  R    IG    P RV    
Sbjct: 95  IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG  G    T MN +V  +
Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175

---

>RL3_THET8 (Q5SHN8) 50S ribosomal protein L3|
          Length = 206

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 409
           +F+  E +D+ G +KG+G+ GV+ RW     P     H+  R    IG    P RV    
Sbjct: 95  IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG  G    T MN +V  +
Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175

---

>RL3_GEOSL (P60454) 50S ribosomal protein L3|
          Length = 210

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG-AWHPARVSYTVA 406
           F+  E ID+ G + GKG++GV+ RWG  R  R +H     R    IG + +P+RV     
Sbjct: 102 FEVGEYIDVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKK 160

Query: 405 RAGQNGYHHRTEMNKKVYKI 346
             GQ G    T    +V ++
Sbjct: 161 MPGQLGNERVTVQRLQVVRV 180

---

>RL3_STAES (Q8CRG0) 50S ribosomal protein L3|
          Length = 220

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F+  ++ID+ GV+KGKG++G + R G  R P                     
Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MAHGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +  S+ K
Sbjct: 185 VVQVDTENSVILVKGNVPGPKKGLVEITTSIKK 217

---

>RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3|
          Length = 220

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F+  ++ID+ GV+KGKG++G + R G  R P                     
Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MAHGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK +V +  S+ K
Sbjct: 185 VVQVDTENSVILVKGNVPGPKKGLVEITTSIKK 217

---

>RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast precursor|
          Length = 324

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPARVSYT 412
           F   + +D+ G+T+GKG++G + R G + +P       +HR         A  P +V   
Sbjct: 176 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKG 233

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AG+ G   RT  N  VYKI
Sbjct: 234 RKMAGRMGADQRTVKNVWVYKI 255

---

>RL3_CORGL (Q8NT09) 50S ribosomal protein L3|
          Length = 218

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F   + +D+ G TKGKGY G + R G              R+V  IG A  P R+    
Sbjct: 105 IFNDIKFVDVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185

---

>RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3|
          Length = 211

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHP 430
           +F + E ID  G +KGKG +GV+ RW     P     +K HR     G RK        P
Sbjct: 95  IFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------P 147

Query: 429 ARVSYTVARAGQNGYHHRTEMNKKVYKI 346
            RV      AG  G    T  N +V +I
Sbjct: 148 GRVYKGKRMAGHMGMERVTVQNLEVVEI 175

---

>RL3_NEIMB (P60444) 50S ribosomal protein L3|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 412
           ++F+  +++D+ G +KGKG+ G + R  +G  R      R  R    IG A  P RV   
Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T    +V ++
Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183

---

>RL3_NEIMA (P60443) 50S ribosomal protein L3|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 412
           ++F+  +++D+ G +KGKG+ G + R  +G  R      R  R    IG A  P RV   
Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T    +V ++
Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183

---

>RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3|
          Length = 220

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 8/153 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 421
           +EV +D  F+  ++ID+ G +KGKG++G + R G  R P                     
Sbjct: 103 QEVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGP--------------------- 140

Query: 420 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 253
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MAHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 252 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 166
           VV+ D     +++KG   GPKK  V ++ S+ K
Sbjct: 185 VVQVDTENNVILVKGNVPGPKKGFVEIQTSIKK 217

---

>RL3_COREF (Q8FS80) 50S ribosomal protein L3|
          Length = 218

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F   + +D+ G +KGKGY G + R G              R+V  IG A  P R+    
Sbjct: 105 IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185

---

>RL3_VIBPA (Q87T13) 50S ribosomal protein L3|
          Length = 209

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 412
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNETKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
 Frame = +1

Query: 7   DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFLQCETRGLLQ 171
           +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF Q    G + 
Sbjct: 186 EQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFAQVRGNGTVT 242

Query: 172 QGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 318
           + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 243 EKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

---

>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
 Frame = +1

Query: 7   DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFLQCETRGLLQ 171
           +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF Q    G + 
Sbjct: 186 EQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFAQVRGNGTVT 242

Query: 172 QGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 318
           + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 243 EKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

---

>RL3_BUCBP (Q89A68) 50S ribosomal protein L3|
          Length = 214

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 409
           +F   + +DIIG +KGKG+ G V RW            L  R    IG    P RV    
Sbjct: 102 LFSNIKKVDIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGK 161

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG  G H  T  N  + KI
Sbjct: 162 KMAGHLGNHRVTVQNLDIVKI 182

---

>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
 Frame = +1

Query: 7   DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFLQCETRGLLQ 171
           +++T+++LR+S  L+  I+ L   G  E A      P++   + K   DF Q    G + 
Sbjct: 186 EQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFAQVRGNGTVT 242

Query: 172 QGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 318
           + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 243 EKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

---

>RL3_BORPE (Q7VTD3) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 424
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_BORPA (Q7W2F6) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 424
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_BORBR (Q7WRC5) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -1

Query: 594 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 424
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKI 346
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3|
          Length = 310

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 1/164 (0%)
 Frame = -1

Query: 618 GYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 439
           GYN  +K + +D +F   + +D   +TKGKG+ G + RW              KV  +G 
Sbjct: 87  GYNVGDK-ILVD-IFNSGDKVDAQAITKGKGFTGAIKRWNF------------KVGPLG- 131

Query: 438 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPH 259
            H A            GY HR + +    + G  GQ              ++  +     
Sbjct: 132 -HGA------------GYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTV 178

Query: 258 YGV-VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 130
             + ++ + +++KG   GP   +V L+ ++    S+  ++ IKL
Sbjct: 179 VSIELEKNLILVKGSVPGPVNSLVLLKTTV---KSKKQVDPIKL 219

---

>RL3_CHLCV (Q824Q1) 50S ribosomal protein L3|
          Length = 221

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 406
           V +    +DI GV+KGKG++GV+ R+G    P+    G  R    IG    P R      
Sbjct: 111 VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 405 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 226
           R    G  + T  N +V KI                 EK +                L++
Sbjct: 171 RPSHMGTVNVTVKNLEVVKID---------------LEKKV----------------LLV 199

Query: 225 KGCCVGPKKRVVTLRQS 175
           KG   GP+  VV +R+S
Sbjct: 200 KGAIPGPRGSVVVIRRS 216

---

>RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3|
          Length = 403

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = -1

Query: 591 PIDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVS 418
           P+DA  F   + +   G T   G++G + RWG+   P R+T +  R++  +G+   AR+ 
Sbjct: 212 PLDARHFGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIW 271

Query: 417 YTVARAGQNGYHHRTEMNKKVYKI 346
                 G  GY  RT    ++ +I
Sbjct: 272 PGKRMPGHMGYEWRTVSGLEIVRI 295

---

>RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 412
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_VIBVU (Q8DE39) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 412
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 412
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_BUCAP (Q8K950) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F   + +D+ G++KGKG+ G V RW   R    TH      R    IG    P RV   
Sbjct: 100 IFNDIKKVDVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGRVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AG  G +  T  N  + KI
Sbjct: 159 KKMAGHLGNNRVTVQNLNIVKI 180

---

>RL3_MYCGA (O52332) 50S ribosomal protein L3|
          Length = 236

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = -1

Query: 588 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 409
           ++ +FQ+ +++D+   TKG+G+ G + RW   ++  K H         GA +P R   +V
Sbjct: 96  VEELFQEGQVVDVQARTKGRGFTGAIKRWNF-KIGSKGH---------GAGYPHRFQGSV 145

Query: 408 ARAGQNGYHHRTEMNKK 358
            +AG+ G   +  M  K
Sbjct: 146 -QAGRGGSQAQRVMKGK 161

---

>RL3_TREPA (O83219) 50S ribosomal protein L3|
          Length = 208

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPARVSYTV 409
           V +    +D+  ++KGKG++GVV RWG +   R +H  +  R+    G    P R    V
Sbjct: 98  VLESVRYLDVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNV 156

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
              G+ G    T  N ++ +I
Sbjct: 157 KMPGRMGAERVTVQNLRIERI 177

---

>RL3_BORBU (P94267) 50S ribosomal protein L3|
          Length = 206

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 430
           E+ +D VF+  + +D+ G TKGKG++G + R   +  P     K HR L       A  P
Sbjct: 94  EIKVD-VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTP 150

Query: 429 ARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           AR       AG+   + +T  N +V  I
Sbjct: 151 ARTFKGTKMAGRMAGNQQTIQNLEVVLI 178

---

>RL3_MYCTU (P60442) 50S ribosomal protein L3|
          Length = 217

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 415
           +F     +D+ G +KGKG+ G + R      G +   +  HR  R  +  G   PARV  
Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162

Query: 414 TVARAGQNGYHHRTEMNKKVYKI 346
               AG+ G    T +N  V+K+
Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185

---

>RL3_MYCBO (P60441) 50S ribosomal protein L3|
          Length = 217

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 415
           +F     +D+ G +KGKG+ G + R      G +   +  HR  R  +  G   PARV  
Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162

Query: 414 TVARAGQNGYHHRTEMNKKVYKI 346
               AG+ G    T +N  V+K+
Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185

---

>RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3|
          Length = 211

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 502
           ++ +D +FQ  +M+D+ G +KGKG+ G + RW
Sbjct: 95  QITVD-LFQAGQMVDVTGESKGKGFAGTIKRW 125

---

>RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3|
          Length = 211

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG--AWH 433
           +E+ +D V  +   +DI G +KGKG  GV+ + G +  R      R  R    IG  +W 
Sbjct: 93  QEIKVD-VLTEVGYVDITGTSKGKGTSGVMKKHGFSGNRASHGVSRNHRLGGSIGMSSW- 150

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           P +V      AGQ+G    T  N KV K+
Sbjct: 151 PGKVLKGKKMAGQHGNATVTVQNLKVVKV 179

---

>RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast precursor|
          Length = 271

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW----GVTRLPRKTHRGLRKVACIGAWH 433
           +++  D +F++ +++D+ G T GKG++G + R     G      K+HR L  +       
Sbjct: 149 QKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIG--AGTT 206

Query: 432 PARVSYTVARAGQNGYHHRTEMNK-KVYKIGK 340
           P RV       G+ G   RT++ K K+ K+ K
Sbjct: 207 PGRVYKGKKMPGRMG-GTRTKIRKLKIVKVDK 237

---

>RL3_LACPL (Q88XY6) 50S ribosomal protein L3|
          Length = 209

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 421
           EV  D +F   + +D+ G+TKG GY+G + + G +R P     R  R+   +GA    RV
Sbjct: 97  EVKAD-IFAAGDAVDVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRV 154

Query: 420 SYTVARAGQNGYHHRTEMNKKVYK 349
                  G+ G H RT  N ++ +
Sbjct: 155 FKGKKLPGRMGNHQRTMQNLQIVR 178

---

>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)|
          Length = 269

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPARVSYTV 409
           F++ + +D+  V+KGKG+ GV+ R+G   L R +H         G++     P RV    
Sbjct: 160 FKEGQYVDVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGR 218

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
              G  G  H T  N KV K+
Sbjct: 219 KMPGHMGNEHVTIQNVKVLKV 239

---

>RL3_XANCP (Q8PC49) 50S ribosomal protein L3|
          Length = 216

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 412
           +F+  + +D+ GVTKGKG++G + R+   R+   TH         G+      P RV   
Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              +G  G   ++  N +V K+
Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187

---

>RL3_XANAC (Q8PNS4) 50S ribosomal protein L3|
          Length = 216

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 412
           +F+  + +D+ GVTKGKG++G + R+   R+   TH         G+      P RV   
Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              +G  G   ++  N +V K+
Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187

---

>RL3_COXBU (Q83ES4) 50S ribosomal protein L3|
          Length = 217

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 430
           E+ +D +F++ +++D+ G+T+GKG+ G V R    R    TH      R    IG    P
Sbjct: 98  ELKVD-IFKEGQVVDVRGLTRGKGFAGTVKRHNF-RTQDATHGNSLSHRAPGSIGQCQTP 155

Query: 429 ARVSYTVARAGQNGYHHRTEMNKKVYKI 346
            RV      AGQ G  + T  ++++ K+
Sbjct: 156 GRVWKGKKMAGQLGNVYCTVQSQEIIKV 183

---

>RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)|
          Length = 121

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 433
           +E+ +D +F   + +D+ G +KGKG++G V RW   R    TH        +G+      
Sbjct: 6   QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 63

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           P RV      AG  G    T  + +V ++
Sbjct: 64  PGRVFKGKKMAGHLGNERVTVQSLEVVRV 92

---

>RL3_BRAPL (Q9FA04) 50S ribosomal protein L3|
          Length = 218

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA-CIGA-WHPA 427
           +E+ +D +FQ  + ID+  ++KG+G+ GV+ R      P       R+ A  IG   +PA
Sbjct: 94  QELKVD-IFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPA 152

Query: 426 RVSYTVARAGQNGYHHRTEMNKKVYKI 346
           RV       G  G    T  N KV +I
Sbjct: 153 RVWKGKGMPGHMGNTLTTIQNLKVVEI 179

---

>RL3_MYCLE (P30762) 50S ribosomal protein L3|
          Length = 217

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 415
           +F     +D+ G +KGKG+ G + R      G +   +  HR  R  +  G   PARV  
Sbjct: 105 IFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162

Query: 414 TVARAGQNGYHHRTEMNKKVYKI 346
               AG+ G    T  N  V+K+
Sbjct: 163 GTRMAGRMGNDRVTVQNLLVHKV 185

---

>RL3_HAEIN (P44344) 50S ribosomal protein L3|
          Length = 208

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 433
           +E+ +D +F   + +D+ G +KGKG++G V RW   R    TH        +G+      
Sbjct: 93  QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           P RV      AG  G    T  + +V ++
Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

---

>RL3_BUCAI (P57591) 50S ribosomal protein L3|
          Length = 209

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRW 502
           +F   + +DI G++KGKG+ G V RW
Sbjct: 100 IFNNVKKVDITGISKGKGFSGTVKRW 125

---

>RL3_PSESM (Q889X1) 50S ribosomal protein L3|
          Length = 211

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRW 502
           +F   +++D+ G +KGKG++G + RW
Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125

---

>RL3_LACLA (Q9CDW2) 50S ribosomal protein L3|
          Length = 207

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = -1

Query: 597 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 484
           E+ +D  F   +++D+ G +KGKG++G + R G +R P
Sbjct: 94  EITVDT-FAAGDVVDVTGTSKGKGFQGPIKRHGQSRGP 130

---

>RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 484
           +EV ++  F+  ++ID+ GV+KGKG++G + R    R P
Sbjct: 103 QEVSVNT-FEAGDVIDVTGVSKGKGFQGAIKRHNQARGP 140

---

>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 406
           VF+    +D+ G++KGKG++GV+ ++G    P     G  R    IG    P R      
Sbjct: 111 VFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 405 RAGQNGYHHRTEMNKKVYKI 346
           R    G  + T  N +V K+
Sbjct: 171 RPSHMGAENVTVKNLEVIKV 190

---

>RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = -1

Query: 558 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 388
           +D+ G++KGKG+ G V RW            L  R    IG    P +V      AG  G
Sbjct: 108 VDVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLG 167

Query: 387 YHHRTEMNKKVYKI 346
           Y   T  N  V  I
Sbjct: 168 YEKATIQNLAVINI 181

---

>RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3|
          Length = 221

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 406
           +F     +D+ G++KGKG++GV+ ++G    P+    G  R    IG    P R      
Sbjct: 111 IFDGVSNVDVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 405 RAGQNGYHHRTEMNKKVYKI 346
           R    G    T  N +V K+
Sbjct: 171 RPSHMGCDRVTVKNLEVVKV 190

---

>RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3|
          Length = 208

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 433
           +E+ +D +F   + +D+ G +KGKG+ G V RW   R    TH        +G+      
Sbjct: 93  QEINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           P RV      AG  G    T  + +V ++
Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

---

>RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precursor (Fragment)|
          Length = 259

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIGA-WHPARVSYTV 409
           +F++ +++D+ G T GKG++G + R    R  + TH  +  R++  IGA   P RV    
Sbjct: 144 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKR-GQMTHGSKSHRQLGSIGAGTTPGRVYKGK 202

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
              G+ G   R     K+ KI
Sbjct: 203 KMPGRMGGTKRKIRKLKIVKI 223

---

>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3|
          Length = 192

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -1

Query: 540 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPARVSYTVARAGQNGYHHRTE 370
           TKG+G+ GV+ RW     P    HR  R+   IG   W P RV      AGQ G    T 
Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158

Query: 369 MNKKV 355
            N+ V
Sbjct: 159 QNEIV 163

---

>RL3_PASMU (Q9CL32) 50S ribosomal protein L3|
          Length = 209

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 433
           +E+ +D +F   + +D+ G +KGKG+ G V RW   R    TH        +G+      
Sbjct: 94  QEINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 151

Query: 432 PARVSYTVARAGQNGYHHRTEMNKKVYKI 346
           P RV      AG  G    T  + +V ++
Sbjct: 152 PGRVFKGKKMAGHLGNERVTVQSLEVVRV 180

---

>RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3|
          Length = 214

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F   +++D+ G +KGKG+ GV+ R  +   R      R       IG A  P RV    
Sbjct: 103 IFTVGQLVDVTGTSKGKGFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGK 162

Query: 408 ARAGQNG 388
             AGQ G
Sbjct: 163 RMAGQYG 169

---

>RL3_CHLTR (O84533) 50S ribosomal protein L3|
          Length = 221

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 451
           +F     +DI G++KGKG++GV+ ++G    P+    G  + A
Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHA 153

---

>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 391 ILTSPSNSVG--HPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTDD 552
           + +SPS S+     S+  G+     +KT +GL    G TP  +N F    ++L  GY+ D
Sbjct: 68  VTSSPSRSMSATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGD 127

---

>RL3_MYCGE (P47397) 50S ribosomal protein L3|
          Length = 257

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 502
           K++    +F+  E +D+  +TKG+G+ G + RW
Sbjct: 94  KKITPQELFKIGEYVDVTSLTKGRGFTGAIKRW 126

---

>RL3_RALSO (Q8XV12) 50S ribosomal protein L3|
          Length = 220

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F  D+ ID+ G T GKGY G + R+  +  R      R       IG A  P RV    
Sbjct: 103 LFSVDQKIDVQGTTIGKGYAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
              G  G   RT  N  + +I
Sbjct: 163 RMTGHMGDVTRTVQNLVIVRI 183

---

>RL3_XYLFA (Q9PE76) 50S ribosomal protein L3|
          Length = 215

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 415
           ++F   + +DI G+TKGKG++G + R    R+   TH         G+      P RV  
Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163

Query: 414 TVARAGQNGYHHRTEMNKKVYKI 346
               +G  G   ++  N +V KI
Sbjct: 164 GKKMSGHMGAVRQSVQNLEVVKI 186

---

>RL3_STRAW (Q82DP5) 50S ribosomal protein L3|
          Length = 214

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYT 412
           F+    +D+ G +KGKG+ GV+ R      G     ++ HR    +   G   P RV   
Sbjct: 105 FEAGVKVDVTGKSKGKGFAGVMKRHNFKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKG 162

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
           +  AG+ G    T  N  V+ +
Sbjct: 163 LRMAGRMGNERVTTQNLTVHAV 184

---

>RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3|
          Length = 255

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACIG-AWHPARVSYTV 409
           F   + +DI GVT GKG+ G + RW    L R TH      R     G    P R     
Sbjct: 107 FVAGQKVDIQGVTVGKGFAGAMKRWNFGGL-RATHGVSVSHRSHGSTGNRQDPGRTFPGK 165

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
             AG  G    T +N  V+K+
Sbjct: 166 KMAGHLGQETVTTLNVTVWKV 186

---

>RL3_MYCPN (P75580) 50S ribosomal protein L3|
          Length = 287

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARA 400
           +FQ  E +D+  ++KG+G+ G + RW     P             GA +P R   +V +A
Sbjct: 101 LFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGH----------GAGYPHRFQGSV-QA 149

Query: 399 GQNGYHHRTEMNKKVYKIGKV-GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 223
           G+ G        ++V+K  K+ G   H+  T  +        + GF    ++    +++ 
Sbjct: 150 GRGG-----ASAQRVFKGKKMSGHYGHEKVTVQN------LRIVGFDEANML----VLVS 194

Query: 222 GCCVGPKKRVVTLRQSLLK 166
           G   GP+  VV +R +  K
Sbjct: 195 GAIAGPEGGVVLIRTAKKK 213

---

>RL3_XYLFT (Q87E82) 50S ribosomal protein L3|
          Length = 215

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = -1

Query: 582 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 415
           ++F   + +DI G+TKGKG++G + R    R+   TH         G+      P RV  
Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163

Query: 414 TVARAGQNGYHHRTEMNKKVYKI 346
               +G  G   ++  N +V KI
Sbjct: 164 GKKMSGHMGAVKQSVQNLEVIKI 186

---

>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 382 VVSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTD 549
           V  I+T   N     S+  G+     +KT +GL    G TP  +N F    ++L  GY+ 
Sbjct: 67  VGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSG 126

Query: 550 D 552
           D
Sbjct: 127 D 127

---

>RL3_PSEPK (Q88QN5) 50S ribosomal protein L3|
          Length = 211

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRW 502
           +F   +++D+ G +KGKG+ G + RW
Sbjct: 100 LFTAGQLVDVTGQSKGKGFAGTIKRW 125

---

>RL3_YERPS (P11252) 50S ribosomal protein L3|
          Length = 209

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 502
           +E+ ++ +F   + +D+ G +KGKG+ G V RW
Sbjct: 94  QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3|
          Length = 209

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 502
           +E+ ++ +F   + +D+ G +KGKG+ G V RW
Sbjct: 94  QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_ONYPE (P60455) 50S ribosomal protein L3|
          Length = 157

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 484
           +FQ  +++D+ G +KGKG+ G + R   +R P
Sbjct: 42  LFQVGDLVDVTGTSKGKGFAGSIKRHNQSRGP 73

---

>RL3_WIGBR (Q8D212) 50S ribosomal protein L3|
          Length = 215

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = -1

Query: 558 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 388
           ++I G++KGKG+ G + RW            L  R    IG    P +V      +G  G
Sbjct: 107 VNITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLG 166

Query: 387 YHHRTEMNKKVYKI 346
           Y+  T  N  V KI
Sbjct: 167 YNKNTVKNLFVVKI 180

---

>RL3_STRCO (Q9L0E0) 50S ribosomal protein L3|
          Length = 214

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = -1

Query: 600 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HP 430
           +E+  +A F+    +D+   +KGKG+ GV+ R      +     HR  R    IG    P
Sbjct: 98  QEITAEA-FESGVKVDVTAKSKGKGFAGVMKRHNFKGGKASHGAHRVHRMPGSIGGCATP 156

Query: 429 ARVSYTVARAGQNGYHHRTEMNKKVYKI 346
            RV   +  AG+ G    T  N  V+ +
Sbjct: 157 GRVFKGMRMAGRMGNERVTTQNLTVHAV 184

---

>RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3|
          Length = 209

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRW 502
           +F   + +D+ G +KGKG+ G V RW
Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_SHEON (Q8EK68) 50S ribosomal protein L3|
          Length = 212

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F     +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 103 IFADVAKVDVTGQSKGKGFQGGVKRWNF-RTQDMTHGNSLSHRSNGSIGQNQTPGRVFKG 161

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              +G  G    T  N  V ++
Sbjct: 162 KKMSGHMGAERVTTQNLDVVRV 183

---

>RL3_SHIFL (P60447) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SALTY (P60446) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SALTI (P60445) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECOLI (P60438) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECOL6 (P60439) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECO57 (P60440) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 412
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 411 VARAGQNGYHHRTEMNKKVYKI 346
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)|
           (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment)
          Length = 572

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -1

Query: 423 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 259
           + Y     G + Y        +   +G  GQ     ET+ + +  +R++ D+TP+GG P 
Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460

Query: 258 YGV 250
            GV
Sbjct: 461 RGV 463

---

>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 34  SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 183
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

---

>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 34  SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 183
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

---

>RL3_BRAJA (Q89J84) 50S ribosomal protein L3|
          Length = 238

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -1

Query: 594 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 472
           +P+ A  Q D     + +D+ G + GKG+ G + RW    L R TH
Sbjct: 91  IPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGL-RATH 135

---

>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)|
          Length = 241

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -1

Query: 594 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 472
           +P+ A  Q D     + +D+ G + GKG+ G + RW    L R TH
Sbjct: 91  LPVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGL-RATH 135

---

>RL3_PROMM (Q7V542) 50S ribosomal protein L3|
          Length = 218

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGA-WHPARVSYTVAR 403
           F+  + +D+ G T G+G+ G   R G +R P     +  R+    GA   P R+      
Sbjct: 102 FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRM 161

Query: 402 AGQNGYHHRTEMNKKVYKI 346
           AG+ G   RT     + K+
Sbjct: 162 AGRYGGKKRTTRGLTILKV 180

---

>PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1003

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 393 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 494
           +D+ E++ R P +++R   R    D C SC EGG
Sbjct: 33  TDEAEKRSRKPEKESRRSGRATNHDSCDSCKEGG 66

---

>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 924

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = +1

Query: 88  ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 267
           E+  P     ++  E   L C  RG    G+      + WP+   +  +  G +H +   
Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729

Query: 268 ATHGSD 285
           A HG+D
Sbjct: 730 A-HGTD 734

---

>RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)|
          Length = 140

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWG 499
           F+  + +D+ G +KGKG+ GV+ R G
Sbjct: 105 FEAGQFVDVTGKSKGKGFAGVMKRHG 130

---

>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 366

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +1

Query: 10  KMTQLILRSSSSLELAIEPLL--LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 183
           ++ +++LR+S  L + ++P    ++     + P+L         D+ Q +T+G ++  + 
Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275

Query: 184 EGHHTLLWPDTASLDHQVVGLHHTIVR 264
           E    ++  D   LD Q      T++R
Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302

---

>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 315

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +1

Query: 28  LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHH 195
           LR  S L LA+ P L    L G ++T + KL  G    E D +   T GL + GLA  HH
Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183

Query: 196 TLLWP 210
            +L P
Sbjct: 184 EVLAP 188

---

>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1776

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/85 (21%), Positives = 35/85 (41%)
 Frame = +2

Query: 122  TNLSLISSSARREVCFSRDWRRVTTRFFGPTQHPLIIR*SAFTTP**GKPPMGVMSFSVL 301
            T  +++S+++R +     DWR    R F  +QH                         V 
Sbjct: 1400 TQATIVSNASRSDP----DWRYTVVRIFAKSQH------------------------KVN 1431

Query: 302  SNSVEASWVSCPTLPILYTFLFISV 376
              S+  SW +C TL +++ F+ +++
Sbjct: 1432 DGSIFGSWKACQTLALMHDFVILTL 1456

---

>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 7389

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = +1

Query: 1    RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGL 165
            R+  +T+L    + +LE A++   L G L++   +L   +DK+E++ L  ET+GL
Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567

---

>RL3_RHOBA (Q7UN20) 50S ribosomal protein L3|
          Length = 228

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 5/139 (3%)
 Frame = -1

Query: 576 FQKDEMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACIGAWHPARVSYT 412
           F   + +DI G +KG+G+ GV+ R        T   +K HR         +  P+R    
Sbjct: 119 FNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSAS--PSRTFKG 176

Query: 411 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 232
              AGQ G    T  N +V ++        DA                         + L
Sbjct: 177 KRMAGQYGNAKVTTRNLEVVRV--------DAEN-----------------------NLL 205

Query: 231 MIKGCCVGPKKRVVTLRQS 175
           MI+G   GP    V++RQ+
Sbjct: 206 MIRGAVPGPNGGFVSIRQT 224

---

>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1004

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 393 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 494
           +D+ E++ R P ++ R   R    D C SC EGG
Sbjct: 33  TDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGG 66

---

>RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3|
          Length = 196

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = -1

Query: 564 EMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAG 397
           + ID+ G + GKG+ G+  R   TR P     K HR    +       P RV      AG
Sbjct: 95  QFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGM--GTTPGRVLPGKKMAG 152

Query: 396 QNGYHHRTEMNKKVYKIGKVGQE 328
           Q G  ++    KK+  I   G E
Sbjct: 153 QLG--NKVTKTKKLKIIQVNGNE 173

---

>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3084

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 330  ETHDASTEFDRTEKDITPMGGFPHYGVVK 244
            ET  A+++ +R EKD+  +GG PH   V+
Sbjct: 2426 ETPGAASDLNRLEKDLIYVGGLPHSKAVR 2454

---

>RL3_NITEU (Q82X88) 50S ribosomal protein L3|
          Length = 215

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = -1

Query: 579 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F+    +D+ G++ GKGY G + R  +  +R      R       IG A  P RV    
Sbjct: 103 LFEVGSKVDVCGISIGKGYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162

Query: 408 ARAGQNGYHHRTEMNKKVYKI 346
              G  G    T  N +V ++
Sbjct: 163 KMTGHLGNAQCTVQNIEVVRV 183


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,617,053
Number of Sequences: 219361
Number of extensions: 2135745
Number of successful extensions: 6743
Number of sequences better than 10.0: 194
Number of HSP's better than 10.0 without gapping: 6394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6664
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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