ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34o04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX5_MESAU (P51399) Arachidonate 5-lipoxygenase (EC 1.13.11.34) ... 28 4.4
2MAS1L_HUMAN (P35410) Mas-related G-protein coupled receptor MRG ... 27 9.8

>LOX5_MESAU (P51399) Arachidonate 5-lipoxygenase (EC 1.13.11.34)|
           (5-lipoxygenase) (5-LO)
          Length = 672

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +3

Query: 90  KRLYNLPKVLPTYSETTAVSFSRH---EK*SQERNILTIKFVLPADGKSVAANRMAYVEH 260
           KR   LP+ LP  +E    S  RH   E+  QE NI  + + L  DG  + AN+     H
Sbjct: 245 KRCRELPQKLPVTTEMVECSLERHLSLEQEVQEGNIFIVDYEL-LDG--IDANKTDPCTH 301

Query: 261 GWLA 272
            +LA
Sbjct: 302 QFLA 305



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>MAS1L_HUMAN (P35410) Mas-related G-protein coupled receptor MRG (MAS-R)|
           (MAS1-like)
          Length = 378

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 69  VCICIVDNFSCKDCVNYLFDCWY 1
           VC+C++   S + CV  LF  WY
Sbjct: 159 VCLCLLVAISTERCVCVLFPIWY 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,595,955
Number of Sequences: 219361
Number of extensions: 848276
Number of successful extensions: 1926
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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