>gb|AC169505.1| Mus musculus BAC clone RP24-257J8 from chromosome 16, complete sequence
          Length = 138498

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   acaggaaatcatcaagaaata 258
             |||||||||||||||||||||
Sbjct: 35959 acaggaaatcatcaagaaata 35939

>gb|AC154093.1| Homo sapiens chromosome 13 clone fa0790, complete sequence
          Length = 37001

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    gcacatgtacatatgcacagccaa 63
             ||||||||||||||||||| ||||
Sbjct: 36289 gcacatgtacatatgcacacccaa 36312

>gb|AC146418.3| Pan troglodytes BAC clone RP43-30C17 from 7, complete sequence
          Length = 173505

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    tagtcttcaagaaggatcaa 311
              ||||||||||||||||||||
Sbjct: 135865 tagtcttcaagaaggatcaa 135884

>gb|AC004159.1| Homo sapiens PAC clone RP5-1057M1 from 7, complete sequence
          Length = 106039

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   tagtcttcaagaaggatcaa 311
             ||||||||||||||||||||
Sbjct: 81344 tagtcttcaagaaggatcaa 81363

>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2
              novel genes, complete sequence
          Length = 144792

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     gcacatgtacatatgcacagccaa 63
              ||||||||||||||||||| ||||
Sbjct: 109730 gcacatgtacatatgcacacccaa 109707

>emb|AL845496.5| Mouse DNA sequence from clone RP23-245J21 on chromosome 4 Contains part
             of the Ptprd gene for receptor type protein tyrosine
             phosphatase D, complete sequence
          Length = 187964

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    cacatgtacatatgcacagc 60
             ||||||||||||||||||||
Sbjct: 39348 cacatgtacatatgcacagc 39329

>gb|AC112911.3| Homo sapiens 3 BAC RP11-694D5 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 101467

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  caggaaatcatcaagaaata 258
            ||||||||||||||||||||
Sbjct: 4951 caggaaatcatcaagaaata 4932

>gb|AC174300.4| Medicago truncatula clone mth2-84c16, complete sequence
          Length = 139426

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 115    tacacaacacaaccgagcccaacatcct 142
              |||||||||||||  |||||||||||||
Sbjct: 130902 tacacaacacaacacagcccaacatcct 130929

>gb|AC148755.6| Medicago truncatula clone mth2-24n16, complete sequence
          Length = 119876

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 115   tacacaacacaaccgagcccaacatcct 142
             |||||||||||||  |||||||||||||
Sbjct: 61672 tacacaacacaacacagcccaacatcct 61699

>gb|AF233632.1|AF233632 Xenopus laevis calcium/calmodulin-dependent protein kinase II gamma L
            subunit mRNA, complete cds
          Length = 3701

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  caaacaggaaatcatcaaga 254
            ||||||||||||||||||||
Sbjct: 1646 caaacaggaaatcatcaaga 1665

>gb|AC079298.8| Homo sapiens BAC clone RP11-9N12 from 4, complete sequence
          Length = 200822

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    cacatgtacatatgcacagc 60
             ||||||||||||||||||||
Sbjct: 28046 cacatgtacatatgcacagc 28065

>gb|AC084475.1|CBRG01C7 Caenorhabditis briggsae cosmid G01C7, complete sequence
          Length = 39419

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  gtccaaaaactgtacacaac 122
            ||||||||||||||||||||
Sbjct: 2331 gtccaaaaactgtacacaac 2312

>dbj|AK174985.1| Ciona intestinalis cDNA, clone:citb091c07, full insert sequence
          Length = 595

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 tatgtctaacaatagcatgctttg 194
           ||||| ||||||||||||||||||
Sbjct: 355 tatgtttaacaatagcatgctttg 332

>dbj|AK174434.1| Ciona intestinalis cDNA, clone:cicl100a09, full insert sequence
          Length = 1295

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 tatgtctaacaatagcatgctttg 194
           ||||| ||||||||||||||||||
Sbjct: 218 tatgtttaacaatagcatgctttg 195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,851,784
Number of Sequences: 3902068
Number of extensions: 2851784
Number of successful extensions: 51934
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51917
Number of HSP's gapped (non-prelim): 17
length of query: 386
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 364
effective length of database: 17,147,199,772
effective search space: 6241580717008
effective search space used: 6241580717008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)