>TRIP4_MOUSE (Q9QXN3) Activating signal cointegrator 1 (ASC-1) (Thyroid|
           receptor-interacting protein 4) (Trip-4)
          Length = 581

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = -3

Query: 595 DAEGVKPIL---DVLCENRTEALRQRAVWAVERILRTDEIAYEISGNQNVSTALVEAFRH 425
           + EG  P L    ++C N  + + QR     +++L+      E SG  +VST   +   H
Sbjct: 193 EQEGSGPCLFCGSLVCTNEEQDILQRDSNKSQKLLKKLMSGAETSGKVDVSTK--DLLPH 250

Query: 424 GDFRTRQIAERALKHVDKLPNF 359
            + R +   E+A+KH +KL  F
Sbjct: 251 QESRMKSGLEKAIKHKEKLLEF 272

>TRIP4_HUMAN (Q15650) Activating signal cointegrator 1 (ASC-1) (Thyroid|
           receptor-interacting protein 4) (TRIP-4)
          Length = 581

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = -3

Query: 595 DAEGVKPIL---DVLCENRTEALRQRAVWAVERILRTDEIAYEISGNQNVSTALVEAFRH 425
           + EG  P L    ++C +  + + QR     +++L+      E SG  ++ST   +   H
Sbjct: 193 EQEGSGPCLFCGTLVCTHEEQDILQRDSNKSQKLLKKLMSGVENSGKVDISTK--DLLPH 250

Query: 424 GDFRTRQIAERALKHVDKLPNF 359
            + R +   E+A+KH DKL  F
Sbjct: 251 QELRIKSGLEKAIKHKDKLLEF 272

>IMA7_MOUSE (O35345) Importin alpha-7 subunit (Karyopherin alpha-6 subunit)|
           (Importin alpha S2)
          Length = 533

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -3

Query: 577 PILDVLCENRTEALRQRAVWAVERILRTDEIAYEISGNQNVSTALVEAFRHGDFRTRQIA 398
           P L  L  +  E++R+ A W +  I   +    +   + N+   L+E  +  +FRTR+ A
Sbjct: 336 PCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEA 395

Query: 397 ERAL 386
             A+
Sbjct: 396 AWAI 399

>IMA5_HUMAN (O15131) Importin alpha-6 subunit (Karyopherin alpha-5 subunit)|
          Length = 536

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -3

Query: 577 PILDVLCENRTEALRQRAVWAVERILRTDEIAYEISGNQNVSTALVEAFRHGDFRTRQIA 398
           P L  L  +  E++R+ A W V  I   +    +   + N+   L+E  +  +FRTR+ A
Sbjct: 339 PCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEA 398

Query: 397 ERAL 386
             A+
Sbjct: 399 AWAI 402

>IMA7_HUMAN (O60684) Importin alpha-7 subunit (Karyopherin alpha-6)|
          Length = 536

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -3

Query: 577 PILDVLCENRTEALRQRAVWAVERILRTDEIAYEISGNQNVSTALVEAFRHGDFRTRQIA 398
           P L  L  +  E++R+ A W +  I   +    +   + N+   L+E  +  +FRTR+ A
Sbjct: 339 PCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEA 398

Query: 397 ERAL 386
             A+
Sbjct: 399 AWAI 402

>DUT_HHV6Z (P52541) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC|
           3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 376

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 325 PCYA-KVGVLLYRSPADPLEFHKDTKLKYLRMPNLTSINCFPSLTVLAQPL 176
           PCY  +   ++  SP +   FH  T  +++  PN  +I CF ++ V A  L
Sbjct: 236 PCYIPEPWEMINLSPPESAVFHLKTCREFIIKPNSYTIQCFDAMYVCADEL 286

>IMA1_HUMAN (P52294) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)|
           (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein
           interactor 1) (NPI-1)
          Length = 538

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/59 (23%), Positives = 29/59 (49%)
 Frame = -3

Query: 562 LCENRTEALRQRAVWAVERILRTDEIAYEISGNQNVSTALVEAFRHGDFRTRQIAERAL 386
           L  +  E++++ A W +  I   +    +   + N+  AL+   +  +FRTR+ A  A+
Sbjct: 346 LLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAI 404


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,495,090
Number of Sequences: 219361
Number of extensions: 1725120
Number of successful extensions: 4526
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4510
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)