| Clone Name | rbags35c05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L08, full insert sequence Length = 2303 Score = 454 bits (229), Expect = e-124 Identities = 388/440 (88%), Gaps = 2/440 (0%) Strand = Plus / Minus Query: 254 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 313 ||||| |||||||||||||| || || |||||||| || ||||| || |||||||||||| Sbjct: 2014 tatttggaccatgcaaccgcatcaatttctgcttgagcactccgatatagctccagcctc 1955 Query: 314 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 373 || ||||| || |||||||| |||||||| |||||||| || || || ||||| |||||| Sbjct: 1954 ttcgcaagattagtcctccgttccatgacggcggggtcttcatcaagaagcttagaaagt 1895 Query: 374 tgcctaatctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcc 433 || |||||||||||||||||| ||||||||||| || ||||||| ||||||||||||| Sbjct: 1894 tgtttaatctctcttgctcccaattcagtaaagaagtgatcgagcagtgagcgctttgcc 1835 Query: 434 tcacggacttggcagtacacaatagattttgggatggagttcctcaatgttgaagatacc 493 || || ||||| ||||| ||||||||||| || || ||||||||||| |||||| ||||| Sbjct: 1834 tcccgcacttgacagtagacaatagatttcggaatagagttcctcaaggttgaacatacc 1775 Query: 494 atgttaacatatgccagaacagttgtcccaattcgtcttagataagaatcattatatctg 553 ||||||| |||||||||||| ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 1774 atgttaatatatgccagaaccgttgttccaattcgtctaagataagaatcat--tatcta 1717 Query: 554 tcgaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 613 || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1716 tcaaaaatagagtggcttggatttccacccttctcaacatcctggggaagtttcctgaag 1657 Query: 614 aaatctacagttaagtagcttgtttccatatcaactagctttaatgtgttcttcttgctt 673 |||||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||| Sbjct: 1656 aaatctacggttaagtagctgcattccatatcaacaagctttaatgtgtttttcttgctt 1597 Query: 674 tcgtccctcattctttccaa 693 || ||||||||||| ||||| Sbjct: 1596 tcatccctcattctgtccaa 1577 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 63 tcctcaagcacaaggagcaaaagcacaaac 92 |||||||||||||||| ||||||||||||| Sbjct: 2183 tcctcaagcacaaggaacaaaagcacaaac 2154
>gb|AY104344.1| Zea mays PCO082748 mRNA sequence Length = 1812 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 254 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 313 ||||| |||||||| || || ||||| || | |||||| ||||||||||||||||||||| Sbjct: 1557 tatttggaccatgcgactgcatcgatttccgattgggcactccggtacagctccagcctc 1498 Query: 314 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 373 || |||||||| || || || |||||||| || || || |||||||| |||||||||||| Sbjct: 1497 tttgcaaggttagttctgcgttccatgactgctggatcttcgtcgagaagcttggaaagt 1438 Query: 374 tgcctaatctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcc 433 ||| | ||||||||||||||||| ||||| ||||| || ||||||| |||||||| ||| Sbjct: 1437 tgcttcatctctcttgctcccagttcagtgaagaagtgatcgagcagcgagcgcttggcc 1378 Query: 434 tcacggacttggcagtacacaatagattttgggatggagttcctcaatgttgaagatacc 493 || || |||||||| || ||||||||||||||||||||||||||||| || ||| | ||| Sbjct: 1377 tctcgcacttggcaataaacaatagattttgggatggagttcctcaaggtcgaacacacc 1318 Query: 494 atgttaacatatgccagaacagttgtcccaattcgtcttagataagaatcattatatctg 553 || |||||||||| |||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 1317 atattaacatatgacagaacagtttgtccaattcgtctaagataagagtcattatatcta 1258 Query: 554 tcgaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 613 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1257 tcaaaaatagagtggcttggatttccacccctctcaacatcctgaggaagcttcctgaag 1198 Query: 614 aaatctacagttaagtagcttgtttccatatcaactagctttaatgtgttcttcttgctt 673 |||||||| || |||||||| |||||| ||||||||||||||||| || ||||||||| Sbjct: 1197 aaatctactgtcaagtagctgcattccatgtcaactagctttaatgtatttttcttgctt 1138 Query: 674 tcgtccctcattctttccaa 693 || ||||||||||| ||||| Sbjct: 1137 tcatccctcattctatccaa 1118
>gb|BT017132.1| Zea mays clone EL01N0365G02.c mRNA sequence Length = 1266 Score = 389 bits (196), Expect = e-105 Identities = 379/440 (86%) Strand = Plus / Minus Query: 254 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 313 ||||| ||||||||||| || || || || | |||||| |||||||||||||| |||||| Sbjct: 1029 tatttggaccatgcaacggcatcaatttcggattgggcactccggtacagctcgagcctc 970 Query: 314 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 373 || |||||||| || || || |||||||| || ||||| ||||| || || |||||||| Sbjct: 969 tttgcaaggttagttctgcgttccatgactgctgggtcttcgtcaagaagtttggaaagc 910 Query: 374 tgcctaatctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcc 433 ||| | |||||||||||||| || ||||| ||||| || ||||||| |||||||| | Sbjct: 909 tgcttcatctctcttgctccaagttcagtgaagaagtgatcgagcagcgagcgcttgcct 850 Query: 434 tcacggacttggcagtacacaatagattttgggatggagttcctcaatgttgaagatacc 493 || || ||||| || || ||||||||||||||||||||||||||||| || ||| | ||| Sbjct: 849 tctcgcacttgacaataaacaatagattttgggatggagttcctcaaggtcgaacacacc 790 Query: 494 atgttaacatatgccagaacagttgtcccaattcgtcttagataagaatcattatatctg 553 || |||||||||| |||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 789 atattaacatatgacagaacagtttgtccaattcgtctaagataagagtcattatatcta 730 Query: 554 tcgaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 613 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 tcaaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 670 Query: 614 aaatctacagttaagtagcttgtttccatatcaactagctttaatgtgttcttcttgctt 673 |||||||| || |||||||| |||||| ||||||||||||||||| || ||||||||| Sbjct: 669 aaatctactgtcaagtagctgcattccatgtcaactagctttaatgtatttttcttgctt 610 Query: 674 tcgtccctcattctttccaa 693 || ||||||||||| ||||| Sbjct: 609 tcatccctcattctatccaa 590
>ref|NM_192052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1935 Score = 293 bits (148), Expect = 4e-76 Identities = 328/388 (84%) Strand = Plus / Minus Query: 267 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 326 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 1921 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 1862 Query: 327 tcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagttgcctaatctctc 386 || |||||||| ||||||||||| || || || ||||| |||| ||| | ||||||| Sbjct: 1861 ctctacgctccatcaccgcggggtcttcatcaagaagcttagaaatgtgcttgatctctc 1802 Query: 387 ttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggacttggc 446 ||||||||| || |||||||| | |||||||||| |||||||||||| |||||||||| Sbjct: 1801 ttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggacttggc 1742 Query: 447 agtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaacatatg 506 | || ||||||||||| ||||||||||| ||||| ||||| ||||||| || ||||||| Sbjct: 1741 aataaacaatagatttagggatggagtttctcaagcttgaacataccatattgacatatg 1682 Query: 507 ccagaacagttgtcccaattcgtcttagataagaatcattatatctgtcgaaaatagagt 566 |||||||| | || | ||||||||| || || |||||||| |||||||| |||||||||| Sbjct: 1681 ccagaacattagtactaattcgtctaaggtatgaatcattgtatctgtcaaaaatagagt 1622 Query: 567 ggcttggatttccacccttctcaacatcctgaggaagcttcctgaagaaatctacagtta 626 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1621 ttgttggatttccacccttctcaacatcctgaggaagcttccaaaagaaatcaacagtta 1562 Query: 627 agtagcttgtttccatatcaactagctt 654 | ||||| ||||||||||| ||||| Sbjct: 1561 aatagctgcactccatatcaaccagctt 1534
>dbj|AK072230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D21, full insert sequence Length = 2691 Score = 293 bits (148), Expect = 4e-76 Identities = 328/388 (84%) Strand = Plus / Minus Query: 267 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 326 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 2523 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 2464 Query: 327 tcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagttgcctaatctctc 386 || |||||||| ||||||||||| || || || ||||| |||| ||| | ||||||| Sbjct: 2463 ctctacgctccatcaccgcggggtcttcatcaagaagcttagaaatgtgcttgatctctc 2404 Query: 387 ttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggacttggc 446 ||||||||| || |||||||| | |||||||||| |||||||||||| |||||||||| Sbjct: 2403 ttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggacttggc 2344 Query: 447 agtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaacatatg 506 | || ||||||||||| ||||||||||| ||||| ||||| ||||||| || ||||||| Sbjct: 2343 aataaacaatagatttagggatggagtttctcaagcttgaacataccatattgacatatg 2284 Query: 507 ccagaacagttgtcccaattcgtcttagataagaatcattatatctgtcgaaaatagagt 566 |||||||| | || | ||||||||| || || |||||||| |||||||| |||||||||| Sbjct: 2283 ccagaacattagtactaattcgtctaaggtatgaatcattgtatctgtcaaaaatagagt 2224 Query: 567 ggcttggatttccacccttctcaacatcctgaggaagcttcctgaagaaatctacagtta 626 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2223 ttgttggatttccacccttctcaacatcctgaggaagcttccaaaagaaatcaacagtta 2164 Query: 627 agtagcttgtttccatatcaactagctt 654 | ||||| ||||||||||| ||||| Sbjct: 2163 aatagctgcactccatatcaaccagctt 2136
>ref|XM_475890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 240 bits (121), Expect = 5e-60 Identities = 160/173 (92%) Strand = Plus / Minus Query: 521 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 580 ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 1562 ccaattcgtctaagataagaatcattatatctatcaaaaatagagtggcttggatttcca 1503 Query: 581 cccttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttcc 640 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 1502 cccttctcaacatcctggggaagtttcctgaagaaatctacggttaagtagctgcattcc 1443 Query: 641 atatcaactagctttaatgtgttcttcttgctttcgtccctcattctttccaa 693 |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1442 atatcaacaagctttaatgtgtttttcttgctttcatccctcattctgtccaa 1390
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 240 bits (121), Expect = 5e-60 Identities = 160/173 (92%) Strand = Plus / Plus Query: 521 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 580 ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 24827 ccaattcgtctaagataagaatcattatatctatcaaaaatagagtggcttggatttcca 24886 Query: 581 cccttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttcc 640 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 24887 cccttctcaacatcctggggaagtttcctgaagaaatctacggttaagtagctgcattcc 24946 Query: 641 atatcaactagctttaatgtgttcttcttgctttcgtccctcattctttccaa 693 |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 24947 atatcaacaagctttaatgtgtttttcttgctttcatccctcattctgtccaa 24999 Score = 147 bits (74), Expect = 6e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 382 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 441 |||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || || Sbjct: 24451 ctctcttgctcccaattcagtaaagaagtgatcgagcagtgagcgctttgcctcccgcac 24510 Query: 442 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 501 ||| ||||| ||||||||||| || || ||||||||||| |||||| |||||||||||| Sbjct: 24511 ttgacagtagacaatagatttcggaatagagttcctcaaggttgaacataccatgttaat 24570 Query: 502 atatgccagaacagttgt 519 |||||||||||| ||||| Sbjct: 24571 atatgccagaaccgttgt 24588 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 254 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 313 ||||| |||||||||||||| || || |||||||| || ||||| || |||||||||||| Sbjct: 24187 tatttggaccatgcaaccgcatcaatttctgcttgagcactccgatatagctccagcctc 24246 Query: 314 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 373 || ||||| || |||||||| |||||||| |||||||| || || || ||||| |||||| Sbjct: 24247 ttcgcaagattagtcctccgttccatgacggcggggtcttcatcaagaagcttagaaagt 24306 Query: 374 tg 375 || Sbjct: 24307 tg 24308 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 63 tcctcaagcacaaggagcaaaagcacaaac 92 |||||||||||||||| ||||||||||||| Sbjct: 24018 tcctcaagcacaaggaacaaaagcacaaac 24047
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 240 bits (121), Expect = 5e-60 Identities = 160/173 (92%) Strand = Plus / Plus Query: 521 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 580 ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 27428697 ccaattcgtctaagataagaatcattatatctatcaaaaatagagtggcttggatttcca 27428756 Query: 581 cccttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttcc 640 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 27428757 cccttctcaacatcctggggaagtttcctgaagaaatctacggttaagtagctgcattcc 27428816 Query: 641 atatcaactagctttaatgtgttcttcttgctttcgtccctcattctttccaa 693 |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 27428817 atatcaacaagctttaatgtgtttttcttgctttcatccctcattctgtccaa 27428869 Score = 147 bits (74), Expect = 6e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 382 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 441 |||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || || Sbjct: 27428321 ctctcttgctcccaattcagtaaagaagtgatcgagcagtgagcgctttgcctcccgcac 27428380 Query: 442 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 501 ||| ||||| ||||||||||| || || ||||||||||| |||||| |||||||||||| Sbjct: 27428381 ttgacagtagacaatagatttcggaatagagttcctcaaggttgaacataccatgttaat 27428440 Query: 502 atatgccagaacagttgt 519 |||||||||||| ||||| Sbjct: 27428441 atatgccagaaccgttgt 27428458 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 254 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 313 ||||| |||||||||||||| || || |||||||| || ||||| || |||||||||||| Sbjct: 27428057 tatttggaccatgcaaccgcatcaatttctgcttgagcactccgatatagctccagcctc 27428116 Query: 314 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 373 || ||||| || |||||||| |||||||| |||||||| || || || ||||| |||||| Sbjct: 27428117 ttcgcaagattagtcctccgttccatgacggcggggtcttcatcaagaagcttagaaagt 27428176 Query: 374 tg 375 || Sbjct: 27428177 tg 27428178 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 63 tcctcaagcacaaggagcaaaagcacaaac 92 |||||||||||||||| ||||||||||||| Sbjct: 27427888 tcctcaagcacaaggaacaaaagcacaaac 27427917
>gb|AY463019.1| Musa acuminata putative phragmoplastin 5 mRNA, partial cds Length = 509 Score = 153 bits (77), Expect = 9e-34 Identities = 149/173 (86%) Strand = Plus / Minus Query: 392 cccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggacttggcagtac 451 |||| ||||||||||||||| || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 193 cccaactcagtaaagaaatgatcaagcaaggagcgtttagcctctcgcacttgacagtaa 134 Query: 452 acaatagattttgggatggagttcctcaatgttgaagataccatgttaacatatgccaga 511 |||||||| |||||||||||||||| ||| ||||| |||||||||| |||||||||||| Sbjct: 133 acaatagactttgggatggagttccgcaagcttgaacataccatgttgacatatgccaga 74 Query: 512 acagttgtcccaattcgtcttagataagaatcattatatctgtcgaaaataga 564 |||||||| || || ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 73 acagttgttcctatacgtctgagataagagtcattgtatctatcaaaaataga 21
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 382 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 441 |||||||||||||| || |||||||| | |||||||||| |||||||||||| ||||| Sbjct: 28053097 ctctcttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggac 28053038 Query: 442 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 501 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||||| || || Sbjct: 28053037 ttggcaataaacaatagatttagggatggagtttctcaagcttgaacataccatattgac 28052978 Query: 502 atatgccagaaca 514 ||||||||||||| Sbjct: 28052977 atatgccagaaca 28052965 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 523 aattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccacc 582 ||||||||| || || |||||||| |||||||| |||||||||| ||||||||||||| Sbjct: 28052734 aattcgtctaaggtatgaatcattgtatctgtcaaaaatagagtttgttggatttccacc 28052675 Query: 583 cttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttccat 642 |||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 28052674 cttctcaacatcctgaggaagcttccaaaagaaatcaacagttaaatagctgcactccat 28052615 Query: 643 atcaactagctt 654 |||||| ||||| Sbjct: 28052614 atcaaccagctt 28052603 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 267 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 326 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 28053685 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 28053626 Query: 327 tcctccgctccatgaccgcggggtc 351 || |||||||| ||||||||||| Sbjct: 28053625 ctctacgctccatcaccgcggggtc 28053601
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 382 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 441 |||||||||||||| || |||||||| | |||||||||| |||||||||||| ||||| Sbjct: 68296 ctctcttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggac 68237 Query: 442 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 501 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||||| || || Sbjct: 68236 ttggcaataaacaatagatttagggatggagtttctcaagcttgaacataccatattgac 68177 Query: 502 atatgccagaaca 514 ||||||||||||| Sbjct: 68176 atatgccagaaca 68164 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 523 aattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccacc 582 ||||||||| || || |||||||| |||||||| |||||||||| ||||||||||||| Sbjct: 67933 aattcgtctaaggtatgaatcattgtatctgtcaaaaatagagtttgttggatttccacc 67874 Query: 583 cttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttccat 642 |||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 67873 cttctcaacatcctgaggaagcttccaaaagaaatcaacagttaaatagctgcactccat 67814 Query: 643 atcaactagctt 654 |||||| ||||| Sbjct: 67813 atcaaccagctt 67802 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 267 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 326 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 68884 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 68825 Query: 327 tcctccgctccatgaccgcggggtc 351 || |||||||| ||||||||||| Sbjct: 68824 ctctacgctccatcaccgcggggtc 68800
>gb|U36430.1|GMU36430 Glycine max dynamin-like protein SDL5A mRNA, complete cds Length = 2134 Score = 87.7 bits (44), Expect = 5e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 521 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 580 |||||||| |||||||| |||||||||||||| || ||||| || || | ||||| ||| Sbjct: 1691 ccaattcgccttagatatgaatcattatatctatcaaaaattgaatgtgtgggattgcca 1632 Query: 581 cccttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 ||||| |||||||| ||||||||||||| |||||||| ||||| Sbjct: 1631 cccttatcaacatcttgaggaagcttccgaaagaaatcaacagt 1588
>ref|NM_180789.1| Arabidopsis thaliana ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding AT5G42080 (ADL1) transcript variant AT5G42080.1 mRNA, complete cds Length = 2427 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 524 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 583 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1779 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1720 Query: 584 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1719 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1679
>gb|BT001063.1| Arabidopsis thaliana At5g42080/MJC20_19 mRNA, complete cds Length = 1833 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 524 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 583 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1562 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1503 Query: 584 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1502 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1462
>gb|AY094408.1| Arabidopsis thaliana AT5g42080/MJC20_19 mRNA, complete cds Length = 2269 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 524 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 583 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1779 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1720 Query: 584 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1719 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1679
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 524 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 583 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 43323 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 43382 Query: 584 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 43383 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 43423
>gb|L36939.1|ATHDYNAGTP Arabidopsis thaliana dynamin-like GTP binding protein mRNA, complete cds Length = 2160 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 524 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 583 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1659 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1600 Query: 584 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1599 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1559
>gb|L38614.1|ATHGTPBPA Arabidopsis thaliana GTP-binding protein mRNA, complete cds Length = 2234 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 524 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 583 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1768 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1709 Query: 584 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1708 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1668
>emb|AJ244024.1|NTA244024 Nicotiana tabacum mRNA for phragmoplastin, dynamin-like protein Length = 2193 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 533 agataagaatcattatatctgtcgaaaatagagtggcttggatttccacccttctcaaca 592 ||||| ||||||||||| | ||| ||||| || || |||||||||| |||||||||| | Sbjct: 1663 agataggaatcattataccggtcaaaaattgaatgtgttggatttcctcccttctcaata 1604 Query: 593 tcctgaggaagcttcctgaagaaatctacagt 624 || |||||||| |||| ||||||||||||||| Sbjct: 1603 tcttgaggaagtttccggaagaaatctacagt 1572
>gb|U25547.1|GMU25547 Glycine max dynamin-like protein SDL12A mRNA, complete cds Length = 2211 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Minus Query: 521 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 580 |||||||| |||||||| |||||||||||||| || |||| || || | ||||| ||| Sbjct: 1739 ccaattcgccttagatatgaatcattatatctatcacaaattgaatgtgtgggattgcca 1680 Query: 581 cccttctcaacatcctgaggaagcttcctgaagaaatctacagt 624 ||||| |||||||| ||||||||||||| |||||||| ||||| Sbjct: 1679 cccttatcaacatcttgaggaagcttccgaaagaaatcaacagt 1636
>dbj|AP004493.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025b, complete sequence Length = 36100 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 521 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 580 |||||||| |||||||| |||||||||||||| || ||||| || || | ||||| ||| Sbjct: 33445 ccaattcgccttagatatgaatcattatatctatcaaaaattgaatgtgtgggattgcca 33386 Query: 581 cccttctcaacatcctgaggaagcttcctgaagaaatc 618 ||||| || ||||| ||||||||||||| |||||||| Sbjct: 33385 cccttatctacatcttgaggaagcttccgaaagaaatc 33348
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 521 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 580 |||||||| || ||||| |||||||||||||| || ||||| || || | ||||| ||| Sbjct: 27065 ccaattcgcctaagatatgaatcattatatctatcaaaaattgaatgtgtaggattgcca 27124 Query: 581 cccttctcaacatcctgaggaag 603 ||||| || ||||| |||||||| Sbjct: 27125 cccttgtctacatcttgaggaag 27147
>ref|NM_116041.2| Arabidopsis thaliana GTP binding / GTPase AT3G61760 mRNA, complete cds Length = 1926 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 428 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 480 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 1719 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 1667
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 428 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 480 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 23492 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 23544
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 428 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 480 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 72180 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 72232
>gb|AY189279.1| Arabidopsis thaliana dynamin-like protein B mRNA, complete cds Length = 1926 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 428 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 480 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 1719 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 1667
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 138629 ccgcgtggtcctcgtcgaggagct 138652
>ref|XM_510247.1| PREDICTED: Pan troglodytes LOC453257 (LOC453257), mRNA Length = 4481 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ggtacagctccagcctcttg 316 |||||||||||||||||||| Sbjct: 3079 ggtacagctccagcctcttg 3060
>ref|XM_520335.1| PREDICTED: Pan troglodytes similar to General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63) (LOC464820), mRNA Length = 2528 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 512 gtacagctccagcctcttgg 493
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 agcaaaagcacaaacacatg 97 |||||||||||||||||||| Sbjct: 1093704 agcaaaagcacaaacacatg 1093685
>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 agcaaaagcacaaacacatg 97 |||||||||||||||||||| Sbjct: 53873 agcaaaagcacaaacacatg 53892
>gb|AY694189.1| Camellia sinensis phragmoplastin mRNA, partial cds Length = 434 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcagtaaagaaatggtcgag 417 |||||||||||||||||||| Sbjct: 77 tcagtaaagaaatggtcgag 58
>gb|AY881693.1| Baboon herpesvirus 2 strain 860 ICP22 (US1), US2 (US2), protein kinase (US3), glycoprotein G (US4), glycoprotein J (US5), glycoprotein D (US6), glycoprotein I (US7), glycoprotein E (US8), US8.5 (US8.5), US9 (US9), US10 (US10), tegument protein (US11), and ICP47 (US12) genes, complete cds Length = 15072 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 9097 ccgcgtggtcctcgtcgaggagct 9120
>gb|BC017337.2| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone MGC:29524 IMAGE:4872395), complete cds Length = 2397 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 449 gtacagctccagcctcttgg 430
>ref|NM_004667.3| Homo sapiens hect domain and RLD 2 (HERC2), mRNA Length = 15351 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ggtacagctccagcctcttg 316 |||||||||||||||||||| Sbjct: 3582 ggtacagctccagcctcttg 3563
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gaccatgcaaccgcgtcgat 279 |||||||||||||||||||| Sbjct: 3342464 gaccatgcaaccgcgtcgat 3342483
>ref|NM_012087.1| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa (GTF3C5), mRNA Length = 2385 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 481 gtacagctccagcctcttgg 462
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gaccatgcaaccgcgtcgat 279 |||||||||||||||||||| Sbjct: 2784198 gaccatgcaaccgcgtcgat 2784179
>gb|BC011355.1| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone MGC:18246 IMAGE:4157684), complete cds Length = 2388 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 470 gtacagctccagcctcttgg 451
>gb|L14730.1| Caenorhabditis elegans cosmid C13G5, complete sequence Length = 10883 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtacagcagaaaggtgtccc 44 |||||||||||||||||||| Sbjct: 5608 gtacagcagaaaggtgtccc 5589
>gb|BC030157.2| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone IMAGE:4561538), partial cds Length = 2099 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 184 gtacagctccagcctcttgg 165
>emb|BX936390.7| Zebrafish DNA sequence from clone DKEY-6E2 in linkage group 6, complete sequence Length = 168226 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 41707 aacatatgccagaacagttg 41726
>emb|AL732366.7| Human DNA sequence from clone RP11-393H10 on chromosome X Contains a novel gene (FLJ14503), the EIF1A gene for eukaryotic translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A, eIF-4C), the 3' end of the RPS6KA3 gene for ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2, MRX19, ISPK-1, MAPKAPK1B), a novel gene and three CpG islands, complete sequence Length = 187275 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tctggcaaaggggagagatg 195 |||||||||||||||||||| Sbjct: 68769 tctggcaaaggggagagatg 68788
>emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chromosome 6 Contains the CDYL gene for a Y chromosome-like chromodomain protein, a ribosomal protein S18 (RPS18) pseudogene, the gene for ribonuclease P 40kD subunit (RPP40) and CpG islands, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 aagcttcctgaagaaatcta 620 |||||||||||||||||||| Sbjct: 49791 aagcttcctgaagaaatcta 49810
>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3 Contains the GTF3C5 gene for general transcription factor IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester lipase (bile salt-stimulated lipase), the CELP gene for carboxyl ester lipase pseudogene, the RALGDS gene for ral guanine nucleotide dissociation stimulator, the gene for Forssman glycolipid synthetase (FS), three novel genes and six CpG islands, complete sequence Length = 152863 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 20931 gtacagctccagcctcttgg 20912
>emb|AL137220.8| Human DNA sequence from clone RP11-354I10 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 126482 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gaaagttgcctaatctctct 387 |||||||||||||||||||| Sbjct: 11352 gaaagttgcctaatctctct 11371
>emb|BX465208.18| Zebrafish DNA sequence from clone DKEYP-91H6 in linkage group 6, complete sequence Length = 187635 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tgtcatctaataagaatata 134 |||||||||||||||||||| Sbjct: 84511 tgtcatctaataagaatata 84492
>emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 in linkage group 16, complete sequence Length = 234579 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 92796 aacatatgccagaacagttg 92777
>emb|BX950223.8| Zebrafish DNA sequence from clone CH211-29N12 in linkage group 5, complete sequence Length = 54944 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 26737 aacatatgccagaacagttg 26756
>emb|BX571688.3| Zebrafish DNA sequence from clone DKEY-200H23, complete sequence Length = 181466 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 2397 aacatatgccagaacagttg 2378
>dbj|AB232136.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:X313 Length = 5232 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 1651 ccgcgtggtcctcgtcgaggagct 1674
>dbj|AB232135.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU2-5 Length = 5248 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 1655 ccgcgtggtcctcgtcgaggagct 1678
>dbj|AB232134.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU1-76 Length = 5238 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 1648 ccgcgtggtcctcgtcgaggagct 1671
>dbj|AB232132.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:A951 Length = 5227 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 1654 ccgcgtggtcctcgtcgaggagct 1677
>emb|CR376753.8| Zebrafish DNA sequence from clone DKEY-182P15 in linkage group 20, complete sequence Length = 214807 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tgtcatctaataagaatata 134 |||||||||||||||||||| Sbjct: 68207 tgtcatctaataagaatata 68188
>dbj|AK055092.1| Homo sapiens cDNA FLJ30530 fis, clone BRAWH2001092, highly similar to Homo sapiens transcription factor IIIC63 mRNA Length = 2380 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 488 gtacagctccagcctcttgg 469
>gb|AC023283.10| Homo sapiens chromosome 10 clone RP11-539I5, complete sequence Length = 218074 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ggaaagttgcctaatctctc 386 |||||||||||||||||||| Sbjct: 84751 ggaaagttgcctaatctctc 84732
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gctccggtacagctccagcc 311 |||||||||||||||||||| Sbjct: 48638 gctccggtacagctccagcc 48619
>gb|AF397994.1|AF397994 Cyprinodon nevadensis mionectes microsatellite AC1 sequence Length = 441 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 663 tcttcttgctttcgtccctcattctttc 690 ||||||| ||||| |||||||||||||| Sbjct: 393 tcttctttctttcctccctcattctttc 366
>gb|AF449714.1|AF449714 Cercopithecine herpesvirus 2 unique short region, partial sequence Length = 9811 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 5580 ccgcgtggtcctcgtcgaggagct 5603
>gb|AC017091.8| Homo sapiens BAC clone RP11-506N2 from 4, complete sequence Length = 201536 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 caaaggggagagatgtcacc 200 |||||||||||||||||||| Sbjct: 39527 caaaggggagagatgtcacc 39546
>emb|BX571765.6| Zebrafish DNA sequence from clone DKEYP-77G7 in linkage group 23, complete sequence Length = 147933 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 83894 aacatatgccagaacagttg 83913
>emb|BX088600.12| Zebrafish DNA sequence from clone DKEY-166M7 in linkage group 16, complete sequence Length = 192992 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 120429 aacatatgccagaacagttg 120410
>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 1, complete sequence Length = 166353 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 104922 aacatatgccagaacagttg 104903
>emb|BX296541.5| Zebrafish DNA sequence from clone CH211-278P9, complete sequence Length = 157802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 5584 aacatatgccagaacagttg 5603
>emb|BX248521.12| Zebrafish DNA sequence from clone CH211-243C14 in linkage group 23, complete sequence Length = 144888 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 79844 aacatatgccagaacagttg 79825
>emb|BX321872.10| Zebrafish DNA sequence from clone CH211-281K19 in linkage group 10, complete sequence Length = 78006 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 64752 aacatatgccagaacagttg 64733
>gb|AC023826.6| Homo sapiens chromosome 16 clone RP11-380E14, complete sequence Length = 196755 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gctcagtaaagaaatggtcg 415 |||||||||||||||||||| Sbjct: 55381 gctcagtaaagaaatggtcg 55362
>gb|AF443185.2| Paracoccidioides brasiliensis transcriptional repressor Sin3p (SIN3) gene, complete cds Length = 11093 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ggcaaaggggagagatgtca 198 |||||||||||||||||||| Sbjct: 2340 ggcaaaggggagagatgtca 2321
>gb|AC008067.3| Homo sapiens BAC clone RP11-303I4 from 2, complete sequence Length = 151242 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 cagaacagttgtcccaattc 527 |||||||||||||||||||| Sbjct: 111616 cagaacagttgtcccaattc 111597
>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gctcagtaaagaaatggtcg 415 |||||||||||||||||||| Sbjct: 19796 gctcagtaaagaaatggtcg 19815
>gb|AY007123.1| Homo sapiens clone CDABP0017 mRNA sequence Length = 2079 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 190 gtacagctccagcctcttgg 171
>gb|AC126332.9| Homo sapiens chromosome 15, clone RP11-665A22, complete sequence Length = 161099 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggtacagctccagcctcttg 316 |||||||||||||||||||| Sbjct: 95041 ggtacagctccagcctcttg 95060
>gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome 16, complete sequence Length = 224605 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 agcttcctgaagaaatctac 621 |||||||||||||||||||| Sbjct: 16453 agcttcctgaagaaatctac 16434
>emb|AL935280.12| Zebrafish DNA sequence from clone DKEY-261J4, complete sequence Length = 221563 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aagcacaaggagcaaaagca 87 |||||||||||||||||||| Sbjct: 182680 aagcacaaggagcaaaagca 182661
>dbj|AK000194.1| Homo sapiens cDNA FLJ20187 fis, clone COLF0433 Length = 1927 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 201 gtacagctccagcctcttgg 182
>gb|AF071172.3|AF071172 Homo sapiens HERC2 (HERC2) mRNA, complete cds Length = 15304 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ggtacagctccagcctcttg 316 |||||||||||||||||||| Sbjct: 3537 ggtacagctccagcctcttg 3518
>gb|AC005661.1|AC005661 citb_54_o_2, complete sequence Length = 84633 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ggaaagttgcctaatctctc 386 |||||||||||||||||||| Sbjct: 1989 ggaaagttgcctaatctctc 1970
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ccgcggggtcctcgtcgaggagct 365 ||||| |||||||||||||||||| Sbjct: 143203 ccgcgtggtcctcgtcgaggagct 143226
>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18, complete sequence Length = 189984 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 55399 aacatatgccagaacagttg 55380
>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7, complete sequence Length = 170614 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 76700 aacatatgccagaacagttg 76681
>gb|AF133124.1|AF133124 Homo sapiens transcription factor IIIC63 mRNA, complete cds Length = 2385 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 481 gtacagctccagcctcttgg 462
>emb|AL133249.1|CNS01DUF BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 358K12 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 168571 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tgcctaatctctcttgctcc 393 |||||||||||||||||||| Sbjct: 34862 tgcctaatctctcttgctcc 34881
>emb|AL954770.9| Zebrafish DNA sequence from clone CH211-193A15, complete sequence Length = 151426 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 6939 aacatatgccagaacagttg 6958
>gb|AC004583.1|AC004583 Human Chromosome 15q11-q13 PAC clone pDJ778a2, complete sequence Length = 132493 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ggtacagctccagcctcttg 316 |||||||||||||||||||| Sbjct: 80825 ggtacagctccagcctcttg 80806
>emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in linkage group 20, complete sequence Length = 213980 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 113223 aacatatgccagaacagttg 113204
>emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chromosome X, complete sequence Length = 233590 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 tgtcatctaataagaatatatgac 138 ||||||||||||| |||||||||| Sbjct: 132167 tgtcatctaataaaaatatatgac 132144
>emb|AL929514.7| Zebrafish DNA sequence from clone CH211-187D9, complete sequence Length = 174473 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 103205 aacatatgccagaacagttg 103224
>gb|BC006409.1| Homo sapiens cDNA clone IMAGE:3534349, containing frame-shift errors Length = 2136 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 192 gtacagctccagcctcttgg 173
>gb|AC000394.1|AC000394 Genomic sequence from Human 9q34, complete sequence Length = 44294 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 24242 gtacagctccagcctcttgg 24223
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcgaggagcttggaaagttg 375 |||||||||||||||||||| Sbjct: 3359423 tcgaggagcttggaaagttg 3359442
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aacatatgccagaacagttg 518 |||||||||||||||||||| Sbjct: 12827 aacatatgccagaacagttg 12846
>emb|AJ420443.1|HSA420443 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1607066 Length = 2136 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gtacagctccagcctcttgg 317 |||||||||||||||||||| Sbjct: 194 gtacagctccagcctcttgg 175 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,708,147 Number of Sequences: 3902068 Number of extensions: 6708147 Number of successful extensions: 157664 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 157294 Number of HSP's gapped (non-prelim): 362 length of query: 694 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 671 effective length of database: 17,143,297,704 effective search space: 11503152759384 effective search space used: 11503152759384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)