ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags34n05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full insert mRNA sequence Length = 2056 Score = 1082 bits (546), Expect = 0.0 Identities = 684/727 (94%), Gaps = 6/727 (0%) Strand = Plus / Minus Query: 2 aagagtacaatatgttgaaatcc-cagttaaatctatttgaataaaactagagacttcca 60 ||||||||||||||||||||||| ||||||||||||||||| |||||||||| | || || Sbjct: 2004 aagagtacaatatgttgaaatccacagttaaatctatttgagtaaaactagacaatttca 1945 Query: 61 gagtctgaagcaccaagcacatacagtaaccaggaacaagcaagaaaagttccaactaag 120 | |||||||||||||||||||||||| |||||| |||||||| | ||||||||||| Sbjct: 1944 g-gtctgaagcaccaagcacatacagaaaccagaaacaagcagca----ttccaactaag 1890 Query: 121 aagcaacaaagccatcgctcaacgaaagagcagccagctgatcagctggaacattggtct 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 1889 aagcaacaaagccatcgctcagcgaaagagcagccagctgatcagctggaacattggttt 1830 Query: 181 gctgctgctgagcgctgcggagaacctccatagcttcagcgaccttagacttcaaagcat 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1829 gctgctgctgagcactgcggagaacctccatagcttcagcgaccttagacttcagagcat 1770 Query: 241 caggtgactcgattagatgaagaacctcagtttggtccatctccaaaagcataccggtaa 300 |||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| |||| Sbjct: 1769 caggtgactcgattagatgaagggcctcagtctggtccatctccagaagcataccagtaa 1710 Query: 301 ccttggcagcctgatcatgctccagctgatcaacaagtggatacaagctttcaccaagca 360 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1709 ccttggcagcctggtcatgctccagctgatcaacaagtgggtacaagctttcaccaagca 1650 Query: 361 tcagtcgttgctgctccggcggagagttggcaagtgcagatgccaatgctccactagaaa 420 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1649 tcagtcgttgctgctccggcggagagttagcaagtgcagatgctaatgctccactagaaa 1590 Query: 421 cttgctgcggtgctccagtgtcaccaggagtcatccttcccatctcatacagagatggcg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1589 cttgctgcggtgctccagtgtcaccaggagtcatccttcccatctcatacagcgatggca 1530 Query: 481 ccatacctccaacaccacggaatgcagcctcaggcatgccacggcccgacgcataacggt 540 ||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 1529 ccatagctccaacaccacggaatgcagcatcaggcatgccacggccagacggataacggt 1470 Query: 541 aaccaccacgaccgccccttggaaccatctgctggtgacccattggcattggctgctgca 600 | |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1469 agccaccacggccgccccttggaaccatctgctgatgacccattggcattggctgctgca 1410 Query: 601 ttccaccagcacctgcacgcctcccagatgggcgttgtggttgttgaccttgctggacca 660 |||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||| |||| Sbjct: 1409 ttccaccagcacctgcgcgccttccaaatgggcgttgtggttgctgaccttgctgcacca 1350 Query: 661 ttggcatgacaaaatttggcatcggagcaacaccaggtctcattccaggaatcatatgtt 720 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1349 ttggcatgacgaaatttggcattggagcaacaccaggtctcattccaggaatcatatgtt 1290 Query: 721 gctggaa 727 ||||||| Sbjct: 1289 gctggaa 1283
>ref|XM_481529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 462 bits (233), Expect = e-127 Identities = 494/581 (85%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 1955 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 1896 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 1895 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 1836 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 1835 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 1776 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcggagag 386 ||||||||||| || || || ||||||||||||||||||| |||||| || || || || Sbjct: 1775 tgatcaacaagcgggtataaactttcaccaagcatcagtctttgctgatctgggggtgaa 1716 Query: 387 ttggcaagtgcagatgccaatgctccactagaaacttgctgcggtgctccagtgtcacca 446 ||||| |||||||| |||||||||||| | | ||| ||| | ||||| |||| |||| Sbjct: 1715 ttggccagtgcagaggccaatgctccaattggaacctgcggtggtgcaccagcatcactg 1656 Query: 447 ggagtcatccttcccatctcatacagagatggcgccatacctccaacaccacggaatgca 506 ||| ||| |||||||||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 1655 agaggcattcttcccatctcatatggggatggcactaaacctccaacaccacggaatgca 1596 Query: 507 gcctcaggcatgccacggcccgacgcataacggtaaccaccacgaccgccccttggaacc 566 || ||||||||||| || || |||||||||||||||||||||| |||||||||| | Sbjct: 1595 ttgtctggcatgccacgaccagaagcataacggtaaccaccacgactaccccttggaagc 1536 Query: 567 atctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccca 626 || |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| ||| Sbjct: 1535 atttgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttcca 1476 Query: 627 gatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcgga 686 | ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 1475 gctggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggt 1416 Query: 687 gcaacaccaggtctcattccaggaatcatatgttgctggaa 727 |||||| ||| ||||| |||||||| | |||||||||||| Sbjct: 1415 ccaacactaggcctcataccaggaatgagatgttgctggaa 1375
>dbj|AK099783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096A14, full insert sequence Length = 1416 Score = 462 bits (233), Expect = e-127 Identities = 494/581 (85%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 1180 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 1121 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 1120 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 1061 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 1060 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 1001 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcggagag 386 ||||||||||| || || || ||||||||||||||||||| |||||| || || || || Sbjct: 1000 tgatcaacaagcgggtataaactttcaccaagcatcagtctttgctgatctgggggtgaa 941 Query: 387 ttggcaagtgcagatgccaatgctccactagaaacttgctgcggtgctccagtgtcacca 446 ||||| |||||||| |||||||||||| | | ||| ||| | ||||| |||| |||| Sbjct: 940 ttggccagtgcagaggccaatgctccaattggaacctgcggtggtgcaccagcatcactg 881 Query: 447 ggagtcatccttcccatctcatacagagatggcgccatacctccaacaccacggaatgca 506 ||| ||| |||||||||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 880 agaggcattcttcccatctcatatggggatggcactaaacctccaacaccacggaatgca 821 Query: 507 gcctcaggcatgccacggcccgacgcataacggtaaccaccacgaccgccccttggaacc 566 || ||||||||||| || || |||||||||||||||||||||| |||||||||| | Sbjct: 820 ttgtctggcatgccacgaccagaagcataacggtaaccaccacgactaccccttggaagc 761 Query: 567 atctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccca 626 || |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| ||| Sbjct: 760 atttgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttcca 701 Query: 627 gatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcgga 686 | ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 700 gctggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggt 641 Query: 687 gcaacaccaggtctcattccaggaatcatatgttgctggaa 727 |||||| ||| ||||| |||||||| | |||||||||||| Sbjct: 640 ccaacactaggcctcataccaggaatgagatgttgctggaa 600
>dbj|AK104792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F09, full insert sequence Length = 1180 Score = 462 bits (233), Expect = e-127 Identities = 494/581 (85%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 969 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 910 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 909 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 850 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 849 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 790 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcggagag 386 ||||||||||| || || || ||||||||||||||||||| |||||| || || || || Sbjct: 789 tgatcaacaagcgggtataaactttcaccaagcatcagtctttgctgatctgggggtgaa 730 Query: 387 ttggcaagtgcagatgccaatgctccactagaaacttgctgcggtgctccagtgtcacca 446 ||||| |||||||| |||||||||||| | | ||| ||| | ||||| |||| |||| Sbjct: 729 ttggccagtgcagaggccaatgctccaattggaacctgcggtggtgcaccagcatcactg 670 Query: 447 ggagtcatccttcccatctcatacagagatggcgccatacctccaacaccacggaatgca 506 ||| ||| |||||||||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 669 agaggcattcttcccatctcatatggggatggcactaaacctccaacaccacggaatgca 610 Query: 507 gcctcaggcatgccacggcccgacgcataacggtaaccaccacgaccgccccttggaacc 566 || ||||||||||| || || |||||||||||||||||||||| |||||||||| | Sbjct: 609 ttgtctggcatgccacgaccagaagcataacggtaaccaccacgactaccccttggaagc 550 Query: 567 atctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccca 626 || |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| ||| Sbjct: 549 atttgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttcca 490 Query: 627 gatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcgga 686 | ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 489 gctggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggt 430 Query: 687 gcaacaccaggtctcattccaggaatcatatgttgctggaa 727 |||||| ||| ||||| |||||||| | |||||||||||| Sbjct: 429 ccaacactaggcctcataccaggaatgagatgttgctggaa 389
>dbj|AK098867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A12, full insert sequence Length = 2412 Score = 462 bits (233), Expect = e-127 Identities = 494/581 (85%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 2122 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 2063 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 2062 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 2003 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 2002 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 1943 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcggagag 386 ||||||||||| || || || ||||||||||||||||||| |||||| || || || || Sbjct: 1942 tgatcaacaagcgggtataaactttcaccaagcatcagtctttgctgatctgggggtgaa 1883 Query: 387 ttggcaagtgcagatgccaatgctccactagaaacttgctgcggtgctccagtgtcacca 446 ||||| |||||||| |||||||||||| | | ||| ||| | ||||| |||| |||| Sbjct: 1882 ttggccagtgcagaggccaatgctccaattggaacctgcggtggtgcaccagcatcactg 1823 Query: 447 ggagtcatccttcccatctcatacagagatggcgccatacctccaacaccacggaatgca 506 ||| ||| |||||||||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 1822 agaggcattcttcccatctcatatggggatggcactaaacctccaacaccacggaatgca 1763 Query: 507 gcctcaggcatgccacggcccgacgcataacggtaaccaccacgaccgccccttggaacc 566 || ||||||||||| || || |||||||||||||||||||||| |||||||||| | Sbjct: 1762 ttgtctggcatgccacgaccagaagcataacggtaaccaccacgactaccccttggaagc 1703 Query: 567 atctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccca 626 || |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| ||| Sbjct: 1702 atttgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttcca 1643 Query: 627 gatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcgga 686 | ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 1642 gctggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggt 1583 Query: 687 gcaacaccaggtctcattccaggaatcatatgttgctggaa 727 |||||| ||| ||||| |||||||| | |||||||||||| Sbjct: 1582 ccaacactaggcctcataccaggaatgagatgttgctggaa 1542
>dbj|AK065167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C13, full insert sequence Length = 2387 Score = 462 bits (233), Expect = e-127 Identities = 494/581 (85%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 2152 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 2093 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 2092 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 2033 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 2032 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 1973 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcggagag 386 ||||||||||| || || || ||||||||||||||||||| |||||| || || || || Sbjct: 1972 tgatcaacaagcgggtataaactttcaccaagcatcagtctttgctgatctgggggtgaa 1913 Query: 387 ttggcaagtgcagatgccaatgctccactagaaacttgctgcggtgctccagtgtcacca 446 ||||| |||||||| |||||||||||| | | ||| ||| | ||||| |||| |||| Sbjct: 1912 ttggccagtgcagaggccaatgctccaattggaacctgcggtggtgcaccagcatcactg 1853 Query: 447 ggagtcatccttcccatctcatacagagatggcgccatacctccaacaccacggaatgca 506 ||| ||| |||||||||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 1852 agaggcattcttcccatctcatatggggatggcactaaacctccaacaccacggaatgca 1793 Query: 507 gcctcaggcatgccacggcccgacgcataacggtaaccaccacgaccgccccttggaacc 566 || ||||||||||| || || |||||||||||||||||||||| |||||||||| | Sbjct: 1792 ttgtctggcatgccacgaccagaagcataacggtaaccaccacgactaccccttggaagc 1733 Query: 567 atctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccca 626 || |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| ||| Sbjct: 1732 atttgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttcca 1673 Query: 627 gatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcgga 686 | ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 1672 gctggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggt 1613 Query: 687 gcaacaccaggtctcattccaggaatcatatgttgctggaa 727 |||||| ||| ||||| |||||||| | |||||||||||| Sbjct: 1612 ccaacactaggcctcataccaggaatgagatgttgctggaa 1572
>dbj|AK060952.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G03, full insert sequence Length = 1208 Score = 462 bits (233), Expect = e-127 Identities = 494/581 (85%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 973 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 914 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 913 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 854 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 853 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 794 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcggagag 386 ||||||||||| || || || ||||||||||||||||||| |||||| || || || || Sbjct: 793 tgatcaacaagcgggtataaactttcaccaagcatcagtctttgctgatctgggggtgaa 734 Query: 387 ttggcaagtgcagatgccaatgctccactagaaacttgctgcggtgctccagtgtcacca 446 ||||| |||||||| |||||||||||| | | ||| ||| | ||||| |||| |||| Sbjct: 733 ttggccagtgcagaggccaatgctccaattggaacctgcggtggtgcaccagcatcactg 674 Query: 447 ggagtcatccttcccatctcatacagagatggcgccatacctccaacaccacggaatgca 506 ||| ||| |||||||||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 673 agaggcattcttcccatctcatatggggatggcactaaacctccaacaccacggaatgca 614 Query: 507 gcctcaggcatgccacggcccgacgcataacggtaaccaccacgaccgccccttggaacc 566 || ||||||||||| || || |||||||||||||||||||||| |||||||||| | Sbjct: 613 ttgtctggcatgccacgaccagaagcataacggtaaccaccacgactaccccttggaagc 554 Query: 567 atctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccca 626 || |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| ||| Sbjct: 553 atttgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttcca 494 Query: 627 gatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcgga 686 | ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 493 gctggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggt 434 Query: 687 gcaacaccaggtctcattccaggaatcatatgttgctggaa 727 |||||| ||| ||||| |||||||| | |||||||||||| Sbjct: 433 ccaacactaggcctcataccaggaatgagatgttgctggaa 393
>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12, complete sequence Length = 146632 Score = 190 bits (96), Expect = 4e-45 Identities = 186/216 (86%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 59299 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 59240 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 59239 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 59180 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 59179 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 59120 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatc 362 ||||||||||| || || || ||||||||||||||| Sbjct: 59119 tgatcaacaagcgggtataaactttcaccaagcatc 59084 Score = 170 bits (86), Expect = 4e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 570 tgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctcccagat 629 |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| |||| | Sbjct: 58681 tgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttccagct 58622 Query: 630 gggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcggagca 689 || ||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 58621 ggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggtcca 58562 Query: 690 acaccaggtctcattccaggaatcatatgttgctggaa 727 |||| ||| ||||| |||||||| | |||||||||||| Sbjct: 58561 acactaggcctcataccaggaatgagatgttgctggaa 58524 Score = 117 bits (59), Expect = 5e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 362 cagtcgttgctgctccggcggagagttggcaagtgcagatgccaatgctccactagaaac 421 ||||| |||||| || || || || ||||| |||||||| |||||||||||| | | ||| Sbjct: 58990 cagtctttgctgatctgggggtgaattggccagtgcagaggccaatgctccaattggaac 58931 Query: 422 ttgctgcggtgctccagtgtcaccaggagtcatccttcccatctcatacagagatggcgc 481 ||| | ||||| |||| |||| ||| ||| |||||||||||||| | |||||| | Sbjct: 58930 ctgcggtggtgcaccagcatcactgagaggcattcttcccatctcatatggggatggcac 58871 Query: 482 catacctccaacaccacggaatgcagcctcaggcatgccacggcccgacgcataacggta 541 | |||||||||||||||||||||| || ||||||||||| || || ||||||||||| Sbjct: 58870 taaacctccaacaccacggaatgcattgtctggcatgccacgaccagaagcataacggta 58811 Query: 542 accaccacgaccgccccttggaaccatctgc 572 ||||||||||| |||||||||| ||||||| Sbjct: 58810 accaccacgactaccccttggaagcatctgc 58780
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 190 bits (96), Expect = 4e-45 Identities = 186/216 (86%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 13471672 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 13471613 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 13471612 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 13471553 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 13471552 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 13471493 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatc 362 ||||||||||| || || || ||||||||||||||| Sbjct: 13471492 tgatcaacaagcgggtataaactttcaccaagcatc 13471457 Score = 170 bits (86), Expect = 4e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 570 tgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctcccagat 629 |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| |||| | Sbjct: 13471054 tgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttccagct 13470995 Query: 630 gggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcggagca 689 || ||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 13470994 ggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggtcca 13470935 Query: 690 acaccaggtctcattccaggaatcatatgttgctggaa 727 |||| ||| ||||| |||||||| | |||||||||||| Sbjct: 13470934 acactaggcctcataccaggaatgagatgttgctggaa 13470897 Score = 117 bits (59), Expect = 5e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 362 cagtcgttgctgctccggcggagagttggcaagtgcagatgccaatgctccactagaaac 421 ||||| |||||| || || || || ||||| |||||||| |||||||||||| | | ||| Sbjct: 13471363 cagtctttgctgatctgggggtgaattggccagtgcagaggccaatgctccaattggaac 13471304 Query: 422 ttgctgcggtgctccagtgtcaccaggagtcatccttcccatctcatacagagatggcgc 481 ||| | ||||| |||| |||| ||| ||| |||||||||||||| | |||||| | Sbjct: 13471303 ctgcggtggtgcaccagcatcactgagaggcattcttcccatctcatatggggatggcac 13471244 Query: 482 catacctccaacaccacggaatgcagcctcaggcatgccacggcccgacgcataacggta 541 | |||||||||||||||||||||| || ||||||||||| || || ||||||||||| Sbjct: 13471243 taaacctccaacaccacggaatgcattgtctggcatgccacgaccagaagcataacggta 13471184 Query: 542 accaccacgaccgccccttggaaccatctgc 572 ||||||||||| |||||||||| ||||||| Sbjct: 13471183 accaccacgactaccccttggaagcatctgc 13471153 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 cccttggaaccatctgctgg 575 |||||||||||||||||||| Sbjct: 11843770 cccttggaaccatctgctgg 11843789
>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451H06 Length = 136473 Score = 190 bits (96), Expect = 4e-45 Identities = 186/216 (86%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 9986 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 9927 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 9926 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 9867 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 9866 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 9807 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatc 362 ||||||||||| || || || ||||||||||||||| Sbjct: 9806 tgatcaacaagcgggtataaactttcaccaagcatc 9771 Score = 170 bits (86), Expect = 4e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 570 tgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctcccagat 629 |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| |||| | Sbjct: 9368 tgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttccagct 9309 Query: 630 gggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcggagca 689 || ||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 9308 ggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggtcca 9249 Query: 690 acaccaggtctcattccaggaatcatatgttgctggaa 727 |||| ||| ||||| |||||||| | |||||||||||| Sbjct: 9248 acactaggcctcataccaggaatgagatgttgctggaa 9211 Score = 117 bits (59), Expect = 5e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 362 cagtcgttgctgctccggcggagagttggcaagtgcagatgccaatgctccactagaaac 421 ||||| |||||| || || || || ||||| |||||||| |||||||||||| | | ||| Sbjct: 9677 cagtctttgctgatctgggggtgaattggccagtgcagaggccaatgctccaattggaac 9618 Query: 422 ttgctgcggtgctccagtgtcaccaggagtcatccttcccatctcatacagagatggcgc 481 ||| | ||||| |||| |||| ||| ||| |||||||||||||| | |||||| | Sbjct: 9617 ctgcggtggtgcaccagcatcactgagaggcattcttcccatctcatatggggatggcac 9558 Query: 482 catacctccaacaccacggaatgcagcctcaggcatgccacggcccgacgcataacggta 541 | |||||||||||||||||||||| || ||||||||||| || || ||||||||||| Sbjct: 9557 taaacctccaacaccacggaatgcattgtctggcatgccacgaccagaagcataacggta 9498 Query: 542 accaccacgaccgccccttggaaccatctgc 572 ||||||||||| |||||||||| ||||||| Sbjct: 9497 accaccacgactaccccttggaagcatctgc 9467
>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_B07 Length = 118763 Score = 190 bits (96), Expect = 4e-45 Identities = 186/216 (86%) Strand = Plus / Minus Query: 147 agagcagccagctgatcagctggaacattggtctgctgctgctgagcgctgcggagaacc 206 |||||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||| Sbjct: 108399 agagcagctagctgatcagttggggtatttgcctgctgctgctgagcattacggagaact 108340 Query: 207 tccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaagaacc 266 |||||||| ||||||||||| | ||| | ||||||||||||||| || ||||| ||||| Sbjct: 108339 tccatagcctcagcgaccttggccttaagagcatcaggtgactcaatgagatggagaact 108280 Query: 267 tcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctccagc 326 ||||| |||||||||||||||||||| || || ||||| || |||||||||||||||||| Sbjct: 108279 tcagtctggtccatctccaaaagcatgccagtgaccttcgctgcctgatcatgctccagc 108220 Query: 327 tgatcaacaagtggatacaagctttcaccaagcatc 362 ||||||||||| || || || ||||||||||||||| Sbjct: 108219 tgatcaacaagcgggtataaactttcaccaagcatc 108184 Score = 170 bits (86), Expect = 4e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 570 tgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctcccagat 629 |||||||| |||||||||||||| ||||| |||||||||| ||||||||||| |||| | Sbjct: 107781 tgctggtggcccattggcattggttgctgaattccaccagtgcctgcacgccttccagct 107722 Query: 630 gggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcggagca 689 || ||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 107721 ggacgttgtggttgttgaccttgctggaccataggcatgacaaaatttggaattggtcca 107662 Query: 690 acaccaggtctcattccaggaatcatatgttgctggaa 727 |||| ||| ||||| |||||||| | |||||||||||| Sbjct: 107661 acactaggcctcataccaggaatgagatgttgctggaa 107624 Score = 117 bits (59), Expect = 5e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 362 cagtcgttgctgctccggcggagagttggcaagtgcagatgccaatgctccactagaaac 421 ||||| |||||| || || || || ||||| |||||||| |||||||||||| | | ||| Sbjct: 108090 cagtctttgctgatctgggggtgaattggccagtgcagaggccaatgctccaattggaac 108031 Query: 422 ttgctgcggtgctccagtgtcaccaggagtcatccttcccatctcatacagagatggcgc 481 ||| | ||||| |||| |||| ||| ||| |||||||||||||| | |||||| | Sbjct: 108030 ctgcggtggtgcaccagcatcactgagaggcattcttcccatctcatatggggatggcac 107971 Query: 482 catacctccaacaccacggaatgcagcctcaggcatgccacggcccgacgcataacggta 541 | |||||||||||||||||||||| || ||||||||||| || || ||||||||||| Sbjct: 107970 taaacctccaacaccacggaatgcattgtctggcatgccacgaccagaagcataacggta 107911 Query: 542 accaccacgaccgccccttggaaccatctgc 572 ||||||||||| |||||||||| ||||||| Sbjct: 107910 accaccacgactaccccttggaagcatctgc 107880
>gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (wheatpab) mRNA, complete cds Length = 2237 Score = 180 bits (91), Expect = 4e-42 Identities = 193/227 (85%) Strand = Plus / Minus Query: 183 tgctgctgagcgctgcggagaacctccatagcttcagcgaccttagacttcaaagcatca 242 ||||||||||||||||||||||||||||| |||||||| ||||| | ||| | ||| || Sbjct: 1952 tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 1893 Query: 243 ggtgactcgattagatgaagaacctcagtttggtccatctccaaaagcataccggtaacc 302 || ||||| | || ||||| |||||||| ||||||||||||| |||||| ||||| ||| Sbjct: 1892 ggcgactcaagcaggtgaagcacctcagtctggtccatctccagaagcatgccggtcacc 1833 Query: 303 ttggcagcctgatcatgctccagctgatcaacaagtggatacaagctttcaccaagcatc 362 ||||||||||| || |||||||||||||||||||| || |||||| | || ||||||||| Sbjct: 1832 ttggcagcctggtcgtgctccagctgatcaacaagagggtacaagttctcgccaagcatc 1773 Query: 363 agtcgttgctgctccggcggagagttggcaagtgcagatgccaatgc 409 | || |||| ||| || || || |||||||||||||| |||||||| Sbjct: 1772 attctttgcgtctctgggggtgaattggcaagtgcagaagccaatgc 1726 Score = 131 bits (66), Expect = 4e-27 Identities = 180/218 (82%) Strand = Plus / Minus Query: 510 tcaggcatgccacggcccgacgcataacggtaaccaccacgaccgccccttggaaccatc 569 |||||||||||||| || | | ||| |||||||||| || ||| ||||| | |||| Sbjct: 1625 tcaggcatgccacgcccggtctgatagcggtaaccacgaccaccacccctacccagcatc 1566 Query: 570 tgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctcccagat 629 ||||| |||||||| |||| | |||||||||||||||||||| || ||||| |||| | Sbjct: 1565 tgctgctgacccatctgcatggattgctgcattccaccagcaccagctcgcctaccagct 1506 Query: 630 gggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcatcggagca 689 ||||||||||||||||| |||||||| ||||| ||||| | ||| ||||||||||||||| Sbjct: 1505 gggcgttgtggttgttgtccttgctgaaccataggcatcataaagtttggcatcggagca 1446 Query: 690 acaccaggtctcattccaggaatcatatgttgctggaa 727 |||| || |||||||| || || | | |||||||||| Sbjct: 1445 ccacctggcctcattcccggcatgaaaggttgctggaa 1408
>ref|XM_450039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2314 Score = 131 bits (66), Expect = 4e-27 Identities = 174/210 (82%) Strand = Plus / Minus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 2025 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1966 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 1965 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 1906 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcgga 383 |||||||||||||| ||||||||| | ||||||||||||| || |||||| || || | Sbjct: 1905 agctgatcaacaagaggatacaagttctcaccaagcatcattctttgctgatcaggggct 1846 Query: 384 gagttggcaagtgcagatgccaatgctcca 413 | |||||| ||||||| |||||||||||| Sbjct: 1845 gcgttggccagtgcagtagccaatgctcca 1816 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 566 catctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccc 625 |||||| || |||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 1663 catctgttgctgacccattggcatgggttgctgcattccaccagcaccagcacgcctacc 1604 Query: 626 agatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || || || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 1603 agccggacgctgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 1547
>ref|XM_506632.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.15 mRNA Length = 2410 Score = 131 bits (66), Expect = 4e-27 Identities = 174/210 (82%) Strand = Plus / Minus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 2032 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1973 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 1972 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 1913 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcgga 383 |||||||||||||| ||||||||| | ||||||||||||| || |||||| || || | Sbjct: 1912 agctgatcaacaagaggatacaagttctcaccaagcatcattctttgctgatcaggggct 1853 Query: 384 gagttggcaagtgcagatgccaatgctcca 413 | |||||| ||||||| |||||||||||| Sbjct: 1852 gcgttggccagtgcagtagccaatgctcca 1823 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 566 catctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccc 625 |||||| || |||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 1670 catctgttgctgacccattggcatgggttgctgcattccaccagcaccagcacgcctacc 1611 Query: 626 agatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || || || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 1610 agccggacgctgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 1554
>dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I24, full insert sequence Length = 2410 Score = 131 bits (66), Expect = 4e-27 Identities = 174/210 (82%) Strand = Plus / Minus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 2032 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1973 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 1972 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 1913 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcgga 383 |||||||||||||| ||||||||| | ||||||||||||| || |||||| || || | Sbjct: 1912 agctgatcaacaagaggatacaagttctcaccaagcatcattctttgctgatcaggggct 1853 Query: 384 gagttggcaagtgcagatgccaatgctcca 413 | |||||| ||||||| |||||||||||| Sbjct: 1852 gcgttggccagtgcagtagccaatgctcca 1823 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 566 catctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccc 625 |||||| || |||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 1670 catctgttgctgacccattggcatgggttgctgcattccaccagcaccagcacgcctacc 1611 Query: 626 agatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || || || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 1610 agccggacgctgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 1554
>dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F07, full insert sequence Length = 2314 Score = 131 bits (66), Expect = 4e-27 Identities = 174/210 (82%) Strand = Plus / Minus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 2025 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1966 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 1965 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 1906 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcgga 383 |||||||||||||| ||||||||| | ||||||||||||| || |||||| || || | Sbjct: 1905 agctgatcaacaagaggatacaagttctcaccaagcatcattctttgctgatcaggggct 1846 Query: 384 gagttggcaagtgcagatgccaatgctcca 413 | |||||| ||||||| |||||||||||| Sbjct: 1845 gcgttggccagtgcagtagccaatgctcca 1816 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 566 catctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccc 625 |||||| || |||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 1663 catctgttgctgacccattggcatgggttgctgcattccaccagcaccagcacgcctacc 1604 Query: 626 agatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || || || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 1603 agccggacgctgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 1547
>dbj|AK058314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A04, full insert sequence Length = 1208 Score = 131 bits (66), Expect = 4e-27 Identities = 174/210 (82%) Strand = Plus / Minus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 914 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 855 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 854 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 795 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcgga 383 |||||||||||||| ||||||||| | ||||||||||||| || |||||| || || | Sbjct: 794 agctgatcaacaagaggatacaagttctcaccaagcatcattctttgctgatcaggggct 735 Query: 384 gagttggcaagtgcagatgccaatgctcca 413 | |||||| ||||||| |||||||||||| Sbjct: 734 gcgttggccagtgcagtagccaatgctcca 705 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 566 catctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccc 625 |||||| || |||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 552 catctgttgctgacccattggcatgggttgctgcattccaccagcaccagcacgcctacc 493 Query: 626 agatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || || || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 492 agccggacgctgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 436
>gb|BT018220.1| Zea mays clone EL01N0561C03.c mRNA sequence Length = 790 Score = 129 bits (65), Expect = 1e-26 Identities = 149/177 (84%) Strand = Plus / Minus Query: 197 gcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattag 256 ||||||||||||||| |||||||| ||||||| ||| | |||||| || ||||| | || Sbjct: 497 gcggagaacctccatggcttcagcaaccttagccttgagagcatctggcgactccagcag 438 Query: 257 atgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatc 316 ||||||||||| || |||||||||| ||||||| || | |||||||||||||| || Sbjct: 437 gtgaagaacctccgtctggtccatcttttaaagcatgccagagaccttggcagcctgctc 378 Query: 317 atgctccagctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctg 373 | |||||||||| |||||||| ||||||| | | |||||||||||||||| |||||| Sbjct: 377 acgctccagctgttcaacaagaggatacagggtctcaccaagcatcagtctttgctg 321 Score = 63.9 bits (32), Expect = 7e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 578 acccattggcattggctgctgcattccaccagcacctgcacgcctcccagatgggcgttg 637 |||||||||||| ||||||||||||||||||| || |||||||| |||| || ||||| Sbjct: 116 acccattggcatgggctgctgcattccaccagacccagcacgcctaccagcaggacgttg 57 Query: 638 tggttgttgaccttgctggaccat 661 ||||| || || ||||| ||||| Sbjct: 56 cggttgctgtccctgctgaaccat 33
>dbj|AK058316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A07, full insert sequence Length = 1482 Score = 123 bits (62), Expect = 9e-25 Identities = 173/210 (82%) Strand = Plus / Minus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 1104 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1045 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 1044 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 985 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctccggcgga 383 |||||||||||||| ||||||||| | ||||||||||||| | |||||| || || | Sbjct: 984 agctgatcaacaagaggatacaagttctcaccaagcatcatcctttgctgatcaggggct 925 Query: 384 gagttggcaagtgcagatgccaatgctcca 413 | |||||| ||||||| |||||||||||| Sbjct: 924 gcgttggccagtgcagtagccaatgctcca 895 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 566 catctgctggtgacccattggcattggctgctgcattccaccagcacctgcacgcctccc 625 |||||| || |||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 742 catctgttgctgacccattggcatgggttgctgcattccaccagcaccagcacgcctacc 683 Query: 626 agatgggcgttgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || || || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 682 agccggacgctgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 626
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 117 bits (59), Expect = 5e-23 Identities = 134/159 (84%) Strand = Plus / Plus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 1160054 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1160113 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 1160114 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 1160173 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatc 362 |||||||||||||| ||||||||| | |||||||||||| Sbjct: 1160174 agctgatcaacaagaggatacaagttctcaccaagcatc 1160212 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 576 tgacccattggcattggctgctgcattccaccagcacctgcacgcctcccagatgggcgt 635 |||||||||||||| || |||||||||||||||||||| |||||||| |||| || || Sbjct: 1160638 tgacccattggcatgggttgctgcattccaccagcaccagcacgcctaccagccggacgc 1160697 Query: 636 tgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 1160698 tgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 1160744
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 117 bits (59), Expect = 5e-23 Identities = 134/159 (84%) Strand = Plus / Plus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| ||||| | ||| | ||| || || ||||||| || || || Sbjct: 48648 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 48707 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 |||||||| ||||||||||||| ||||| || || ||||| |||||||| ||||||||| Sbjct: 48708 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctgctcatgctcc 48767 Query: 324 agctgatcaacaagtggatacaagctttcaccaagcatc 362 |||||||||||||| ||||||||| | |||||||||||| Sbjct: 48768 agctgatcaacaagaggatacaagttctcaccaagcatc 48806 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 576 tgacccattggcattggctgctgcattccaccagcacctgcacgcctcccagatgggcgt 635 |||||||||||||| || |||||||||||||||||||| |||||||| |||| || || Sbjct: 49232 tgacccattggcatgggttgctgcattccaccagcaccagcacgcctaccagccggacgc 49291 Query: 636 tgtggttgttgaccttgctggaccattggcatgacaaaatttggcat 682 || || ||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct: 49292 tgcggctgttgtccttgctgaaccataggcatgataaagttcggcat 49338
>gb|AY103895.1| Zea mays PCO112590 mRNA sequence Length = 1997 Score = 117 bits (59), Expect = 5e-23 Identities = 167/203 (82%) Strand = Plus / Minus Query: 197 gcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattag 256 |||||| |||||||| |||||||| ||||| | |||| |||||| || ||||| | || Sbjct: 1591 gcggaggacctccatggcttcagcaaccttggctttcagagcatctggcgactccagcag 1532 Query: 257 atgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatc 316 ||||||||||| || || ||||||||||||||||| || || |||||||||||||| || Sbjct: 1531 gtgaagaacctccgtctgatccatctccaaaagcatgccagtgaccttggcagcctgctc 1472 Query: 317 atgctccagctgatcaacaagtggatacaagctttcaccaagcatcagtcgttgctgctc 376 | | |||||||| |||||||| ||||||| | | ||||||||||| |||| ||||| || Sbjct: 1471 acgttccagctgttcaacaagaggatacaggttctcaccaagcataagtctctgctgatc 1412 Query: 377 cggcggagagttggcaagtgcag 399 || || | ||| |||||||||| Sbjct: 1411 tggtggggcgttagcaagtgcag 1389 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 578 acccattggcattggctgctgcattccaccagcac 612 |||||||||||| |||||||||||||||||||||| Sbjct: 1213 acccattggcatgggctgctgcattccaccagcac 1179
>gb|BT024028.1| Zea mays clone EL01N0420H06 mRNA sequence Length = 1123 Score = 115 bits (58), Expect = 2e-22 Identities = 142/170 (83%) Strand = Plus / Minus Query: 197 gcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattag 256 |||||| |||||||| |||||||| ||||| | |||| |||||| || ||||| | || Sbjct: 782 gcggaggacctccatggcttcagcaaccttggctttcagagcatctggcgactccagcag 723 Query: 257 atgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatc 316 ||||||||||| || || ||||||||||||||||| || || |||||||||||||| || Sbjct: 722 gtgaagaacctccgtctgatccatctccaaaagcatgccagtgaccttggcagcctgctc 663 Query: 317 atgctccagctgatcaacaagtggatacaagctttcaccaagcatcagtc 366 | | |||||||| |||||||| ||||||| | | ||||||||||| |||| Sbjct: 662 acgttccagctgttcaacaagaggatacaggttctcaccaagcataagtc 613 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 578 acccattggcattggctgctgcattccaccagcac 612 |||||||||||| |||||||||||||||||||||| Sbjct: 404 acccattggcatgggctgctgcattccaccagcac 370
>gb|AF190657.1|AF190657 Nicotiana tabacum clone 7 poly(A)-binding protein (PABP) mRNA, partial cds Length = 1651 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 201 agaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatga 260 ||||| |||||||| ||||| || |||| ||||| ||| || ||||| || | ||||| Sbjct: 1364 agaacttccatagcctcagcaactttagccttcagagcctctggtgattcaagcagatgc 1305 Query: 261 agaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgc 320 | ||||||||| || ||||| || | |||||| || |||||||| || || || || ||| Sbjct: 1304 aaaacctcagtctgatccatttcaagaagcatgcctgtaacctttgctgcatgctcgtgc 1245 Query: 321 tccagctgatcaacaagtggatacaagctttcacc 355 |||||||||||||||||||| ||||| |||||||| Sbjct: 1244 tccagctgatcaacaagtgggtacaaactttcacc 1210
>gb|AF240679.1|AF240679 Cucumis sativus poly(A)-binding protein mRNA, complete cds Length = 2603 Score = 81.8 bits (41), Expect = 3e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 203 aacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaag 262 ||||||||| ||||| || ||||||| |||| ||| || || ||||| | | ||| || Sbjct: 2266 aacctccattgcttccgccaccttagctttcagagcttcgggcgactcaagcaaatgtag 2207 Query: 263 aacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctc 322 |||||||||||||||||| ||||| ||||| || || |||||||| || | |||| |||| Sbjct: 2206 aacctcagtttggtccatttccaatagcattcctgttaccttggcggcattatcaggctc 2147 Query: 323 cagctgatcaacaagtggata 343 ||||| |||||||||||||| Sbjct: 2146 tagctgttcaacaagtggata 2126 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 645 tgaccttgctggaccattggcatgacaaaatttggcatcggagcaacaccaggtctcatt 704 ||||| ||||| |||||||||| | ||||||||||| ||| | ||||||| |||||| Sbjct: 1824 tgaccctgctgaaccattggcacaaagaaatttggcatgggacctccaccaggcctcatt 1765 Query: 705 ccagg 709 ||||| Sbjct: 1764 ccagg 1760
>ref|XM_473087.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1980 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Minus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 ||||||| || ||||| || ||||| ||||| ||||||| ||| || || ||||||| | Sbjct: 1900 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 1841 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || || |||||||||| |||||| ||||| |||||||| || || | Sbjct: 1840 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggccgcatggt 1781 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || ||||| | ||||| |||||||||| |||||||||||| Sbjct: 1780 tctgttccagaagctcaaccagtggatacaggctttcaccaag 1738
>gb|BT009480.1| Triticum aestivum clone wr1.pk0038.g11:fis, full insert mRNA sequence Length = 844 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Plus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 |||||||||| ||||| || || || ||||| ||||| | ||| || || ||||||| | Sbjct: 308 tgcggagaacatccatcgcctcggcaaccttggacttgagagcctctggagactcgagca 367 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || ||||||||||||| |||||| ||||| ||||||||||| || | Sbjct: 368 gatgcagcacctccgtctggtccatctccagaagcatgccggtcaccttggcagcttgtt 427 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || || |||| |||||||||||||| | |||||| ||||| Sbjct: 428 ggtgttcaagcttctcaacaagtggatagaggctttcgccaag 470
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Plus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 ||||||| || ||||| || ||||| ||||| ||||||| ||| || || ||||||| | Sbjct: 52095 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 52154 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || || |||||||||| |||||| ||||| |||||||| || || | Sbjct: 52155 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggccgcatggt 52214 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || ||||| | ||||| |||||||||| |||||||||||| Sbjct: 52215 tctgttccagaagctcaaccagtggatacaggctttcaccaag 52257
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Plus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 ||||||| || ||||| || ||||| ||||| ||||||| ||| || || ||||||| | Sbjct: 25170428 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 25170487 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || || |||||||||| |||||| ||||| |||||||| || || | Sbjct: 25170488 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggccgcatggt 25170547 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || ||||| | ||||| |||||||||| |||||||||||| Sbjct: 25170548 tctgttccagaagctcaaccagtggatacaggctttcaccaag 25170590
>dbj|AK105555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-B03, full insert sequence Length = 1647 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Minus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 ||||||| || ||||| || ||||| ||||| ||||||| ||| || || ||||||| | Sbjct: 744 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 685 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || || |||||||||| |||||| ||||| |||||||| || || | Sbjct: 684 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggccgcatggt 625 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || ||||| | ||||| |||||||||| |||||||||||| Sbjct: 624 tctgttccagaagctcaaccagtggatacaggctttcaccaag 582
>dbj|AK104208.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B11, full insert sequence Length = 1050 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Minus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 ||||||| || ||||| || ||||| ||||| ||||||| ||| || || ||||||| | Sbjct: 694 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 635 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || || |||||||||| |||||| ||||| |||||||| || || | Sbjct: 634 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggccgcatggt 575 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || ||||| | ||||| |||||||||| |||||||||||| Sbjct: 574 tctgttccagaagctcaaccagtggatacaggctttcaccaag 532
>dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J03, full insert sequence Length = 2549 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Minus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 ||||||| || ||||| || ||||| ||||| ||||||| ||| || || ||||||| | Sbjct: 2180 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 2121 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || || |||||||||| |||||| ||||| |||||||| || || | Sbjct: 2120 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggccgcatggt 2061 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || ||||| | ||||| |||||||||| |||||||||||| Sbjct: 2060 tctgttccagaagctcaaccagtggatacaggctttcaccaag 2018
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 77.8 bits (39), Expect = 5e-11 Identities = 132/163 (80%) Strand = Plus / Plus Query: 196 tgcggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgatta 255 ||||||| || ||||| || ||||| ||||| ||||||| ||| || || ||||||| | Sbjct: 117855 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 117914 Query: 256 gatgaagaacctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgat 315 |||| || ||||| || || |||||||||| |||||| ||||| |||||||| || || | Sbjct: 117915 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggccgcatggt 117974 Query: 316 catgctccagctgatcaacaagtggatacaagctttcaccaag 358 || ||||| | ||||| |||||||||| |||||||||||| Sbjct: 117975 tctgttccagaagctcaaccagtggatacaggctttcaccaag 118017
>gb|AF349964.1| Daucus carota poly(A)-binding protein mRNA, complete cds Length = 2491 Score = 73.8 bits (37), Expect = 7e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 230 cttcaaagcatcaggtgactcgattagatgaagaacctcagtttggtccatctccaaaag 289 ||||| ||||||||||||||| | | ||| ||||| ||||||||||||||||| ||||| Sbjct: 2088 cttcagagcatcaggtgactctaacaaatgcagaacttcagtttggtccatctctaaaag 2029 Query: 290 cataccggtaaccttggcagcctgatcatgctc 322 ||| || || || ||||| || ||||||||||| Sbjct: 2028 catgcctgtgactttggctgcatgatcatgctc 1996 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 645 tgaccttgctggaccattggcatgacaaaatttggcat 682 ||||||||||| ||||||||||||| ||||||||||| Sbjct: 1670 tgaccttgctgtaccattggcatgaagaaatttggcat 1633
>gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete sequence Length = 121459 Score = 69.9 bits (35), Expect = 1e-08 Identities = 116/143 (81%) Strand = Plus / Plus Query: 204 acctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagatgaaga 263 |||||||| |||||||| || |||| ||| | |||||| ||||||||||| | ||| | Sbjct: 82896 acctccatggcttcagcaactttagccttgagagcatctggtgactcgatcaaatgcaat 82955 Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcctgatcatgctcc 323 || |||| ||||||||||||| |||||| || |||||||| || || |||||| ||| Sbjct: 82956 acttcaggctggtccatctccagaagcatgccagtaaccttagctgctgaatcatgttcc 83015 Query: 324 agctgatcaacaagtggatacaa 346 |||||||| || || |||||||| Sbjct: 83016 agctgatctactagcggatacaa 83038 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 676 ttggcatcggagcaacaccaggtctcattccaggaa 711 ||||||| ||| || ||||||||||||| ||||||| Sbjct: 83572 ttggcataggaccaccaccaggtctcatcccaggaa 83607
>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence Length = 102937 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 641 ttgttgaccttgctggaccattggcatgacaaaatttggcatcggagcaacaccaggtct 700 ||||||||| ||||| ||||| ||||||| || |||||||| |||||| |||| ||||| Sbjct: 23998 ttgttgaccctgctgaaccatgggcatgaagaagtttggcattggagcaccacctggtct 24057 Query: 701 cattccaggaa 711 ||||||||||| Sbjct: 24058 cattccaggaa 24068 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 243 ggtgactcgattagatgaagaacctcagtttggtccatctccaaaagcataccggtaacc 302 |||||||| || ||||| | ||||||| ||||||||||||||||||||||| |||||| Sbjct: 23458 ggtgactcaatcagatgtaacacctcaggctggtccatctccaaaagcataccagtaacc 23517 Query: 303 ttggcagc 310 || ||||| Sbjct: 23518 tttgcagc 23525
>gb|DQ019455.1| Lilium longiflorum clone LP61 poly(A)-binding protein-like mRNA, partial sequence Length = 827 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 641 ttgttgaccttgctggaccattggcatgacaaaatttggcatcggagcaacaccaggtct 700 |||||||||||||||||| | ||| | || ||| |||||||| |||||| | ||||| || Sbjct: 543 ttgttgaccttgctggacaaatggaacgaaaaagtttggcatgggagcagctccaggcct 484 Query: 701 cattccaggaa 711 ||||||||||| Sbjct: 483 cattccaggaa 473
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 261 agaacctcagtttggtccatctccaaaagcataccggtaaccttggcagc 310 ||||| ||||| ||||||||||||| ||||||||| ||||| |||||||| Sbjct: 59788 agaacttcagtctggtccatctccagaagcataccagtaactttggcagc 59739
>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence Length = 141776 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 261 agaacctcagtttggtccatctccaaaagcataccggtaaccttggcagc 310 ||||| ||||| ||||||||||||| ||||||||| ||||| |||||||| Sbjct: 2816 agaacttcagtctggtccatctccagaagcataccagtaactttggcagc 2767
>gb|AF190656.1|AF190656 Nicotiana tabacum clone 1 poly(A)-binding protein (PABP1) mRNA, partial cds Length = 1231 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcc 311 |||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 850 acctcagtctggtccatctccaagagcatgccagtcaccttggcagcc 803
>gb|AF190655.1|AF190655 Nicotiana tabacum poly(A)-binding protein (PABP) mRNA, complete cds Length = 2364 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 264 acctcagtttggtccatctccaaaagcataccggtaaccttggcagcc 311 |||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 1945 acctcagtctggtccatctccaagagcatgccagtcaccttggcagcc 1898
>gb|AY103944.1| Zea mays PCO133356 mRNA sequence Length = 2499 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Minus Query: 199 ggagaacctccatagcttcagcgaccttagacttcaaagcatcaggtgactcgattagat 258 ||||||| ||||| || ||||| ||||| ||||| | |||||||| ||||| | || | Sbjct: 2099 ggagaacatccatcgcctcagcaacctttgacttgagggcatcaggggactcaagcaggt 2040 Query: 259 gaagaacctcagtttggtccatctccaaaagcat 292 | || |||||||| || ||||||||||||||||| Sbjct: 2039 ggaggacctcagtctgatccatctccaaaagcat 2006
>gb|BT016789.1| Zea mays clone Contig622 mRNA sequence Length = 1208 Score = 48.1 bits (24), Expect = 0.041 Identities = 72/88 (81%) Strand = Plus / Minus Query: 223 ccttagacttcaaagcatcaggtgactcgattagatgaagaacctcagtttggtccatct 282 |||| ||||| | ||||||||| ||||||| || || || ||||| || || ||||||| Sbjct: 792 ccttggacttgagagcatcaggggactcgagcaggtggaggacctcggtctgatccatct 733 Query: 283 ccaaaagcataccggtaaccttggcagc 310 |||||||||| || || ||||| ||||| Sbjct: 732 ccaaaagcattccagtgacctttgcagc 705
>emb|Z69944.1|SPAC1F12 S.pombe chromosome I cosmid c1F12 Length = 14399 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 387 ttggcaagtgcagatgccaatgctccactagaaac 421 ||||||||| ||||||| || |||||||||||||| Sbjct: 5636 ttggcaagtccagatgctaacgctccactagaaac 5602
>ref|NM_001019752.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1F12.05), partial mRNA Length = 1134 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 387 ttggcaagtgcagatgccaatgctccactagaaac 421 ||||||||| ||||||| || |||||||||||||| Sbjct: 143 ttggcaagtccagatgctaacgctccactagaaac 109
>ref|NM_119572.3| Arabidopsis thaliana PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding AT4G34110 (PAB2) mRNA, complete cds Length = 2440 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 2110 tcagtctggtccatctccaaaagcat 2085 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 caccaggtctcattccaggaa 711 ||||||||||||||||||||| Sbjct: 1743 caccaggtctcattccaggaa 1723
>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence Length = 174202 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 cagagtctgaagcaccaagcac 80 |||||||||||||||||||||| Sbjct: 104103 cagagtctgaagcaccaagcac 104124
>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence Length = 213811 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 cagagtctgaagcaccaagcac 80 |||||||||||||||||||||| Sbjct: 163936 cagagtctgaagcaccaagcac 163915
>gb|AY080718.1| Arabidopsis thaliana putative poly(A)-binding protein (At4g34110) mRNA, partial cds Length = 2033 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 1718 tcagtctggtccatctccaaaagcat 1693 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 caccaggtctcattccaggaa 711 ||||||||||||||||||||| Sbjct: 1351 caccaggtctcattccaggaa 1331
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 173325 tcagtctggtccatctccaaaagcat 173300 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 caccaggtctcattccaggaa 711 ||||||||||||||||||||| Sbjct: 172772 caccaggtctcattccaggaa 172752
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project) Length = 94091 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 43276 tcagtctggtccatctccaaaagcat 43251 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 caccaggtctcattccaggaa 711 ||||||||||||||||||||| Sbjct: 42723 caccaggtctcattccaggaa 42703
>dbj|AK222061.1| Arabidopsis thaliana mRNA for poly(A)-binding protein, complete cds, clone: RAFL22-79-P19 Length = 624 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 322 tcagtctggtccatctccaaaagcat 297
>gb|AY030359.1| Anemia phyllitidis polyadenylated mRNA-binding protein 2 (Pab2) mRNA, partial cds Length = 1609 Score = 44.1 bits (22), Expect = 0.64 Identities = 70/86 (81%) Strand = Plus / Minus Query: 240 tcaggtgactcgattagatgaagaacctcagtttggtccatctccaaaagcataccggta 299 ||||| ||||| || || || |||||||| || |||||||| || | ||||||||| || Sbjct: 1292 tcaggcgactcaatgaggtgtagaacctctgtctggtccatttctagaagcatacccgtg 1233 Query: 300 accttggcagcctgatcatgctccag 325 || ||| | || |||||||||||||| Sbjct: 1232 actttgcccgcgtgatcatgctccag 1207
>emb|BX828392.1|CNS0A2YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 723 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 446 tcagtctggtccatctccaaaagcat 421
>emb|BX827355.1|CNS0A2W2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1567 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 1287 tcagtctggtccatctccaaaagcat 1262
>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone BACR48C05, complete sequence Length = 164450 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 367 gttgctgctccggcggagagttggca 392 ||||||||||||||||| |||||||| Sbjct: 75490 gttgctgctccggcggatagttggca 75465
>gb|BT002354.1| Arabidopsis thaliana clone C104970 putative polyadenylate-binding protein 2 (PABP2) (At4g34110) mRNA, complete cds Length = 1921 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 1766 tcagtctggtccatctccaaaagcat 1741 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 caccaggtctcattccaggaa 711 ||||||||||||||||||||| Sbjct: 1399 caccaggtctcattccaggaa 1379
>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the complete sequence Length = 217725 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 367 gttgctgctccggcggagagttggca 392 ||||||||||||||||| |||||||| Sbjct: 57201 gttgctgctccggcggatagttggca 57176
>gb|L19418.1|ATHPAB2A Arabidopsis thaliana poly(A)-binding protein mRNA, complete cds Length = 2427 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 tcagtttggtccatctccaaaagcat 292 ||||| |||||||||||||||||||| Sbjct: 2097 tcagtctggtccatctccaaaagcat 2072 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 caccaggtctcattccaggaa 711 ||||||||||||||||||||| Sbjct: 1730 caccaggtctcattccaggaa 1710
>gb|AC166800.5| Mus musculus chromosome 1, clone RP24-260I21, complete sequence Length = 162752 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tctgaagcaccaagcacatac 84 ||||||||||||||||||||| Sbjct: 144907 tctgaagcaccaagcacatac 144887
>gb|AC003034.1|HUAC003034 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-923A4, complete sequence Length = 82883 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 14810 agctggaacattggtcttctgctgc 14786
>gb|AC006024.1| Homo sapiens PAC clone RP5-1166G19 from 7, complete sequence Length = 90583 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 62724 agctggaacattggtcttctgctgc 62700
>gb|AC118728.12| Mus musculus chromosome 1, clone RP24-168F13, complete sequence Length = 176970 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tctgaagcaccaagcacatac 84 ||||||||||||||||||||| Sbjct: 75878 tctgaagcaccaagcacatac 75858
>emb|Z26042.1|HAPABP A.phyllitidis PABP mRNA for poly(A)-binding protein Length = 2409 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 288 agcataccggtaaccttggcagcctgatcatgctcca 324 ||||| || ||||||||| |||| ||||||||||||| Sbjct: 2035 agcattcctgtaaccttgccagcatgatcatgctcca 1999
>dbj|AK091978.1| Homo sapiens cDNA FLJ34659 fis, clone KIDNE2018863 Length = 1958 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 989 agctggaacattggtcttctgctgc 965
>gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chromosome 7, complete sequence Length = 154065 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 40665 agctggaacattggtcttctgctgc 40641
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 acggaatgcagcctcaggcat 517 ||||||||||||||||||||| Sbjct: 1062002 acggaatgcagcctcaggcat 1062022
>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence Length = 181174 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 580 ccattggcattggctgctgca 600 ||||||||||||||||||||| Sbjct: 62215 ccattggcattggctgctgca 62235
>gb|AC158334.1| Homo sapiens chromosome 7 clone WI2-3678I11, complete sequence Length = 30477 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 28588 agctggaacattggtcttctgctgc 28612
>gb|AC141053.2| Homo sapiens chromosome 16 clone CTD-3076M17, complete sequence Length = 98702 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 76044 agctggaacattggtcttctgctgc 76068 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 29437 agctggaacattggtcttctgctgc 29413
>gb|AC137056.3| Homo sapiens chromosome 16 clone CTD-2194A8, complete sequence Length = 131451 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 agctggaacattggtctgctgctgc 188 ||||||||||||||||| ||||||| Sbjct: 92157 agctggaacattggtcttctgctgc 92133
>gb|AC021072.27| Homo sapiens 12 BAC RP11-624J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55034 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 596 ctgcattccaccagcacctgc 616 ||||||||||||||||||||| Sbjct: 20554 ctgcattccaccagcacctgc 20574
>gb|AC154356.2| Mus musculus BAC clone RP23-189C20 from 13, complete sequence Length = 201031 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 580 ccattggcattggctgctgca 600 ||||||||||||||||||||| Sbjct: 197164 ccattggcattggctgctgca 197184
>ref|XM_481358.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 cccttggaaccatctgctgg 575 |||||||||||||||||||| Sbjct: 83 cccttggaaccatctgctgg 64
>gb|BC077186.1| Xenopus laevis MGC78848 protein, mRNA (cDNA clone MGC:78848 IMAGE:3402930), complete cds Length = 2085 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 602 tccaccagcacctgcacgcctccc 625 ||||||||||||||||||| |||| Sbjct: 321 tccaccagcacctgcacgcgtccc 298
>ref|XM_363902.1| Magnaporthe grisea 70-15 hypothetical protein (MG01828.4) partial mRNA Length = 1512 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 acctgcacgcctcccagatg 630 |||||||||||||||||||| Sbjct: 383 acctgcacgcctcccagatg 402
>gb|AF424439.1| Uncultured candidate division OP11 bacterium MERTZ_2CM_219 16S ribosomal RNA gene, partial sequence Length = 976 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 aaaactagagacttccagag 63 |||||||||||||||||||| Sbjct: 129 aaaactagagacttccagag 148
>gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome 6, complete sequence Length = 213811 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gtccatctccaaaagcatac 294 |||||||||||||||||||| Sbjct: 196146 gtccatctccaaaagcatac 196165
>gb|AC140265.2| Mus musculus BAC clone RP23-318B18 from chromosome 6, complete sequence Length = 178580 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 gtccatctccaaaagcatac 294 |||||||||||||||||||| Sbjct: 117673 gtccatctccaaaagcatac 117654
>gb|AY314773.1| Caenorhabditis elegans flamingo-like protein FMI-1 mRNA, complete cds Length = 7972 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acatacagtaaccaggaaca 98 |||||||||||||||||||| Sbjct: 3924 acatacagtaaccaggaaca 3905
>ref|XM_816516.1| Trypanosoma cruzi strain CL Brener poly(A)-binding protein (Tc00.1047053508461.140) partial mRNA Length = 1653 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 276 tccatctccaaaagcataccggtaaccttggcagcc 311 ||||||||||||||||| || || ||||| |||||| Sbjct: 1556 tccatctccaaaagcatgccagtcacctttgcagcc 1521
>gb|AC146480.2| Danio rerio clone CH211-40O9, complete sequence Length = 166906 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 gacttccagagtctgaagca 72 |||||||||||||||||||| Sbjct: 62189 gacttccagagtctgaagca 62170
>gb|AC126013.12| Medicago truncatula clone mth2-32e10, complete sequence Length = 116778 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ttccaactaagaagcaacaa 129 |||||||||||||||||||| Sbjct: 80155 ttccaactaagaagcaacaa 80174
>emb|AL136178.33| Human DNA sequence from clone RP11-67M3 on chromosome 13, complete sequence Length = 169541 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ttaaatctatttgaataaaa 47 |||||||||||||||||||| Sbjct: 129150 ttaaatctatttgaataaaa 129169
>emb|AL137851.12| Human DNA sequence from clone RP11-6H18 on chromosome 9p23-24.3 Contains a novel gene and part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 139182 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 agtctgaagcaccaagcaca 81 |||||||||||||||||||| Sbjct: 48608 agtctgaagcaccaagcaca 48627
>emb|Y09258.1|DMHISSEAC D.melanogaster mRNA for putative histone deacetylase Length = 2172 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctccggcggagagttggcaa 393 |||||||||||||||||||| Sbjct: 560 ctccggcggagagttggcaa 541
>gb|AC010665.6| Drosophila melanogaster 3L BAC RP98-23H9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156526 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctccggcggagagttggcaa 393 |||||||||||||||||||| Sbjct: 54576 ctccggcggagagttggcaa 54557
>gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete sequence Length = 139970 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttccaactaagaagcaacaa 129 |||||||||||||||||||| Sbjct: 102367 ttccaactaagaagcaacaa 102348
>ref|NM_139661.2| Drosophila melanogaster Rpd3 CG7471-RA (Rpd3), mRNA Length = 2145 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctccggcggagagttggcaa 393 |||||||||||||||||||| Sbjct: 563 ctccggcggagagttggcaa 544
>gb|AY058487.1| Drosophila melanogaster GM14158 full length cDNA Length = 2157 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctccggcggagagttggcaa 393 |||||||||||||||||||| Sbjct: 537 ctccggcggagagttggcaa 518
>ref|NM_073855.2| Caenorhabditis elegans F15B9.7 (cadherin) mRNA, complete cds Length = 7947 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acatacagtaaccaggaaca 98 |||||||||||||||||||| Sbjct: 3904 acatacagtaaccaggaaca 3885
>ref|NM_068217.3| Caenorhabditis elegans K08F11.3 (K08F11.3) mRNA, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 taaccttggcagcctgatca 317 |||||||||||||||||||| Sbjct: 853 taaccttggcagcctgatca 834
>gb|AC011301.9| Homo sapiens BAC clone RP11-299I20 from 2, complete sequence Length = 166424 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggtctgctgctgctgagcgctgc 198 ||||||||||||||||||| |||| Sbjct: 121813 tggtctgctgctgctgagctctgc 121790
>gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosome 12, complete sequence Length = 177886 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 agtctgaagcaccaagcacataca 85 ||||||||||||||||||| |||| Sbjct: 92880 agtctgaagcaccaagcacgtaca 92903
>emb|AL929558.13| Zebrafish DNA sequence from clone CH211-159N7, complete sequence Length = 170597 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 gacttccagagtctgaagca 72 |||||||||||||||||||| Sbjct: 62187 gacttccagagtctgaagca 62168
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_A03 Length = 168689 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 cccttggaaccatctgctgg 575 |||||||||||||||||||| Sbjct: 122055 cccttggaaccatctgctgg 122074
>gb|AF086715.1|AF086715 Drosophila melanogaster putative histone deacetylase (Rpd3) gene, complete cds Length = 2681 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctccggcggagagttggcaa 393 |||||||||||||||||||| Sbjct: 1048 ctccggcggagagttggcaa 1029
>emb|AL513422.2|HS527D15 Homo sapiens chromosome 9 BAC RP11-527D15, complete sequence Length = 166169 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 agtctgaagcaccaagcaca 81 |||||||||||||||||||| Sbjct: 113989 agtctgaagcaccaagcaca 114008
>emb|Z78018.1|CEW07G4 Caenorhabditis elegans Cosmid W07G4, complete sequence Length = 31001 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acatacagtaaccaggaaca 98 |||||||||||||||||||| Sbjct: 8266 acatacagtaaccaggaaca 8247
>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete sequence Length = 302417 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctccggcggagagttggcaa 393 |||||||||||||||||||| Sbjct: 1430 ctccggcggagagttggcaa 1411
>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence Length = 231142 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ctgctgctgctgagcgctgc 198 |||||||||||||||||||| Sbjct: 142835 ctgctgctgctgagcgctgc 142854
>gb|U11272.1|TCU11272 Trypanosoma cruzi clone 22 poly(A) binding protein mRNA, complete cds Length = 2103 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 276 tccatctccaaaagcataccggtaaccttggcagcc 311 ||||||||||||||||| || || ||||| |||||| Sbjct: 1792 tccatctccaaaagcatgccagtcacctttgcagcc 1757
>gb|U06070.1|TCU06070 Trypanosoma cruzi Tulahuen poly(A) binding protein mRNA, complete cds Length = 2013 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 276 tccatctccaaaagcataccggtaaccttggcagcc 311 ||||||||||||||||| || || ||||| |||||| Sbjct: 1704 tccatctccaaaagcatgccagtcacctttgcagcc 1669
>emb|BX276123.6| Mouse DNA sequence from clone RP23-220O6 on chromosome X, complete sequence Length = 84821 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 gacttccagagtctgaagcaccaa 76 ||||||||||||||||| |||||| Sbjct: 76325 gacttccagagtctgaaccaccaa 76348
>gb|AF026949.1|AF026949 Drosophila melanogaster putative histone deacetylase HDAC1 mRNA, complete cds Length = 2073 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctccggcggagagttggcaa 393 |||||||||||||||||||| Sbjct: 489 ctccggcggagagttggcaa 470
>gb|AF044733.1|AF044733 Trypanosoma cruzi clone B1k poly(A)-binding protein (PABP) gene, complete cds Length = 4292 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 276 tccatctccaaaagcataccggtaaccttggcagcc 311 ||||||||||||||||| || || ||||| |||||| Sbjct: 3916 tccatctccaaaagcatgccagtcacctttgcagcc 3881
>gb|AF044732.1|AF044732 Trypanosoma cruzi clone A6a poly(A)-binding protein (PABP) gene, complete cds Length = 6055 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 276 tccatctccaaaagcataccggtaaccttggcagcc 311 ||||||||||||||||| || || ||||| |||||| Sbjct: 2198 tccatctccaaaagcatgccagtcacctttgcagcc 2163 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,755,757 Number of Sequences: 3902068 Number of extensions: 6755757 Number of successful extensions: 134746 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134318 Number of HSP's gapped (non-prelim): 407 length of query: 727 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 704 effective length of database: 17,143,297,704 effective search space: 12068881583616 effective search space used: 12068881583616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
