>YP83_CAEEL (Q09441) Hypothetical protein C08B11.3 in chromosome II|
          Length = 1244

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = -1

Query: 484 KSQRKSLPK----LPSEQTGSVDIATSISSAEQLEISNSTADPILTPIRAQVTPDDHVIN 317
           +SQ +S+PK    +  E+T  V++ + I + E+  I+N T +    PI+A    D++  N
Sbjct: 761 ESQEQSVPKKQNDINGEETDEVELNSKIVTPEKKSITNGTVEVCQEPIQASKLFDENYAN 820

Query: 316 E 314
           +
Sbjct: 821 Q 821

>PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease)|
          Length = 502

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 471 FRWDFLGAGVVLALFWEALWSRLRRTGRLEGLVLTVVTAEV 593
           + W   GA     + +  +WSR+ R G L G+++  VT  V
Sbjct: 403 YAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGAVTVIV 443

>FA44A_HUMAN (Q8NFC6) Protein FAM44A|
          Length = 502

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 538 SLDQRASQNSAKTTPAPKKSQRKSLPKLPSEQTGSVDIATSISSAEQLEISNSTAD 371
           SL+Q AS   A T  +  K+  ++  KLPS+ T         +S +  +   STAD
Sbjct: 210 SLNQEASAARASTETSNAKTSERASKKLPSQPTTDTSTDKERTSEDMADKEKSTAD 265

>K0319_HUMAN (Q5VV43) Protein KIAA0319 precursor|
          Length = 1072

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 514 NSAKTTPAPKKSQRKSLPKLPSEQTGSVDIATSISSAEQLEISNSTADPILTP 356
           N + +TPAPK  +R  L  LP+  +    +    +S  Q + SNS+   +L P
Sbjct: 219 NESASTPAPKLPERSVLLPLPTTPSSGEVLEKEKASQLQEQSSNSSGKEVLMP 271

>PDE3A_HUMAN (Q14432) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A)
           (CGI-PDE A)
          Length = 1141

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
 Frame = +3

Query: 351 RIGVRMGSAVELLISSCSAED-IEVAMSTEPVCSDGNLGRDFRWDFLGAGVVLALFWEAL 527
           R GVR+  AV LL + C  E  +++ +          +G D       AGVVL+    A 
Sbjct: 152 RAGVRLPLAVALLAACCGGEALVQIGLG---------VGEDHLLSLPAAGVVLSCLAAAT 202

Query: 528 W--SRLRRTGRLEGLVLTVVTAEVVFFER 608
           W   RLR    +  L   V T  ++  ER
Sbjct: 203 WLVLRLRLGVLMIALTSAVRTVSLISLER 231

>PUTP_ECOLI (P07117) Sodium/proline symporter (Proline permease)|
          Length = 502

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 471 FRWDFLGAGVVLALFWEALWSRLRRTGRLEGLVLTVVTAEV 593
           + W   GA     + +  +WSR+ R G L G+++  +T  V
Sbjct: 403 YAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIV 443

>BAIH_EUBSP (P32370) NADH-dependent flavin oxidoreductase (EC 1.-.-.-)|
          Length = 661

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 525 GPPKTAPRQHLLPRSPNGNLSPNCHQSR 442
           GP      +H+ P  P+ N + NCH SR
Sbjct: 109 GPESVCGYRHIAPLGPSANTNANCHVSR 136

>GATB_COREF (Q8FPY5) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 501

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 475 RKSLPKLPSEQTGSVDIATSISSAEQLEISNSTA-DPILTPIRAQVTPDD 329
           R +LP+LP  +   +     +S AE  ++ N+ A D I+  + A  TPD+
Sbjct: 318 RATLPELPWVRRARIQEEWKLSDAEMRDLVNANALDLIIETVEAGTTPDE 367

>YN84_CAEEL (Q03613) Probable G-protein coupled receptor ZC84.4|
          Length = 395

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 209 VLELV*SPGVWNMASSQCTVYLLSCVVFKQYKGVVLFVASNICI*LPCISRSQ 51
           V+ELV   G W  +S  CT YL+   + K    +++F+ S  C    C+ +++
Sbjct: 88  VIELVF--GTWQFSSMVCTSYLIFDSMNKFMAPMIVFLISRTCYSTVCLDKTR 138

>GATB_CORGL (Q8NR05) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 493

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 475 RKSLPKLPSEQTGSVDIATSISSAEQLEISNSTA-DPILTPIRAQVTPDD 329
           R +LP+LP  +   +     +S AE  ++ N+ A D I+  + A  TPD+
Sbjct: 310 RATLPELPWVRRARIQEEWKLSDAEMRDLINANALDLIIETVEAGTTPDE 359


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,675,410
Number of Sequences: 219361
Number of extensions: 1846061
Number of successful extensions: 4541
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4540
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)