ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184331.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1043 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| |||||||||||||||| | |||||||||||||| |||||||| | |||||||||| Sbjct: 834 ccttcagcttggtcatccacccg-acgtactccttggtttgcttggtcaccatgtaatcg 776 Query: 565 tgcatgaagttggtgg 580 |||||| ||||||||| Sbjct: 775 tgcatgtagttggtgg 760
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| |||||||||||||||| | |||||||||||||| |||||||| | |||||||||| Sbjct: 2373781 ccttcagcttggtcatccacccg-acgtactccttggtttgcttggtcaccatgtaatcg 2373839 Query: 565 tgcatgaagttggtgg 580 |||||| ||||||||| Sbjct: 2373840 tgcatgtagttggtgg 2373855 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tatattagagtaggacggagggagta 211 ||||||||| |||||||||||||||| Sbjct: 1037164 tatattagaataggacggagggagta 1037139 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 taggacggagggagtaccag 215 |||||||||||||||||||| Sbjct: 7458936 taggacggagggagtaccag 7458917
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| |||||||||||||||| | |||||||||||||| |||||||| | |||||||||| Sbjct: 102831 ccttcagcttggtcatccacccg-acgtactccttggtttgcttggtcaccatgtaatcg 102889 Query: 565 tgcatgaagttggtgg 580 |||||| ||||||||| Sbjct: 102890 tgcatgtagttggtgg 102905
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| |||||||||||||||| | |||||||||||||| |||||||| | |||||||||| Sbjct: 157365 ccttcagcttggtcatccacccg-acgtactccttggtttgcttggtcaccatgtaatcg 157423 Query: 565 tgcatgaagttggtgg 580 |||||| ||||||||| Sbjct: 157424 tgcatgtagttggtgg 157439
>dbj|AK104561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C02, full insert sequence Length = 1102 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| |||||||||||||||| | |||||||||||||| |||||||| | |||||||||| Sbjct: 862 ccttcagcttggtcatccacccg-acgtactccttggtttgcttggtcaccatgtaatcg 804 Query: 565 tgcatgaagttggtgg 580 |||||| ||||||||| Sbjct: 803 tgcatgtagttggtgg 788
>dbj|AK104721.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A12, full insert sequence Length = 1043 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| |||||||||||||||| | |||||||||||||| |||||||| | |||||||||| Sbjct: 834 ccttcagcttggtcatccacccg-acgtactccttggtttgcttggtcaccatgtaatcg 776 Query: 565 tgcatgaagttggtgg 580 |||||| ||||||||| Sbjct: 775 tgcatgtagttggtgg 760
>dbj|AK066079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K21, full insert sequence Length = 1172 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| |||||||||||||||| | |||||||||||||| |||||||| | |||||||||| Sbjct: 863 ccttcagcttggtcatccacccg-acgtactccttggtttgcttggtcaccatgtaatcg 805 Query: 565 tgcatgaagttggtgg 580 |||||| ||||||||| Sbjct: 804 tgcatgtagttggtgg 789
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 133 atgttctactccctccgt-ccataatgtaagacgttattac 172 |||||||||||||||||| ||||||| |||||||||||||| Sbjct: 8082 atgttctactccctccgtcccataatataagacgttattac 8122
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 44.1 bits (22), Expect = 0.52 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 139 tactccctccgtcc-ataatgtaagacgtt 167 |||||||||||||| ||||||||||||||| Sbjct: 39706 tactccctccgtcccataatgtaagacgtt 39677
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 44.1 bits (22), Expect = 0.52 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 139 tactccctccgtcc-ataatgtaagacgtt 167 |||||||||||||| ||||||||||||||| Sbjct: 33524 tactccctccgtcccataatgtaagacgtt 33495
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tatattagagtaggacggagggagta 211 ||||||||| |||||||||||||||| Sbjct: 74832 tatattagaataggacggagggagta 74807
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tatattagagtaggacggagggagta 211 ||||||||| |||||||||||||||| Sbjct: 6478 tatattagaataggacggagggagta 6453
>gb|AY107101.1| Zea mays PCO079267 mRNA sequence Length = 1088 Score = 44.1 bits (22), Expect = 0.52 Identities = 62/74 (83%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 505 ccttgagcttggtcatccaccgggacgtactccttggtctgcttggtgatcatgtaatcg 564 |||| ||||| |||||||||||| | |||||||| | |||||| || | |||||||||| Sbjct: 875 ccttcagcttagtcatccaccgg-atgtactcctgagcctgcttagtcaccatgtaatcg 817 Query: 565 tgcatgaagttggt 578 ||||| ||||||| Sbjct: 816 tgcatatagttggt 803
>gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, complete sequence Length = 183724 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 agaacacaaatgaaactcactctgc 348 ||||||||| ||||||||||||||| Sbjct: 49409 agaacacaactgaaactcactctgc 49433
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 ggacggagggagtaccagata 218 ||||||||||||||||||||| Sbjct: 60740 ggacggagggagtaccagata 60760
>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete sequence Length = 211457 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ataaacatacaagtacaagta 36 ||||||||||||||||||||| Sbjct: 150490 ataaacatacaagtacaagta 150510
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 ggacggagggagtaccagata 218 ||||||||||||||||||||| Sbjct: 3401 ggacggagggagtaccagata 3421
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ataaacatacaagtacaagta 36 ||||||||||||||||||||| Sbjct: 54300 ataaacatacaagtacaagta 54280
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 gagtaggacggagggagtacc 213 ||||||||||||||||||||| Sbjct: 8756456 gagtaggacggagggagtacc 8756476 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ctactccctccgtccataatgtaa 161 |||||||||||||||| ||||||| Sbjct: 22161130 ctactccctccgtccagaatgtaa 22161153 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ctactccctccgtccataatgtaa 161 |||||||||||||||| ||||||| Sbjct: 15445654 ctactccctccgtccagaatgtaa 15445677 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 4586669 tactccctccgtccataatataag 4586646
>gb|AC117596.6| Mus musculus chromosome 6, clone RP23-392K24, complete sequence Length = 233811 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 caccagccatctccacatcag 116 ||||||||||||||||||||| Sbjct: 151809 caccagccatctccacatcag 151789
>gb|AC125368.7| Medicago truncatula clone mth2-13h15, complete sequence Length = 124271 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 ttattacgggacggagggggtatat 190 |||||||||||||||||| |||||| Sbjct: 111881 ttattacgggacggagggagtatat 111857
>gb|AC135797.13| Medicago truncatula clone mth2-11f7, complete sequence Length = 118242 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 ttattacgggacggagggggtatat 190 |||||||||||||||||| |||||| Sbjct: 105853 ttattacgggacggagggagtatat 105829
>gb|AC022024.7| Homo sapiens chromosome 10 clone RP11-432B10, complete sequence Length = 168862 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ataaacatacaagtacaagta 36 ||||||||||||||||||||| Sbjct: 58872 ataaacatacaagtacaagta 58852
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 gagtaggacggagggagtacc 213 ||||||||||||||||||||| Sbjct: 100107 gagtaggacggagggagtacc 100127
>gb|AC023869.5|AC023869 Homo sapiens chromosome 11, clone RP11-436B24, complete sequence Length = 181765 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ataaacatacaagtacaagta 36 ||||||||||||||||||||| Sbjct: 145523 ataaacatacaagtacaagta 145503
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ggacggagggagtaccagata 218 ||||||||||||||||||||| Sbjct: 29497751 ggacggagggagtaccagata 29497731 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 atgttctactccctccgtcca 153 ||||||||||||||||||||| Sbjct: 7636238 atgttctactccctccgtcca 7636218 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tctactccctccgtccataa 156 |||||||||||||||||||| Sbjct: 18645381 tctactccctccgtccataa 18645400 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 tattacgggacggagggggtatattaga 194 ||||| ||||||||||| |||||||||| Sbjct: 12417758 tattaggggacggagggagtatattaga 12417731 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 attacgggacggagggggtatattagag 195 |||| ||||||||||||||| ||||||| Sbjct: 4994246 attatgggacggagggggtaaattagag 4994219 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ctactccctccgtccataat 157 |||||||||||||||||||| Sbjct: 2706169 ctactccctccgtccataat 2706150 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ttctacaggatattttttca 308 |||||||||||||||||||| Sbjct: 20340 ttctacaggatattttttca 20359
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 ggacggagggagtaccagata 218 ||||||||||||||||||||| Sbjct: 22648202 ggacggagggagtaccagata 22648222
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 gagtaggacggagggagtacc 213 ||||||||||||||||||||| Sbjct: 8754291 gagtaggacggagggagtacc 8754311 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ctactccctccgtccataatgtaa 161 |||||||||||||||| ||||||| Sbjct: 22154159 ctactccctccgtccagaatgtaa 22154182 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ctactccctccgtccataatgtaa 161 |||||||||||||||| ||||||| Sbjct: 15440188 ctactccctccgtccagaatgtaa 15440211 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 4586784 tactccctccgtccataatataag 4586761
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ggacggagggagtaccagata 218 ||||||||||||||||||||| Sbjct: 1362273 ggacggagggagtaccagata 1362253 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gtaggacggagggagtacca 214 |||||||||||||||||||| Sbjct: 5965153 gtaggacggagggagtacca 5965172 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 798739 tactccctccgtccataatataag 798762
>gb|AC135168.8| Homo sapiens, clone CTD-2025E19, complete sequence Length = 125231 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ataaacatacaagtacaagta 36 ||||||||||||||||||||| Sbjct: 2161 ataaacatacaagtacaagta 2141
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ggacggagggagtaccagata 218 ||||||||||||||||||||| Sbjct: 43545 ggacggagggagtaccagata 43525
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ggacggagggagtaccagata 218 ||||||||||||||||||||| Sbjct: 24423 ggacggagggagtaccagata 24403
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 atgttctactccctccgtcca 153 ||||||||||||||||||||| Sbjct: 141648 atgttctactccctccgtcca 141628
>ref|XM_476339.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2132 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ttctacaggatattttttca 308 |||||||||||||||||||| Sbjct: 2070 ttctacaggatattttttca 2089
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 139 tactccctccgtcc-ataatgtaagacg 165 |||||||||||||| ||||||||||||| Sbjct: 19809 tactccctccgtcccataatgtaagacg 19836
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 55783 atgttctactccctccgtcc 55802
>gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, complete sequence Length = 175030 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 155420 tggaagtaacgcagctcgta 155439
>gb|AY692706.1| Saccharomyces cerevisiae clone FLH111283.01X YIL042C gene, complete cds Length = 1185 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 agctgctgatacaggactac 370 |||||||||||||||||||| Sbjct: 125 agctgctgatacaggactac 144
>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence Length = 183316 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 ggtgatcatgtaatcgtgca 568 |||||||||||||||||||| Sbjct: 111686 ggtgatcatgtaatcgtgca 111667
>gb|BC007139.1| Mus musculus ribosomal protein L22, mRNA (cDNA clone MGC:6121 IMAGE:3487607), complete cds Length = 485 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 378 tggaagtaacgcagctcgta 359
>gb|BC021344.1| Mus musculus ribosomal protein L22, mRNA (cDNA clone MGC:29121 IMAGE:4190569), complete cds Length = 2081 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 364 tggaagtaacgcagctcgta 345
>ref|NM_009079.2| Mus musculus ribosomal protein L22 (Rpl22), mRNA Length = 2081 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 364 tggaagtaacgcagctcgta 345
>gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060B06, complete sequence Length = 162568 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 82301 atgttctactccctccgtcc 82282
>ref|XR_003739.1| PREDICTED: Mus musculus hypothetical LOC432535 (LOC432535), mRNA Length = 456 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 369 tggaagtaacgcagctcgta 350
>ref|XM_974793.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L22 (Heparin-binding protein HBp15) (LOC669393), mRNA Length = 472 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 377 tggaagtaacgcagctcgta 358
>ref|XM_974415.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L22 (Heparin-binding protein HBp15) (LOC674400), mRNA Length = 472 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 377 tggaagtaacgcagctcgta 358
>ref|XM_146216.5| PREDICTED: Mus musculus similar to 60S ribosomal protein L22 (Heparin-binding protein HBp15) (LOC233991), mRNA Length = 454 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 359 tggaagtaacgcagctcgta 340
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ctactccctccgtccataatgtaa 161 |||||||||||||||| ||||||| Sbjct: 55872 ctactccctccgtccagaatgtaa 55849
>gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete sequence Length = 128294 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 126241 atgttctactccctccgtcc 126222
>gb|AC157789.5| Mus musculus chromosome 8, clone RP24-95E2, complete sequence Length = 203403 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 129644 tggaagtaacgcagctcgta 129625
>emb|AL391815.6| Human DNA sequence from clone RP11-223L24 on chromosome 6, complete sequence Length = 61274 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccagccatctccacatcagc 117 |||||||||||||||||||| Sbjct: 43194 ccagccatctccacatcagc 43175
>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a novel gene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 197634 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gaccaaacccttgagcttgg 516 |||||||||||||||||||| Sbjct: 147417 gaccaaacccttgagcttgg 147398
>gb|AF136171.1| Homo sapiens heparin-binding protein HBp15 mRNA, complete cds Length = 486 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 386 tggaagtaacgcagctcgta 367
>emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chromosome 6 Contains a novel gene, complete sequence Length = 148503 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ccagaagaacacaaatgaaa 338 |||||||||||||||||||| Sbjct: 121385 ccagaagaacacaaatgaaa 121366
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 774926 atgttctactccctccgtcc 774945
>emb|Z46861.1|SC9905 S.cerevisiae chromosome IX cosmid 9905 and lambda 6569 Length = 33954 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 agctgctgatacaggactac 370 |||||||||||||||||||| Sbjct: 11259 agctgctgatacaggactac 11240
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 123042 tactccctccgtccataatataag 123019
>emb|AL663044.5| Mouse DNA sequence from clone RP23-440I12 on chromosome 11 Contains part of a novel gene, complete sequence Length = 86761 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 72234 tggaagtaacgcagctcgta 72215
>tpg|BK003142.1| TPA: TPA_inf: Drosophila melanogaster HDC19000 (HDC19000) gene, complete cds Length = 1722 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 ggtgatcatgtaatcgtgca 568 |||||||||||||||||||| Sbjct: 327 ggtgatcatgtaatcgtgca 346
>gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, complete sequence Length = 189678 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 agctccagaagaacacaaat 334 |||||||||||||||||||| Sbjct: 67516 agctccagaagaacacaaat 67535
>dbj|AK169731.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430014D04 product:ribosomal protein L22, full insert sequence Length = 2054 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 371 tggaagtaacgcagctcgta 352
>dbj|AK168353.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730098F13 product:ribosomal protein L22, full insert sequence Length = 458 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 369 tggaagtaacgcagctcgta 350
>dbj|AK169078.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920079D07 product:ribosomal protein L22, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 358 tggaagtaacgcagctcgta 339
>gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosome 12, complete sequence Length = 155139 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tccagaagaacacaaatgaa 337 |||||||||||||||||||| Sbjct: 50953 tccagaagaacacaaatgaa 50972
>dbj|AK003022.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710007L22 product:ribosomal protein L22, full insert sequence Length = 460 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 371 tggaagtaacgcagctcgta 352
>dbj|AK009094.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310002H12 product:ribosomal protein L22, full insert sequence Length = 1999 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 372 tggaagtaacgcagctcgta 353
>gb|BC096390.1| Mus musculus ribosomal protein L22, mRNA (cDNA clone MGC:106868 IMAGE:1179671), complete cds Length = 635 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 514 tggaagtaacgcagctcgta 495
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 1827774 tactccctccgtccataatataag 1827751
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tctactccctccgtccataa 156 |||||||||||||||||||| Sbjct: 9272466 tctactccctccgtccataa 9272447
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 20539507 atgttctactccctccgtcc 20539488
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 774926 atgttctactccctccgtcc 774945
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 13955597 tactccctccgtccataatataag 13955620 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 taggacggagggagtaccag 215 |||||||||||||||||||| Sbjct: 1159538 taggacggagggagtaccag 1159557
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acggagggagtaccagatag 219 |||||||||||||||||||| Sbjct: 11404815 acggagggagtaccagatag 11404834
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 7592764 atgttctactccctccgtcc 7592783
>dbj|AB122083.1| Oryza sativa (japonica cultivar-group) DAHPS1 gene for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, exon 1-5, complete cds Length = 7765 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ctactccctccgtccataatgtaa 161 |||||||||||||||| ||||||| Sbjct: 6071 ctactccctccgtccagaatgtaa 6094
>gb|AF241791.1|AF241791 Perilla frutescens strain 32 limonene synthase gene, complete cds Length = 4315 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tattagagtaggacggagggagta 211 ||||| |||||||||||||||||| Sbjct: 3132 tattaaagtaggacggagggagta 3109
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ctactccctccgtccataatgtaa 161 |||||||||||||||| ||||||| Sbjct: 63732 ctactccctccgtccagaatgtaa 63709
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 taggacggagggagtaccag 215 |||||||||||||||||||| Sbjct: 119964 taggacggagggagtaccag 119945
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 taggacggagggagtaccag 215 |||||||||||||||||||| Sbjct: 7728 taggacggagggagtaccag 7709
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tctactccctccgtccataa 156 |||||||||||||||||||| Sbjct: 70435 tctactccctccgtccataa 70454
>dbj|AP004696.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475A09 Length = 143417 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acggagggagtaccagatag 219 |||||||||||||||||||| Sbjct: 142420 acggagggagtaccagatag 142439
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 7947 tactccctccgtccataatataag 7970
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 76870 tactccctccgtccataatataag 76893
>gb|AC009306.5| Homo sapiens BAC clone RP11-290K24 from 2, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 taaaaataatacctcataaa 20 |||||||||||||||||||| Sbjct: 21742 taaaaataatacctcataaa 21761
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 16019 atgttctactccctccgtcc 16038
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gtaggacggagggagtacca 214 |||||||||||||||||||| Sbjct: 143374 gtaggacggagggagtacca 143393
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 taggacggagggagtaccag 215 |||||||||||||||||||| Sbjct: 48132 taggacggagggagtaccag 48151
>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0613B07 Length = 191756 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 tattacgggacggagggggtatattaga 194 ||||| ||||||||||| |||||||||| Sbjct: 62040 tattaggggacggagggagtatattaga 62013
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 attacgggacggagggggtatattagag 195 |||| ||||||||||||||| ||||||| Sbjct: 35935 attatgggacggagggggtaaattagag 35908
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ctactccctccgtccataat 157 |||||||||||||||||||| Sbjct: 9730 ctactccctccgtccataat 9711
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ttctacaggatattttttca 308 |||||||||||||||||||| Sbjct: 19639 ttctacaggatattttttca 19658
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 109274 tactccctccgtccataatataag 109297
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 58071 tactccctccgtccataatataag 58094
>dbj|BS000068.1| Pan troglodytes chromosome 22 clone:RP43-046F21, map 22, complete sequences Length = 163689 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 acaaaatttcatcccatgtt 137 |||||||||||||||||||| Sbjct: 133863 acaaaatttcatcccatgtt 133844
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acggagggagtaccagatag 219 |||||||||||||||||||| Sbjct: 18804 acggagggagtaccagatag 18823
>dbj|AK066040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048L15, full insert sequence Length = 2131 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ttctacaggatattttttca 308 |||||||||||||||||||| Sbjct: 2069 ttctacaggatattttttca 2088
>dbj|AK061192.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F08, full insert sequence Length = 1294 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ttctacaggatattttttca 308 |||||||||||||||||||| Sbjct: 1259 ttctacaggatattttttca 1278
>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1048_C10 Length = 99194 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ctactccctccgtccataat 157 |||||||||||||||||||| Sbjct: 13180 ctactccctccgtccataat 13161
>emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on chromosome 12, complete sequence Length = 163039 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tccagaagaacacaaatgaa 337 |||||||||||||||||||| Sbjct: 6198 tccagaagaacacaaatgaa 6217
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete sequence Length = 341520 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 ggtgatcatgtaatcgtgca 568 |||||||||||||||||||| Sbjct: 204055 ggtgatcatgtaatcgtgca 204074
>dbj|AP001252.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-636L7, complete sequence Length = 91242 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 acaaaatttcatcccatgtt 137 |||||||||||||||||||| Sbjct: 62274 acaaaatttcatcccatgtt 62255
>dbj|D17653.1|MUSHBL2B Mus musculus mRNA for HBp15/L22, complete cds Length = 461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 369 tggaagtaacgcagctcgta 350
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 774923 atgttctactccctccgtcc 774942
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 atgttctactccctccgtcc 152 |||||||||||||||||||| Sbjct: 20849742 atgttctactccctccgtcc 20849723
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tctactccctccgtccataa 156 |||||||||||||||||||| Sbjct: 9272351 tctactccctccgtccataa 9272332
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tctactccctccgtccataa 156 |||||||||||||||||||| Sbjct: 166589 tctactccctccgtccataa 166608
>emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a17, COMPLETE SEQUENCE Length = 120704 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 164 cgttattacgggacggagggggtatatt 191 |||||||| ||||||||||| ||||||| Sbjct: 32055 cgttattatgggacggagggagtatatt 32028
>dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, fosmid clone:OSJNOa219C16 Length = 39990 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ttctacaggatattttttca 308 |||||||||||||||||||| Sbjct: 20340 ttctacaggatattttttca 20359
>emb|AL611985.22| Mouse DNA sequence from clone RP23-421E12 on chromosome 4, complete sequence Length = 219205 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggaagtaacgcagctcgta 248 |||||||||||||||||||| Sbjct: 73177 tggaagtaacgcagctcgta 73158
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 tactccctccgtccataatgtaag 162 ||||||||||||||||||| |||| Sbjct: 27624 tactccctccgtccataatataag 27601 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,792,497 Number of Sequences: 3902068 Number of extensions: 4792497 Number of successful extensions: 124630 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 118335 Number of HSP's gapped (non-prelim): 6289 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
