ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35b15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 216 6e-53
3emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb... 216 6e-53
4dbj|AK102429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
5emb|AL139005.12| Human DNA sequence from clone RP11-95G6 on chro... 44 0.52
6gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete s... 42 2.1
7gb|AC027304.4| Homo sapiens chromosome 5 clone CTB-118N6, comple... 42 2.1
8gb|AC008651.7|AC008651 Homo sapiens chromosome 5 clone CTB-187A7... 42 2.1
9emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chr... 42 2.1
10gb|AC100269.7| Mus musculus chromosome 5, clone RP23-67B9, compl... 40 8.1
11gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosom... 40 8.1
12gb|DQ172832.1| Pseudomonas fluorescens ben operon, partial sequence 40 8.1
13gb|AC154422.2| Mus musculus BAC clone RP24-218O2 from chromosome... 40 8.1
14gb|AC147886.2| Xenopus tropicalis clone CH216-134O16, complete s... 40 8.1
15emb|CT009488.4| M.truncatula DNA sequence from clone MTH2-70J8 o... 40 8.1
16emb|AL049696.9|HSJ279A18 Human DNA sequence from clone RP1-279A1... 40 8.1
17emb|AL033538.1|HS477H23 Human DNA sequence from clone RP3-477H23... 40 8.1
18gb|AC165255.2| Mus musculus BAC clone RP23-239B8 from chromosome... 40 8.1
19gb|AC138064.14| Pan troglodytes clone rp43-10k8, complete sequence 40 8.1
20dbj|AP008945.1| Oryzias latipes mitochondrial DNA, complete geno... 40 8.1
21dbj|AP008942.1| Oryzias latipes mitochondrial DNA, complete geno... 40 8.1
22dbj|AP008939.1| Oryzias latipes mitochondrial DNA, complete geno... 40 8.1
23gb|AC115007.6| Mus musculus chromosome 5, clone RP24-188P11, com... 40 8.1
24gb|AC174451.3| Mus musculus BAC clone RP23-182A1 from chromosome... 40 8.1
25gb|AC116483.10| Mus musculus chromosome 1, clone RP23-424K5, com... 40 8.1
26gb|AC118544.7| Mus musculus strain C57BL/6J chromosome 5 clone r... 40 8.1
27dbj|AP004421.1| Oryzias latipes mitochondrial DNA, complete genome 40 8.1
28emb|AL008724.1|HSB107C2 Human DNA sequence from clone SC22CB-107... 40 8.1
29gb|AC140434.3| Mus musculus BAC clone RP24-105G15 from 3, comple... 40 8.1
30emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on ch... 40 8.1
31dbj|AB051435.1| Homo sapiens mRNA for KIAA1648 protein, partial cds 40 8.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  216 bits (109), Expect = 6e-53
 Identities = 223/261 (85%)
 Strand = Plus / Plus

                                                                            
Query: 332      tgccccgatcttcgaaaatatcccagagaaattgggcagcttatcaacatgctttagcgc 391
                |||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 10280430 tgcccccatcttggaaaatattccagagaaattgggcagcttgtcaacatgctttagtgc 10280489

                                                                            
Query: 392      tcgctctgcaatttgtcttgtcctaaagtcaccatgcctgaaagcttcgaccaaggctgt 451
                ||||||||| ||||||||||||||  |||||||||||||||| ||||| || || |||||
Sbjct: 10280490 tcgctctgctatttgtcttgtcctggagtcaccatgcctgaatgcttcaactaatgctgt 10280549

                                                                            
Query: 452      actaacattttggtttcccgagatctcataagctatttcatccgtcctaaggatcctttc 511
                 | ||||||||||||||| || ||||||||||||||||| ||  |||| |||||||| ||
Sbjct: 10280550 tccaacattttggtttccagatatctcataagctatttcgtctatcctcaggatcctctc 10280609

                                                                            
Query: 512      tacggcccacaccgctctctgcctcagcgcctcggtccgattctcacacaatacatcaag 571
                 || |||||||| |||| |||||  || |||||  | |||||||| || ||||| || ||
Sbjct: 10280610 caccgcccacactgctcgctgccgaagtgcctcattacgattctcgcataatacctctag 10280669

                                     
Query: 572      aattggtttcacgccctctgc 592
                |||||| || || ||||||||
Sbjct: 10280670 aattggattgaccccctctgc 10280690



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 33       aaaaatatcacgctatggatctgagcatctgaataatacagatacaa 79
                ||||||| || |||||||||| |  ||||||||||||||||| ||||
Sbjct: 10280132 aaaaatagcatgctatggatccggccatctgaataatacagacacaa 10280178
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  216 bits (109), Expect = 6e-53
 Identities = 223/261 (85%)
 Strand = Plus / Plus

                                                                            
Query: 332      tgccccgatcttcgaaaatatcccagagaaattgggcagcttatcaacatgctttagcgc 391
                |||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 10280312 tgcccccatcttggaaaatattccagagaaattgggcagcttgtcaacatgctttagtgc 10280371

                                                                            
Query: 392      tcgctctgcaatttgtcttgtcctaaagtcaccatgcctgaaagcttcgaccaaggctgt 451
                ||||||||| ||||||||||||||  |||||||||||||||| ||||| || || |||||
Sbjct: 10280372 tcgctctgctatttgtcttgtcctggagtcaccatgcctgaatgcttcaactaatgctgt 10280431

                                                                            
Query: 452      actaacattttggtttcccgagatctcataagctatttcatccgtcctaaggatcctttc 511
                 | ||||||||||||||| || ||||||||||||||||| ||  |||| |||||||| ||
Sbjct: 10280432 tccaacattttggtttccagatatctcataagctatttcgtctatcctcaggatcctctc 10280491

                                                                            
Query: 512      tacggcccacaccgctctctgcctcagcgcctcggtccgattctcacacaatacatcaag 571
                 || |||||||| |||| |||||  || |||||  | |||||||| || ||||| || ||
Sbjct: 10280492 caccgcccacactgctcgctgccgaagtgcctcattacgattctcgcataatacctctag 10280551

                                     
Query: 572      aattggtttcacgccctctgc 592
                |||||| || || ||||||||
Sbjct: 10280552 aattggattgaccccctctgc 10280572



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 33       aaaaatatcacgctatggatctgagcatctgaataatacagatacaa 79
                ||||||| || |||||||||| |  ||||||||||||||||| ||||
Sbjct: 10280014 aaaaatagcatgctatggatccggccatctgaataatacagacacaa 10280060
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>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135439

 Score =  216 bits (109), Expect = 6e-53
 Identities = 223/261 (85%)
 Strand = Plus / Plus

                                                                         
Query: 332   tgccccgatcttcgaaaatatcccagagaaattgggcagcttatcaacatgctttagcgc 391
             |||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 43349 tgcccccatcttggaaaatattccagagaaattgggcagcttgtcaacatgctttagtgc 43408

                                                                         
Query: 392   tcgctctgcaatttgtcttgtcctaaagtcaccatgcctgaaagcttcgaccaaggctgt 451
             ||||||||| ||||||||||||||  |||||||||||||||| ||||| || || |||||
Sbjct: 43409 tcgctctgctatttgtcttgtcctggagtcaccatgcctgaatgcttcaactaatgctgt 43468

                                                                         
Query: 452   actaacattttggtttcccgagatctcataagctatttcatccgtcctaaggatcctttc 511
              | ||||||||||||||| || ||||||||||||||||| ||  |||| |||||||| ||
Sbjct: 43469 tccaacattttggtttccagatatctcataagctatttcgtctatcctcaggatcctctc 43528

                                                                         
Query: 512   tacggcccacaccgctctctgcctcagcgcctcggtccgattctcacacaatacatcaag 571
              || |||||||| |||| |||||  || |||||  | |||||||| || ||||| || ||
Sbjct: 43529 caccgcccacactgctcgctgccgaagtgcctcattacgattctcgcataatacctctag 43588

                                  
Query: 572   aattggtttcacgccctctgc 592
             |||||| || || ||||||||
Sbjct: 43589 aattggattgaccccctctgc 43609



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 33    aaaaatatcacgctatggatctgagcatctgaataatacagatacaa 79
             ||||||| || |||||||||| |  ||||||||||||||||| ||||
Sbjct: 43051 aaaaatagcatgctatggatccggccatctgaataatacagacacaa 43097
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>dbj|AK102429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093H07, full
            insert sequence
          Length = 3398

 Score =  210 bits (106), Expect = 4e-51
 Identities = 211/246 (85%)
 Strand = Plus / Minus

                                                                        
Query: 332  tgccccgatcttcgaaaatatcccagagaaattgggcagcttatcaacatgctttagcgc 391
            |||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 3001 tgcccccatcttggaaaatattccagagaaattgggcagcttgtcaacatgctttagtgc 2942

                                                                        
Query: 392  tcgctctgcaatttgtcttgtcctaaagtcaccatgcctgaaagcttcgaccaaggctgt 451
            ||||||||| ||||||||||||||  |||||||||||||||| ||||| || || |||||
Sbjct: 2941 tcgctctgctatttgtcttgtcctggagtcaccatgcctgaatgcttcaactaatgctgt 2882

                                                                        
Query: 452  actaacattttggtttcccgagatctcataagctatttcatccgtcctaaggatcctttc 511
             | ||||||||||||||| || ||||||||||||||||| ||  |||| |||||||| ||
Sbjct: 2881 tccaacattttggtttccagatatctcataagctatttcgtctatcctcaggatcctctc 2822

                                                                        
Query: 512  tacggcccacaccgctctctgcctcagcgcctcggtccgattctcacacaatacatcaag 571
             || |||||||| |||| |||||  || |||||  | |||||||| || ||||| || ||
Sbjct: 2821 caccgcccacactgctcgctgccgaagtgcctcattacgattctcgcataatacctctag 2762

                  
Query: 572  aattgg 577
            ||||||
Sbjct: 2761 aattgg 2756



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 33   aaaaatatcacgctatggatctgagcatctgaataatacagatacaa 79
            ||||||| || |||||||||| |  ||||||||||||||||| ||||
Sbjct: 3299 aaaaatagcatgctatggatccggccatctgaataatacagacacaa 3253
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>emb|AL139005.12| Human DNA sequence from clone RP11-95G6 on chromosome 13 Contains the
             5' end of the FLT1 gene for fms-related tyrosine kinase 1
             (vascular endothelial growth factor/vascular permeability
             factor receptor) and a CpG island, complete sequence
          Length = 102119

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 307   ctacttttgcataacatggtca 328
             ||||||||||||||||||||||
Sbjct: 13170 ctacttttgcataacatggtca 13191
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>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence
          Length = 125129

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaatatacactatactataca 116
             |||||||||||||||||||||
Sbjct: 39965 aaatatacactatactataca 39945
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>gb|AC027304.4| Homo sapiens chromosome 5 clone CTB-118N6, complete sequence
          Length = 111096

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 351   atcccagagaaattgggcagc 371
             |||||||||||||||||||||
Sbjct: 14250 atcccagagaaattgggcagc 14270
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>gb|AC008651.7|AC008651 Homo sapiens chromosome 5 clone CTB-187A7, complete sequence
          Length = 147098

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 351   atcccagagaaattgggcagc 371
             |||||||||||||||||||||
Sbjct: 21962 atcccagagaaattgggcagc 21942
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>emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chromosome 4, complete
             sequence
          Length = 188425

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 98    atatacactatactatacaca 118
             |||||||||||||||||||||
Sbjct: 51499 atatacactatactatacaca 51519
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>gb|AC100269.7| Mus musculus chromosome 5, clone RP23-67B9, complete sequence
          Length = 237273

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     agcatctgaataatacagat 75
              ||||||||||||||||||||
Sbjct: 126723 agcatctgaataatacagat 126742
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>gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosome 14, complete sequence
          Length = 214057

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    atacactatactatacacac 119
              ||||||||||||||||||||
Sbjct: 107960 atacactatactatacacac 107979
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>gb|DQ172832.1| Pseudomonas fluorescens ben operon, partial sequence
          Length = 4779

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 ctcaagaggatctgcaggtg 288
           ||||||||||||||||||||
Sbjct: 305 ctcaagaggatctgcaggtg 286
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>gb|AC154422.2| Mus musculus BAC clone RP24-218O2 from chromosome 13, complete sequence
          Length = 170866

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 256    tatctttatgaaactcaagaggatctgc 283
              ||||||||||||||| |||| |||||||
Sbjct: 151218 tatctttatgaaactaaagacgatctgc 151245
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>gb|AC147886.2| Xenopus tropicalis clone CH216-134O16, complete sequence
          Length = 150155

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     tatacactatactatacaca 118
              ||||||||||||||||||||
Sbjct: 124618 tatacactatactatacaca 124637



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     tatacactatactatacaca 118
              ||||||||||||||||||||
Sbjct: 124583 tatacactatactatacaca 124602



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     tatacactatactatacaca 118
              ||||||||||||||||||||
Sbjct: 124548 tatacactatactatacaca 124567



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     tatacactatactatacaca 118
              ||||||||||||||||||||
Sbjct: 124513 tatacactatactatacaca 124532
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>emb|CT009488.4| M.truncatula DNA sequence from clone MTH2-70J8 on chromosome 3, complete
              sequence
          Length = 119377

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    aattgattgatgtgagattt 230
              ||||||||||||||||||||
Sbjct: 109173 aattgattgatgtgagattt 109192
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>emb|AL049696.9|HSJ279A18 Human DNA sequence from clone RP1-279A18 on chromosome 6q13-15 Contains
             the 3' part of the BCKDHB gene for branched chain keto
             acid dehydrogenase E1, beta polypeptide (maple syrup urine
             disease), complete sequence
          Length = 142707

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   gcaaatatttgagttttgta 257
             ||||||||||||||||||||
Sbjct: 74760 gcaaatatttgagttttgta 74741
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>emb|AL033538.1|HS477H23 Human DNA sequence from clone RP3-477H23 on chromosome 22q12.1-12.2,
             complete sequence
          Length = 114600

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   agaggatctgcaggtgacct 292
             ||||||||||||||||||||
Sbjct: 45955 agaggatctgcaggtgacct 45974
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>gb|AC165255.2| Mus musculus BAC clone RP23-239B8 from chromosome 13, complete sequence
          Length = 205903

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 256    tatctttatgaaactcaagaggatctgc 283
              ||||||||||||||| |||| |||||||
Sbjct: 145282 tatctttatgaaactaaagacgatctgc 145255
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>gb|AC138064.14| Pan troglodytes clone rp43-10k8, complete sequence
          Length = 168095

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    agaggatctgcaggtgacct 292
              ||||||||||||||||||||
Sbjct: 131256 agaggatctgcaggtgacct 131237
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>dbj|AP008945.1| Oryzias latipes mitochondrial DNA, complete genome, isolate:
            Matsuyama
          Length = 16472

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  ataataccttcagttcccattcta 145
            ||||||||||||||| ||||||||
Sbjct: 8642 ataataccttcagttgccattcta 8665
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>dbj|AP008942.1| Oryzias latipes mitochondrial DNA, complete genome, isolate: Niigata
          Length = 16767

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  ataataccttcagttcccattcta 145
            ||||||||||||||| ||||||||
Sbjct: 8639 ataataccttcagttgccattcta 8662
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>dbj|AP008939.1| Oryzias latipes mitochondrial DNA, complete genome, isolate: HNI
          Length = 16745

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  ataataccttcagttcccattcta 145
            ||||||||||||||| ||||||||
Sbjct: 8639 ataataccttcagttgccattcta 8662
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>gb|AC115007.6| Mus musculus chromosome 5, clone RP24-188P11, complete sequence
          Length = 155084

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    agcatctgaataatacagat 75
             ||||||||||||||||||||
Sbjct: 14468 agcatctgaataatacagat 14487
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>gb|AC174451.3| Mus musculus BAC clone RP23-182A1 from chromosome 3, complete sequence
          Length = 205136

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    agcatctgaataatacagat 75
             ||||||||||||||||||||
Sbjct: 92439 agcatctgaataatacagat 92458
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>gb|AC116483.10| Mus musculus chromosome 1, clone RP23-424K5, complete sequence
          Length = 194546

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   tgtatctttatgaaactcaa 273
             ||||||||||||||||||||
Sbjct: 74887 tgtatctttatgaaactcaa 74906
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>gb|AC118544.7| Mus musculus strain C57BL/6J chromosome 5 clone rp23-287c8, complete
              sequence
          Length = 205079

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     agcatctgaataatacagat 75
              ||||||||||||||||||||
Sbjct: 145222 agcatctgaataatacagat 145241
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>dbj|AP004421.1| Oryzias latipes mitochondrial DNA, complete genome
          Length = 16714

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  ataataccttcagttcccattcta 145
            ||||||||||||||| ||||||||
Sbjct: 8642 ataataccttcagttgccattcta 8665
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>emb|AL008724.1|HSB107C2 Human DNA sequence from clone SC22CB-107C2 on chromosome 22q11.2-12.1,
             complete sequence
          Length = 44665

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   agaggatctgcaggtgacct 292
             ||||||||||||||||||||
Sbjct: 33223 agaggatctgcaggtgacct 33242
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>gb|AC140434.3| Mus musculus BAC clone RP24-105G15 from 3, complete sequence
          Length = 160839

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     agcatctgaataatacagat 75
              ||||||||||||||||||||
Sbjct: 122415 agcatctgaataatacagat 122434
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>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete
              sequence
          Length = 216611

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    atacactatactatacacac 119
              ||||||||||||||||||||
Sbjct: 164641 atacactatactatacacac 164660
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>dbj|AB051435.1| Homo sapiens mRNA for KIAA1648 protein, partial cds
          Length = 5851

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  agaggatctgcaggtgacct 292
            ||||||||||||||||||||
Sbjct: 4189 agaggatctgcaggtgacct 4208


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,612,566
Number of Sequences: 3902068
Number of extensions: 5612566
Number of successful extensions: 104381
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104263
Number of HSP's gapped (non-prelim): 118
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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