ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags34m04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 250 bits (126), Expect = 5e-63 Identities = 267/314 (85%) Strand = Plus / Minus Query: 376 tctctctcgctcacagctctagctgcttccttcaccaccagtttccccttgtgcttttca 435 |||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||| Sbjct: 884 tctctctcgctcacagctctaggcgcttcctttaccaccaatttccccttgtgtttttca 825 Query: 436 attgcctctgcgcaaacttttgttgcatttgtcagaactgctatcccctggtctttgtca 495 |||| ||| | ||| ||||| | ||||| | || |||| ||||| |||| |||||| Sbjct: 824 attgtctcgccacaagcttttatcgcattgttaaggactgagatcccttggtgcttgtca 765 Query: 496 agtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcacagggcaa 555 || || | |||||||| ||||||||||| | ||| |||||||| ||||||||||||||| Sbjct: 764 agagtttcagtggtcaggacataaagcggggcagcgactagcttgatcttcacagggcaa 705 Query: 556 tcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggacaccatca 615 || |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 704 tccttgtttccagctgcttcagctttcctcatggcttcctgaatgtggagaacaccatca 645 Query: 616 aactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtcattctc 675 | |||||||||||||| || | ||||||||| |||||| | || ||||| ||||||||| Sbjct: 644 tattggaagcatttcatgtcgatatcagcacgtatcttgtgcggttgtggcgtcattctc 585 Query: 676 ctccttatgttctt 689 |||||||||||||| Sbjct: 584 ctccttatgttctt 571
>gb|AY103903.1| Zea mays PCO078161 mRNA sequence Length = 1384 Score = 246 bits (124), Expect = 8e-62 Identities = 190/212 (89%) Strand = Plus / Minus Query: 484 tggtctttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatc 543 ||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 911 tggtccttgtcaagggtctgtgtggtcaaaacataaagtggaggagcaactagcttaatc 852 Query: 544 ttcacagggcaatcagcatttccagcagcttcagctttcctcatggcttccttaatgtgg 603 |||||||| || | | |||| || ||||||||||||||| |||| |||| |||||| ||| Sbjct: 851 ttcacaggacagttatcattgcccgcagcttcagctttcttcatagcttgcttaatatgg 792 Query: 604 aggacaccatcaaactggaagcatttcatctcaacatcagcacgaatcttgagtggctgt 663 || || |||||||||||||||||||||||||| | ||||||||| |||||||| |||||| Sbjct: 791 agcactccatcaaactggaagcatttcatctctatatcagcacggatcttgagaggctgt 732 Query: 664 ggtgtcattctcctccttatgttcttgaccag 695 |||||||| ||||||||||||||||| ||||| Sbjct: 731 ggtgtcatcctcctccttatgttcttaaccag 700
>gb|BT016294.1| Zea mays clone Contig127 mRNA sequence Length = 1270 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 713 ttgtcaagggtctgtgtggtcaaaacataaagtggaggagcaactagcttaatcttcaca 654 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggaca 609 || || | | |||| || ||||||||||||||| |||| |||| |||||| ||||| || Sbjct: 653 ggacagttatcattgcccgcagcttcagctttcttcatagcttgcttaatatggagcact 594 Query: 610 ccatcaaactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtc 669 |||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||| Sbjct: 593 ccatcaaactggaagcatttcatctctatatcagcacggatcttgagaggctgtggtgtc 534 Query: 670 attctcctccttatgttcttgaccag 695 || ||||||||||||||||| ||||| Sbjct: 533 atcctcctccttatgttcttaaccag 508
>dbj|AK104149.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D01, full insert sequence Length = 1348 Score = 242 bits (122), Expect = 1e-60 Identities = 266/314 (84%) Strand = Plus / Minus Query: 376 tctctctcgctcacagctctagctgcttccttcaccaccagtttccccttgtgcttttca 435 |||||||| ||||||||||| | ||||||||| || | || || ||||||||||| || Sbjct: 989 tctctctcactcacagctctcggtgcttccttaactatcaactttcccttgtgcttctcg 930 Query: 436 attgcctctgcgcaaacttttgttgcatttgtcagaactgctatcccctggtctttgtca 495 || | ||| |||| |||| |||||| || ||||||| || || ||||| |||||| Sbjct: 929 atctcagctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtca 870 Query: 496 agtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcacagggcaa 555 || || ||||||||||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 869 agagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcactggacaa 810 Query: 556 tcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggacaccatca 615 | | |||| |||||||||||||| ||||||||||||| ||||||||| || || |||||| Sbjct: 809 ttatcattaccagcagcttcagccttcctcatggcttgcttaatgtgaagcaccccatca 750 Query: 616 aactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtcattctc 675 || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 749 aattggaaacatttcatctcaacatcagcacggatcttaagtggctgtggtgtcatcctc 690 Query: 676 ctccttatgttctt 689 |||||||| ||||| Sbjct: 689 ctccttatattctt 676
>dbj|AK073460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F15, full insert sequence Length = 1454 Score = 242 bits (122), Expect = 1e-60 Identities = 266/314 (84%) Strand = Plus / Minus Query: 376 tctctctcgctcacagctctagctgcttccttcaccaccagtttccccttgtgcttttca 435 |||||||| ||||||||||| | ||||||||| || | || || ||||||||||| || Sbjct: 1073 tctctctcactcacagctctcggtgcttccttaactatcaactttcccttgtgcttctcg 1014 Query: 436 attgcctctgcgcaaacttttgttgcatttgtcagaactgctatcccctggtctttgtca 495 || | ||| |||| |||| |||||| || ||||||| || || ||||| |||||| Sbjct: 1013 atctcagctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtca 954 Query: 496 agtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcacagggcaa 555 || || ||||||||||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 953 agagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcactggacaa 894 Query: 556 tcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggacaccatca 615 | | |||| |||||||||||||| ||||||||||||| ||||||||| || || |||||| Sbjct: 893 ttatcattaccagcagcttcagccttcctcatggcttgcttaatgtgaagcaccccatca 834 Query: 616 aactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtcattctc 675 || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 833 aattggaaacatttcatctcaacatcagcacggatcttaagtggctgtggtgtcatcctc 774 Query: 676 ctccttatgttctt 689 |||||||| ||||| Sbjct: 773 ctccttatattctt 760
>dbj|AK105818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-D03, full insert sequence Length = 1377 Score = 234 bits (118), Expect = 3e-58 Identities = 265/314 (84%) Strand = Plus / Minus Query: 376 tctctctcgctcacagctctagctgcttccttcaccaccagtttccccttgtgcttttca 435 |||||||| ||||||||||| | ||||||||| || | || || |||||| |||| || Sbjct: 946 tctctctcactcacagctctcggtgcttccttaactatcaactttcccttgcgcttctcg 887 Query: 436 attgcctctgcgcaaacttttgttgcatttgtcagaactgctatcccctggtctttgtca 495 || | ||| |||| |||| |||||| || ||||||| || || ||||| |||||| Sbjct: 886 atctcagctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtca 827 Query: 496 agtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcacagggcaa 555 || || ||||||||||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 826 agagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcactggacaa 767 Query: 556 tcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggacaccatca 615 | | |||| |||||||||||||| ||||||||||||| ||||||||| || || |||||| Sbjct: 766 ttatcattaccagcagcttcagccttcctcatggcttgcttaatgtgaagcaccccatca 707 Query: 616 aactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtcattctc 675 || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 706 aattggaaacatttcatctcaacatcagcacggatcttaagtggctgtggtgtcatcctc 647 Query: 676 ctccttatgttctt 689 |||||||| ||||| Sbjct: 646 ctccttatattctt 633
>emb|AJ867288.1| Oryza sativa (indica cultivar-group) mRNA for eukaryotic translation initiation factor 2 alpha (eIF2 alpha gene) Length = 1020 Score = 234 bits (118), Expect = 3e-58 Identities = 265/314 (84%) Strand = Plus / Minus Query: 376 tctctctcgctcacagctctagctgcttccttcaccaccagtttccccttgtgcttttca 435 |||||||| ||||||||||| | ||||||||| || | || || |||||| |||| || Sbjct: 881 tctctctcactcacagctctcggtgcttccttaactatcaactttcccttgcgcttctcg 822 Query: 436 attgcctctgcgcaaacttttgttgcatttgtcagaactgctatcccctggtctttgtca 495 || | ||| |||| |||| |||||| || ||||||| || || ||||| |||||| Sbjct: 821 atctcagctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtca 762 Query: 496 agtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcacagggcaa 555 || || ||||||||||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 761 agagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcactggacaa 702 Query: 556 tcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggacaccatca 615 | | |||| |||||||||||||| ||||||||||||| ||||||||| || || |||||| Sbjct: 701 ttatcattaccagcagcttcagccttcctcatggcttgcttaatgtgaagcaccccatca 642 Query: 616 aactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtcattctc 675 || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 641 aattggaaacatttcatctcaacatcagcacggatcttaagtggctgtggtgtcatcctc 582 Query: 676 ctccttatgttctt 689 |||||||| ||||| Sbjct: 581 ctccttatattctt 568
>gb|BT013965.1| Lycopersicon esculentum clone 132990R, mRNA sequence Length = 1427 Score = 151 bits (76), Expect = 4e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 522 cggaggagcaactagcttaatcttcacagggcaatcagcatttccagcagcttcagcttt 581 |||||||||||| || ||||| || |||||||||||| |||| || |||||||||||||| Sbjct: 893 cggaggagcaacaagtttaattttaacagggcaatcatcattacccgcagcttcagcttt 834 Query: 582 cctcatggcttccttaatgtggaggacaccatcaaactggaagcatttcatctcaacatc 641 | ||| |||||||||||||| || |||||||||||||| || ||||||||||||| ||| Sbjct: 833 gcgcatagcttccttaatgtgaagaacaccatcaaactgaaaacatttcatctcaatatc 774 Query: 642 agcacgaatcttgagtggctgtggtgtcattctcctccttatgttctt 689 || |||||||| | ||||||||| |||||||| ||||| || ||||| Sbjct: 773 tgctcgaatcttcaatggctgtggagtcattcttctcctaatattctt 726
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 593 ccttaatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatct 652 |||||||||| || || |||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 10346362 ccttaatgtgaagcaccccatcaaattggaaacatttcatctcaacatcagcacggatct 10346303 Query: 653 tgagtggctgtggtgtcattctcctccttatgttctt 689 | ||||||||||||||||| ||||||||||| ||||| Sbjct: 10346302 taagtggctgtggtgtcatcctcctccttatattctt 10346266 Score = 117 bits (59), Expect = 5e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 10346541 ttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcact 10346482 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggctt 592 || |||| | |||| |||||||||||||| ||||||||||||| Sbjct: 10346481 ggacaattatcattaccagcagcttcagccttcctcatggctt 10346439 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 tcctcgtcgccgtcgacctcct 328 |||||||||||||||||||||| Sbjct: 32770078 tcctcgtcgccgtcgacctcct 32770099 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 gtcctcgtcgccgtcgacctcctc 329 ||||||||||||||||||| |||| Sbjct: 10589924 gtcctcgtcgccgtcgaccacctc 10589901
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 593 ccttaatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatct 652 |||||||||| || || |||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 2915 ccttaatgtgaagcaccccatcaaattggaaacatttcatctcaacatcagcacggatct 2856 Query: 653 tgagtggctgtggtgtcattctcctccttatgttctt 689 | ||||||||||||||||| ||||||||||| ||||| Sbjct: 2855 taagtggctgtggtgtcatcctcctccttatattctt 2819 Score = 117 bits (59), Expect = 5e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 3094 ttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcact 3035 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggctt 592 || |||| | |||| |||||||||||||| ||||||||||||| Sbjct: 3034 ggacaattatcattaccagcagcttcagccttcctcatggctt 2992
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 593 ccttaatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatct 652 |||||||||| || || |||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 59828 ccttaatgtgaagcaccccatcaaattggaaacatttcatctcaacatcagcacggatct 59769 Query: 653 tgagtggctgtggtgtcattctcctccttatgttctt 689 | ||||||||||||||||| ||||||||||| ||||| Sbjct: 59768 taagtggctgtggtgtcatcctcctccttatattctt 59732 Score = 117 bits (59), Expect = 5e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 60007 ttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcact 59948 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggctt 592 || |||| | |||| |||||||||||||| ||||||||||||| Sbjct: 59947 ggacaattatcattaccagcagcttcagccttcctcatggctt 59905
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 593 ccttaatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatct 652 |||||||||| || || |||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 10344463 ccttaatgtgaagcaccccatcaaattggaaacatttcatctcaacatcagcacggatct 10344404 Query: 653 tgagtggctgtggtgtcattctcctccttatgttctt 689 | ||||||||||||||||| ||||||||||| ||||| Sbjct: 10344403 taagtggctgtggtgtcatcctcctccttatattctt 10344367 Score = 117 bits (59), Expect = 5e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 10344642 ttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcact 10344583 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggctt 592 || |||| | |||| |||||||||||||| ||||||||||||| Sbjct: 10344582 ggacaattatcattaccagcagcttcagccttcctcatggctt 10344540 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 tcctcgtcgccgtcgacctcct 328 |||||||||||||||||||||| Sbjct: 32860588 tcctcgtcgccgtcgacctcct 32860609 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 gtcctcgtcgccgtcgacctcctc 329 ||||||||||||||||||| |||| Sbjct: 10588025 gtcctcgtcgccgtcgaccacctc 10588002
>ref|NM_120629.2| Arabidopsis thaliana EIF2 ALPHA; RNA binding AT5G05470 (EIF2 ALPHA) mRNA, complete cds Length = 1718 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 514 acataaagcggaggagcaactagcttaatcttcacagggcaatcagcatttccagcagct 573 |||||||| || |||||||| ||||| || || || || |||||| || | || |||| Sbjct: 876 acataaagtggtggagcaacgagcttgattttgactggacaatcatcagtacctacagcc 817 Query: 574 tcagctttcctcatggcttccttaatgtggaggacaccatcaaactggaagcatttcatc 633 || || ||| ||||||||||||| |||||||| || ||||||||||| || || |||| Sbjct: 816 tctgccttcttcatggcttccttgatgtggagaactccatcaaactgaaaacacttcaat 757 Query: 634 tcaacatcagcacgaatcttgagtggctgtggtgtcattctcctccttatgt 685 |||| ||||||||||||||| | |||||||||||||||||||||||| |||| Sbjct: 756 tcaatatcagcacgaatcttcattggctgtggtgtcattctcctcctaatgt 705
>gb|BT024879.1| Arabidopsis thaliana At5g05470 mRNA, complete cds Length = 1035 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 514 acataaagcggaggagcaactagcttaatcttcacagggcaatcagcatttccagcagct 573 |||||||| || |||||||| ||||| || || || || |||||| || | || |||| Sbjct: 755 acataaagtggtggagcaacgagcttgattttgactggacaatcatcagtacctacagcc 696 Query: 574 tcagctttcctcatggcttccttaatgtggaggacaccatcaaactggaagcatttcatc 633 || || ||| ||||||||||||| |||||||| || ||||||||||| || || |||| Sbjct: 695 tctgccttcttcatggcttccttgatgtggagaactccatcaaactgaaaacacttcaat 636 Query: 634 tcaacatcagcacgaatcttgagtggctgtggtgtcattctcctccttatgt 685 |||| ||||||||||||||| | |||||||||||||||||||||||| |||| Sbjct: 635 tcaatatcagcacgaatcttcattggctgtggtgtcattctcctcctaatgt 584
>gb|AF324988.2|AF324988 Arabidopsis thaliana AT5g05470 (AT5g05470/K18I23_28) mRNA, complete cds Length = 1280 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 514 acataaagcggaggagcaactagcttaatcttcacagggcaatcagcatttccagcagct 573 |||||||| || |||||||| ||||| || || || || |||||| || | || |||| Sbjct: 876 acataaagtggtggagcaacgagcttgattttgactggacaatcatcagtacctacagcc 817 Query: 574 tcagctttcctcatggcttccttaatgtggaggacaccatcaaactggaagcatttcatc 633 || || ||| ||||||||||||| |||||||| || ||||||||||| || || |||| Sbjct: 816 tctgccttcttcatggcttccttgatgtggagaactccatcaaactgaaaacacttcaat 757 Query: 634 tcaacatcagcacgaatcttgagtggctgtggtgtcattctcctccttatgt 685 |||| ||||||||||||||| | |||||||||||||||||||||||| |||| Sbjct: 756 tcaatatcagcacgaatcttcattggctgtggtgtcattctcctcctaatgt 705
>gb|AF353096.1|AF353096 Arabidopsis thaliana protein synthesis initiation factor eIF2 alpha mRNA, complete cds Length = 1274 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 514 acataaagcggaggagcaactagcttaatcttcacagggcaatcagcatttccagcagct 573 |||||||| || |||||||| ||||| || || || || |||||| || | || |||| Sbjct: 847 acataaagtggtggagcaacgagcttgattttgactggacaatcatcagtacctacagcc 788 Query: 574 tcagctttcctcatggcttccttaatgtggaggacaccatcaaactggaagcatttcatc 633 || || ||| ||||||||||||| |||||||| || ||||||||||| || || |||| Sbjct: 787 tctgccttcttcatggcttccttgatgtggagaactccatcaaactgaaaacacttcaat 728 Query: 634 tcaacatcagcacgaatcttgagtggctgtggtgtcattctcctccttatgt 685 |||| ||||||||||||||| | |||||||||||||||||||||||| |||| Sbjct: 727 tcaatatcagcacgaatcttcattggctgtggtgtcattctcctcctaatgt 676
>dbj|AK117513.1| Arabidopsis thaliana At5g05470 mRNA for putative eukaryotic translation initiation factor 2 alpha subunit, complete cds, clone: RAFL17-15-N10 Length = 1243 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 514 acataaagcggaggagcaactagcttaatcttcacagggcaatcagcatttccagcagct 573 |||||||| || |||||||| ||||| || || || || |||||| || | || |||| Sbjct: 870 acataaagtggtggagcaacgagcttgattttgactggacaatcatcagtacctacagcc 811 Query: 574 tcagctttcctcatggcttccttaatgtggaggacaccatcaaactggaagcatttcatc 633 || || ||| ||||||||||||| |||||||| || ||||||||||| || || |||| Sbjct: 810 tctgccttcttcatggcttccttgatgtggagaactccatcaaactgaaaacacttcaat 751 Query: 634 tcaacatcagcacgaatcttgagtggctgtggtgtcattctcctccttatgt 685 |||| ||||||||||||||| | |||||||||||||||||||||||| |||| Sbjct: 750 tcaatatcagcacgaatcttcattggctgtggtgtcattctcctcctaatgt 699
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 505 gtggtcagaacataaagcggaggagcaactagcttaatcttcacagggcaatcagcattt 564 |||||||| ||||||||||| | ||| |||||||| ||||||||||||||||| ||| Sbjct: 29423827 gtggtcaggacataaagcggggcagcgactagcttgatcttcacagggcaatccttgttt 29423886 Query: 565 ccagcagcttcagctttcctcatggcttcct 595 ||||| ||||||||||||||||||||||||| Sbjct: 29423887 ccagctgcttcagctttcctcatggcttcct 29423917 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 597 aatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatcttgag 656 ||||||||| ||||||||| | |||||||||||||| || | ||||||||| |||||| | Sbjct: 29423993 aatgtggagaacaccatcatattggaagcatttcatgtcgatatcagcacgtatcttgtg 29424052 Query: 657 tggctgtggtgtcattctcctccttatgttctt 689 || ||||| ||||||||||||||||||||||| Sbjct: 29424053 cggttgtggcgtcattctcctccttatgttctt 29424085 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 388 acagctctagctgcttccttcaccaccagtttccccttgtgcttttcaattg 439 |||||||||| |||||||| ||||||| |||||||||||| |||||||||| Sbjct: 29423101 acagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaattg 29423152
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 505 gtggtcagaacataaagcggaggagcaactagcttaatcttcacagggcaatcagcattt 564 |||||||| ||||||||||| | ||| |||||||| ||||||||||||||||| ||| Sbjct: 86749 gtggtcaggacataaagcggggcagcgactagcttgatcttcacagggcaatccttgttt 86808 Query: 565 ccagcagcttcagctttcctcatggcttcct 595 ||||| ||||||||||||||||||||||||| Sbjct: 86809 ccagctgcttcagctttcctcatggcttcct 86839 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 597 aatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatcttgag 656 ||||||||| ||||||||| | |||||||||||||| || | ||||||||| |||||| | Sbjct: 86915 aatgtggagaacaccatcatattggaagcatttcatgtcgatatcagcacgtatcttgtg 86974 Query: 657 tggctgtggtgtcattctcctccttatgttctt 689 || ||||| ||||||||||||||||||||||| Sbjct: 86975 cggttgtggcgtcattctcctccttatgttctt 87007 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 388 acagctctagctgcttccttcaccaccagtttccccttgtgcttttcaattg 439 |||||||||| |||||||| ||||||| |||||||||||| |||||||||| Sbjct: 86023 acagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaattg 86074
>emb|CR378662.1| M.truncatula DNA sequence from clone MTH2-41N19 on chromosome 3, complete sequence Length = 119227 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||| || || ||||| || |||||||||||||||||||| || ||||| |||||| Sbjct: 97768 ttgtcaagggtatgagtggtaagcacataaagcggaggagcaacaagtttaatattcaca 97709 Query: 550 gggcaatcagcatttccagcagcttcagctttcc 583 || || ||| ||||||||||||||||||| |||| Sbjct: 97708 ggacagtcatcatttccagcagcttcagccttcc 97675 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| ||||| || || ||||| || |||||||| || ||||| |||||| Sbjct: 106058 ttgtcaagtgtctgagtggtaagcacgtaaagtgggggagcaacaagtttaattttcaca 105999 Query: 550 gggcaatcagcatttccagcagcttcagctttcc 583 ||||| ||| ||||||||| ||||||||| |||| Sbjct: 105998 gggcagtcatcatttccagtagcttcagccttcc 105965 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||| ||||| ||||| || |||||||| || |||||||| || ||||| | |||| Sbjct: 111913 ttgtcaagggtctgagtggtaagcacataaagtgggggagcaacaagtttaatttccaca 111854 Query: 550 gggcaatcagcatttccagcagcttcagc 578 ||||| ||| ||||||||||||||||||| Sbjct: 111853 gggcagtcatcatttccagcagcttcagc 111825 Score = 50.1 bits (25), Expect = 0.010 Identities = 67/81 (82%) Strand = Plus / Minus Query: 593 ccttaatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatct 652 ||||||||||||| || |||||||| || || |||||||| |||| |||||| | ||| | Sbjct: 105838 ccttaatgtggagaactccatcaaattgaaaacatttcatttcaatatcagccctaattt 105779 Query: 653 tgagtggctgtggtgtcattc 673 | | |||||| || ||||||| Sbjct: 105778 tcattggctgaggagtcattc 105758 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 593 ccttaatgtggaggacaccatcaaactggaagcatttcatctcaa 637 ||||||||||||| || |||||||| || || |||||||| |||| Sbjct: 97560 ccttaatgtggagaactccatcaaattgaaaacatttcatttcaa 97516
>dbj|AB005241.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP10 Length = 57892 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 593 ccttaatgtggaggacaccatcaaactggaagcatttcatctcaacatcagcacgaatct 652 |||| |||||||| || ||||||||||| || || |||| |||| |||||||||||||| Sbjct: 161 ccttgatgtggagaactccatcaaactgaaaacacttcaattcaatatcagcacgaatct 102 Query: 653 tgagtggctgtggtgtcattctcctccttatgt 685 | | |||||||||||||||||||||||| |||| Sbjct: 101 tcattggctgtggtgtcattctcctcctaatgt 69
>ref|NM_129587.2| Arabidopsis thaliana RNA binding AT2G40290 transcript variant AT2G40290.1 mRNA, complete cds Length = 1464 Score = 87.7 bits (44), Expect = 5e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 944 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 885 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggaca 609 || || || |||||||||| |||||||| || |||| || ||||||||||| | || Sbjct: 884 ggacagtcttcatttccagcggcttcagcatttttcatagcctccttaatgtgaacaact 825 Query: 610 ccatcaaactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtc 669 ||||||||||| || || |||| || | |||||| || || || | ||| ||||||||| Sbjct: 824 ccatcaaactgaaaacacttcaattcgatatcagcccggattttcattggttgtggtgtc 765 Query: 670 attctcctccttatgttctt 689 ||||||||||| |||||||| Sbjct: 764 attctcctcctaatgttctt 745
>gb|AY117188.1| Arabidopsis thaliana putative eukaryotic translation initiation factor 2 alpha subunit eIF2 (At2g40290) mRNA, complete cds Length = 1066 Score = 87.7 bits (44), Expect = 5e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 779 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 720 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggaca 609 || || || |||||||||| |||||||| || |||| || ||||||||||| | || Sbjct: 719 ggacagtcttcatttccagcggcttcagcatttttcatagcctccttaatgtgaacaact 660 Query: 610 ccatcaaactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtc 669 ||||||||||| || || |||| || | |||||| || || || | ||| ||||||||| Sbjct: 659 ccatcaaactgaaaacacttcaattcgatatcagcccggattttcattggttgtggtgtc 600 Query: 670 attctcctccttatgttctt 689 ||||||||||| |||||||| Sbjct: 599 attctcctcctaatgttctt 580
>gb|AY080668.1| Arabidopsis thaliana putative eukaryotic translation initiation factor 2 alpha subunit eIF2 (At2g40290) mRNA, complete cds Length = 1418 Score = 87.7 bits (44), Expect = 5e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 944 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 885 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggaca 609 || || || |||||||||| |||||||| || |||| || ||||||||||| | || Sbjct: 884 ggacagtcttcatttccagcggcttcagcatttttcatagcctccttaatgtgaacaact 825 Query: 610 ccatcaaactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtc 669 ||||||||||| || || |||| || | |||||| || || || | ||| ||||||||| Sbjct: 824 ccatcaaactgaaaacacttcaattcgatatcagcccggattttcattggttgtggtgtc 765 Query: 670 attctcctccttatgttctt 689 ||||||||||| |||||||| Sbjct: 764 attctcctcctaatgttctt 745
>emb|BX819938.1|CNS0A9GN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 87.7 bits (44), Expect = 5e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 900 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 841 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggaca 609 || || || |||||||||| |||||||| || |||| || ||||||||||| | || Sbjct: 840 ggacagtcttcatttccagcggcttcagcatttttcatagcctccttaatgtgaacaact 781 Query: 610 ccatcaaactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtc 669 ||||||||||| || || |||| || | |||||| || || || | ||| ||||||||| Sbjct: 780 ccatcaaactgaaaacacttcaattcgatatcagcccggattttcattggttgtggtgtc 721 Query: 670 attctcctccttatgttctt 689 ||||||||||| |||||||| Sbjct: 720 attctcctcctaatgttctt 701
>gb|AY085202.1| Arabidopsis thaliana clone 13800 mRNA, complete sequence Length = 1402 Score = 87.7 bits (44), Expect = 5e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 944 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 885 Query: 550 gggcaatcagcatttccagcagcttcagctttcctcatggcttccttaatgtggaggaca 609 || || || |||||||||| |||||||| || |||| || ||||||||||| | || Sbjct: 884 ggacagtcttcatttccagcggcttcagcatttttcatagcctccttaatgtgaacaact 825 Query: 610 ccatcaaactggaagcatttcatctcaacatcagcacgaatcttgagtggctgtggtgtc 669 ||||||||||| || || |||| || | |||||| || || || | ||| ||||||||| Sbjct: 824 ccatcaaactgaaaacacttcaattcgatatcagcccggattttcattggttgtggtgtc 765 Query: 670 attctcctccttatgttctt 689 ||||||||||| |||||||| Sbjct: 764 attctcctcctaatgttctt 745
>ref|NM_201919.1| Arabidopsis thaliana RNA binding AT2G40290 transcript variant AT2G40290.2 mRNA, complete cds Length = 1552 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 1032 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 973 Query: 550 gggcaatcagcatttccagcagcttcagc 578 || || || |||||||||| |||||||| Sbjct: 972 ggacagtcttcatttccagcggcttcagc 944 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 661 tgtggtgtcattctcctccttatgttctt 689 |||||||||||||||||||| |||||||| Sbjct: 773 tgtggtgtcattctcctcctaatgttctt 745
>ref|NM_001036441.1| Arabidopsis thaliana RNA binding AT2G40290 transcript variant AT2G40290.3 mRNA, complete cds Length = 1551 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 1032 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 973 Query: 550 gggcaatcagcatttccagcagcttcagc 578 || || || |||||||||| |||||||| Sbjct: 972 ggacagtcttcatttccagcggcttcagc 944 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 661 tgtggtgtcattctcctccttatgttctt 689 |||||||||||||||||||| |||||||| Sbjct: 773 tgtggtgtcattctcctcctaatgttctt 745
>gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G21 map g4514, complete sequence Length = 82652 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 661 tgtggtgtcattctcctccttatgttctt 689 |||||||||||||||||||| |||||||| Sbjct: 19978 tgtggtgtcattctcctcctaatgttctt 20006 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Plus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 19719 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 19778 Query: 550 gggcaatcagcatttccagcagcttcagc 578 || || || |||||||||| |||||||| Sbjct: 19779 ggacagtcttcatttccagcggcttcagc 19807
>gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated gene cluster, complete sequence Length = 95713 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 661 tgtggtgtcattctcctccttatgttctt 689 |||||||||||||||||||| |||||||| Sbjct: 75028 tgtggtgtcattctcctcctaatgttctt 75056 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Plus Query: 490 ttgtcaagtgtctgtgtggtcagaacataaagcggaggagcaactagcttaatcttcaca 549 |||||||||||||| || || || ||||| || || |||||||| | |||||||| ||| Sbjct: 74769 ttgtcaagtgtctgagtagtaaggacatacagaggtggagcaaccaatttaatcttaaca 74828 Query: 550 gggcaatcagcatttccagcagcttcagc 578 || || || |||||||||| |||||||| Sbjct: 74829 ggacagtcttcatttccagcggcttcagc 74857
>gb|AC134540.3| Mus musculus BAC clone RP24-400M10 from chromosome 18, complete sequence Length = 189505 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 487 tctttgtcaagtgtctgtgtggt 509 ||||||||||||||||||||||| Sbjct: 172070 tctttgtcaagtgtctgtgtggt 172048
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 tcctcgtcgccgtcgacctcct 328 |||||||||||||||||||||| Sbjct: 109463 tcctcgtcgccgtcgacctcct 109442
>gb|AC148878.2| Chlamydomonas reinhardtii clone cr-29B2, complete sequence Length = 64153 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 tgtcctcctcctcgctgtcctc 311 |||||||||||||||||||||| Sbjct: 3344 tgtcctcctcctcgctgtcctc 3323
>gb|AY491395.1| Rattus norvegicus ras-related C3 botulinum toxin substrate 1 mRNA, complete cds Length = 792 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 cttcagcttctcaatcgtgtcc 360 |||||||||||||||||||||| Sbjct: 390 cttcagcttctcaatcgtgtcc 369
>emb|X56399.1|SCGGP1G S. cerevisiae GGP1 gene for glycoprotein gp115 Length = 2815 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 aaagcggaggagcaactagctt 539 |||||||||||||||||||||| Sbjct: 2216 aaagcggaggagcaactagctt 2195
>emb|CR688227.2|CNS0FTZJ Tetraodon nigroviridis full-length cDNA Length = 1135 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctcgtcgccgtcgacctcctc 329 ||||||||||| |||||||||||||||| ||||||| Sbjct: 445 tcctcctcctcctcgtcctcgtcgccgtcgtcctcctc 408
>emb|CR667946.2|CNS0FECW Tetraodon nigroviridis full-length cDNA Length = 1530 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctcgtcgccgtcgacctcctc 329 ||||||||||| |||||||||||||||| ||||||| Sbjct: 837 tcctcctcctcctcgtcctcgtcgccgtcgtcctcctc 800
>emb|Z49212.1|SC9952X S.cerevisiae chromosome XIII cosmid 9952 Length = 29286 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 aaagcggaggagcaactagctt 539 |||||||||||||||||||||| Sbjct: 23967 aaagcggaggagcaactagctt 23946
>ref|NM_134366.1| Rattus norvegicus ras-related C3 botulinum toxin substrate 1 (Rac1), mRNA Length = 792 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 cttcagcttctcaatcgtgtcc 360 |||||||||||||||||||||| Sbjct: 390 cttcagcttctcaatcgtgtcc 369
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 tgtcctcctcctcgctgtcctc 311 |||||||||||||||||||||| Sbjct: 920460 tgtcctcctcctcgctgtcctc 920439
>ref|NM_210363.1| Eremothecium gossypii AER150Wp (AER150W), mRNA Length = 1257 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 tgtcctcctcctcgctgtcctc 311 |||||||||||||||||||||| Sbjct: 328 tgtcctcctcctcgctgtcctc 307
>dbj|AK068731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158I01, full insert sequence Length = 1237 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 tcctcgtcgccgtcgacctcct 328 |||||||||||||||||||||| Sbjct: 544 tcctcgtcgccgtcgacctcct 523
>emb|X53424.1|SCGAS1 Yeast GAS1 gene for glycolipid anchored surface protein Length = 2401 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 aaagcggaggagcaactagctt 539 |||||||||||||||||||||| Sbjct: 1808 aaagcggaggagcaactagctt 1787
>gb|DQ332150.1| Synthetic construct Saccharomyces cerevisiae clone FLH201189.01X GAS1 gene, complete sequence Length = 1680 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 aaagcggaggagcaactagctt 539 |||||||||||||||||||||| Sbjct: 1397 aaagcggaggagcaactagctt 1376
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence Length = 159954 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cacctgctagcttcagcttct 349 ||||||||||||||||||||| Sbjct: 78018 cacctgctagcttcagcttct 77998
>ref|XM_814751.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504147.240) partial mRNA Length = 3552 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 gtcctcctcctcgctgtcctcgtcg 315 |||||||||||||||||| |||||| Sbjct: 3390 gtcctcctcctcgctgtcgtcgtcg 3366
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tcctcctcgctgtcctcgtcg 315 ||||||||||||||||||||| Sbjct: 3349065 tcctcctcgctgtcctcgtcg 3349085
>emb|X76713.1|ZMTRPA Z.mays (C6000237) trpA gene Length = 4796 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctcg 312 ||||||||||||||||||||| Sbjct: 1863 tcctcctcctcgctgtcctcg 1883
>gb|DQ124066.1| Coffea arabica clone MN-SSH2-G05 mRNA sequence Length = 439 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 ggaggagcaactagcttaatcttca 547 ||||||||||||| ||||||||||| Sbjct: 345 ggaggagcaactaccttaatcttca 369
>gb|AY254103.1| Zea mays clone ASJ-Bx1.1 indole synthase mRNA, complete cds Length = 1044 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctcg 312 ||||||||||||||||||||| Sbjct: 25 tcctcctcctcgctgtcctcg 45
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 aacaggaggaaaaaactaaca 183 ||||||||||||||||||||| Sbjct: 108920 aacaggaggaaaaaactaaca 108900
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 caaactggaagcatttcatct 634 ||||||||||||||||||||| Sbjct: 25162823 caaactggaagcatttcatct 25162803 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctcgtcg 315 |||||||||||||||| ||||||| Sbjct: 6112136 tcctcctcctcgctgtgctcgtcg 6112159
>dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0048L03 Length = 142377 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 caaactggaagcatttcatct 634 ||||||||||||||||||||| Sbjct: 109009 caaactggaagcatttcatct 108989
>dbj|AK106231.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B06, full insert sequence Length = 2027 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 caaactggaagcatttcatct 634 ||||||||||||||||||||| Sbjct: 1996 caaactggaagcatttcatct 1976
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 aacaggaggaaaaaactaaca 183 ||||||||||||||||||||| Sbjct: 141210 aacaggaggaaaaaactaaca 141190
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tcctcctcgctgtcctcgtcg 315 ||||||||||||||||||||| Sbjct: 3292768 tcctcctcgctgtcctcgtcg 3292748
>gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.215_E_13, complete sequence Length = 147416 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 actggaagcatttcatctcaa 637 ||||||||||||||||||||| Sbjct: 89692 actggaagcatttcatctcaa 89712
>gb|AC173483.1| Mus musculus BAC clone RP23-281C13 from chromosome 12, complete sequence Length = 182922 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cacctgctagcttcagcttct 349 ||||||||||||||||||||| Sbjct: 163288 cacctgctagcttcagcttct 163268
>ref|XM_517642.1| PREDICTED: Pan troglodytes similar to zinc finger protein 622; zinc finger-like protein 9 (LOC461736), mRNA Length = 1760 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 548 tcctcctcctcgctgtcctc 529
>gb|AC169382.2| Mus musculus chromosome 1, clone wi1-1860G10, complete sequence Length = 40385 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 agagaaaagcaaacaaatcc 88 |||||||||||||||||||| Sbjct: 689 agagaaaagcaaacaaatcc 708
>ref|NM_033414.2| Homo sapiens zinc finger protein 622 (ZNF622), mRNA Length = 1710 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 725 tcctcctcctcgctgtcctc 706
>ref|XM_323359.1| Neurospora crassa OR74A hypothetical protein (NCU04041.1) partial mRNA Length = 2418 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 1277 tcctcctcctcgctgtcctc 1258
>ref|XM_952563.1| Neurospora crassa OR74A hypothetical protein (NCU04041.1) partial mRNA Length = 2418 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 1277 tcctcctcctcgctgtcctc 1258
>gb|BC010545.1| Homo sapiens zinc finger protein 622, mRNA (cDNA clone MGC:17552 IMAGE:3463070), complete cds Length = 1695 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 714 tcctcctcctcgctgtcctc 695
>gb|BC008752.2| Homo sapiens zinc finger protein 622, mRNA (cDNA clone MGC:2485 IMAGE:3345757), complete cds Length = 1710 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 725 tcctcctcctcgctgtcctc 706
>gb|AC168853.1| Mus musculus BAC clone RP23-447G14 from chromosome 12, complete sequence Length = 188352 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 gctgcttccttcaccaccag 416 |||||||||||||||||||| Sbjct: 111464 gctgcttccttcaccaccag 111445
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 ctcctcctcgctgtcctcgtcgccgtcg 321 ||||||||||| ||||||||| |||||| Sbjct: 65657 ctcctcctcgccgtcctcgtcaccgtcg 65630
>ref|XM_540542.2| PREDICTED: Canis familiaris similar to DIPB protein (LOC483424), mRNA Length = 2510 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tcctcctcgctgtcctcgtc 314 |||||||||||||||||||| Sbjct: 791 tcctcctcgctgtcctcgtc 772
>ref|XM_758927.1| Theileria parva strain Muguga chromosome 4 hypothetical protein (TP04_0385) partial mRNA Length = 780 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 cagctttcctcatggcttcc 594 |||||||||||||||||||| Sbjct: 757 cagctttcctcatggcttcc 738
>gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, complete sequence Length = 70276 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 559 gcatttccagcagcttcagctttc 582 |||||||||||| ||||||||||| Sbjct: 13099 gcatttccagcaccttcagctttc 13122
>gb|AC091320.5| Homo sapiens BAC clone RP11-447A2 from 7, complete sequence Length = 179728 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tgcctcctcaaacaggagga 172 |||||||||||||||||||| Sbjct: 178879 tgcctcctcaaacaggagga 178860
>gb|AC099648.5| Homo sapiens BAC clone RP11-589K15 from 7, complete sequence Length = 69926 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tgcctcctcaaacaggagga 172 |||||||||||||||||||| Sbjct: 1151 tgcctcctcaaacaggagga 1132
>gb|AC158393.2| Mus musculus BAC clone RP23-368G21 from chromosome 14, complete sequence Length = 200173 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cagctctagctgcttccttc 408 |||||||||||||||||||| Sbjct: 146765 cagctctagctgcttccttc 146784
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 gtcctcgtcgccgtcgacctcctc 329 ||||||||||||||||||| |||| Sbjct: 6838 gtcctcgtcgccgtcgaccacctc 6815
>emb|Z98754.1|HS63M23 Human DNA sequence from clone RP1-63M23 on chromosome Xq13.1-21.1, complete sequence Length = 130594 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 ttcagctttcctcatggctt 592 |||||||||||||||||||| Sbjct: 130073 ttcagctttcctcatggctt 130054
>emb|AL691517.20| Human DNA sequence from clone XXyac-12DB5 on chromosome X Contains a pyruvate dehydrogenase kinase, isoenzyme 1 (PDK1) pseudogene, complete sequence Length = 174181 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 ttcagctttcctcatggctt 592 |||||||||||||||||||| Sbjct: 172703 ttcagctttcctcatggctt 172722
>ref|XM_795626.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC592688 (LOC592688), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 875 tcctcctcctcgctgtcctc 856
>emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on chromosome 9 Contains the 5' end of the SH2D3C gene for SH2 domain containing 3C (CHAT,NSP3), the CDK9 gene for cyclin-dependent kinase 9 (CDC2-related kinase) (TAK, C-2k, CDC2L4, PITALRE), the FPGS gene for folylpolyglutamate synthase (folylpolyglutamate synthetase), the 3' end fo the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1)(END, ORW, HHT1, ORW1, CD105), a novel gene and five CpG islands, complete sequence Length = 80642 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gtgcctcctcaaacaggagg 171 |||||||||||||||||||| Sbjct: 60350 gtgcctcctcaaacaggagg 60331
>emb|AL138914.9| Human DNA sequence from clone RP11-15L1 on chromosome 13 Contains part of a novel gene, complete sequence Length = 153439 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ctcagagaaaagcaaacaaa 85 |||||||||||||||||||| Sbjct: 62027 ctcagagaaaagcaaacaaa 62008
>emb|X91637.1|GGBRG1PRT G.gallus mRNA for BRG1 protein Length = 4893 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 4688 tcctcctcctcgctgtcctc 4669
>emb|BX897678.1| Neurospora crassa DNA linkage group VI BAC clone B10H18 Length = 74165 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 47949 tcctcctcctcgctgtcctc 47930
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 gtcctcgtcgccgtcgacctcctc 329 ||||||||||||||||||| |||| Sbjct: 145737 gtcctcgtcgccgtcgaccacctc 145714
>gb|AC104508.4| Drosophila melanogaster 3L BAC RP98-1O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgtcctcgtcgccgtcga 322 |||||||||||||||||||| Sbjct: 77605 gctgtcctcgtcgccgtcga 77586
>gb|AC091208.4| Drosophila melanogaster 3L BAC RP98-46N3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182705 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgtcctcgtcgccgtcga 322 |||||||||||||||||||| Sbjct: 108256 gctgtcctcgtcgccgtcga 108237
>emb|CR626791.1| full-length cDNA clone CS0DH005YL20 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1564 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 712 tcctcctcctcgctgtcctc 693
>emb|CR624583.1| full-length cDNA clone CS0DE008YM04 of Placenta of Homo sapiens (human) Length = 1651 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 711 tcctcctcctcgctgtcctc 692
>emb|CR624161.1| full-length cDNA clone CS0DA007YA22 of Neuroblastoma of Homo sapiens (human) Length = 1623 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 691 tcctcctcctcgctgtcctc 672
>emb|CR609231.1| full-length cDNA clone CS0DB006YC06 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1585 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 679 tcctcctcctcgctgtcctc 660
>emb|CR605829.1| full-length cDNA clone CS0DC027YH22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1646 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 691 tcctcctcctcgctgtcctc 672
>emb|CR604339.1| full-length cDNA clone CS0DI004YL04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1638 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 729 tcctcctcctcgctgtcctc 710
>gb|AC104147.4| Drosophila melanogaster X BAC RP98-33I18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170490 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 122313 cctcctcctcgctgtcctcg 122294
>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169618 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 37626 cctcctcctcgctgtcctcg 37607
>emb|CR599167.1| full-length cDNA clone CL0BB017ZD03 of Neuroblastoma of Homo sapiens (human) Length = 1673 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 708 tcctcctcctcgctgtcctc 689
>emb|CR591618.1| full-length cDNA clone CS0DK007YG24 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1686 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 732 tcctcctcctcgctgtcctc 713
>gb|AC020980.6| Homo sapiens chromosome 5 clone RPCI-1_167G20, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 164084 tcctcctcctcgctgtcctc 164103
>ref|NM_166917.1| Drosophila melanogaster CG11596-RB, transcript variant B (CG11596), mRNA Length = 1657 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 1230 cctcctcctcgctgtcctcg 1211
>ref|NM_166916.1| Drosophila melanogaster CG11596-RC, transcript variant C (CG11596), mRNA Length = 1803 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 1376 cctcctcctcgctgtcctcg 1357
>ref|NM_130607.2| Drosophila melanogaster CG11596-RA, transcript variant A (CG11596), mRNA Length = 1733 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 1306 cctcctcctcgctgtcctcg 1287
>gb|AY046059.1| Homo sapiens zinc finger-like protein 9 (ZPR9) mRNA, complete cds Length = 1702 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 736 tcctcctcctcgctgtcctc 717
>gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, complete sequence Length = 188570 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 161155 tcctcctcctcgctgtcctc 161136
>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown, complete sequence Length = 182200 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 116502 tcctcctcctcgctgtcctc 116483
>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete sequence Length = 157571 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cctcaaacaggaggaaaaaa 177 |||||||||||||||||||| Sbjct: 75161 cctcaaacaggaggaaaaaa 75142
>gb|AY051951.1| Drosophila melanogaster LD42227 full length cDNA Length = 1750 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 1306 cctcctcctcgctgtcctcg 1287
>gb|AC099617.13| Mus musculus chromosome 15, clone RP23-445J4, complete sequence Length = 180493 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tcctgtataaatgttgatga 24 |||||||||||||||||||| Sbjct: 54331 tcctgtataaatgttgatga 54350
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 gtccgcaaacagcttgtcgt 376 |||||||||||||||||||| Sbjct: 1232021 gtccgcaaacagcttgtcgt 1232002
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 ctcctcctcgctgtcctcgtcgccgtcg 321 ||||||||||| ||||||||| |||||| Sbjct: 14955870 ctcctcctcgccgtcctcgtcaccgtcg 14955843
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cgctgtcctcgtcgccgtcg 321 |||||||||||||||||||| Sbjct: 9883381 cgctgtcctcgtcgccgtcg 9883362
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cctcgctgtcctcgtcgccg 318 |||||||||||||||||||| Sbjct: 37316208 cctcgctgtcctcgtcgccg 37316227
>ref|XM_392300.2| PREDICTED: Apis mellifera similar to CG17941-PA (LOC408767), mRNA Length = 9924 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 tcctcctcgctgtcctcgtcgccg 318 |||||||||| ||||||||||||| Sbjct: 8780 tcctcctcgccgtcctcgtcgccg 8757
>gb|AC121609.3| Mus musculus BAC clone RP23-320N4 from chromosome 15, complete sequence Length = 195165 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tcctgtataaatgttgatga 24 |||||||||||||||||||| Sbjct: 121427 tcctgtataaatgttgatga 121446
>ref|NM_205059.1| Gallus gallus BRG1 protein (BRG1), mRNA Length = 4893 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 4688 tcctcctcctcgctgtcctc 4669
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cctcgctgtcctcgtcgccg 318 |||||||||||||||||||| Sbjct: 28242 cctcgctgtcctcgtcgccg 28261
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cctcgctgtcctcgtcgccg 318 |||||||||||||||||||| Sbjct: 153197 cctcgctgtcctcgtcgccg 153216
>gb|AC007385.3| Homo sapiens BAC clone RP11-325M10 from 2, complete sequence Length = 188062 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 acagggcaatcagcatttccagca 570 ||||||||| |||||||||||||| Sbjct: 13067 acagggcaaccagcatttccagca 13090
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctcgtcg 315 |||||||||||||||| ||||||| Sbjct: 25955 tcctcctcctcgctgtgctcgtcg 25978
>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644A02 Length = 144954 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctcgtcg 315 |||||||||||||||| ||||||| Sbjct: 116635 tcctcctcctcgctgtgctcgtcg 116658
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cgctgtcctcgtcgccgtcg 321 |||||||||||||||||||| Sbjct: 38828 cgctgtcctcgtcgccgtcg 38809
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cgctgtcctcgtcgccgtcg 321 |||||||||||||||||||| Sbjct: 66068 cgctgtcctcgtcgccgtcg 66049
>dbj|AK120019.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C01, full insert sequence Length = 1446 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cctcgctgtcctcgtcgccg 318 |||||||||||||||||||| Sbjct: 891 cctcgctgtcctcgtcgccg 910
>dbj|AK104975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A11, full insert sequence Length = 1004 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctcgtcg 315 |||||||||||||||| ||||||| Sbjct: 256 tcctcctcctcgctgtgctcgtcg 279
>dbj|AK073565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041B13, full insert sequence Length = 947 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctcgtcg 315 |||||||||||||||| ||||||| Sbjct: 260 tcctcctcctcgctgtgctcgtcg 283
>ref|NM_209753.1| Eremothecium gossypii ADR304Wp (ADR304W), mRNA Length = 1968 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 gtccgcaaacagcttgtcgt 376 |||||||||||||||||||| Sbjct: 486 gtccgcaaacagcttgtcgt 467
>emb|Z56794.1|HS140B3R H.sapiens CpG island DNA genomic Mse1 fragment, clone 140b3, reverse read cpg140b3.rt1a Length = 224 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tcctcctcctcgctgtcctc 311 |||||||||||||||||||| Sbjct: 71 tcctcctcctcgctgtcctc 90
>emb|CT009495.13| Mouse DNA sequence from clone RP23-127E21 on chromosome 14, complete sequence Length = 192786 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cagctctagctgcttccttc 408 |||||||||||||||||||| Sbjct: 78411 cagctctagctgcttccttc 78430
>gb|AE003564.3| Drosophila melanogaster chromosome 3L, section 21 of 83 of the complete sequence Length = 315944 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgtcctcgtcgccgtcga 322 |||||||||||||||||||| Sbjct: 179599 gctgtcctcgtcgccgtcga 179580
>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete sequence Length = 300933 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 164603 cctcctcctcgctgtcctcg 164584
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 ctcctcctcgctgtcctcgtcgccgtcg 321 ||||||||||| ||||||||| |||||| Sbjct: 15037565 ctcctcctcgccgtcctcgtcaccgtcg 15037538
>gb|U24253.1|HSFPGMS2 Human folylpolyglutamate synthetase (FPGS) gene, exons 5-11, and partial cds Length = 2630 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gtgcctcctcaaacaggagg 171 |||||||||||||||||||| Sbjct: 1694 gtgcctcctcaaacaggagg 1675
>gb|U40865.1|HSFPGS3 Human folylpolyglutamate synthetase gene, exons 9, 10, and 11, complete sequence Length = 1151 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gtgcctcctcaaacaggagg 171 |||||||||||||||||||| Sbjct: 477 gtgcctcctcaaacaggagg 458
>emb|AL808124.12| Mouse DNA sequence from clone RP23-146I4 on chromosome X, complete sequence Length = 162375 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 caccaccagtttccccttgt 427 |||||||||||||||||||| Sbjct: 7820 caccaccagtttccccttgt 7839
>emb|AL009191.1|DMC39E1 Drosophila melanogaster cosmid clone 39E1 Length = 34100 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cctcctcctcgctgtcctcg 312 |||||||||||||||||||| Sbjct: 2812 cctcctcctcgctgtcctcg 2793 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,489,711 Number of Sequences: 3902068 Number of extensions: 7489711 Number of successful extensions: 168657 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 167484 Number of HSP's gapped (non-prelim): 1164 length of query: 695 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 672 effective length of database: 17,143,297,704 effective search space: 11520296057088 effective search space used: 11520296057088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
