ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34n04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12)... 347 2e-95
2MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12)... 263 4e-70
3MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12)... 169 1e-41
4MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12)... 157 3e-38
5EGFL7_HUMAN (Q9UHF1) EGF-like domain-containing protein 7 precur... 31 3.1
6SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs... 30 5.3
7CASC5_HUMAN (Q8NG31) Protein CASC5 (Cancer susceptibility candid... 30 5.3
8SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... 30 9.1

>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score =  347 bits (890), Expect = 2e-95
 Identities = 170/170 (100%), Positives = 170/170 (100%)
 Frame = -2

Query: 643  AGLDFGFLIMSDSSLVDTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKET 464
            AGLDFGFLIMSDSSLVDTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKET
Sbjct: 915  AGLDFGFLIMSDSSLVDTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKET 974

Query: 463  LKNRADQLIKMLESCGWDAVGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLR 284
            LKNRADQLIKMLESCGWDAVGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLR
Sbjct: 975  LKNRADQLIKMLESCGWDAVGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLR 1034

Query: 283  STGLCISSSGWTGVPDYCRFSFALESGDFDRAMECIARFRELVLGGGAKV 134
            STGLCISSSGWTGVPDYCRFSFALESGDFDRAMECIARFRELVLGGGAKV
Sbjct: 1035 STGLCISSSGWTGVPDYCRFSFALESGDFDRAMECIARFRELVLGGGAKV 1084



to top

>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1091

 Score =  263 bits (672), Expect = 4e-70
 Identities = 126/166 (75%), Positives = 150/166 (90%), Gaps = 1/166 (0%)
 Frame = -2

Query: 640  GLDFGFLIMSDSSLVDTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETL 461
            G DFGF+I+ DSSL +TF+SF SLSRPH+TLKYTF+KLLGLKNQKDQHFSDLI+EQKE L
Sbjct: 921  GHDFGFVILGDSSLAETFHSFSSLSRPHTTLKYTFKKLLGLKNQKDQHFSDLIVEQKEEL 980

Query: 460  KNRADQLIKMLESCGWDA-VGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLR 284
            KNRA+QLI+ LESCGW+A +GC GGISMLAKPTAY+GK+ K  GF+G+LD+ N+REA+LR
Sbjct: 981  KNRANQLIQTLESCGWEAAIGC-GGISMLAKPTAYMGKAFKAAGFDGELDASNIREAILR 1039

Query: 283  STGLCISSSGWTGVPDYCRFSFALESGDFDRAMECIARFRELVLGG 146
            +TGLCI+SS WTG+P YCRFSFALE G+F+RAM CIARF+ELVLGG
Sbjct: 1040 ATGLCINSSSWTGIPGYCRFSFALERGEFERAMGCIARFKELVLGG 1085



to top

>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1088

 Score =  169 bits (427), Expect = 1e-41
 Identities = 82/167 (49%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
 Frame = -2

Query: 640  GLDFGFLIMSDSSLVDTFYS-FPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKET 464
            GL +GFL++    L D+F S F  L++PH+T++YT +KLL L  QK  + +     Q++ 
Sbjct: 922  GLSYGFLVLKSGFLADSFRSSFSGLNKPHNTVRYTAKKLLELGEQKG-NLTGAAQGQEKL 980

Query: 463  LKNRADQLIKMLESCGWDAVGCHGGISMLAKPTAYIGKSLKV--DG--FEGKLDSHNMRE 296
            L  R  +L + LE+CGW+ +   GG+S++AKP+AY+GK++K+  DG  +  KLD  N+RE
Sbjct: 981  LATRLKRLKETLENCGWEVIEARGGVSVIAKPSAYLGKNIKLEKDGSTWVTKLDGTNIRE 1040

Query: 295  ALLRSTGLCISSSGWTGVPDYCRFSFALESGDFDRAMECIARFRELV 155
            A+LR+TGLCI+   WTG+PDYCRF+FALE GDFDRA++CI +F +LV
Sbjct: 1041 AMLRATGLCINGPSWTGIPDYCRFTFALEDGDFDRALDCIVKFNQLV 1087



to top

>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1071

 Score =  157 bits (397), Expect = 3e-38
 Identities = 73/165 (44%), Positives = 113/165 (68%), Gaps = 4/165 (2%)
 Frame = -2

Query: 637  LDFGFLIMSDSSLVDTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETLK 458
            +  GFL++ D SL+D F++ P LS+PHST+KY  +K+L LK +K   F D + E  +TL+
Sbjct: 906  IKLGFLVL-DQSLIDAFHTLPGLSKPHSTVKYAAKKMLALKEEKASDFLDAVSETIKTLE 964

Query: 457  NRADQLIKMLESCGWDAVGCHGGISMLAKPTAYIGKSLKVDGFEG----KLDSHNMREAL 290
             R+ +L ++L++ GW+ +    GISM+AKP AY+ K +K+   +G    +L   NMR+  
Sbjct: 965  GRSRRLKEVLQNSGWEVIQPSAGISMVAKPKAYLNKKVKLKAGDGQEIVELTDSNMRDVF 1024

Query: 289  LRSTGLCISSSGWTGVPDYCRFSFALESGDFDRAMECIARFRELV 155
            L  TG+C++S  WTG+P YCRFSFALE  +FD+A+E IA+F+ ++
Sbjct: 1025 LSHTGVCLNSGSWTGIPGYCRFSFALEDSEFDKAIESIAQFKSVL 1069



to top

>EGFL7_HUMAN (Q9UHF1) EGF-like domain-containing protein 7 precursor (Multiple|
           EGF-like domain protein 7) (Multiple epidermal growth
           factor-like domain protein 7) (Vascular endothelial
           statin) (VE-statin) (NOTCH4-like protein) (ZNEU1)
          Length = 273

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 24/64 (37%), Positives = 29/64 (45%)
 Frame = +1

Query: 202 RRSPEQS*SGSSPAPLSTRCC*CTARWTSGGLPSCCGCPACPQSRPP*AICQCRRSVLQA 381
           RRSP     G +PA     CC    R  + GLP  CG   C   +PP   C+   S +Q 
Sbjct: 74  RRSP-----GLAPARPRYACCPGWKR--TSGLPGACGAAIC---QPP---CRNGGSCVQP 120

Query: 382 SRCR 393
            RCR
Sbjct: 121 GRCR 124



to top

>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 40/170 (23%), Positives = 52/170 (30%), Gaps = 11/170 (6%)
 Frame = +1

Query: 124 CYHSP*HRHQGPAP*TGRCTP-WPGRSRRSPEQS*SGSSPAPLSTRCC*CTARWTSGGLP 300
           C H   H   G      RC P W G    S     S +S     T  C C   W      
Sbjct: 150 CQHGTCHPRSGAC----RCEPGWWGAQCASACYC-SATSRCDPQTGACLCHVGWWGRSCN 204

Query: 301 SCCGCPACPQSRPP*AICQCRRSVLQA-----SRCRHGXXXXXXXXXXXXXXTGRHDSST 465
           + C C + P  +     CQCR  +  A      +C HG                    + 
Sbjct: 205 NQCACNSSPCEQQS-GRCQCRERMFGARCDRYCQCSHGRCHPVDGT-----------CAC 252

Query: 466 SPSAQG*DQRNADPSGS*DPTAS*KC-----TSTCCVADSSLGNCKMCQP 600
            P  +G   R   P+G   P    +C        C V +   G C  C+P
Sbjct: 253 DPGYRGKYCREPCPAGFYGPGCRRRCGQCKGQQPCTVVE---GRCLTCEP 299



to top

>CASC5_HUMAN (Q8NG31) Protein CASC5 (Cancer susceptibility candidate gene 5|
            protein) (ALL1-fused gene from chromosome 15q14)
            (AF15q14) (D40/AF15q14 protein)
          Length = 2342

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 535  RKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCGWDAV 404
            R LL L+ QK+Q  + +   QK+  +NR ++L+  L    WD V
Sbjct: 2097 RNLLELEVQKEQTLAQIDFMQKQ--RNRTEELLDQLSLSEWDVV 2138



to top

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
 Frame = +1

Query: 124 CYHSP*HRHQGPAP*TGRCTP-WPGRSRRSPEQS*SGSSPAPLSTRCC*CTARWTSGGLP 300
           C H   H   G      RC P W G    S     S +S     T  C C A W      
Sbjct: 158 CQHGTCHPRSGAC----RCEPGWWGAQCASACYC-SATSRCDPQTGACLCHAGWWGRSCN 212

Query: 301 SCCGCPACPQSRPP*AICQCRRSVLQASRC 390
           + C C + P  +     CQCR     A RC
Sbjct: 213 NQCACNSSPCEQQS-GRCQCRERTFGA-RC 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,729,150
Number of Sequences: 219361
Number of extensions: 1753593
Number of successful extensions: 5541
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5530
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top