ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1o08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF528524.1| Triticum aestivum putative glutamate decarboxylase 1 mRNA, partial cds Length = 383 Score = 504 bits (254), Expect = e-139 Identities = 323/338 (95%), Gaps = 6/338 (1%) Strand = Plus / Minus Query: 219 gcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacctc 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacctc 324 Query: 279 gcgctgcctcgccaggtccttctcgctcaccgtgtcgccgttggggtgctgcagggacgg 338 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 323 gcgctgcctggcgaggtccttctcgctcaccgtgtcgccgttggggtgctgcagggcggg 264 Query: 339 cccgctgctgcgcgaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgac 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 cccgctgctgcgcgaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgac 204 Query: 399 gaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacg-cggagcaccgtga 457 ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| Sbjct: 203 gaggcgctcggcgaaggtgcggctgaagtcctcgcggatgacgacgccggagcacggtga 144 Query: 458 -cgtgctgcgcgtcggggggcatggtgtaggccggcacgatcca-cccgaagc-ggcgca 514 |||||||||||||||||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 143 ccgtgctgcgcgtcggggggcatggtgta-gcgggcacgatccagcccgaagcgggcgca 85 Query: 515 -ggaactcggagatctcgaactcgtcgtgccggctgct 551 ||||||||||||||||||||||| ||||||||||||| Sbjct: 84 gggaactcggagatctcgaactcggcgtgccggctgct 47
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 446 bits (225), Expect = e-122 Identities = 305/332 (91%) Strand = Plus / Plus Query: 354 ggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcgaa 413 ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| Sbjct: 89794 ggggagcgcgtcgagctcgtgcagcaccttctcgacgtcgagcacgaggcgctcggcgag 89853 Query: 414 ggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggg 473 ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 89854 cgtgcggctgaagtcctcgcggatgacgacgcggagcacggtgacgtgctgcgcgtcggg 89913 Query: 474 gggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaa 533 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 89914 gggcatggtgtaggccggcacgatccagccgaagcggcggaggaagtcggagatctcgaa 89973 Query: 534 ctcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcctt 593 ||||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 89974 ctcgttgtgccgggcgctgtccttgagggagaaggccaccagcggcacgccgttgtcctt 90033 Query: 594 ggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttctc 653 |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 90034 ggacacgatgttgaaccgccccgtcttctccagcccctgcttcagcaccatcgcgttctc 90093 Query: 654 ctggcagttgtccatgatgttnctgtacccct 685 ||||||||| ||||||||||| ||||||||| Sbjct: 90094 ctggcagttctccatgatgttcttgtacccct 90125 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 218 agcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacct 277 |||||||||| | |||||||||| |||| |||||||||||||||| ||| | ||||| Sbjct: 89661 agcagacgccgttggtcttcttcttggccagcacggccctcttccagagggagatcacct 89720 Query: 278 cgcgctgcctcgccaggtccttctcgctc 306 |||||||| || ||| ||| |||||||| Sbjct: 89721 cgcgctgcttctccatctccctctcgctc 89749
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 446 bits (225), Expect = e-122 Identities = 305/332 (91%) Strand = Plus / Minus Query: 354 ggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcgaa 413 ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| Sbjct: 97877 ggggagcgcgtcgagctcgtgcagcaccttctcgacgtcgagcacgaggcgctcggcgag 97818 Query: 414 ggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggg 473 ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 97817 cgtgcggctgaagtcctcgcggatgacgacgcggagcacggtgacgtgctgcgcgtcggg 97758 Query: 474 gggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaa 533 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 97757 gggcatggtgtaggccggcacgatccagccgaagcggcggaggaagtcggagatctcgaa 97698 Query: 534 ctcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcctt 593 ||||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 97697 ctcgttgtgccgggcgctgtccttgagggagaaggccaccagcggcacgccgttgtcctt 97638 Query: 594 ggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttctc 653 |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 97637 ggacacgatgttgaaccgccccgtcttctccagcccctgcttcagcaccatcgcgttctc 97578 Query: 654 ctggcagttgtccatgatgttnctgtacccct 685 ||||||||| ||||||||||| ||||||||| Sbjct: 97577 ctggcagttctccatgatgttcttgtacccct 97546 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 218 agcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacct 277 |||||||||| | |||||||||| |||| |||||||||||||||| ||| | ||||| Sbjct: 98010 agcagacgccgttggtcttcttcttggccagcacggccctcttccagagggagatcacct 97951 Query: 278 cgcgctgcctcgccaggtccttctcgctc 306 |||||||| || ||| ||| |||||||| Sbjct: 97950 cgcgctgcttctccatctccctctcgctc 97922
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 446 bits (225), Expect = e-122 Identities = 305/332 (91%) Strand = Plus / Minus Query: 354 ggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcgaa 413 ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| Sbjct: 28914582 ggggagcgcgtcgagctcgtgcagcaccttctcgacgtcgagcacgaggcgctcggcgag 28914523 Query: 414 ggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggg 473 ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 28914522 cgtgcggctgaagtcctcgcggatgacgacgcggagcacggtgacgtgctgcgcgtcggg 28914463 Query: 474 gggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaa 533 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 28914462 gggcatggtgtaggccggcacgatccagccgaagcggcggaggaagtcggagatctcgaa 28914403 Query: 534 ctcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcctt 593 ||||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 28914402 ctcgttgtgccgggcgctgtccttgagggagaaggccaccagcggcacgccgttgtcctt 28914343 Query: 594 ggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttctc 653 |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 28914342 ggacacgatgttgaaccgccccgtcttctccagcccctgcttcagcaccatcgcgttctc 28914283 Query: 654 ctggcagttgtccatgatgttnctgtacccct 685 ||||||||| ||||||||||| ||||||||| Sbjct: 28914282 ctggcagttctccatgatgttcttgtacccct 28914251 Score = 379 bits (191), Expect = e-102 Identities = 298/334 (89%) Strand = Plus / Minus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||| Sbjct: 7153158 gaggggagcgcgtcgagctggtacatcaccttctcgatgtcgaggacgaggcgctcggcg 7153099 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 7153098 agggtgcggctgaactcctcccggatgaccacgcggagcaccgtgacgtgctgggcgtcg 7153039 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 7153038 ggcggcatggtgtacgccggcacgatccagccgaagcggcgcagcatgtcggagatctcg 7152979 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcc 591 ||||||||||||||||| | ||||||||| ||||| ||||||||||| || || | |||| Sbjct: 7152978 aactcgtcgtgccggctccggtccttgagcgagaacgccaccagcggcaccccttcgtcc 7152919 Query: 592 ttggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttc 651 ||||||||||||| ||||| ||||| | ||||||| ||||| ||||||||||||||| Sbjct: 7152918 ttggacacgatgtcgaacctccccgtcttcaccagcccttccttcagcaccatcgcgttc 7152859 Query: 652 tcctggcagttgtccatgatgttnctgtacccct 685 || |||||||| ||||||||||| |||||||||| Sbjct: 7152858 tcgtggcagttctccatgatgttcctgtacccct 7152825 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 218 agcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacct 277 |||||||||| | |||||||||| |||| |||||||||||||||| ||| | ||||| Sbjct: 28914715 agcagacgccgttggtcttcttcttggccagcacggccctcttccagagggagatcacct 28914656 Query: 278 cgcgctgcctcgccaggtccttctcgctc 306 |||||||| || ||| ||| |||||||| Sbjct: 28914655 cgcgctgcttctccatctccctctcgctc 28914627
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 446 bits (225), Expect = e-122 Identities = 305/332 (91%) Strand = Plus / Minus Query: 354 ggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcgaa 413 ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| Sbjct: 29006004 ggggagcgcgtcgagctcgtgcagcaccttctcgacgtcgagcacgaggcgctcggcgag 29005945 Query: 414 ggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggg 473 ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 29005944 cgtgcggctgaagtcctcgcggatgacgacgcggagcacggtgacgtgctgcgcgtcggg 29005885 Query: 474 gggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaa 533 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 29005884 gggcatggtgtaggccggcacgatccagccgaagcggcggaggaagtcggagatctcgaa 29005825 Query: 534 ctcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcctt 593 ||||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 29005824 ctcgttgtgccgggcgctgtccttgagggagaaggccaccagcggcacgccgttgtcctt 29005765 Query: 594 ggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttctc 653 |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 29005764 ggacacgatgttgaaccgccccgtcttctccagcccctgcttcagcaccatcgcgttctc 29005705 Query: 654 ctggcagttgtccatgatgttnctgtacccct 685 ||||||||| ||||||||||| ||||||||| Sbjct: 29005704 ctggcagttctccatgatgttcttgtacccct 29005673 Score = 379 bits (191), Expect = e-102 Identities = 298/334 (89%) Strand = Plus / Minus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||| Sbjct: 7151053 gaggggagcgcgtcgagctggtacatcaccttctcgatgtcgaggacgaggcgctcggcg 7150994 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 7150993 agggtgcggctgaactcctcccggatgaccacgcggagcaccgtgacgtgctgggcgtcg 7150934 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 7150933 ggcggcatggtgtacgccggcacgatccagccgaagcggcgcagcatgtcggagatctcg 7150874 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcc 591 ||||||||||||||||| | ||||||||| ||||| ||||||||||| || || | |||| Sbjct: 7150873 aactcgtcgtgccggctccggtccttgagcgagaacgccaccagcggcaccccttcgtcc 7150814 Query: 592 ttggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttc 651 ||||||||||||| ||||| ||||| | ||||||| ||||| ||||||||||||||| Sbjct: 7150813 ttggacacgatgtcgaacctccccgtcttcaccagcccttccttcagcaccatcgcgttc 7150754 Query: 652 tcctggcagttgtccatgatgttnctgtacccct 685 || |||||||| ||||||||||| |||||||||| Sbjct: 7150753 tcgtggcagttctccatgatgttcctgtacccct 7150720 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 218 agcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacct 277 |||||||||| | |||||||||| |||| |||||||||||||||| ||| | ||||| Sbjct: 29006137 agcagacgccgttggtcttcttcttggccagcacggccctcttccagagggagatcacct 29006078 Query: 278 cgcgctgcctcgccaggtccttctcgctc 306 |||||||| || ||| ||| |||||||| Sbjct: 29006077 cgcgctgcttctccatctccctctcgctc 29006049
>dbj|AK101171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028M11, full insert sequence Length = 2064 Score = 446 bits (225), Expect = e-122 Identities = 305/332 (91%) Strand = Plus / Minus Query: 354 ggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcgaa 413 ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| Sbjct: 1645 ggggagcgcgtcgagctcgtgcagcaccttctcgacgtcgagcacgaggcgctcggcgag 1586 Query: 414 ggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggg 473 ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 1585 cgtgcggctgaagtcctcgcggatgacgacgcggagcacggtgacgtgctgcgcgtcggg 1526 Query: 474 gggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaa 533 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 1525 gggcatggtgtaggccggcacgatccagccgaagcggcggaggaagtcggagatctcgaa 1466 Query: 534 ctcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcctt 593 ||||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 1465 ctcgttgtgccgggcgctgtccttgagggagaaggccaccagcggcacgccgttgtcctt 1406 Query: 594 ggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttctc 653 |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 1405 ggacacgatgttgaaccgccccgtcttctccagcccctgcttcagcaccatcgcgttctc 1346 Query: 654 ctggcagttgtccatgatgttnctgtacccct 685 ||||||||| ||||||||||| ||||||||| Sbjct: 1345 ctggcagttctccatgatgttcttgtacccct 1314 Score = 65.9 bits (33), Expect = 2e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 218 agcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacct 277 |||||||||| | |||||||||| |||| || |||||||||||||||| ||| | ||||| Sbjct: 1777 agcagacgccgttggtcttcttcttggcagc-acggccctcttccagagggagatcacct 1719 Query: 278 cgcgctgcctcgccaggtccttctcgctc 306 |||||||| || ||| ||| |||||||| Sbjct: 1718 cgcgctgcttctccatctccctctcgctc 1690
>gb|AY318775.1| Oryza sativa glutamate decarboxylase (GAD) gene, GAD-3 allele, complete cds Length = 2441 Score = 379 bits (191), Expect = e-102 Identities = 298/334 (89%) Strand = Plus / Minus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||| Sbjct: 2305 gaggggagcgcgtcgagctggtacatcaccttctcgatgtcgaggacgaggcgctcggcg 2246 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 2245 agggtgcggctgaactcctcccggatgaccacgcggagcaccgtgacgtgctgggcgtcg 2186 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 2185 ggcggcatggtgtacgccggcacgatccagccgaagcggcgcagcatgtcggagatctcg 2126 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcc 591 ||||||||||||||||| | ||||||||| ||||| ||||||||||| || || | |||| Sbjct: 2125 aactcgtcgtgccggctccggtccttgagcgagaacgccaccagcggcaccccttcgtcc 2066 Query: 592 ttggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttc 651 ||||||||||||| ||||| ||||| | ||||||| ||||| ||||||||||||||| Sbjct: 2065 ttggacacgatgtcgaacctccccgtcttcaccagcccttccttcagcaccatcgcgttc 2006 Query: 652 tcctggcagttgtccatgatgttnctgtacccct 685 || |||||||| ||||||||||| |||||||||| Sbjct: 2005 tcgtggcagttctccatgatgttcctgtacccct 1972
>gb|AY187941.1| Oryza sativa (japonica cultivar-group) glutamate decarboxylase (GAD3) mRNA, complete cds Length = 1502 Score = 379 bits (191), Expect = e-102 Identities = 298/334 (89%) Strand = Plus / Minus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||| Sbjct: 1366 gaggggagcgcgtcgagctggtacatcaccttctcgatgtcgaggacgaggcgctcggcg 1307 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 1306 agggtgcggctgaactcctcccggatgaccacgcggagcaccgtgacgtgctgggcgtcg 1247 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 1246 ggcggcatggtgtacgccggcacgatccagccgaagcggcgcagcatgtcggagatctcg 1187 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcc 591 ||||||||||||||||| | ||||||||| ||||| ||||||||||| || || | |||| Sbjct: 1186 aactcgtcgtgccggctccggtccttgagcgagaacgccaccagcggcaccccttcgtcc 1127 Query: 592 ttggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttc 651 ||||||||||||| ||||| ||||| | ||||||| ||||| ||||||||||||||| Sbjct: 1126 ttggacacgatgtcgaacctccccgtcttcaccagcccttccttcagcaccatcgcgttc 1067 Query: 652 tcctggcagttgtccatgatgttnctgtacccct 685 || |||||||| ||||||||||| |||||||||| Sbjct: 1066 tcgtggcagttctccatgatgttcctgtacccct 1033
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 379 bits (191), Expect = e-102 Identities = 298/334 (89%) Strand = Plus / Plus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||| Sbjct: 41180 gaggggagcgcgtcgagctggtacatcaccttctcgatgtcgaggacgaggcgctcggcg 41239 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 41240 agggtgcggctgaactcctcccggatgaccacgcggagcaccgtgacgtgctgggcgtcg 41299 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 41300 ggcggcatggtgtacgccggcacgatccagccgaagcggcgcagcatgtcggagatctcg 41359 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcc 591 ||||||||||||||||| | ||||||||| ||||| ||||||||||| || || | |||| Sbjct: 41360 aactcgtcgtgccggctccggtccttgagcgagaacgccaccagcggcaccccttcgtcc 41419 Query: 592 ttggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttc 651 ||||||||||||| ||||| ||||| | ||||||| ||||| ||||||||||||||| Sbjct: 41420 ttggacacgatgtcgaacctccccgtcttcaccagcccttccttcagcaccatcgcgttc 41479 Query: 652 tcctggcagttgtccatgatgttnctgtacccct 685 || |||||||| ||||||||||| |||||||||| Sbjct: 41480 tcgtggcagttctccatgatgttcctgtacccct 41513
>dbj|AK071556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101A16, full insert sequence Length = 2018 Score = 379 bits (191), Expect = e-102 Identities = 298/334 (89%) Strand = Plus / Minus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||| Sbjct: 1543 gaggggagcgcgtcgagctggtacatcaccttctcgatgtcgaggacgaggcgctcggcg 1484 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 1483 agggtgcggctgaactcctcccggatgaccacgcggagcaccgtgacgtgctgggcgtcg 1424 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 1423 ggcggcatggtgtacgccggcacgatccagccgaagcggcgcagcatgtcggagatctcg 1364 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcc 591 ||||||||||||||||| | ||||||||| ||||| ||||||||||| || || | |||| Sbjct: 1363 aactcgtcgtgccggctccggtccttgagcgagaacgccaccagcggcaccccttcgtcc 1304 Query: 592 ttggacacgatgttgaaccggcccgtgcgctccagcccctccttgagcaccatcgcgttc 651 ||||||||||||| ||||| ||||| | ||||||| ||||| ||||||||||||||| Sbjct: 1303 ttggacacgatgtcgaacctccccgtcttcaccagcccttccttcagcaccatcgcgttc 1244 Query: 652 tcctggcagttgtccatgatgttnctgtacccct 685 || |||||||| ||||||||||| |||||||||| Sbjct: 1243 tcgtggcagttctccatgatgttcctgtacccct 1210
>dbj|AK120961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039L12, full insert sequence Length = 720 Score = 365 bits (184), Expect = 1e-97 Identities = 238/256 (92%) Strand = Plus / Minus Query: 354 ggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcgaa 413 ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| Sbjct: 256 ggggagcgcgtcgagctcgtgcagcaccttctcgacgtcgagcacgaggcgctcggcgag 197 Query: 414 ggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggg 473 ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 196 cgtgcggctgaagtcctcgcggatgacgacgcggagcacggtgacgtgctgcgcgtcggg 137 Query: 474 gggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaa 533 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 136 gggcatggtgtaggccggcacgatccagccgaagcggcggaggaagtcggagatctcgaa 77 Query: 534 ctcgtcgtgccggctgctgtccttgagggagaaggccaccagcgggacgccctggtcctt 593 ||||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 76 ctcgttgtgccgggcgctgtccttgagggagaaggccaccagcggcacgccgttgtcctt 17 Query: 594 ggacacgatgttgaac 609 |||||||||||||||| Sbjct: 16 ggacacgatgttgaac 1 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 218 agcagacgccctgggtcttcttcctggcggcgacggccctcttccagacggacaccacct 277 |||||||||| | |||||||||| |||| |||||||||||||||| ||| | ||||| Sbjct: 389 agcagacgccgttggtcttcttcttggccagcacggccctcttccagagggagatcacct 330 Query: 278 cgcgctgcctcgccaggtccttctcgctc 306 |||||||| || ||| ||| |||||||| Sbjct: 329 cgcgctgcttctccatctccctctcgctc 301
>ref|XM_475239.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 168 bits (85), Expect = 2e-38 Identities = 191/227 (84%), Gaps = 12/227 (5%) Strand = Plus / Minus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 365 gaggggagcgcgtcgagctggcacatcaccttctcgatgtcgaggacgaggcgctcggcg 306 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||||| |||||||||| | ||||||| Sbjct: 305 agggtgcggctgaactcctcccggatgacgaagcggagcaccat---------cgcgtcg 255 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||| ||||| || ||||| ||||| | || ||||||| Sbjct: 254 ggcggcatggtgtacgccggcactatccagccaaagcgccgcagcatgtc---gatctcg 198 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgg 578 |||||||||||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 197 aactcgtcgtgcaggctcctgtccttgagcgagaacgccaccagcgg 151
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 168 bits (85), Expect = 2e-38 Identities = 191/227 (84%), Gaps = 12/227 (5%) Strand = Plus / Plus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 83103 gaggggagcgcgtcgagctggcacatcaccttctcgatgtcgaggacgaggcgctcggcg 83162 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||||| |||||||||| | ||||||| Sbjct: 83163 agggtgcggctgaactcctcccggatgacgaagcggagcaccat---------cgcgtcg 83213 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||| ||||| || ||||| ||||| | || ||||||| Sbjct: 83214 ggcggcatggtgtacgccggcactatccagccaaagcgccgcagcatgtc---gatctcg 83270 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgg 578 |||||||||||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 83271 aactcgtcgtgcaggctcctgtccttgagcgagaacgccaccagcgg 83317
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 168 bits (85), Expect = 2e-38 Identities = 191/227 (84%), Gaps = 12/227 (5%) Strand = Plus / Plus Query: 352 gaggggagcgcgtcgagctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcg 411 ||||||||||||||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 20539624 gaggggagcgcgtcgagctggcacatcaccttctcgatgtcgaggacgaggcgctcggcg 20539683 Query: 412 aaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcg 471 | |||||||||||| |||||||||| ||||| |||||||||| | ||||||| Sbjct: 20539684 agggtgcggctgaactcctcccggatgacgaagcggagcaccat---------cgcgtcg 20539734 Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcg 531 || ||||||||||| |||||||| ||||| || ||||| ||||| | || ||||||| Sbjct: 20539735 ggcggcatggtgtacgccggcactatccagccaaagcgccgcagcatgtc---gatctcg 20539791 Query: 532 aactcgtcgtgccggctgctgtccttgagggagaaggccaccagcgg 578 |||||||||||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 20539792 aactcgtcgtgcaggctcctgtccttgagcgagaacgccaccagcgg 20539838
>ref|XM_462650.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 390 gtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggag 449 |||| ||| |||||||||||||| | ||||||||||||||| |||| ||||||||| | Sbjct: 1305 gtcggtgatgaggcgctcggcgaggccgcggctgaagtcctcgcggatgacgacgcgcat 1246 Query: 450 caccgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||| | |||||||| ||||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 1245 cacggcgacgtgctcagcgtcggcgggcatggtgtacgccggcacgatccagccgaagcg 1186 Query: 510 gcg 512 ||| Sbjct: 1185 gcg 1183 Score = 77.8 bits (39), Expect = 4e-11 Identities = 110/134 (82%) Strand = Plus / Minus Query: 552 gtccttgagggagaaggccaccagcgggacgccctggtccttggacacgatgttgaaccg 611 ||||||||||||||||||||||||||| ||||| |||||||||||| | || ||| | Sbjct: 1143 gtccttgagggagaaggccaccagcggcacgccggagtccttggacaccacgtcgaagtg 1084 Query: 612 gcccgtgcgctccagcccctccttgagcaccatcgcgttctcctggcagttgtccatgat 671 |||||| ||| | ||||||| ||||||| ||||||| ||| ||||||| | |||||| Sbjct: 1083 gcccgtcttctcgatcccctcccggagcaccgtcgcgttgtcccggcagttctgcatgat 1024 Query: 672 gttnctgtacccct 685 || ||||||||| Sbjct: 1023 gtccttgtacccct 1010
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 390 gtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggag 449 |||| ||| |||||||||||||| | ||||||||||||||| |||| ||||||||| | Sbjct: 22289228 gtcggtgatgaggcgctcggcgaggccgcggctgaagtcctcgcggatgacgacgcgcat 22289287 Query: 450 caccgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||| | |||||||| ||||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 22289288 cacggcgacgtgctcagcgtcggcgggcatggtgtacgccggcacgatccagccgaagcg 22289347 Query: 510 gcg 512 ||| Sbjct: 22289348 gcg 22289350 Score = 77.8 bits (39), Expect = 4e-11 Identities = 110/134 (82%) Strand = Plus / Plus Query: 552 gtccttgagggagaaggccaccagcgggacgccctggtccttggacacgatgttgaaccg 611 ||||||||||||||||||||||||||| ||||| |||||||||||| | || ||| | Sbjct: 22289390 gtccttgagggagaaggccaccagcggcacgccggagtccttggacaccacgtcgaagtg 22289449 Query: 612 gcccgtgcgctccagcccctccttgagcaccatcgcgttctcctggcagttgtccatgat 671 |||||| ||| | ||||||| ||||||| ||||||| ||| ||||||| | |||||| Sbjct: 22289450 gcccgtcttctcgatcccctcccggagcaccgtcgcgttgtcccggcagttctgcatgat 22289509 Query: 672 gttnctgtacccct 685 || ||||||||| Sbjct: 22289510 gtccttgtacccct 22289523 Score = 71.9 bits (36), Expect = 3e-09 Identities = 86/100 (86%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 418 cggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgc-gcgtcgggggg 476 |||| |||||| |||||||||||||||||||||||||| | ||||| | ||| | | || Sbjct: 22306619 cggccgaagtcttcccggacgacgacgcggagcaccgtcatgtgctccagcg-ccgccgg 22306561 Query: 477 catggtgtaggccggcacgatccacccgaagcggcgcagg 516 ||| ||||| |||||||||||||||||| | ||||||||| Sbjct: 22306560 catcgtgtacgccggcacgatccacccgtaccggcgcagg 22306521 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 564 gaaggccaccagcgggacgccctggtccttggacacgatgttgaaccggcccgt 617 ||||||||||||||| ||||||| |||||||| | |||| ||||||| ||||| Sbjct: 22306473 gaaggccaccagcggcacgccctcctccttggagatgatggtgaaccgccccgt 22306420
>dbj|AK070858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068K15, full insert sequence Length = 1917 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 390 gtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggag 449 |||| ||| |||||||||||||| | ||||||||||||||| |||| ||||||||| | Sbjct: 1421 gtcggtgatgaggcgctcggcgaggccgcggctgaagtcctcgcggatgacgacgcgcat 1362 Query: 450 caccgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||| | |||||||| ||||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 1361 cacggcgacgtgctcagcgtcggcgggcatggtgtacgccggcacgatccagccgaagcg 1302 Query: 510 gcg 512 ||| Sbjct: 1301 gcg 1299 Score = 77.8 bits (39), Expect = 4e-11 Identities = 110/134 (82%) Strand = Plus / Minus Query: 552 gtccttgagggagaaggccaccagcgggacgccctggtccttggacacgatgttgaaccg 611 ||||||||||||||||||||||||||| ||||| |||||||||||| | || ||| | Sbjct: 1259 gtccttgagggagaaggccaccagcggcacgccggagtccttggacaccacgtcgaagtg 1200 Query: 612 gcccgtgcgctccagcccctccttgagcaccatcgcgttctcctggcagttgtccatgat 671 |||||| ||| | ||||||| ||||||| ||||||| ||| ||||||| | |||||| Sbjct: 1199 gcccgtcttctcgatcccctcccggagcaccgtcgcgttgtcccggcagttctgcatgat 1140 Query: 672 gttnctgtacccct 685 || ||||||||| Sbjct: 1139 gtccttgtacccct 1126
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 390 gtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggag 449 |||| ||| |||||||||||||| | ||||||||||||||| |||| ||||||||| | Sbjct: 40130 gtcggtgatgaggcgctcggcgaggccgcggctgaagtcctcgcggatgacgacgcgcat 40189 Query: 450 caccgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||| | |||||||| ||||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 40190 cacggcgacgtgctcagcgtcggcgggcatggtgtacgccggcacgatccagccgaagcg 40249 Query: 510 gcg 512 ||| Sbjct: 40250 gcg 40252 Score = 77.8 bits (39), Expect = 4e-11 Identities = 110/134 (82%) Strand = Plus / Plus Query: 552 gtccttgagggagaaggccaccagcgggacgccctggtccttggacacgatgttgaaccg 611 ||||||||||||||||||||||||||| ||||| |||||||||||| | || ||| | Sbjct: 40292 gtccttgagggagaaggccaccagcggcacgccggagtccttggacaccacgtcgaagtg 40351 Query: 612 gcccgtgcgctccagcccctccttgagcaccatcgcgttctcctggcagttgtccatgat 671 |||||| ||| | ||||||| ||||||| ||||||| ||| ||||||| | |||||| Sbjct: 40352 gcccgtcttctcgatcccctcccggagcaccgtcgcgttgtcccggcagttctgcatgat 40411 Query: 672 gttnctgtacccct 685 || ||||||||| Sbjct: 40412 gtccttgtacccct 40425 Score = 71.9 bits (36), Expect = 3e-09 Identities = 86/100 (86%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 418 cggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgc-gcgtcgggggg 476 |||| |||||| |||||||||||||||||||||||||| | ||||| | ||| | | || Sbjct: 57521 cggccgaagtcttcccggacgacgacgcggagcaccgtcatgtgctccagcg-ccgccgg 57463 Query: 477 catggtgtaggccggcacgatccacccgaagcggcgcagg 516 ||| ||||| |||||||||||||||||| | ||||||||| Sbjct: 57462 catcgtgtacgccggcacgatccacccgtaccggcgcagg 57423 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 564 gaaggccaccagcgggacgccctggtccttggacacgatgttgaaccggcccgt 617 ||||||||||||||| ||||||| |||||||| | |||| ||||||| ||||| Sbjct: 57375 gaaggccaccagcggcacgccctcctccttggagatgatggtgaaccgccccgt 57322
>ref|XM_482841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1732 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 1409 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 1350 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 1349 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 1290 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 1289 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 1231
>ref|XM_507262.1| PREDICTED Oryza sativa (japonica cultivar-group), P0104B02.16-1 mRNA Length = 1978 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 1525 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 1466 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 1465 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 1406 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 1405 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 1347
>ref|XM_482840.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 1314 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 1255 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 1254 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 1195 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 1194 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 1136
>gb|AY428025.2| Oryza sativa glutamate decarboxylase (GAD) mRNA, complete cds Length = 1518 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 1249 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 1190 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 1189 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 1130 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 1129 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 1071
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 22871945 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 22872004 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 22872005 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 22872064 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 22872065 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 22872123
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 45783 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 45842 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 45843 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 45902 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 45903 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 45961
>dbj|AK121088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065G12, full insert sequence Length = 1978 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 1525 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 1466 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 1465 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 1406 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 1405 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 1347
>dbj|AB056062.1| Oryza sativa (japonica cultivar-group) GAD gene for glutamate decarboxylase, complete cds Length = 5701 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 5195 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 5136 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 5135 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 5076 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 5075 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 5017
>dbj|AB056060.1| Oryza sativa (japonica cultivar-group) GAD mRNA for glutamate decarboxylase, complete cds, clone:OsGAD1 Length = 1779 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 1437 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 1378 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 1377 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 1318 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 1317 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 1259
>gb|AF353615.1| Nicotiana tabacum glutamate decarboxylase isozyme 3 mRNA, complete cds Length = 1776 Score = 103 bits (52), Expect = 8e-19 Identities = 169/208 (81%) Strand = Plus / Minus Query: 367 agctcgtggagcaccttctcgatgtcgatgacgaggcgctcggcgaaggtgcggctgaag 426 ||||||||||| ||||| | ||||||| |||||| ||||| || | ||| || |||| Sbjct: 1419 agctcgtggaggaccttgacaatgtcgaggacgagacgctctgctagggttcgcgagaag 1360 Query: 427 tcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggggggcatggtgtag 486 |||||||||| || || || |||||||||||||| || ||||| | |||||| |||||| Sbjct: 1359 tcctcccggatcaccacacgaagcaccgtgacgtgttgggcgtcagcgggcatcgtgtag 1300 Query: 487 gccggcacgatccacccgaagcggcgcaggaactcggagatctcgaactcgtcgtgccgg 546 ||||| |||||||||||||| | || || |||||| | ||||||||| | ||| ||| Sbjct: 1299 gccgggacgatccacccgaacctacggagcgtctcggacacctcgaactcattgtgacgg 1240 Query: 547 ctgctgtccttgagggagaaggccacca 574 || ||||||||||||| |||||||||| Sbjct: 1239 ctattgtccttgagggaaaaggccacca 1212
>dbj|AK061977.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A04, full insert sequence Length = 1732 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| || | Sbjct: 1409 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggacggc 1350 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 ||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 1349 gacgtgcccggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 1290 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||||||||||| ||||| ||||||| Sbjct: 1289 gtgctcggagatgtcgaacacggtgtacctgccgctgtccttgagcgagaacgccacca 1231
>gb|AF358767.1| Oryza sativa clone Osl9 glutamate decarboxylase mRNA, partial cds Length = 906 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 396 gacgaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgt 455 |||||| |||||||||| | | |||||||||||||||| || |||||||||||| | | Sbjct: 657 gacgagccgctcggcgaggctccggctgaagtcctccctgatgacgacgcggaggatggc 598 Query: 456 gacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcag 515 |||||||| |||| || ||||||||||| |||||||||||||| ||||| | | ||| Sbjct: 597 gacgtgctcggcgttggccggcatggtgtacgccggcacgatccagccgaacctcctcag 538 Query: 516 gaactcggagatctcgaactcgtcgtgccggctgctgtccttgagggagaaggccacca 574 | ||||||||| |||||| || || || || |||| ||||||| ||||| ||||||| Sbjct: 537 gtgctcggagatgtcgaacacggtgtacctgccgctggccttgagcgagaacgccacca 479
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 422 tgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggggggcatgg 481 ||||||||||||||| ||| | ||||||||| | || |||| |||||||| |||||||| Sbjct: 86449 tgaagtcctcccggatgactatgcggagcacggccacatgctccgcgtcggcgggcatgg 86508 Query: 482 tgtaggccggcacgatccacccgaa 506 |||| |||||||||||||||||||| Sbjct: 86509 tgtacgccggcacgatccacccgaa 86533
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 422 tgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggggggcatgg 481 ||||||||||||||| ||| | ||||||||| | || |||| |||||||| |||||||| Sbjct: 363 tgaagtcctcccggatgactatgcggagcacggccacatgctccgcgtcggcgggcatgg 422 Query: 482 tgtaggccggcacgatccacccgaa 506 |||| |||||||||||||||||||| Sbjct: 423 tgtacgccggcacgatccacccgaa 447
>gb|AY104454.1| Zea mays PCO117429 mRNA sequence Length = 1152 Score = 83.8 bits (42), Expect = 7e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 399 gaggcgctcggcgaaggtgcggctgaagtcctcccggacgacgacgcggagcaccgtgac 458 |||||||||||||| ||||||||||||||| |||| ||| ||||| | || | || Sbjct: 705 gaggcgctcggcgagcccgcggctgaagtcctcgcggatgaccacgcgcatgacggccac 646 Query: 459 gtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcggcgcagg 516 ||||| ||||||| ||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 645 gtgctcggcgtcggcgggcatggtataggccggcacgatccagccgaaccggcgcagg 588 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 552 gtccttgagggagaaggccaccagcgggacgccctggtccttggacac 599 |||||||||||||||||| |||||||| |||||| |||||||||||| Sbjct: 552 gtccttgagggagaaggcgaccagcggcacgcccgagtccttggacac 505
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 378 caccttctcgatgtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctc 431 ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 35454909 caccttctcgatgtcgaggacgaggcgctcggcgagagtgcggctgaactcctc 35454856
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 378 caccttctcgatgtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctc 431 ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 66430 caccttctcgatgtcgaggacgaggcgctcggcgagagtgcggctgaactcctc 66377
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 379 accttctcgatgtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctcccgg 435 |||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||| Sbjct: 25315033 accttctcgatgtcgaggacgaggcgctcagcgagagtgcggctgaactcctcccgg 25314977
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 379 accttctcgatgtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctcccgg 435 |||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||| Sbjct: 131704 accttctcgatgtcgaggacgaggcgctcagcgagagtgcggctgaactcctcccgg 131648
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 379 accttctcgatgtcgatgacgaggcgctcggcgaaggtgcggctgaagtcctcccgg 435 |||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||| Sbjct: 8123 accttctcgatgtcgaggacgaggcgctcagcgagagtgcggctgaactcctcccgg 8067
>ref|XM_462654.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1503 Score = 71.9 bits (36), Expect = 3e-09 Identities = 86/100 (86%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 418 cggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgc-gcgtcgggggg 476 |||| |||||| |||||||||||||||||||||||||| | ||||| | ||| | | || Sbjct: 1286 cggccgaagtcttcccggacgacgacgcggagcaccgtcatgtgctccagcg-ccgccgg 1228 Query: 477 catggtgtaggccggcacgatccacccgaagcggcgcagg 516 ||| ||||| |||||||||||||||||| | ||||||||| Sbjct: 1227 catcgtgtacgccggcacgatccacccgtaccggcgcagg 1188 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 564 gaaggccaccagcgggacgccctggtccttggacacgatgttgaaccggcccgt 617 ||||||||||||||| ||||||| |||||||| | |||| ||||||| ||||| Sbjct: 1140 gaaggccaccagcggcacgccctcctccttggagatgatggtgaaccgccccgt 1087
>dbj|AK068340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151F09, full insert sequence Length = 1753 Score = 71.9 bits (36), Expect = 3e-09 Identities = 86/100 (86%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 418 cggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgc-gcgtcgggggg 476 |||| |||||| |||||||||||||||||||||||||| | ||||| | ||| | | || Sbjct: 1377 cggccgaagtcttcccggacgacgacgcggagcaccgtcatgtgctccagcg-ccgccgg 1319 Query: 477 catggtgtaggccggcacgatccacccgaagcggcgcagg 516 ||| ||||| |||||||||||||||||| | ||||||||| Sbjct: 1318 catcgtgtacgccggcacgatccacccgtaccggcgcagg 1279 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 564 gaaggccaccagcgggacgccctggtccttggacacgatgttgaaccggcccgt 617 ||||||||||||||| ||||||| |||||||| | |||| ||||||| ||||| Sbjct: 1231 gaaggccaccagcggcacgccctcctccttggagatgatggtgaaccgccccgt 1178
>gb|AY103733.1| Zea mays PCO153431 mRNA sequence Length = 1168 Score = 67.9 bits (34), Expect = 4e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 645 cgcgttctcctggcagttgtccatgatgttnctgtacccct 685 |||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1164 cgcgttctcctggcagttctccatgatgtttctgtacccct 1124
>gb|DQ001727.1| Citrus sinensis glutamate decarboxylase mRNA, complete cds Length = 1779 Score = 63.9 bits (32), Expect = 6e-07 Identities = 152/192 (79%) Strand = Plus / Minus Query: 423 gaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggggggcatggt 482 |||||| |||| || |||||| || | ||| |||| |||||| ||||| | ||||||||| Sbjct: 1367 gaagtcttccctgatgacgacacgtaacacggtgatgtgctgagcgtcagcgggcatggt 1308 Query: 483 gtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaactcgtcgtg 542 ||| || ||||| ||||| || || |||||||| || |||| | ||||| || ||||| Sbjct: 1307 gtacgctggcacaatccaaccaaaacggcgcagcaattcggccacttcgaattcatcgtg 1248 Query: 543 ccggctgctgtccttgagggagaaggccaccagcgggacgccctggtccttggacacgat 602 || || |||||||||| || || ||||||| ||| || || | |||||| ||||| || Sbjct: 1247 gcgtttgttgtccttgagagaaaatgccaccaacggaaccccttcgtcctttgacacaat 1188 Query: 603 gttgaaccggcc 614 |||||| ||||| Sbjct: 1187 gttgaagcggcc 1176
>dbj|AB056063.1| Oryza sativa (japonica cultivar-group) GAD gene for glutamate decarboxylase, complete cds Length = 3983 Score = 56.0 bits (28), Expect = 2e-04 Identities = 84/100 (84%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 418 cggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgc-gcgtcgggggg 476 |||| |||||| ||||||||||||||||||| ||||| | ||||| | ||| || || Sbjct: 3427 cggccgaagtcttcccggacgacgacgcggacgaccgtcatgtgctccagcgccgccgg- 3369 Query: 477 catggtgtaggccggcacgatccacccgaagcggcgcagg 516 ||| ||||| |||||||||||||||||| | ||||||||| Sbjct: 3368 catcgtgtacgccggcacgatccacccgtaccggcgcagg 3329 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 564 gaaggccaccagcgggacgccctggtccttggacacgatgttgaaccggcccgt 617 ||||||||||||||| ||||||| |||||||| | |||| ||||||| ||||| Sbjct: 3281 gaaggccaccagcggcacgccctcctccttggagatgatggtgaaccgccccgt 3228
>dbj|AB056061.1| Oryza sativa (japonica cultivar-group) GAD mRNA for glutamate decarboxylase, complete cds, clone:OsGAD2 Length = 1781 Score = 56.0 bits (28), Expect = 2e-04 Identities = 84/100 (84%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 418 cggctgaagtcctcccggacgacgacgcggagcaccgtgacgtgctgc-gcgtcgggggg 476 |||| |||||| ||||||||||||||||||| ||||| | ||||| | ||| || || Sbjct: 1351 cggccgaagtcttcccggacgacgacgcggacgaccgtcatgtgctccagcgccgccgg- 1293 Query: 477 catggtgtaggccggcacgatccacccgaagcggcgcagg 516 ||| ||||| |||||||||||||||||| | ||||||||| Sbjct: 1292 catcgtgtacgccggcacgatccacccgtaccggcgcagg 1253 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 564 gaaggccaccagcgggacgccctggtccttggacacgatgttgaaccggcccgt 617 ||||||||||||||| ||||||| |||||||| | |||| ||||||| ||||| Sbjct: 1205 gaaggccaccagcggcacgccctcctccttggagatgatggtgaaccgccccgt 1152
>gb|AY323131.1| Glycine max putative glutamate decarboxylase (GAD) mRNA, partial cds Length = 1597 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 423 gaagtcctcccggacgacgacgcggagcaccgtgacgtgctgcgcgtcggggggcatggt 482 ||||||||||| || ||| || || ||||| ||||| || || || || ||||||||||| Sbjct: 1117 gaagtcctccctgatgacaacacgaagcactgtgacatgttgagcatctgggggcatggt 1058 Query: 483 gtaggccggcacgatccacccgaagcg 509 ||| || ||||| |||||||| ||||| Sbjct: 1057 gtatgctggcactatccacccaaagcg 1031
>emb|AJ717415.1| Lotus corniculatus var. japonicus mRNA for glutamate decarboxylase 1 (gad1 gene), clone LjGad1 Length = 1790 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 472 gggggcatggtgtaggccggcacgatccacccgaagcg 509 ||||||||| |||| |||||||| |||||||||||||| Sbjct: 1272 gggggcatgctgtatgccggcactatccacccgaagcg 1235
>ref|NM_126262.1| Arabidopsis thaliana calmodulin binding AT2G02010 mRNA, complete cds Length = 1791 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 454 gtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| |||||||| || | ||||| ||||||||||| |||||||| |||||||| Sbjct: 1343 gtgacatgctgcgcatccgcaggcatcgtgtaggccggaacgatccagccgaagcg 1288
>gb|AY124860.1| Arabidopsis thaliana At2g02010/F14H20.8 mRNA, complete cds Length = 1482 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 454 gtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| |||||||| || | ||||| ||||||||||| |||||||| |||||||| Sbjct: 1244 gtgacatgctgcgcatccgcaggcatcgtgtaggccggaacgatccagccgaagcg 1189
>gb|AC006532.5| Arabidopsis thaliana chromosome 2 clone F14H20 map CIC11A04, complete sequence Length = 76976 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 454 gtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| |||||||| || | ||||| ||||||||||| |||||||| |||||||| Sbjct: 46173 gtgacatgctgcgcatccgcaggcatcgtgtaggccggaacgatccagccgaagcg 46228 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 475 ggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| ||||||||||| |||||||| |||||||| Sbjct: 41345 ggcatcgtgtaggccggaacgatccagccgaagcg 41379
>gb|AF361836.1| Arabidopsis thaliana At2g02010/F14H20.8 mRNA, complete cds Length = 1792 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 454 gtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| |||||||| || | ||||| ||||||||||| |||||||| |||||||| Sbjct: 1343 gtgacatgctgcgcatccgcaggcatcgtgtaggccggaacgatccagccgaagcg 1288
>emb|BX820266.1|CNS0A9LG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1706 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 454 gtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| |||||||| || | ||||| ||||||||||| |||||||| |||||||| Sbjct: 1319 gtgacatgctgcgcatccgcaggcatcgtgtaggccggaacgatccagccgaagcg 1264
>ref|NM_126261.2| Arabidopsis thaliana calmodulin binding AT2G02000 mRNA, complete cds Length = 1711 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 475 ggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| ||||||||||| |||||||| |||||||| Sbjct: 1296 ggcatcgtgtaggccggaacgatccagccgaagcg 1262
>gb|AY559318.1| Brassica juncea glutamate decarboxylase 2 (GAD2) mRNA, complete cds Length = 1707 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Minus Query: 475 ggcatggtgtaggccggcacgatccacccgaagcggcgcaggaactcggagatctcgaac 534 ||||| ||||| ||||| || ||||| ||||| ||||| || | ||| ||||| |||||| Sbjct: 1265 ggcattgtgtaagccgggacaatccagccgaaacggcgtagcatctctgagatttcgaac 1206 Query: 535 tcgtcgtgccggctgctgtccttgagggagaaggc 569 |||| ||| ||| |||||||||||||||||| Sbjct: 1205 tcgttgtggaaactgtggtccttgagggagaaggc 1171
>dbj|AK118125.1| Arabidopsis thaliana At2g02000 mRNA for putative glutamate decarboxylase, complete cds, clone: RAFL19-41-E08 Length = 1712 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 475 ggcatggtgtaggccggcacgatccacccgaagcg 509 ||||| ||||||||||| |||||||| |||||||| Sbjct: 1296 ggcatcgtgtaggccggaacgatccagccgaagcg 1262
>emb|AJ417688.1|DRA417688 Deinococcus radiodurans smc gene Length = 3303 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 gacggcccgctgctgcgcgagg 355 |||||||||||||||||||||| Sbjct: 1660 gacggcccgctgctgcgcgagg 1681
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 gacggcccgctgctgcgcgagg 355 |||||||||||||||||||||| Sbjct: 1482343 gacggcccgctgctgcgcgagg 1482364
>ref|XM_516831.1| PREDICTED: Pan troglodytes similar to acetyl-coenzyme A transporter (LOC460796), mRNA Length = 3508 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 tgccggctgctgtccttgagggaga 565 |||||||||||||||||| |||||| Sbjct: 545 tgccggctgctgtccttgtgggaga 521
>ref|NM_004733.2| Homo sapiens solute carrier family 33 (acetyl-CoA transporter), member 1 (SLC33A1), mRNA Length = 2659 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 tgccggctgctgtccttgagggaga 565 |||||||||||||||||| |||||| Sbjct: 419 tgccggctgctgtccttgtgggaga 395
>gb|AY559319.1| Brassica juncea glutamate decarboxylase 4a (GAD4a) mRNA, complete cds Length = 1701 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 tcgagctcgtggagcaccttctcga 388 |||||||||||||| |||||||||| Sbjct: 1407 tcgagctcgtggagaaccttctcga 1383 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 474 gggcatggtgtaggccggcacgatccacccgaagcg 509 |||||| ||||||||||| || |||||||| ||||| Sbjct: 1297 gggcatcgtgtaggccggaacaatccacccaaagcg 1262
>ref|XM_813754.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510643.10) partial mRNA Length = 10476 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgctgctgcgcgaggggagcg 361 ||||||||||||||||||||| Sbjct: 10262 cgctgctgcgcgaggggagcg 10282
>gb|BC014416.1| Homo sapiens solute carrier family 33 (acetyl-CoA transporter), member 1, mRNA (cDNA clone MGC:20012 IMAGE:4559958), complete cds Length = 2407 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 tgccggctgctgtccttgagggaga 565 |||||||||||||||||| |||||| Sbjct: 447 tgccggctgctgtccttgtgggaga 423
>emb|AL035451.6|HS145B8 Human DNA sequence from clone RP6-145B8 on chromosome Xq21.2-22.3 Contains a thiopurine S-methyltransferase (TPMT) pseudogene, a stress-induced-phosphoprotein 1 (STIP1) pseudogene, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex (NDUFA5) pseudogene and the 5' end of the CHM gene for choroideremia (Rab escort protein 1), complete sequence Length = 115039 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 caagagaagcatagcataaaa 157 ||||||||||||||||||||| Sbjct: 33987 caagagaagcatagcataaaa 34007
>emb|CR622424.1| full-length cDNA clone CS0DM014YN17 of Fetal liver of Homo sapiens (human) Length = 2366 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 tgccggctgctgtccttgagggaga 565 |||||||||||||||||| |||||| Sbjct: 465 tgccggctgctgtccttgtgggaga 441
>ref|XM_392375.2| PREDICTED: Apis mellifera similar to dual specificity phosphatase 10 (LOC408844), mRNA Length = 1629 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cgcgaggggagcgcgtcgagc 369 ||||||||||||||||||||| Sbjct: 607 cgcgaggggagcgcgtcgagc 627
>gb|AC104472.14| Homo sapiens 3 BAC RP11-674E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158702 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 tgccggctgctgtccttgagggaga 565 |||||||||||||||||| |||||| Sbjct: 35540 tgccggctgctgtccttgtgggaga 35516
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 caaatatgccaagtactttac 46 ||||||||||||||||||||| Sbjct: 75961 caaatatgccaagtactttac 75981
>dbj|D88152.1| Homo sapiens mRNA for acetyl-coenzyme A transporter, complete cds Length = 2682 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 tgccggctgctgtccttgagggaga 565 |||||||||||||||||| |||||| Sbjct: 425 tgccggctgctgtccttgtgggaga 401
>gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete sequence Length = 182468 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 cggacaccacctcgcgctgcctcgccag 293 ||||||||||||||||||| | |||||| Sbjct: 40025 cggacaccacctcgcgctgtcccgccag 39998
>ref|NM_105268.4| Arabidopsis thaliana GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding AT1G65960 (GAD2) mRNA, complete cds Length = 1640 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1001 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 942 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 941 cgtagcatctcagagatctcgaactcgt 914
>ref|NM_104543.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT1G56670 mRNA, complete cds Length = 1207 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 aaattattacggaaataaaa 174 |||||||||||||||||||| Sbjct: 596 aaattattacggaaataaaa 615
>ref|NM_105269.2| Arabidopsis thaliana TPX2; antioxidant AT1G65970 (TPX2) mRNA, complete cds Length = 1260 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Plus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1064 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 1123 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 1124 cgtagcatctcagagatctcgaactcgt 1151
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 619 cgctccagcccctccttgagcacc 642 ||||||||| |||||||||||||| Sbjct: 3065914 cgctccagcgcctccttgagcacc 3065937
>ref|XM_715656.1| Candida albicans SC5314 hypothetical protein (CaO19_11790), mRNA Length = 2289 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ataaaattattacggaaata 171 |||||||||||||||||||| Sbjct: 595 ataaaattattacggaaata 614
>ref|XM_715529.1| Candida albicans SC5314 hypothetical protein (CaO19_4315), mRNA Length = 2283 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ataaaattattacggaaata 171 |||||||||||||||||||| Sbjct: 586 ataaaattattacggaaata 605
>gb|AC147171.3| Xenopus tropicalis clone CH216-162P3, complete sequence Length = 156475 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tgtttgtgcacaaatatgcc 35 |||||||||||||||||||| Sbjct: 91450 tgtttgtgcacaaatatgcc 91431
>gb|AY559320.1| Brassica juncea glutamate decarboxylase 4b (GAD4b) mRNA, complete cds Length = 1730 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 481 gtgtaggccggcacgatccacccgaagcggcg 512 ||||||||||| |||||||| || |||||||| Sbjct: 1298 gtgtaggccggaacgatccatccaaagcggcg 1267
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 cgatgacgaggcgctcggcg 411 |||||||||||||||||||| Sbjct: 50758 cgatgacgaggcgctcggcg 50777
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 619 cgctccagcccctccttgagcacc 642 ||||||||| |||||||||||||| Sbjct: 210265 cgctccagcgcctccttgagcacc 210288
>gb|AC132622.2| Mus musculus BAC clone RP23-108P15 from 18, complete sequence Length = 171209 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tagatgtttgtgcacaaata 31 |||||||||||||||||||| Sbjct: 113021 tagatgtttgtgcacaaata 113002
>gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, complete sequence Length = 218508 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 atgtttgtgcacaaatatgc 34 |||||||||||||||||||| Sbjct: 211247 atgtttgtgcacaaatatgc 211228
>ref|XM_660920.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50133) partial mRNA Length = 2622 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 acaaatatgccaagtacttt 44 |||||||||||||||||||| Sbjct: 1112 acaaatatgccaagtacttt 1131
>emb|AL445183.19| Human DNA sequence from clone RP11-334A14 on chromosome 1 Contains the 5' end of the SCP2 gene for sterol carrier protein 2, a pseudogene similar to part of related RAS viral (r-ras) oncogene homolog 2 (RRAS2), a beta polypeptide tubulin family pseudogene, the PODN gene for podocan, a likely ortholog of mouse hypoxia induced gene 1 (HIG1) pseudogene, two novel genes, the SLC1A7 gene for solute carrier family 1 (glutamate transporter) member 7 and a CpG island, complete sequence Length = 193774 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 atgccaagtactttactgtt 50 |||||||||||||||||||| Sbjct: 19097 atgccaagtactttactgtt 19116
>emb|AL391417.7| Human DNA sequence from clone RP11-15J23 on chromosome 6 Contains a novel pseudogene, complete sequence Length = 91355 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 aagagaagcatagcataaaa 157 |||||||||||||||||||| Sbjct: 6130 aagagaagcatagcataaaa 6111
>gb|AY071355.1| Drosophila melanogaster RE39037 full insert cDNA Length = 2561 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 cggacaccacctcgcgctgcctcgccag 293 ||||||||||||||||||| | |||||| Sbjct: 478 cggacaccacctcgcgctgtcccgccag 451
>gb|AC102437.5| Mus musculus, clone RP24-132C7, complete sequence Length = 134180 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tagatgtttgtgcacaaata 31 |||||||||||||||||||| Sbjct: 11891 tagatgtttgtgcacaaata 11872
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 619 cgctccagcccctccttgagcacc 642 ||||||||| |||||||||||||| Sbjct: 298155 cgctccagcgcctccttgagcacc 298178
>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3 Length = 89469 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 gttgttcaacacatacatgaaaat 71 |||| ||||||||||||||||||| Sbjct: 55901 gttgatcaacacatacatgaaaat 55878
>gb|AY124873.1| Arabidopsis thaliana At1g65960/F12P19_12 mRNA, complete cds Length = 1485 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1244 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 1185 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 1184 cgtagcatctcagagatctcgaactcgt 1157
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 agaaggccaccagcgggacgccctggtc 590 ||||||| ||||||| |||||||||||| Sbjct: 3085206 agaaggcgaccagcgcgacgccctggtc 3085233
>ref|NM_139636.2| Drosophila melanogaster Cip4 CG15015-RA (Cip4), mRNA Length = 2539 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 cggacaccacctcgcgctgcctcgccag 293 ||||||||||||||||||| | |||||| Sbjct: 478 cggacaccacctcgcgctgtcccgccag 451
>gb|AY081259.1| Arabidopsis thaliana glutamate decarboxylase, putative (At1g65960) mRNA, complete cds Length = 1650 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1275 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 1216 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 1215 cgtagcatctcagagatctcgaactcgt 1188
>gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, complete sequence Length = 219227 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tttgtgcacaaatatgccaa 37 |||||||||||||||||||| Sbjct: 77405 tttgtgcacaaatatgccaa 77424
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 cgatgacgaggcgctcggcg 411 |||||||||||||||||||| Sbjct: 51142 cgatgacgaggcgctcggcg 51161
>gb|AF428372.1|AF428372 Arabidopsis thaliana At1g65960/F12P19_12 mRNA, complete cds Length = 1695 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1276 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 1217 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 1216 cgtagcatctcagagatctcgaactcgt 1189
>gb|AC153553.4| Mus musculus 10 BAC RP23-329D17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185583 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 atgtttgtgcacaaatatgc 34 |||||||||||||||||||| Sbjct: 126939 atgtttgtgcacaaatatgc 126958
>dbj|AK222219.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-29-A09 Length = 1410 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1009 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 950 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 949 cgtagcatctcagagatctcgaactcgt 922
>dbj|AK222191.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-19-P03 Length = 1309 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 908 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 849 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 848 cgtagcatctcagagatctcgaactcgt 821
>ref|XM_626182.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_2450), partial mRNA Length = 3480 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 acaaatatgccaagtacttt 44 |||||||||||||||||||| Sbjct: 1970 acaaatatgccaagtacttt 1989
>dbj|AK037855.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130056G21 product:hypothetical protein, full insert sequence Length = 2737 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tagatgtttgtgcacaaata 31 |||||||||||||||||||| Sbjct: 467 tagatgtttgtgcacaaata 486
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccttctcgatgtcgatgacg 399 |||||||||||||||||||| Sbjct: 868497 ccttctcgatgtcgatgacg 868478
>emb|BX813398.1|CNS0AC29 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1207 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 aaattattacggaaataaaa 174 |||||||||||||||||||| Sbjct: 596 aaattattacggaaataaaa 615
>emb|BX815697.1|CNS0AAMK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZD05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 787 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 400 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 341 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 340 cgtagcatctcagagatctcgaactcgt 313
>emb|BX841928.1|CNS09Y4F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1146 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 aaattattacggaaataaaa 174 |||||||||||||||||||| Sbjct: 596 aaattattacggaaataaaa 615
>gb|AC138058.2| Homo sapiens chromosome 3 clone RP11-298C2, complete sequence Length = 154123 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tttgtgcacaaatatgccaa 37 |||||||||||||||||||| Sbjct: 152014 tttgtgcacaaatatgccaa 152033
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 cccggacgacgacgcggagc 450 |||||||||||||||||||| Sbjct: 2085884 cccggacgacgacgcggagc 2085865
>gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BAC F25P12 genomic sequence, complete sequence Length = 141748 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aaattattacggaaataaaa 174 |||||||||||||||||||| Sbjct: 74065 aaattattacggaaataaaa 74046
>dbj|BS000178.1| Pan troglodytes chromosome 22 clone:RP43-042C06, map 22, complete sequences Length = 176580 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 gttctcctggcagttgtcca 667 |||||||||||||||||||| Sbjct: 122353 gttctcctggcagttgtcca 122372
>dbj|BS000179.1| Pan troglodytes chromosome 22 clone:RP43-082J09, map 22, complete sequences Length = 184352 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 gttctcctggcagttgtcca 667 |||||||||||||||||||| Sbjct: 1685 gttctcctggcagttgtcca 1704
>gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 81490 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 62373 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 62314 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 62313 cgtagcatctcagagatctcgaactcgt 62286
>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216161 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cttccagacggacaccacct 277 |||||||||||||||||||| Sbjct: 82374 cttccagacggacaccacct 82393
>gb|AE003481.3| Drosophila melanogaster chromosome 3L, section 15 of 83 of the complete sequence Length = 315988 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 266 cggacaccacctcgcgctgcctcgccag 293 ||||||||||||||||||| | |||||| Sbjct: 20090 cggacaccacctcgcgctgtcccgccag 20117
>dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, section 51/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 gttctcctggcagttgtcca 667 |||||||||||||||||||| Sbjct: 306155 gttctcctggcagttgtcca 306174
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aaattattacggaaataaaa 174 |||||||||||||||||||| Sbjct: 1279630 aaattattacggaaataaaa 1279611 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cggcccgctgctgcgcgagg 355 |||||||||||||||||||| Sbjct: 719249 cggcccgctgctgcgcgagg 719268
>gb|U46665.1|ATU46665 Arabidopsis thaliana glutamate decarboxylase 2 (GAD2) mRNA, complete cds Length = 1676 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1260 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 1201 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 1200 cgtagcatctcagagatctcgaactcgt 1173
>gb|U49937.1|ATU49937 Arabidopsis thaliana glutamate decarboxylase (GAD2) mRNA, complete cds Length = 1681 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 451 accgtgacgtgctgcgcgtcggggggcatggtgtaggccggcacgatccacccgaagcgg 510 ||||||| |||||| || |||| ||||| ||||| || || |||||||| || || || Sbjct: 1244 accgtgatgtgctgtgcatcggcaggcatagtgtaagctgggacgatccagccaaaacga 1185 Query: 511 cgcaggaactcggagatctcgaactcgt 538 || || | ||| |||||||||||||||| Sbjct: 1184 cgtagcatctcagagatctcgaactcgt 1157
>dbj|AP000885.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B680H4, SOD-AML region, complete sequence Length = 86719 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 gttctcctggcagttgtcca 667 |||||||||||||||||||| Sbjct: 13622 gttctcctggcagttgtcca 13641 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,910,525 Number of Sequences: 3902068 Number of extensions: 4910525 Number of successful extensions: 101629 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 100378 Number of HSP's gapped (non-prelim): 1229 length of query: 685 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 662 effective length of database: 17,143,297,704 effective search space: 11348863080048 effective search space used: 11348863080048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
