ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197898.1| Oryza sativa (japonica cultivar-group) hepatocy... 196 7e-47
2gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 geno... 196 7e-47
3emb|AJ495791.1|OSA495791 Oryza sativa (japonica cultivar-group) ... 196 7e-47
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 196 7e-47
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 196 7e-47
6dbj|AK067871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
7gb|BT013889.1| Lycopersicon esculentum clone 132874R, mRNA sequence 56 2e-04
8gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.64
9gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.64
10ref|XM_744404.1| Aspergillus fumigatus Af293 Ras GTPase activati... 44 0.64
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.64
12ref|XM_535458.2| PREDICTED: Canis familiaris similar to beta-2-m... 42 2.5
13emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i2... 42 2.5
14gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, co... 42 2.5
15emb|AL360272.23| Human DNA sequence from clone RP11-169I2 on chr... 42 2.5
16gb|AC068991.28| Homo sapiens 12 BAC RP11-300D9 (Roswell Park Can... 42 2.5
17gb|AC007065.5|AC007065 Homo sapiens, clone hRPK.58_A_1, complete... 42 2.5
18gb|AC117749.6| Mus musculus chromosome 1, clone RP24-319I19, com... 42 2.5
19emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chr... 42 2.5
20emb|BX321901.5| Mouse DNA sequence from clone RP23-303P18 on chr... 42 2.5
21gb|U82624.1|MMU82624 Mus musculus amyloid precursor protein (APP... 42 2.5
22gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosom... 40 10.0
23emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chrom... 40 10.0
24emb|CR974460.5| Pig DNA sequence from clone PigE-150I6 on chromo... 40 10.0
25gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome... 40 10.0
26gb|AC127685.4| Mus musculus BAC clone RP24-176M3 from chromosome... 40 10.0
27emb|Z81130.1|CET23G11 Caenorhabditis elegans Cosmid T23G11, comp... 40 10.0
28gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete s... 40 10.0
29gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 10.0
30emb|AL441923.9| Human DNA sequence from clone RP11-104D21 on chr... 40 10.0
31emb|AL356297.8| Human DNA sequence from clone RP11-447M23 on chr... 40 10.0
32emb|AL136088.10| Human DNA sequence from clone RP5-1024C24 on ch... 40 10.0
33emb|AL021307.1|HS106B9 Human DNA sequence from clone RP1-106B9 o... 40 10.0
34gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, com... 40 10.0
35gb|AC091725.2| Gallus gallus clone WAG-105M15, complete sequence 40 10.0
36gb|AC117462.5| Homo sapiens 3 BAC RP11-354H21 (Roswell Park Canc... 40 10.0
37gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, co... 40 10.0
38dbj|AP001894.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 10.0
39dbj|AK114259.1| Ciona intestinalis cDNA, clone:cicl050a23, full ... 40 10.0
40gb|AC159010.2| Gallus gallus BAC clone CH261-115H16 from chromos... 40 10.0
41gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, comple... 40 10.0 
>ref|NM_197898.1| Oryza sativa (japonica cultivar-group) hepatocyte growth
            factor-regulated tyrosine kinase substrate-like protein
            (OSJNBa0035H01.5), mRNA
          Length = 1554

 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/211 (86%)
 Strand = Plus / Minus

                                                                        
Query: 515  ggctccaccgtgactggaatcatcgctggttctggctcaggctctgcgacaatgggctcc 574
            |||||||| |||||||||||||| ||||| |||| |||||||||||| ||||  || |||
Sbjct: 1084 ggctccacggtgactggaatcatggctggctctgcctcaggctctgcaacaacaggttcc 1025

                                                                        
Query: 575  ttgaggtcttcgtacttggacagaactttctgaagttcatcgtggatgctcagtgcctcg 634
            ||||| ||||  |||||||| ||||| |||| ||||||||||||||  |||| |||||| 
Sbjct: 1024 ttgagttctttatacttggagagaaccttctcaagttcatcgtggacactcaatgcctca 965

                                                                        
Query: 635  aagagttgagcctcgttatcacctgcagtctcgacgattctctggatcgtgtgttgacac 694
            ||||| ||||||||||| ||||| || ||||| | |||||||||||| ||| | ||||||
Sbjct: 964  aagagctgagcctcgttgtcaccagccgtctcaatgattctctggatggtgcgctgacac 905

                                           
Query: 695  tgttggcattgctggaccagggtggtagtca 725
            |||||||||||||| ||||||||||||||||
Sbjct: 904  tgttggcattgctgaaccagggtggtagtca 874



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                        
Query: 368  tcctgctgagaggaggtgccggctttcttaccaaagatcatgtcatcaagatcctgaagc 427
            ||||||||||| ||||||||| | ||||| ||||| |||||||| |||||||||||||||
Sbjct: 1210 tcctgctgagatgaggtgccgcccttcttgccaaatatcatgtcgtcaagatcctgaagc 1151

                    
Query: 428  aagtcatc 435
            || |||||
Sbjct: 1150 aactcatc 1143
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>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete
             sequence
          Length = 64582

 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/211 (86%)
 Strand = Plus / Minus

                                                                         
Query: 515   ggctccaccgtgactggaatcatcgctggttctggctcaggctctgcgacaatgggctcc 574
             |||||||| |||||||||||||| ||||| |||| |||||||||||| ||||  || |||
Sbjct: 49861 ggctccacggtgactggaatcatggctggctctgcctcaggctctgcaacaacaggttcc 49802

                                                                         
Query: 575   ttgaggtcttcgtacttggacagaactttctgaagttcatcgtggatgctcagtgcctcg 634
             ||||| ||||  |||||||| ||||| |||| ||||||||||||||  |||| |||||| 
Sbjct: 49801 ttgagttctttatacttggagagaaccttctcaagttcatcgtggacactcaatgcctca 49742

                                                                         
Query: 635   aagagttgagcctcgttatcacctgcagtctcgacgattctctggatcgtgtgttgacac 694
             ||||| ||||||||||| ||||| || ||||| | |||||||||||| ||| | ||||||
Sbjct: 49741 aagagctgagcctcgttgtcaccagccgtctcaatgattctctggatggtgcgctgacac 49682

                                            
Query: 695   tgttggcattgctggaccagggtggtagtca 725
             |||||||||||||| ||||||||||||||||
Sbjct: 49681 tgttggcattgctgaaccagggtggtagtca 49651



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                         
Query: 368   tcctgctgagaggaggtgccggctttcttaccaaagatcatgtcatcaagatcctgaagc 427
             ||||||||||| ||||||||| | ||||| ||||| |||||||| |||||||||||||||
Sbjct: 49987 tcctgctgagatgaggtgccgcccttcttgccaaatatcatgtcgtcaagatcctgaagc 49928

                     
Query: 428   aagtcatc 435
             || |||||
Sbjct: 49927 aactcatc 49920
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>emb|AJ495791.1|OSA495791 Oryza sativa (japonica cultivar-group) mRNA for TOM2 protein
          Length = 1606

 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/211 (86%)
 Strand = Plus / Minus

                                                                        
Query: 515  ggctccaccgtgactggaatcatcgctggttctggctcaggctctgcgacaatgggctcc 574
            |||||||| |||||||||||||| ||||| |||| |||||||||||| ||||  || |||
Sbjct: 1100 ggctccacggtgactggaatcatggctggctctgcctcaggctctgcaacaacaggttcc 1041

                                                                        
Query: 575  ttgaggtcttcgtacttggacagaactttctgaagttcatcgtggatgctcagtgcctcg 634
            ||||| ||||  |||||||| ||||| |||| ||||||||||||||  |||| |||||| 
Sbjct: 1040 ttgagttctttatacttggagagaaccttctcaagttcatcgtggacactcaatgcctca 981

                                                                        
Query: 635  aagagttgagcctcgttatcacctgcagtctcgacgattctctggatcgtgtgttgacac 694
            ||||| ||||||||||| ||||| || ||||| | |||||||||||| ||| | ||||||
Sbjct: 980  aagagctgagcctcgttgtcaccagccgtctcaatgattctctggatggtgcgctgacac 921

                                           
Query: 695  tgttggcattgctggaccagggtggtagtca 725
            |||||||||||||| ||||||||||||||||
Sbjct: 920  tgttggcattgctgaaccagggtggtagtca 890



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                        
Query: 368  tcctgctgagaggaggtgccggctttcttaccaaagatcatgtcatcaagatcctgaagc 427
            ||||||||||| ||||||||| | ||||| ||||| |||||||| |||||||||||||||
Sbjct: 1226 tcctgctgagatgaggtgccgcccttcttgccaaatatcatgtcgtcaagatcctgaagc 1167

                    
Query: 428  aagtcatc 435
            || |||||
Sbjct: 1166 aactcatc 1159
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/211 (86%)
 Strand = Plus / Minus

                                                                            
Query: 515      ggctccaccgtgactggaatcatcgctggttctggctcaggctctgcgacaatgggctcc 574
                |||||||| |||||||||||||| ||||| |||| |||||||||||| ||||  || |||
Sbjct: 22534143 ggctccacggtgactggaatcatggctggctctgcctcaggctctgcaacaacaggttcc 22534084

                                                                            
Query: 575      ttgaggtcttcgtacttggacagaactttctgaagttcatcgtggatgctcagtgcctcg 634
                ||||| ||||  |||||||| ||||| |||| ||||||||||||||  |||| |||||| 
Sbjct: 22534083 ttgagttctttatacttggagagaaccttctcaagttcatcgtggacactcaatgcctca 22534024

                                                                            
Query: 635      aagagttgagcctcgttatcacctgcagtctcgacgattctctggatcgtgtgttgacac 694
                ||||| ||||||||||| ||||| || ||||| | |||||||||||| ||| | ||||||
Sbjct: 22534023 aagagctgagcctcgttgtcaccagccgtctcaatgattctctggatggtgcgctgacac 22533964

                                               
Query: 695      tgttggcattgctggaccagggtggtagtca 725
                |||||||||||||| ||||||||||||||||
Sbjct: 22533963 tgttggcattgctgaaccagggtggtagtca 22533933



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                            
Query: 368      tcctgctgagaggaggtgccggctttcttaccaaagatcatgtcatcaagatcctgaagc 427
                ||||||||||| ||||||||| | ||||| ||||| |||||||| |||||||||||||||
Sbjct: 22534269 tcctgctgagatgaggtgccgcccttcttgccaaatatcatgtcgtcaagatcctgaagc 22534210

                        
Query: 428      aagtcatc 435
                || |||||
Sbjct: 22534209 aactcatc 22534202
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/211 (86%)
 Strand = Plus / Minus

                                                                            
Query: 515      ggctccaccgtgactggaatcatcgctggttctggctcaggctctgcgacaatgggctcc 574
                |||||||| |||||||||||||| ||||| |||| |||||||||||| ||||  || |||
Sbjct: 22546611 ggctccacggtgactggaatcatggctggctctgcctcaggctctgcaacaacaggttcc 22546552

                                                                            
Query: 575      ttgaggtcttcgtacttggacagaactttctgaagttcatcgtggatgctcagtgcctcg 634
                ||||| ||||  |||||||| ||||| |||| ||||||||||||||  |||| |||||| 
Sbjct: 22546551 ttgagttctttatacttggagagaaccttctcaagttcatcgtggacactcaatgcctca 22546492

                                                                            
Query: 635      aagagttgagcctcgttatcacctgcagtctcgacgattctctggatcgtgtgttgacac 694
                ||||| ||||||||||| ||||| || ||||| | |||||||||||| ||| | ||||||
Sbjct: 22546491 aagagctgagcctcgttgtcaccagccgtctcaatgattctctggatggtgcgctgacac 22546432

                                               
Query: 695      tgttggcattgctggaccagggtggtagtca 725
                |||||||||||||| ||||||||||||||||
Sbjct: 22546431 tgttggcattgctgaaccagggtggtagtca 22546401



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                            
Query: 368      tcctgctgagaggaggtgccggctttcttaccaaagatcatgtcatcaagatcctgaagc 427
                ||||||||||| ||||||||| | ||||| ||||| |||||||| |||||||||||||||
Sbjct: 22546737 tcctgctgagatgaggtgccgcccttcttgccaaatatcatgtcgtcaagatcctgaagc 22546678

                        
Query: 428      aagtcatc 435
                || |||||
Sbjct: 22546677 aactcatc 22546670
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>dbj|AK067871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126G20, full
           insert sequence
          Length = 1169

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 368 tcctgctgagaggaggtgccggctttcttaccaaagatcatgtcatcaagatcctgaagc 427
           ||||||||||| ||||||||| | ||||| ||||| |||||||| |||||||||||||||
Sbjct: 813 tcctgctgagatgaggtgccgcccttcttgccaaatatcatgtcgtcaagatcctgaagc 754

                   
Query: 428 aagtcatc 435
           || |||||
Sbjct: 753 aactcatc 746
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>gb|BT013889.1| Lycopersicon esculentum clone 132874R, mRNA sequence
          Length = 1537

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 509  tcctcgggctccaccgtgactggaatcatcgctggttctggctc 552
            |||||||||||||| | |||||||||||| || |||||||||||
Sbjct: 1143 tcctcgggctccactgcgactggaatcatggcaggttctggctc 1100



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 389  gctttcttaccaaagatcatgtcatcaagatc 420
            ||||| |||||||| ||||| |||||||||||
Sbjct: 1269 gcttttttaccaaaaatcatctcatcaagatc 1238
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>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
            complete sequence
          Length = 108479

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 109  ataatttggcacgcataacaaccaca 134
            ||||||||| ||||||||||||||||
Sbjct: 2874 ataatttggaacgcataacaaccaca 2849
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>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07,
              complete sequence
          Length = 148731

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 109    ataatttggcacgcataacaaccaca 134
              ||||||||| ||||||||||||||||
Sbjct: 147112 ataatttggaacgcataacaaccaca 147087
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>ref|XM_744404.1| Aspergillus fumigatus Af293 Ras GTPase activating protein
            (Afu2g03640) partial mRNA
          Length = 5253

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 540  ctggttctggctcaggctctgc 561
            ||||||||||||||||||||||
Sbjct: 1393 ctggttctggctcaggctctgc 1372
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 109      ataatttggcacgcataacaaccaca 134
                ||||||||| ||||||||||||||||
Sbjct: 28992819 ataatttggaacgcataacaaccaca 28992794
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>ref|XM_535458.2| PREDICTED: Canis familiaris similar to beta-2-microglobulin
           precursor, transcript variant 2 (LOC478284), mRNA
          Length = 1116

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  caaatttccaataatttggca 119
           |||||||||||||||||||||
Sbjct: 980 caaatttccaataatttggca 960
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>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE
          Length = 123473

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 414   caagatcctgaagcaagtcat 434
             |||||||||||||||||||||
Sbjct: 60974 caagatcctgaagcaagtcat 60994
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>gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, complete sequence
          Length = 208469

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 508   ttcctcgggctccaccgtgactgga 532
             ||||||||||||||||||| |||||
Sbjct: 84135 ttcctcgggctccaccgtggctgga 84159
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>emb|AL360272.23| Human DNA sequence from clone RP11-169I2 on chromosome 6 Contains the
            3' end of the SUPT3H gene for suppressor of Ty 3 homolog
            (S. cerevisiae), complete sequence
          Length = 110382

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 50   aatatacatgaaactcaatct 70
            |||||||||||||||||||||
Sbjct: 7314 aatatacatgaaactcaatct 7334
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>gb|AC068991.28| Homo sapiens 12 BAC RP11-300D9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173639

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    aatatacatgaaactcaatct 70
             |||||||||||||||||||||
Sbjct: 12648 aatatacatgaaactcaatct 12668
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>gb|AC007065.5|AC007065 Homo sapiens, clone hRPK.58_A_1, complete sequence
          Length = 169325

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 50   aatatacatgaaactcaatct 70
            |||||||||||||||||||||
Sbjct: 8378 aatatacatgaaactcaatct 8398
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>gb|AC117749.6| Mus musculus chromosome 1, clone RP24-319I19, complete sequence
          Length = 174793

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 508   ttcctcgggctccaccgtgactgga 532
             ||||||||||||||||||| |||||
Sbjct: 20370 ttcctcgggctccaccgtggctgga 20394
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>emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chromosome 16, complete
              sequence
          Length = 229346

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 539    gctggttctggctcaggctct 559
              |||||||||||||||||||||
Sbjct: 109405 gctggttctggctcaggctct 109385
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>emb|BX321901.5| Mouse DNA sequence from clone RP23-303P18 on chromosome 2, complete
             sequence
          Length = 112140

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 43    tatacaaaatatacatgaaactcaa 67
             ||||||||||||||| |||||||||
Sbjct: 74010 tatacaaaatatacacgaaactcaa 74034
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>gb|U82624.1|MMU82624 Mus musculus amyloid precursor protein (APP) gene, partial cds,
           exons 16 and 17
          Length = 7097

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 539 gctggttctggctcaggctct 559
           |||||||||||||||||||||
Sbjct: 97  gctggttctggctcaggctct 117
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>gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosome 3, complete sequence
          Length = 204731

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaatatacatgaaactcaat 68
              ||||||||||||||||||||
Sbjct: 203581 aaatatacatgaaactcaat 203600
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>emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chromosome 17, complete
             sequence
          Length = 239237

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   ataacaaccacagaaagaaa 142
             ||||||||||||||||||||
Sbjct: 78394 ataacaaccacagaaagaaa 78413
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>emb|CR974460.5| Pig DNA sequence from clone PigE-150I6 on chromosome 7, complete
             sequence
          Length = 122162

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 396   taccaaagatcatgtcatcaagat 419
             ||||||||||||||| ||||||||
Sbjct: 28937 taccaaagatcatgtaatcaagat 28960
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>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence
          Length = 170885

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 563   acaatgggctccttgaggtc 582
             ||||||||||||||||||||
Sbjct: 94171 acaatgggctccttgaggtc 94152
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>gb|AC127685.4| Mus musculus BAC clone RP24-176M3 from chromosome 3, complete sequence
          Length = 166417

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaatatacatgaaactcaat 68
             ||||||||||||||||||||
Sbjct: 46826 aaatatacatgaaactcaat 46807
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>emb|Z81130.1|CET23G11 Caenorhabditis elegans Cosmid T23G11, complete sequence
          Length = 24762

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    tccaaatttccaataatttggcac 120
             ||||||||||||| ||||||||||
Sbjct: 14038 tccaaatttccaaaaatttggcac 14015
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>gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete sequence
          Length = 135940

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gcattccaaatttccaataa 112
             ||||||||||||||||||||
Sbjct: 85028 gcattccaaatttccaataa 85009
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    ttaccaaagatcatgtcatc 414
              ||||||||||||||||||||
Sbjct: 860613 ttaccaaagatcatgtcatc 860594
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>emb|AL441923.9| Human DNA sequence from clone RP11-104D21 on chromosome Xp11.21-11.23
             Contains a melanoma antigen pseudogene, a pseudogene
             similar to part of SAH (SA hypertension-associated homolog
             (rat)) and a the 3' end of a novel gene, complete sequence
          Length = 76656

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 47    caaaatatacatgaaactcaatct 70
             ||||||||| ||||||||||||||
Sbjct: 39960 caaaatatatatgaaactcaatct 39983
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>emb|AL356297.8| Human DNA sequence from clone RP11-447M23 on chromosome 13, complete
            sequence
          Length = 20827

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   ttatacaaaatatacatgaa 61
            ||||||||||||||||||||
Sbjct: 3242 ttatacaaaatatacatgaa 3261
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>emb|AL136088.10| Human DNA sequence from clone RP5-1024C24 on chromosome 11p13-14.1
             Contains the C11ORF8 gene, ESTs, STSs, GSSs and a CpG
             island, complete sequence
          Length = 108135

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tatacaaaatatacatgaaa 62
             ||||||||||||||||||||
Sbjct: 29615 tatacaaaatatacatgaaa 29596
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>emb|AL021307.1|HS106B9 Human DNA sequence from clone RP1-106B9 on chromosome Xq21, complete
             sequence
          Length = 109155

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 704   tgctggaccagggtggtagt 723
             ||||||||||||||||||||
Sbjct: 90821 tgctggaccagggtggtagt 90802
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>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence
          Length = 198253

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 591   tggacagaactttctgaagt 610
             ||||||||||||||||||||
Sbjct: 93726 tggacagaactttctgaagt 93707
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>gb|AC091725.2| Gallus gallus clone WAG-105M15, complete sequence
          Length = 98793

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   aaccacagaaagaaaaggag 147
             ||||||||||||||||||||
Sbjct: 55312 aaccacagaaagaaaaggag 55293
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>gb|AC117462.5| Homo sapiens 3 BAC RP11-354H21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 146853

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    tatacaaaatatacatgaaactca 66
             ||||||||||||||||||| ||||
Sbjct: 77533 tatacaaaatatacatgaatctca 77556
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>gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, complete sequence
          Length = 192545

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 591   tggacagaactttctgaagt 610
             ||||||||||||||||||||
Sbjct: 59255 tggacagaactttctgaagt 59236
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>dbj|AP001894.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-606E8, complete
             sequence
          Length = 151452

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    caaaatatacatgaaactca 66
             ||||||||||||||||||||
Sbjct: 41213 caaaatatacatgaaactca 41194
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>dbj|AK114259.1| Ciona intestinalis cDNA, clone:cicl050a23, full insert sequence
          Length = 1787

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 530 ggaatcatcgctggttctgg 549
           ||||||||||||||||||||
Sbjct: 600 ggaatcatcgctggttctgg 619
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>gb|AC159010.2| Gallus gallus BAC clone CH261-115H16 from chromosome unknown, complete
              sequence
          Length = 209348

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    aaccacagaaagaaaaggag 147
              ||||||||||||||||||||
Sbjct: 122073 aaccacagaaagaaaaggag 122092
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>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence
          Length = 218935

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 563 acaatgggctccttgaggtc 582
           ||||||||||||||||||||
Sbjct: 164 acaatgggctccttgaggtc 145


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,554,677
Number of Sequences: 3902068
Number of extensions: 6554677
Number of successful extensions: 120234
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120055
Number of HSP's gapped (non-prelim): 179
length of query: 728
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 705
effective length of database: 17,143,297,704
effective search space: 12086024881320
effective search space used: 12086024881320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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