| Clone Name | rbags35c24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | YCE5_YEAST (P25574) Hypothetical 87.2 kDa protein in APA1/DTP-PD... | 46 | 9e-05 | 2 | CYPC_BACSU (O31440) Cytochrome P450 152A1 (EC 1.14.-.-) (P450BsB... | 30 | 4.0 | 3 | CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1) | 29 | 9.0 |
|---|
>YCE5_YEAST (P25574) Hypothetical 87.2 kDa protein in APA1/DTP-PDI1 intergenic| region Length = 760 Score = 45.8 bits (107), Expect = 9e-05 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = -3 Query: 589 QEKEEGIIPLTDYLPIIPQSYVTH--SLQVEALRGIVSIPAKLESTTLVFTYGVDLFYTR 416 ++KE P T +PI +TH +L + ++SIP LEST+++ G+D+F TR Sbjct: 652 KKKEFMATPYTPVIPINDNFIITHFRNLLPGSDSQLISIPTNLESTSIICDLGLDVFCTR 711 Query: 415 LAPSRTYDSLTDEF 374 + PS +D ++ F Sbjct: 712 ITPSGQFDLMSPTF 725
>CYPC_BACSU (O31440) Cytochrome P450 152A1 (EC 1.14.-.-) (P450BsBeta) (Fatty| acid beta-hydroxylase) Length = 417 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +1 Query: 115 LTAQVPHAVSSQESNFTLK---CYINNRTLALNKRKITMSTRAQNFICITTLEAS 270 + Q+PH S S LK +I NRT N +NFIC+T EA+ Sbjct: 1 MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAA 55
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 29.3 bits (64), Expect = 9.0 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Frame = -2 Query: 281 VEVIEASNVVMQMKFWALVDIVIFLLFSARVLLFM*HFKVKFD--------SWDDTA*GT 126 VE++ A NV+ Q++ IV LF ++ +F ++V+ S DDT Sbjct: 147 VEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEVESGEVLQISRTSSDDTGIDE 206 Query: 125 CAVRNPGHDIKELADHSWHPYT 60 C VR PG K + P T Sbjct: 207 CPVRLPGSQEKAILGRCVVPLT 228 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,282,971 Number of Sequences: 219361 Number of extensions: 1564055 Number of successful extensions: 3340 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3338 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)