| Clone Name | rbags35b21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X58279.1|TAHSP173 T.aestivum mRNA for heat shock protein 17.3 Length = 719 Score = 464 bits (234), Expect = e-127 Identities = 280/293 (95%), Gaps = 3/293 (1%) Strand = Plus / Minus Query: 83 tcacactctgcttcgattcgacgcgcacacgatgcgtctcaggcgacctggacctggatg 142 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 559 tcacactctgattcgattcgacgcgcacacgatgcatctcaggcgacctggacctggatg 500 Query: 143 gtcttgggcttcttgggctcgggcggcggcagcttctcgacggtgacggtgagcacgccg 202 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 499 gtcttgggcttcttgggctcgggcggcggcagcttgtcgacggtcacggtgagcacgccg 440 Query: 203 tcgcggcacgcggcggagatcttctccatgtcggcgttctcggggagcacgaacttgcgc 262 |||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 439 tcgcggcacg--gcg-agatcttctccatgtcggcgttctccggcagcacgaacttgcgc 383 Query: 263 atcagcttgcccatgcggcgctccatccgcacgaacttggcgtcctccttctcctccctg 322 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 382 atcagcttgcccatgcggcgctccatccgcaggtacttggcgtcctccttctcctccctc 323 Query: 323 cgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgat 375 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 322 cgccgctcgccgctgatcaccagcacccgctcgtcctccacctgcaccttgat 270 Score = 81.8 bits (41), Expect = 1e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 1 cgaacagacagtacacaccctctctctcagataaccatgctactagcaggcgaaatcagg 60 |||||||||||||||||||||||| ||||||||||||| ||||||| || ||||||| Sbjct: 663 cgaacagacagtacacaccctctccctcagataaccatactactagtagatgaaatcaaa 604 Query: 61 agacagacactcc 73 |||||||||||| Sbjct: 603 ggacagacactcc 591
>gb|AF350423.1|AF350423 Triticum aestivum small heat shock protein HSP17.8 mRNA, complete cds Length = 611 Score = 452 bits (228), Expect = e-124 Identities = 273/288 (94%) Strand = Plus / Minus Query: 88 ctctgcttcgattcgacgcgcacacgatgcgtctcaggcgacctggacctggatggtctt 147 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 535 ctctgcttcgattcgacgcgcacacgatacatctcaggcgacctggacctggatggtctt 476 Query: 148 gggcttcttgggctcgggcggcggcagcttctcgacggtgacggtgagcacgccgtcgcg 207 ||||||||||| |||||||||||||||||||| | || ||||||||||||||||||||| Sbjct: 475 gggcttcttggtttcgggcggcggcagcttctccaaggagacggtgagcacgccgtcgcg 416 Query: 208 gcacgcggcggagatcttctccatgtcggcgttctcggggagcacgaacttgcgcatcag 267 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gcacacggcggagatcttctccatgtcggcgttctcggggagcacgaacttgcgcatcat 356 Query: 268 cttgcccatgcggcgctccatccgcacgaacttggcgtcctccttctcctccctgcgccg 327 |||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||| Sbjct: 355 cttgcccatgcggcgctccatccgcaggtacttggcgtcctccttctcctccctccgccg 296 Query: 328 ctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgat 375 |||||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 295 ctcgccgctgatcaccaacacgcgctcgtcctccacctgcaccttgat 248
>gb|DQ172835.1| Dactylis glomerata Hsp17.2 mRNA, complete cds Length = 882 Score = 329 bits (166), Expect = 4e-87 Identities = 234/254 (92%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 123 aggcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttctcga 182 |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 545 aggcaacctgaacctggatggtcttgggcttcttgggctcggggggcggcagcttctcca 486 Query: 183 cggtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgttct 242 | | || |||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 485 cagacaccgtgagcacgccgtcgcgggacacggcggagatcttctccatgtcggcgttct 426 Query: 243 cggggagcacgaacttgcgcatcagcttgcccatgcggcgct-ccatccgcacgaacttg 301 | || ||||||||||||||||| |||||| |||| ||||||| ||||||||| | ||||| Sbjct: 425 caggcagcacgaacttgcgcatgagcttg-ccatccggcgctcccatccgcaggtacttg 367 Query: 302 gcgtcctccttctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcctcc 361 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 366 gcgtcctccttctcctccctgcggcgctcgccgctgatcaccagcacccgctcgtcctcc 307 Query: 362 acctgcaccttgat 375 |||||||||||||| Sbjct: 306 acctgcaccttgat 293
>emb|X54076.1|ZMHSP18K2 Maize mRNA for an 18kDa heat shock protein Length = 843 Score = 309 bits (156), Expect = 3e-81 Identities = 231/256 (90%) Strand = Plus / Minus Query: 120 ctcaggcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttct 179 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 598 ctcaggcgaccttgacctcgatggtcttgggcttcttgggctcgggcgggggcagcttct 539 Query: 180 cgacggtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgt 239 ||||||| ||||||||||||||||| | |||| | || |||||||| ||||||||||||| Sbjct: 538 cgacggtcacggtgagcacgccgtccctgcacaccgccgagatcttgtccatgtcggcgt 479 Query: 240 tctcggggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgcacgaact 299 | || || ||||||||||||||||| | ||||||||| || |||||||| |||| | ||| Sbjct: 478 tgtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtact 419 Query: 300 tggcgtcctccttctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcct 359 |||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 418 tggcgtcctcgcgctcctcccggcgccgctcgccgctgatcaccagcacccgctcgtcct 359 Query: 360 ccacctgcaccttgat 375 |||||||||||||||| Sbjct: 358 ccacctgcaccttgat 343
>gb|BT016317.1| Zea mays clone Contig150 mRNA sequence Length = 925 Score = 301 bits (152), Expect = 8e-79 Identities = 230/256 (89%) Strand = Plus / Minus Query: 120 ctcaggcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttct 179 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 605 ctcaggcgaccttgacctcgatggtcttgggcttcttgggctcgggcgggggcagcttct 546 Query: 180 cgacggtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgt 239 ||||||| ||||||||||||||||| | |||| | || |||||||| ||||||||||||| Sbjct: 545 cgacggtcacggtgagcacgccgtccctgcacaccgccgagatcttgtccatgtcggcgt 486 Query: 240 tctcggggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgcacgaact 299 | || || ||||||||||||||||| | ||||||||| || |||||||| |||| | ||| Sbjct: 485 tgtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtact 426 Query: 300 tggcgtcctccttctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcct 359 |||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 425 tggcgtcctcgcgctcctcccggcgccgctcgccgctgatcaccagcacccgctcgtcct 366 Query: 360 ccacctgcaccttgat 375 | |||||||||||||| Sbjct: 365 caacctgcaccttgat 350
>gb|AY103645.1| Zea mays PCO150910 mRNA sequence Length = 858 Score = 283 bits (143), Expect = 2e-73 Identities = 224/251 (89%) Strand = Plus / Minus Query: 120 ctcaggcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttct 179 |||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 595 ctcaggcgaccttgacctcgatggtcttgggtttcttgggctcgggcgggggcagcttct 536 Query: 180 cgacggtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgt 239 ||||||| ||||||||||||||||| | |||| | || |||||||| ||||||||||||| Sbjct: 535 cgacggtcacggtgagcacgccgtccctgcacaccgccgagatcttgtccatgtcggcgt 476 Query: 240 tctcggggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgcacgaact 299 | || || ||||||||||||||||| | ||||||||| || |||||||| |||| | ||| Sbjct: 475 tgtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtact 416 Query: 300 tggcgtcctccttctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcct 359 |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 415 tggcgtcctcgcgctcctcccggcgccgctcgccgctgaccaccagcacccgctcgtcct 356 Query: 360 ccacctgcacc 370 ||||||||||| Sbjct: 355 ccacctgcacc 345
>gb|S59777.1| HSP18=18 kda heat shock protein {microsporogenesis-specific} [Zea mays, Oh43, clone cMHSP18-1, mRNA, 790 nt] Length = 790 Score = 254 bits (128), Expect = 2e-64 Identities = 224/256 (87%) Strand = Plus / Minus Query: 120 ctcaggcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttct 179 |||||||||||| | || |||||||||||||||||||||||| ||||| |||||||||| Sbjct: 524 ctcaggcgaccttaatctcgatggtcttgggcttcttgggctccggcgggggcagcttct 465 Query: 180 cgacggtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgt 239 ||||||| || |||||||||||||| | |||| |||||| || ||| |||| |||||||| Sbjct: 464 cgacggtcaccgtgagcacgccgtccctgcacacggcggcgaccttgtccacgtcggcgt 405 Query: 240 tctcggggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgcacgaact 299 | || || ||||||||||||||||| | ||||||||| || |||||||| |||| | ||| Sbjct: 404 tgtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtact 345 Query: 300 tggcgtcctccttctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcct 359 |||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct: 344 tggcgtcctcgcgctcctcccggcggcgctcgccgctgatcaccagcacccgctcgtcct 285 Query: 360 ccacctgcaccttgat 375 ||||||||||| |||| Sbjct: 284 ccacctgcaccctgat 269
>emb|X54075.1|ZMHSP18K1 Maize mRNA for an 18kDa heat shock protein Length = 982 Score = 238 bits (120), Expect = 1e-59 Identities = 221/254 (87%), Gaps = 3/254 (1%) Strand = Plus / Minus Query: 120 ctcaggcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttct 179 |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||| Sbjct: 735 ctcaggcgaccttgacctcgatggtcttgggcttcttgggctccggcgggggcagcttct 676 Query: 180 cgacggtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgt 239 | ||||| || |||||||||||||| | |||| |||||| || ||| || | |||||||| Sbjct: 675 caacggtcaccgtgagcacgccgtccctgcacacggcggcgaccttgtcgacgtcggcgt 616 Query: 240 tctcggggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgcacgaact 299 | || || ||||||||||||||||| | ||||||||| || |||||||| |||| | ||| Sbjct: 615 tgtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtact 556 Query: 300 tggcgtcctcct---tctcctccctgcgccgctcgccgctgatgaccagcacccgctcgt 356 ||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 555 tggcgtcgtcctcgcgctcctcccggcgccgctcgccgctgaccaccagcacccgctcgt 496 Query: 357 cctccacctgcacc 370 |||||||||||||| Sbjct: 495 cctccacctgcacc 482
>gb|BT016978.1| Zea mays clone EK07D2303G05.c mRNA sequence Length = 821 Score = 230 bits (116), Expect = 3e-57 Identities = 221/256 (86%) Strand = Plus / Plus Query: 120 ctcaggcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttct 179 |||||||||||| | || |||||||||||||||||||||||| ||||| |||||||||| Sbjct: 277 ctcaggcgaccttaatctcgatggtcttgggcttcttgggctccggcgggggcagcttct 336 Query: 180 cgacggtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgt 239 ||||||| || |||||||||||||| | |||| |||||| || ||| |||| |||||||| Sbjct: 337 cgacggtcaccgtgagcacgccgtccctgcacacggcggcgaccttgtccacgtcggcgt 396 Query: 240 tctcggggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgcacgaact 299 | || || ||||||||||||||||| | ||||||||| || |||||||| |||| | ||| Sbjct: 397 tgtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtact 456 Query: 300 tggcgtcctccttctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcct 359 |||||||||| |||||||| | | |||||||||||||| ||||||||||| ||| ||| Sbjct: 457 tggcgtcctcgcgctcctcccgggggcgctcgccgctgatcaccagcacccggtcggcct 516 Query: 360 ccacctgcaccttgat 375 ||||||||||| |||| Sbjct: 517 ccacctgcaccctgat 532
>ref|XM_550428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 809 Score = 216 bits (109), Expect = 4e-53 Identities = 154/169 (91%) Strand = Plus / Minus Query: 125 gcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttctcgacg 184 ||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 585 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 526 Query: 185 gtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgttctcg 244 |||||||||||||||||||| ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 525 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 466 Query: 245 gggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgca 293 |||||||||||||||||||| | ||||||||| || ||||||||||||| Sbjct: 465 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgca 417 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 323 cgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgat 375 |||||||| |||||||| ||||||| || ||| |||||||||||||||||||| Sbjct: 372 cgccgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgat 320
>gb|DQ180746.1| Oryza sativa (japonica cultivar-group) class II small heat shock protein mRNA, complete cds Length = 784 Score = 216 bits (109), Expect = 4e-53 Identities = 154/169 (91%) Strand = Plus / Minus Query: 125 gcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttctcgacg 184 ||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 560 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 501 Query: 185 gtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgttctcg 244 |||||||||||||||||||| ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 500 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 441 Query: 245 gggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgca 293 |||||||||||||||||||| | ||||||||| || ||||||||||||| Sbjct: 440 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgca 392 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 323 cgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgat 375 |||||||| |||||||| ||||||| || ||| |||||||||||||||||||| Sbjct: 347 cgccgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgat 295
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 216 bits (109), Expect = 4e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 125 gcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttctcgacg 184 ||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 4448294 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 4448353 Query: 185 gtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgttctcg 244 |||||||||||||||||||| ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 4448354 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 4448413 Query: 245 gggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgca 293 |||||||||||||||||||| | ||||||||| || ||||||||||||| Sbjct: 4448414 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgca 4448462 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 323 cgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgat 375 |||||||| |||||||| ||||||| || ||| |||||||||||||||||||| Sbjct: 4448507 cgccgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgat 4448559 Score = 52.0 bits (26), Expect = 0.001 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcacct 371 |||||||||| ||||||||||||||||| ||||| |||| |||||||||||| ||||| Sbjct: 1933501 ctcctccctggcgcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccacct 1933443 Query: 372 tg 373 || Sbjct: 1933442 tg 1933441 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 gctcgggcggcggcagcttctcgacggtgacggtga 194 ||||||||||||||||||||| |||| |||||||| Sbjct: 1314451 gctcgggcggcggcagcttcttgacgtggacggtga 1314416 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 1951444 acggtgacggtgagcacgccgt 1951423 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 1943528 acggtgacggtgagcacgccgt 1943549 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 cgacggtgacggtgagcacgccgtc 204 ||||||||||||||||| ||||||| Sbjct: 34135231 cgacggtgacggtgagctcgccgtc 34135207
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 216 bits (109), Expect = 4e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 125 gcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttctcgacg 184 ||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 108376 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 108435 Query: 185 gtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgttctcg 244 |||||||||||||||||||| ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 108436 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 108495 Query: 245 gggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgca 293 |||||||||||||||||||| | ||||||||| || ||||||||||||| Sbjct: 108496 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgca 108544 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 323 cgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgat 375 |||||||| |||||||| ||||||| || ||| |||||||||||||||||||| Sbjct: 108589 cgccgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgat 108641
>dbj|AK071240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085O10, full insert sequence Length = 809 Score = 208 bits (105), Expect = 9e-51 Identities = 153/169 (90%) Strand = Plus / Minus Query: 125 gcgacctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttctcgacg 184 ||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 585 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 526 Query: 185 gtgacggtgagcacgccgtcgcggcacgcggcggagatcttctccatgtcggcgttctcg 244 |||||||||||||||||||| ||||| ||||||||||||| || | ||| ||||| ||| Sbjct: 525 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtctgcgttgtcg 466 Query: 245 gggagcacgaacttgcgcatcagcttgcccatgcggcgctccatccgca 293 |||||||||||||||||||| | ||||||||| || ||||||||||||| Sbjct: 465 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgca 417 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 323 cgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgat 375 |||||||| |||||||| ||||||| || ||| |||||||||||||||||||| Sbjct: 372 cgccgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgat 320
>ref|XM_464666.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 149 ggcttcttgggctcgggcggcggcagcttctcgacggtgacggtgagcacgccgtc 204 |||||||||||||| || |||||| ||| |||||||||||||||||||| ||||| Sbjct: 470 ggcttcttgggctccggtggcggcttcttgtcgacggtgacggtgagcaccccgtc 415
>gb|AY261671.1| Citrus x paradisi HSP19 class II mRNA, partial cds Length = 407 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 140 atggtcttgggcttcttgggctcgggcggcggcagcttctcgac 183 ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 281 atggtcttgggcttcttgggctccggcggtggcagcttatcgac 238
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 149 ggcttcttgggctcgggcggcggcagcttctcgacggtgacggtgagcacgccgtc 204 |||||||||||||| || |||||| ||| |||||||||||||||||||| ||||| Sbjct: 6586696 ggcttcttgggctccggtggcggcttcttgtcgacggtgacggtgagcaccccgtc 6586751 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 tcctccttctcctccctgcgccgct 329 ||||||| ||||||||||||||||| Sbjct: 32631355 tcctcctcctcctccctgcgccgct 32631379
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 149 ggcttcttgggctcgggcggcggcagcttctcgacggtgacggtgagcacgccgtc 204 |||||||||||||| || |||||| ||| |||||||||||||||||||| ||||| Sbjct: 21071 ggcttcttgggctccggtggcggcttcttgtcgacggtgacggtgagcaccccgtc 21126
>emb|Z29554.1|HA179HSP H.annuus (Sunweed) mRNA for 17.9 kDa heat-shock protein Length = 824 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 128 acctggacctggatggtcttgggcttcttgggctcgggcggcggcagcttctc 180 ||||| ||||| || ||||| |||||||||||||| ||||| ||||||||||| Sbjct: 505 acctgcacctgaatcgtcttcggcttcttgggctcaggcggaggcagcttctc 453
>ref|XM_472644.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 312 tctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 370 ||||||||| ||||||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 364 tctcctcccgccgccgctcgccgctgatccgcagcacccggttgtcctccacctccacc 306
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 312 tctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 370 ||||||||| ||||||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 22177122 tctcctcccgccgccgctcgccgctgatccgcagcacccggttgtcctccacctccacc 22177064
>dbj|AK063700.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G08, full insert sequence Length = 931 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 312 tctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 370 ||||||||| ||||||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 473 tctcctcccgccgccgctcgccgctgatcctcagcacccggttgtcctccacctccacc 415
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 312 tctcctccctgcgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 370 ||||||||| ||||||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 46983 tctcctcccgccgccgctcgccgctgatccgcagcacccggttgtcctccacctccacc 46925
>ref|NM_184281.2| Oryza sativa (japonica cultivar-group), mRNA Length = 808 Score = 52.0 bits (26), Expect = 0.001 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcacct 371 |||||||||| ||||||||||||||||| ||||| |||| |||||||||||| ||||| Sbjct: 385 ctcctccctggcgcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccacct 327 Query: 372 tg 373 || Sbjct: 326 tg 325
>gb|AY242075.1| Carica papaya 17.7 kDa heat shock protein mRNA, complete cds Length = 572 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 143 gtcttgggcttcttgggctcgggcggcggcagcttctcgacggtgacggt 192 ||||| |||||||||||||| || ||||||| ||||| ||| |||||||| Sbjct: 512 gtcttaggcttcttgggctccggtggcggcaacttctggacagtgacggt 463
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 52.0 bits (26), Expect = 0.001 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcacct 371 |||||||||| ||||||||||||||||| ||||| |||| |||||||||||| ||||| Sbjct: 174883 ctcctccctggcgcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccacct 174825 Query: 372 tg 373 || Sbjct: 174824 tg 174823
>dbj|AK063681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E07, full insert sequence Length = 808 Score = 52.0 bits (26), Expect = 0.001 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcacct 371 |||||||||| ||||||||||||||||| ||||| |||| |||||||||||| ||||| Sbjct: 385 ctcctccctggcgcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccacct 327 Query: 372 tg 373 || Sbjct: 326 tg 325
>gb|AF159562.1|AF159562 Prunus dulcis cytosolic class II low molecular weight heat shock protein (hsp17.5) mRNA, complete cds Length = 780 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 140 atggtcttgggcttcttgggctcgggcggcggcagcttctc 180 |||||||||| |||||| ||||| ||||| ||||||||||| Sbjct: 542 atggtcttggacttctttggctcaggcggaggcagcttctc 502
>ref|XM_549969.1| Oryza sativa (japonica cultivar-group), mRNA Length = 210 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 gctcgggcggcggcagcttctcgacggtgacggtga 194 ||||||||||||||||||||| |||| |||||||| Sbjct: 184 gctcgggcggcggcagcttcttgacgtggacggtga 149
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgtcg 205 |||||||||||||||||||||||| Sbjct: 128890 acggtgacggtgagcacgccgtcg 128913
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgtcg 205 |||||||||||||||||||||||| Sbjct: 46463 acggtgacggtgagcacgccgtcg 46440
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgtcg 205 |||||||||||||||||||||||| Sbjct: 7669804 acggtgacggtgagcacgccgtcg 7669827
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 gctcgggcggcggcagcttctcgacggtgacggtga 194 ||||||||||||||||||||| |||| |||||||| Sbjct: 12502 gctcgggcggcggcagcttcttgacgtggacggtga 12467
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 gctcgggcggcggcagcttctcgacggtgacggtga 194 ||||||||||||||||||||| |||| |||||||| Sbjct: 108105 gctcgggcggcggcagcttcttgacgtggacggtga 108070
>dbj|AK107883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D09, full insert sequence Length = 744 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgtcg 205 |||||||||||||||||||||||| Sbjct: 562 acggtgacggtgagcacgccgtcg 539
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgtcg 205 |||||||||||||||||||||||| Sbjct: 7739891 acggtgacggtgagcacgccgtcg 7739914
>emb|X13431.1|TAHSPLW Wheat mRNA for putative low molecular weight heat shock protein Length = 741 Score = 46.1 bits (23), Expect = 0.081 Identities = 50/59 (84%) Strand = Plus / Minus Query: 316 ctccctgcgccgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttga 374 |||||||| |||||||||||||| ||| ||||| |||||||||||| |||||||| Sbjct: 339 ctccctgctccgctcgccgctgacgacgagcacgttgccgtcctccacctccaccttga 281 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 476 acggtgacggtgagcacgccgt 455
>gb|AY098528.1| Ananas comosus class-1 LMW heat shock protein mRNA, complete cds Length = 911 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 181 gacggtgacggtgagcacgccgt 203 ||||||||||||||||||||||| Sbjct: 505 gacggtgacggtgagcacgccgt 483
>ref|XM_511562.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 3000004C01 (LOC454742), mRNA Length = 3146 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 232 accagcacccgctcgtccaccacctg 207
>ref|XM_462738.2| Oryza sativa (japonica cultivar-group), mRNA Length = 754 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 517 acggtgacggtgagcacgccgt 496
>ref|XM_462736.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 395 acggtgacggtgagcacgccgt 374
>ref|NM_187470.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 431 acggtgacggtgagcacgccgt 410
>ref|NM_187469.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 410 acggtgacggtgagcacgccgt 389
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 8807648 acggtgacggtgagcacgccgt 8807627 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 8806241 acggtgacggtgagcacgccgt 8806262 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 8810359 acggtgacggtgagcacgcc 8810378
>emb|X94193.1|PGHSP179 P.glaucum mRNA for heat shock protein, HSP 17.9 Length = 807 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 505 acggtgacggtgagcacgccgt 484 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 235 ggcgttctcggggagcacgaacttgcgcatcagcttgcccatgcggcgctcca 287 |||||||||||||||| |||| ||||||| | |||||| ||| |||||||| Sbjct: 452 ggcgttctcggggagccggaacctgcgcatgaacttgccgctgctgcgctcca 400
>emb|X60820.1|OSLMWHSP O.sativa mRNA for 16.9 kD low molecular weight heat shock protein Length = 806 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 515 acggtgacggtgagcacgccgt 494
>dbj|AK055862.1| Homo sapiens cDNA FLJ31300 fis, clone LIVER1000067, weakly similar to UROCANATE HYDRATASE (EC 4.2.1.49) Length = 3127 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 agcacccgctcgtcctccacct 365 |||||||||||||||||||||| Sbjct: 2041 agcacccgctcgtcctccacct 2020
>ref|XM_941435.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 4 (LOC146909), mRNA Length = 3238 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_945204.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 6 (LOC146909), mRNA Length = 3011 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_945202.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 5 (LOC146909), mRNA Length = 1678 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_929923.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 2 (LOC146909), mRNA Length = 3238 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_085634.7| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 1 (LOC146909), mRNA Length = 3011 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_934078.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 3 (LOC146909), mRNA Length = 1678 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|NM_144639.1| Homo sapiens urocanase domain containing 1 (UROC1), mRNA Length = 3127 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 agcacccgctcgtcctccacct 365 |||||||||||||||||||||| Sbjct: 2041 agcacccgctcgtcctccacct 2020
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 50801 acggtgacggtgagcacgccgt 50780 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 49394 acggtgacggtgagcacgccgt 49415 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 53512 acggtgacggtgagcacgcc 53531
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 8805483 acggtgacggtgagcacgccgt 8805462 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 8804076 acggtgacggtgagcacgccgt 8804097 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 8808194 acggtgacggtgagcacgcc 8808213
>gb|AC015936.14| Homo sapiens chromosome 17, clone CTD-2534I21, complete sequence Length = 203401 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 accagcacccgctcgtcctccacctg 366 |||||||||||||||||| ||||||| Sbjct: 110550 accagcacccgctcgtccaccacctg 110575
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 14022 acggtgacggtgagcacgccgt 14001 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 6106 acggtgacggtgagcacgccgt 6127
>dbj|AB075869.1| Homo sapiens mRNA for putative protein product of HMFN0320, partial cds Length = 2743 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 agcacccgctcgtcctccacct 365 |||||||||||||||||||||| Sbjct: 2223 agcacccgctcgtcctccacct 2202
>gb|M80186.1|RICLMWHSP Oryza sativa LMW heat shock protein mRNA, complete CDS Length = 801 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 491 acggtgacggtgagcacgccgt 470
>dbj|AK121025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A14, full insert sequence Length = 753 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 516 acggtgacggtgagcacgccgt 495
>dbj|AK119717.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F11, full insert sequence Length = 750 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 503 acggtgacggtgagcacgccgt 482
>dbj|AK119243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B05, full insert sequence Length = 753 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 503 acggtgacggtgagcacgccgt 482
>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216161 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 344 agcacccgctcgtcctccacct 365 |||||||||||||||||||||| Sbjct: 42996 agcacccgctcgtcctccacct 43017
>gb|U83669.1|OSU83669 Oryza sativa low molecular mass heat shock protein Oshsp17.3 (OSHSP17.3) gene, complete cds Length = 1300 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 870 acggtgacggtgagcacgccgt 849
>dbj|D12635.1|RICYLMWHSP Oryza sativa (japonica cultivar-group) mRNA for low molecular weight heat shock protein, complete cds Length = 690 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 435 acggtgacggtgagcacgccgt 414
>gb|AF007762.1| Agrostis stolonifera var. palustris heat shock protein 16.5 (ApHSP16.5) mRNA, complete cds Length = 724 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 483 acggtgacggtgagcacgccgt 462
>gb|U81385.1|OSU81385 Oryza sativa heat shock protein (Oshsp16.9C) gene, complete cds Length = 1811 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 917 acggtgacggtgagcacgccgt 896
>gb|L14444.1|WHTHSP169C Triticum aestivum heat shock protein 16.9C (hsp16.9C) mRNA, 3' end Length = 1014 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 338 acggtgacggtgagcacgccgt 317
>gb|M80939.1|RICHSEB Oryza sativa 16.9 kDa heat shock protein gene, complete cds Length = 3349 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 2149 acggtgacggtgagcacgccgt 2128
>gb|M80938.1|RICHSEA Oryza sativa 16.9 kDa heat shock protein gene, complete cds Length = 2504 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgccgt 203 |||||||||||||||||||||| Sbjct: 2190 acggtgacggtgagcacgccgt 2169
>ref|NM_117608.1| Arabidopsis thaliana actin binding AT4G15200 mRNA, complete cds Length = 1803 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 gctcgtcctccacctgcacct 371 ||||||||||||||||||||| Sbjct: 880 gctcgtcctccacctgcacct 900
>ref|XM_468027.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 tcctccttctcctccctgcgccgct 329 ||||||| ||||||||||||||||| Sbjct: 552 tcctcctcctcctccctgcgccgct 528
>ref|NM_197609.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0001O14.2), mRNA Length = 682 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 gcacgaacttggcgtcctccttctcctcc 319 |||||||||||| |||||||| ||||||| Sbjct: 251 gcacgaacttggagtcctcctcctcctcc 223
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 gcggcagcttctcgacggtgacggt 192 ||||||||||||||||| ||||||| Sbjct: 1773410 gcggcagcttctcgacgttgacggt 1773386
>ref|NM_190981.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 cgacggtgacggtgagcacgccgtc 204 ||||||||||||||||| ||||||| Sbjct: 127 cgacggtgacggtgagctcgccgtc 103
>gb|DQ443370.1| Bombyx mori heat shock protein 1 mRNA, complete cds Length = 869 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gtgacggtgagcacgccgtcg 205 ||||||||||||||||||||| Sbjct: 514 gtgacggtgagcacgccgtcg 494
>emb|X65725.1|ZMHSP172 Z.mays mRNA for heat shock protein 17.2 Length = 756 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 316 ctccctgcgccgctcgccgctgatgaccagcac 348 |||||||| |||| |||||||||||||||||| Sbjct: 345 ctccctgctgcgctggccgctgatgaccagcac 313
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 gcacgaacttggcgtcctccttctcctcc 319 |||||||||||| |||||||| ||||||| Sbjct: 45508 gcacgaacttggagtcctcctcctcctcc 45480
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 agcttctcgacggtgacggtg 193 ||||||||||||||||||||| Sbjct: 1545 agcttctcgacggtgacggtg 1525
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 gcacgaacttggcgtcctccttctcctcc 319 |||||||||||| |||||||| ||||||| Sbjct: 20783109 gcacgaacttggagtcctcctcctcctcc 20783081
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 cgtcctccacctgcaccttga 374 ||||||||||||||||||||| Sbjct: 7952242 cgtcctccacctgcaccttga 7952262
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 cgacggtgacggtgagcacgccgtc 204 ||||||||||||||||| ||||||| Sbjct: 131709 cgacggtgacggtgagctcgccgtc 131685
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 cgtcctccacctgcaccttga 374 ||||||||||||||||||||| Sbjct: 59760 cgtcctccacctgcaccttga 59780
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 tcctccttctcctccctgcgccgct 329 ||||||| ||||||||||||||||| Sbjct: 58726 tcctcctcctcctccctgcgccgct 58750
>dbj|AK105954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D05, full insert sequence Length = 1695 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 cgacggtgacggtgagcacgccgtc 204 ||||||||||||||||| ||||||| Sbjct: 196 cgacggtgacggtgagctcgccgtc 172
>dbj|AK105317.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F06, full insert sequence Length = 725 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 cgtcctccacctgcaccttga 374 ||||||||||||||||||||| Sbjct: 256 cgtcctccacctgcaccttga 236
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 gcacgaacttggcgtcctccttctcctcc 319 |||||||||||| |||||||| ||||||| Sbjct: 20794373 gcacgaacttggagtcctcctcctcctcc 20794345
>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3 Length = 200252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 gctcgtcctccacctgcacct 371 ||||||||||||||||||||| Sbjct: 29331 gctcgtcctccacctgcacct 29311
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 gctcgtcctccacctgcacct 371 ||||||||||||||||||||| Sbjct: 175213 gctcgtcctccacctgcacct 175193
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cggcggagatcttctccatg 232 |||||||||||||||||||| Sbjct: 2077606 cggcggagatcttctccatg 2077625
>ref|NM_187471.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 425 acggtgacggtgagcacgcc 406
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tacacaccctctctctcaga 31 |||||||||||||||||||| Sbjct: 291003 tacacaccctctctctcaga 291022
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ctcgacggtgacggtgagcacgccgtcg 205 |||| ||||| ||||||||||||||||| Sbjct: 306284 ctcggcggtgtcggtgagcacgccgtcg 306257
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctcgccgctgatgaccagca 347 |||||||||||||||||||| Sbjct: 5589583 ctcgccgctgatgaccagca 5589564
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ctcctccctgcgccgctcgc 332 |||||||||||||||||||| Sbjct: 2082 ctcctccctgcgccgctcgc 2101
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgc 332 |||||||||||||||||||| Sbjct: 18610 ctcctccctgcgccgctcgc 18591
>emb|AL161731.20| Human DNA sequence from clone RP11-489N22 on chromosome 9 Contains the 3' end of the LMX1B gene for LIM homeobox transcription factor 1, beta (NPS1, LMX1.2), the ZNF297B gene for zinc finger protein 297B (ZNF-X, FLJ22470, KIAA0414) and three CpG islands, complete sequence Length = 182452 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctccacctgcaccttgatc 376 |||||||||||||||||||| Sbjct: 96955 cctccacctgcaccttgatc 96974
>emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 in linkage group 6, complete sequence Length = 162560 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 100807 ccgctcgtcctccacctgca 100788
>gb|AY936348.1| Cuscuta sandwichiana PsaB (psaB) and Rps14 (rps14) genes, complete cds; tRNA-Met and tRNA-Gly genes, complete sequence; Ycf9 (ycf9) gene, complete cds; tRNA-Ser gene, complete sequence; PsbC (psbC) and PsbD (psbD) genes, complete cds; tRNA-Thr, tRNA-Glu, tRNA-Tyr, and tRNA-Asp genes, complete sequence; and PsbM (psbM) gene, complete cds; chloroplast Length = 7350 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gggctcgggcggcggcagct 176 |||||||||||||||||||| Sbjct: 3761 gggctcgggcggcggcagct 3742
>emb|X75616.1|OS17HSP O.sativa (Tainong 67) mRNA for heat shock protein 17.8 Length = 712 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 509 acggtgacggtgagcacgcc 490
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 accagcacccgctcgtcctc 360 |||||||||||||||||||| Sbjct: 39125 accagcacccgctcgtcctc 39144
>emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle heavy chain myosin II-A (Myh9 gene) Length = 7355 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5727 ccgctcgtcctccacctgca 5708
>emb|AJ719391.1| Gallus gallus mRNA for hypothetical protein, clone 1n18 Length = 2221 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgccgct 336 |||||||||||||||| ||||||| Sbjct: 81 ctcctccctgcgccgcgcgccgct 58
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgc 332 |||||||||||||||||||| Sbjct: 22427 ctcctccctgcgccgctcgc 22408
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gacggtgacggtgagcacgccgtc 204 |||||||||| ||||||||||||| Sbjct: 3516781 gacggtgacgttgagcacgccgtc 3516804
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 cagcacccgctcgtcctccacctgcacc 370 ||||||||||||| ||| |||||||||| Sbjct: 2643226 cagcacccgctcgccctgcacctgcacc 2643253
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 gaacttgcgcatcagcttgcccatgcgg 280 ||||||| |||||| ||||||||||||| Sbjct: 2263558 gaacttgggcatcatcttgcccatgcgg 2263585
>dbj|AK147430.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1040F03 product:myosin heavy chain IX, full insert sequence Length = 7372 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5744 ccgctcgtcctccacctgca 5725
>dbj|AK147407.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1034I06 product:myosin heavy chain IX, full insert sequence Length = 7365 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5737 ccgctcgtcctccacctgca 5718
>dbj|AK147296.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1009M09 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147235.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1000I08 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147233.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1000D20 product:myosin heavy chain IX, full insert sequence Length = 7362 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147223.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421019F08 product:myosin heavy chain IX, full insert sequence Length = 7359 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5727 ccgctcgtcctccacctgca 5708
>dbj|AK147222.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:M421013D17 product:myosin heavy chain IX, full insert sequence Length = 7350 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5722 ccgctcgtcctccacctgca 5703
>dbj|AK147221.1| Mus musculus 16 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421012L14 product:myosin heavy chain IX, full insert sequence Length = 7309 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5681 ccgctcgtcctccacctgca 5662
>dbj|AK147216.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M421007L07 product:myosin heavy chain IX, full insert sequence Length = 7304 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5676 ccgctcgtcctccacctgca 5657
>dbj|AK147215.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421006M24 product:myosin heavy chain IX, full insert sequence Length = 7353 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5721 ccgctcgtcctccacctgca 5702
>dbj|AK147211.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421003O18 product:myosin heavy chain IX, full insert sequence Length = 7410 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5778 ccgctcgtcctccacctgca 5759
>dbj|AK147210.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421003H12 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147209.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M421002M21 product:myosin heavy chain IX, full insert sequence Length = 7362 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147208.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421002F11 product:myosin heavy chain IX, full insert sequence Length = 7371 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5743 ccgctcgtcctccacctgca 5724
>dbj|AK147206.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:M421002E03 product:myosin heavy chain IX, full insert sequence Length = 7363 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5735 ccgctcgtcctccacctgca 5716
>dbj|AK147203.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421001K04 product:myosin heavy chain IX, full insert sequence Length = 7354 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5726 ccgctcgtcctccacctgca 5707
>dbj|AK148323.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370090D06 product:myosin heavy chain IX, full insert sequence Length = 3745 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 2562 ccgctcgtcctccacctgca 2543
>gb|AY934530.1| Danio rerio nonmuscle myosin heavy chain B mRNA, partial cds Length = 642 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 256 ccgctcgtcctccacctgca 237
>ref|XM_677954.1| PREDICTED: Danio rerio similar to nonmuscle myosin heavy chain (LOC555454), mRNA Length = 3705 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 2097 ccgctcgtcctccacctgca 2078
>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete sequence Length = 185289 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 acacaccctctctctcagataacc 36 ||||||||||||| |||||||||| Sbjct: 77139 acacaccctctctttcagataacc 77116 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 acacaccctctctctcagataacc 36 ||||||||||||| |||||||||| Sbjct: 43482 acacaccctctctttcagataacc 43505
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 1247 acggtgacggtgagcacgcc 1266
>gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete sequence Length = 139631 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tacacaccctctctctcaga 31 |||||||||||||||||||| Sbjct: 101497 tacacaccctctctctcaga 101516
>ref|NM_022410.1| Mus musculus myosin, heavy polypeptide 9, non-muscle (Myh9), transcript variant 1, mRNA Length = 7355 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 5727 ccgctcgtcctccacctgca 5708
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ggcttcttgggctcgggcggcggc 172 |||||||| ||||||||||||||| Sbjct: 1528227 ggcttcttcggctcgggcggcggc 1528250
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cttctccatgtcggcgttct 242 |||||||||||||||||||| Sbjct: 1015565 cttctccatgtcggcgttct 1015546
>dbj|AK131171.1| Mus musculus mRNA for mFLJ00279 protein Length = 5254 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 3692 ccgctcgtcctccacctgca 3673
>gb|AE005113.1| Halobacterium sp. NRC-1 section 144 of 170 of the complete genome Length = 11086 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 193 gagcacgccgtcgcggcacgcggcggagatct 224 |||||||||||||| | ||||||||| ||||| Sbjct: 8036 gagcacgccgtcgctgtacgcggcggcgatct 8005
>gb|L27063.1|STMDNAGYR Streptomyces coelicolor dnaA-gyrA region Length = 8200 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 accagcacccgctcgtcctc 360 |||||||||||||||||||| Sbjct: 2674 accagcacccgctcgtcctc 2655
>dbj|AK120655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157L10, full insert sequence Length = 4025 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 905 acggtgacggtgagcacgcc 924
>dbj|AK069547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021P13, full insert sequence Length = 712 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 446 acggtgacggtgagcacgcc 427
>gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 mRNA sequence Length = 1082 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tggtcttgggcttcttgggc 160 |||||||||||||||||||| Sbjct: 320 tggtcttgggcttcttgggc 301
>gb|BC054360.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:4984186), partial cds Length = 2529 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 821 ccgctcgtcctccacctgca 802
>gb|BC043703.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:5354239), partial cds Length = 2608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 1411 ccgctcgtcctccacctgca 1392
>gb|BC044834.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:4951337), partial cds Length = 2896 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 2372 ccgctcgtcctccacctgca 2353
>gb|BC006075.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:3593519), partial cds Length = 1953 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 1272 ccgctcgtcctccacctgca 1253
>gb|U83671.1|OSU83671 Oryza sativa low molecular mass heat shock protein Oshsp17.7 (OSHSP17.7) gene, complete cds Length = 1535 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 1046 acggtgacggtgagcacgcc 1027
>gb|U83670.1|OSU83670 Oryza sativa low molecular mass heat shock protein Oshsp18.0 (OSHSP18.0) gene, complete cds Length = 1999 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 acggtgacggtgagcacgcc 201 |||||||||||||||||||| Sbjct: 954 acggtgacggtgagcacgcc 935
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tgggctcgggcggcggcagc 175 |||||||||||||||||||| Sbjct: 2933998 tgggctcgggcggcggcagc 2934017
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggtgacggtgagcacgccg 202 |||||||||||||||||||| Sbjct: 400776 cggtgacggtgagcacgccg 400757
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ctcctccctgcgccgctcgc 332 |||||||||||||||||||| Sbjct: 27156 ctcctccctgcgccgctcgc 27137
>emb|AL583886.11| Mouse DNA sequence from clone RP23-402G11 on chromosome 15, complete sequence Length = 198994 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 178731 ccgctcgtcctccacctgca 178712
>emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 in linkage group 6, complete sequence Length = 147484 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ccgctcgtcctccacctgca 368 |||||||||||||||||||| Sbjct: 61553 ccgctcgtcctccacctgca 61572
>dbj|D79980.1| Penicillium janthinellum DNA for polygalacturonase, complete cds Length = 3569 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tcgtcctccacctgcacctt 372 |||||||||||||||||||| Sbjct: 2104 tcgtcctccacctgcacctt 2123
>dbj|D87065.1| Triticum aestivum gene for histone H1, complete cds, clone:TH325 Length = 2541 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tggtcttgggcttcttgggc 160 |||||||||||||||||||| Sbjct: 1415 tggtcttgggcttcttgggc 1396 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,027,549 Number of Sequences: 3902068 Number of extensions: 3027549 Number of successful extensions: 91888 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90020 Number of HSP's gapped (non-prelim): 1864 length of query: 376 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 354 effective length of database: 17,147,199,772 effective search space: 6070108719288 effective search space used: 6070108719288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)