ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags35b01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF074969.1|AF074969 Triticum aestivum heat shock protein 70 (HSP70) mRNA, HSP70-S allele, complete cds Length = 1569 Score = 434 bits (219), Expect = e-118 Identities = 246/255 (96%) Strand = Plus / Minus Query: 340 cagctccaggggtagggccagatccctgctgctggtagagggactgaccaagctgcatca 399 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1278 cagctccaggggtagggcctgacccctgctgctggtagagggactgaccaagctgcatca 1219 Query: 400 cttcttggttcaacgcagctagtgcatcctttatcgtctctgtcgatccaccagcaacag 459 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 1218 cttcttggttcaacgcagctagtgcatcctttatcgtctgtgtcgatccaccagcaacgg 1159 Query: 460 cgtcctggagttccttgagcttcccctccaccttctccttgacatcgccggggaccttgt 519 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1158 cgacctggagttccttgagcttcccctccaccttctccttgacatcgcctgggaccttgt 1099 Query: 520 ctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctggttcttgg 579 | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1098 ccccgagctccttcagttgtttctcagtctggtagatcacagattctgcctggttcttgg 1039 Query: 580 tgtcaattgcgtccc 594 ||||||||||||||| Sbjct: 1038 tgtcaattgcgtccc 1024 Score = 176 bits (89), Expect = 5e-41 Identities = 123/133 (92%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 181 tactaggcaatcctgttgaacaaaatcatactcacttgttgcaccatgtcctaacctaca 240 |||||||||||| ||| ||||||| ||||||||||||||| || ||||||||||||||| Sbjct: 1442 tactaggcaatcatgtggaacaaattcatactcacttgtt-catcatgtcctaacctact 1384 Query: 241 gttctattcaattgctatcagtaaaatcagcgtctataacgtcaccaccatcgcctgtct 300 |||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| Sbjct: 1383 gttctattcaattgctgtcgataaaatcagcgtctatgacgtcaccaccatcgcctgtct 1324 Query: 301 tctcagatgggcc 313 ||||||||||||| Sbjct: 1323 tctcagatgggcc 1311 Score = 54.0 bits (27), Expect = 5e-04 Identities = 56/65 (86%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 114 tgaactctccaaacctccaacatcacgaactc---cgataccctgacaggagacaaggtc 170 ||||||||||||||||||||||||| ||||| | | |||||||||||| |||||||| Sbjct: 1533 tgaactctccaaacctccaacatcaaaaactcgtacaacaccctgacaggaaacaaggtc 1474 Query: 171 ccaat 175 |||| Sbjct: 1473 tcaat 1469
>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1234_D05, complete sequence Length = 107476 Score = 224 bits (113), Expect = 3e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 374 gtagagggactgaccaagctgcatcacttcttggttcaacgcagctagtgcatcctttat 433 |||||||| ||| || |||||||||||||| ||||||| ||||| || |||||||| || Sbjct: 37314 gtagagggcctgccccagctgcatcacttcctggttcagagcagcgagagcatccttcat 37255 Query: 434 cgtctctgtcgatccaccagcaacagcgtcctggagttccttgagcttcccctccacctt 493 ||||| |||||| ||||| ||||||||||||| ||| ||| | |||||| |||| ||||| Sbjct: 37254 cgtctgtgtcgagccacctgcaacagcgtccttgagctccgtcagcttcgcctcaacctt 37195 Query: 494 ctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtctggta 553 |||| |||||||| ||||||||||| || |||||||||| |||||||||||||||||| Sbjct: 37194 acccttcacatcgcctgggaccttgtcaccgagctccttcaattgtttctcagtctggta 37135 Query: 554 gatcacagactctgcctggttcttggtgtcaattgcgtccc 594 ||| |||||||||||||||||||||||||| |||||||||| Sbjct: 37134 gatgacagactctgcctggttcttggtgtcgattgcgtccc 37094
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 224 bits (113), Expect = 3e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 374 gtagagggactgaccaagctgcatcacttcttggttcaacgcagctagtgcatcctttat 433 |||||||| ||| || |||||||||||||| ||||||| ||||| || |||||||| || Sbjct: 13493268 gtagagggcctgccccagctgcatcacttcctggttcagagcagcgagagcatccttcat 13493209 Query: 434 cgtctctgtcgatccaccagcaacagcgtcctggagttccttgagcttcccctccacctt 493 ||||| |||||| ||||| ||||||||||||| ||| ||| | |||||| |||| ||||| Sbjct: 13493208 cgtctgtgtcgagccacctgcaacagcgtccttgagctccgtcagcttcgcctcaacctt 13493149 Query: 494 ctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtctggta 553 |||| |||||||| ||||||||||| || |||||||||| |||||||||||||||||| Sbjct: 13493148 acccttcacatcgcctgggaccttgtcaccgagctccttcaattgtttctcagtctggta 13493089 Query: 554 gatcacagactctgcctggttcttggtgtcaattgcgtccc 594 ||| |||||||||||||||||||||||||| |||||||||| Sbjct: 13493088 gatgacagactctgcctggttcttggtgtcgattgcgtccc 13493048
>dbj|AK060410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D10, full insert sequence Length = 1581 Score = 216 bits (109), Expect = 6e-53 Identities = 193/221 (87%) Strand = Plus / Minus Query: 374 gtagagggactgaccaagctgcatcacttcttggttcaacgcagctagtgcatcctttat 433 |||||||| ||| || |||||||||||||| |||||| ||||| || |||||||| || Sbjct: 1250 gtagagggcctgccccagctgcatcacttcctggttcggagcagcgagagcatccttcat 1191 Query: 434 cgtctctgtcgatccaccagcaacagcgtcctggagttccttgagcttcccctccacctt 493 ||||| |||||| ||||| ||||||||||||| ||| ||| | |||||| |||| ||||| Sbjct: 1190 cgtctgtgtcgagccacctgcaacagcgtccttgagctccgtcagcttcgcctcaacctt 1131 Query: 494 ctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtctggta 553 |||| |||||||| ||||||||||| || |||||||||| |||||||||||||||||| Sbjct: 1130 acccttcacatcgcctgggaccttgtcaccgagctccttcaattgtttctcagtctggta 1071 Query: 554 gatcacagactctgcctggttcttggtgtcaattgcgtccc 594 ||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1070 gatgacagactctgcctggttcttggtgtcgattgcgtccc 1030
>gb|AY108828.1| Zea mays PCO138532 mRNA sequence Length = 662 Score = 139 bits (70), Expect = 1e-29 Identities = 180/214 (84%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 374 gtagagggactgaccaagctgcatcacttcttggttcaacgcagctagtg-catccttta 432 |||||||||||| |||| |||||| ||||| |||||||| ||| ||| || | ||||| | Sbjct: 360 gtagagggactgcccaatctgcatgacttcctggttcaatgca-ctaatggcgtccttca 302 Query: 433 tcgtctctgtcgatccaccagcaacagcgtcctggagttccttgagcttcccctccacct 492 |||||| ||| || |||||||||||||| |||| ||| || | |||||| ||| |||| Sbjct: 301 tcgtctgtgtggagccaccagcaacagcatccttgagctcttgcagcttcgactcgacct 242 Query: 493 tctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtctggt 552 || ||||||| ||||| ||||||||||| || || ||||||||||||||||| ||||||| Sbjct: 241 tccccttgacgtcgcccgggaccttgtcccctagttccttcagttgtttctcggtctggt 182 Query: 553 agatcacagactctgcctggttcttggtgtcaat 586 | || || ||||| || ||||||||||||||||| Sbjct: 181 aaatgaccgactcggcttggttcttggtgtcaat 148
>gb|AY104911.1| Zea mays PCO138533 mRNA sequence Length = 1751 Score = 109 bits (55), Expect = 1e-20 Identities = 178/219 (81%) Strand = Plus / Minus Query: 374 gtagagggactgaccaagctgcatcacttcttggttcaacgcagctagtgcatcctttat 433 |||||||| ||| || | |||||| ||||| |||||||||||| | || ||||| || Sbjct: 1387 gtagagggcctgcccgatctgcatgacttcctggttcaacgcactcatggcgtccttcat 1328 Query: 434 cgtctctgtcgatccaccagcaacagcgtcctggagttccttgagcttcccctccacctt 493 ||||| || || |||||||||||||| |||| ||| || | |||||| ||| || || Sbjct: 1327 cgtctgcgtggagccaccagcaacagcatccttgagctcttgcagcttcgactcgacttt 1268 Query: 494 ctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtctggta 553 | ||||||| || || ||||||||||| || || ||||||||||| ||||| |||||||| Sbjct: 1267 ccccttgacgtcacctgggaccttgtcccctagttccttcagttgcttctcggtctggta 1208 Query: 554 gatcacagactctgcctggttcttggtgtcaattgcgtc 592 ||| || ||||| || ||||||||||||||||| ||||| Sbjct: 1207 gatgaccgactcggcttggttcttggtgtcaatggcgtc 1169
>gb|BT018142.1| Zea mays clone EL01N0555B07.c mRNA sequence Length = 1284 Score = 105 bits (53), Expect = 2e-19 Identities = 164/201 (81%) Strand = Plus / Minus Query: 392 ctgcatcacttcttggttcaacgcagctagtgcatcctttatcgtctctgtcgatccacc 451 |||||| ||||| |||||||||||| || | ||||| || |||| ||||| |||| Sbjct: 949 ctgcatgacttcctggttcaacgcacttatggggtccttcattgtctgcgtcgagccact 890 Query: 452 agcaacagcgtcctggagttccttgagcttcccctccaccttctccttgacatcgccggg 511 ||||||||| |||| ||| || | |||||| ||| || ||| ||||||| || || || Sbjct: 889 agcaacagcatccttgagctcttgcagcttcgactcgactttccccttgacgtcacctgg 830 Query: 512 gaccttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctg 571 ||||||||| ||||| ||||||||||| ||||| ||||||||||| || ||||| || || Sbjct: 829 gaccttgtccccaagttccttcagttgcttctcggtctggtagatgaccgactcggcttg 770 Query: 572 gttcttggtgtcaattgcgtc 592 ||||||||||||||| ||||| Sbjct: 769 gttcttggtgtcaatggcgtc 749
>gb|AY105690.1| Zea mays PCO065072 mRNA sequence Length = 1632 Score = 93.7 bits (47), Expect = 6e-16 Identities = 164/203 (80%) Strand = Plus / Minus Query: 387 ccaagctgcatcacttcttggttcaacgcagctagtgcatcctttatcgtctctgtcgat 446 |||| ||||||||| || ||||||| ||||| | ||||| || || ||| ||| ||| Sbjct: 1233 ccaatctgcatcacctcctggttcagagcagccatggcatctttcatactctgtgttgat 1174 Query: 447 ccaccagcaacagcgtcctggagttccttgagcttcccctccaccttctccttgacatcg 506 ||||||| || ||||| | ||| |||| ||||||| | ||||||||||| || ||| Sbjct: 1173 ccaccagaaatggcgtctttgagctcctggagcttcacatccaccttctctttcacagga 1114 Query: 507 ccggggaccttgtctccaagctccttcagttgtttctcagtctggtagatcacagactct 566 ||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 1113 gcggggactttgtcgccaagctccttcagttgcttctcagtctggtagaccacagaatcg 1054 Query: 567 gcctggttcttggtgtcaattgc 589 ||||| || || ||||| ||||| Sbjct: 1053 gcctgattttttgtgtcgattgc 1031
>gb|AY224466.1| Oryza sativa (japonica cultivar-group) isolate 23949 heat shock-related protein mRNA, partial cds Length = 1257 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 992 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 933 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 932 tttttggtatcaat 919
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 7990287 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 7990228 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 7990227 tttttggtatcaat 7990214
>dbj|AK121949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J07, full insert sequence Length = 2462 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 1883 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 1824 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 1823 tttttggtatcaat 1810
>dbj|AK119535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B03, full insert sequence Length = 1667 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 1112 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 1053 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 1052 tttttggtatcaat 1039
>dbj|AK072071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L16, full insert sequence Length = 2201 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 1628 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 1569 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 1568 tttttggtatcaat 1555
>dbj|AK069937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F19, full insert sequence Length = 1293 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 714 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 655 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 654 tttttggtatcaat 641
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 7990168 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 7990109 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 7990108 tttttggtatcaat 7990095
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||| || |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 9883 accttgtcacctagctccttcagttgcttctcagtctggtagaccacagagtctgcctgg 9942 Query: 573 ttcttggtgtcaat 586 || ||||| ||||| Sbjct: 9943 tttttggtatcaat 9956
>gb|BT016772.1| Zea mays clone Contig605 mRNA sequence Length = 1938 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 508 cggggaccttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctg 567 ||||||| || || ||||||||||||||||| |||||||||||||||| |||||| || | Sbjct: 1425 cggggactttatcgccaagctccttcagttgcttctcagtctggtagaccacagaatcgg 1366 Query: 568 cctggttcttggtgtcaattgc 589 |||| || || ||||||||||| Sbjct: 1365 cctgattttttgtgtcaattgc 1344
>gb|DQ224261.1| Aquilegia pyrenaica putative heat shock protein 70 (hsp70) gene, partial cds Length = 1268 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 489 accttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtc 548 ||||||||||||||||| | |||||||||||||| | |||||| || || ||||| ||| Sbjct: 1072 accttctccttgacatcagcagggaccttgtctcccaactccttgagctgcttctccgtc 1013 Query: 549 tggtagatcacagactctgcctggttcttggtgtcaat 586 ||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1012 tggtagacaacagaatctgcttggttctttgtgtcaat 975 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 378 agggactgaccaagctgcatcacttcttggtt 409 |||||||||||||||||||| ||||| ||||| Sbjct: 1183 agggactgaccaagctgcattacttcctggtt 1152
>gb|DQ224260.1| Aquilegia brevistyla putative heat shock protein 70 (hsp70) gene, partial cds Length = 1271 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 489 accttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtc 548 ||||||||||||||||| | |||||||||||||| | |||||| || || ||||| ||| Sbjct: 1075 accttctccttgacatcagcagggaccttgtctcccaactccttgagctgcttctccgtc 1016 Query: 549 tggtagatcacagactctgcctggttcttggtgtcaat 586 ||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1015 tggtagacaacagaatctgcttggttctttgtgtcaat 978
>gb|DQ224258.1| Aquilegia formosa putative heat shock protein 70 (hsp70) gene, partial cds Length = 1271 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 489 accttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtc 548 ||||||||||||||||| | |||||||||||||| | |||||| || || ||||| ||| Sbjct: 1075 accttctccttgacatcagcagggaccttgtctcccaactccttgagctgcttctccgtc 1016 Query: 549 tggtagatcacagactctgcctggttcttggtgtcaat 586 ||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1015 tggtagacaacagaatctgcttggttctttgtgtcaat 978
>gb|BT024111.1| Zea mays clone EL01N0516B01 mRNA sequence Length = 2060 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 508 cggggaccttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctg 567 ||||||| || || ||||||||||||||||| |||||||||||||||| |||||| || | Sbjct: 1589 cggggactttatcgccaagctccttcagttgcttctcagtctggtagaccacagaatcgg 1530 Query: 568 cctggttcttggtgtcaattgc 589 |||| || || ||||||||||| Sbjct: 1529 cctgattttttgtgtcaattgc 1508
>emb|X69213.1|PSST70 P.sativum Psst70 gene for heat-shock protein Length = 4974 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 486 tccaccttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctca 545 ||||||||||| || ||| | |||| || || ||||| ||||| |||| ||| |||||| Sbjct: 3494 tccaccttctctttaacaggggcgggaactttctctcctagctctttcaattgcttctca 3435 Query: 546 gtctggtagatcacagactctgcctggttcttggtgtcaattgcgtccc 594 |||||||||| ||||| |||||||||||||||||||| ||||| |||| Sbjct: 3434 gtctggtagacaacagagtctgcctggttcttggtgtcgattgcttccc 3386 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||||||||||||||| ||||| ||||| Sbjct: 3599 gactgaccaagctgcataacttcctggtt 3571
>gb|L03299.1|PEA70HSP Pisum sativum chloroplast stromal 70 kDa heat shock protein (hsp70) mRNA, complete cds Length = 2474 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 486 tccaccttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctca 545 ||||||||||| || ||| | |||| || || ||||| ||||| |||| ||| |||||| Sbjct: 1925 tccaccttctctttaacaggggcgggaactttctctcctagctctttcaattgcttctca 1866 Query: 546 gtctggtagatcacagactctgcctggttcttggtgtcaattgcgtccc 594 |||||||||| ||||| |||||||||||||||||||| ||||| |||| Sbjct: 1865 gtctggtagacaacagagtctgcctggttcttggtgtcgattgcttccc 1817 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||||||||||||||| ||||| ||||| Sbjct: 2030 gactgaccaagctgcataacttcctggtt 2002
>gb|DQ224263.1| Semiaquilegia adoxoides putative heat shock protein 70 (hsp70) gene, partial cds Length = 1268 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 489 accttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtc 548 |||||||||||||| || | |||||||||||||| |||||||| || || ||||| ||| Sbjct: 1072 accttctccttgacttcagcagggaccttgtctcccagctccttgagctgcttctccgtc 1013 Query: 549 tggtagatcacagactctgcctggttcttggtgtcaat 586 ||||||| ||||| ||||| || ||||| |||||||| Sbjct: 1012 tggtagacaacagaatctgcttgattctttgtgtcaat 975
>gb|DQ224262.1| Aquilegia olympica putative heat shock protein 70 (hsp70) gene, partial cds Length = 1269 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 489 accttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtc 548 ||||| ||||||||||| | |||||||||||||| | |||||| || || ||||| ||| Sbjct: 1073 accttttccttgacatcagcagggaccttgtctcccaactccttgagctgcttctccgtc 1014 Query: 549 tggtagatcacagactctgcctggttcttggtgtcaat 586 ||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1013 tggtagacaacagaatctgcttggttctttgtgtcaat 976
>gb|DQ224259.1| Aquilegia chrysantha putative heat shock protein 70 (hsp70) gene, partial cds Length = 1271 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 489 accttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtc 548 ||||||||||||||||| | |||||||||||||| | |||||| || || || || ||| Sbjct: 1075 accttctccttgacatcagcagggaccttgtctcccaactccttgagctgcttttccgtc 1016 Query: 549 tggtagatcacagactctgcctggttcttggtgtcaat 586 ||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1015 tggtagacaacagaatctgcttggttctttgtgtcaat 978
>gb|U92815.1|CLU92815 Citrullus lanatus heat shock protein 70 precursor mRNA, complete cds Length = 2430 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 |||||||||||||||||||||||||| ||||| ||||| || | ||||| || || ||| Sbjct: 1898 accttgtctccaagctccttcagttgcttctctgtctgatacacaacagaatcagcttgg 1839 Query: 573 ttcttggtgtc 583 ||||| ||||| Sbjct: 1838 ttcttcgtgtc 1828
>emb|X73961.1|CSHSP70 C.sativus mRNA for heat shock protein 70 (hsp70) Length = 2511 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 516 ttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctggttc 575 ||||||||||||||||||||||| ||||| ||||| || | ||||| || ||||||||| Sbjct: 1959 ttgtctccaagctccttcagttgcttctctgtctgatacacaacagaatcagcctggttc 1900 Query: 576 tt 577 || Sbjct: 1899 tt 1898
>gb|DQ224254.1| Aquilegia formosa heak shock protein 70 (HSP70) mRNA, partial cds Length = 548 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 489 accttctccttgacatcgccggggaccttgtctccaagctccttcagttgtttctcagtc 548 ||||||||||| ||| | | || ||||| ||||| | |||||| ||||||||||| ||| Sbjct: 352 accttctccttcacagcagcaggtaccttttctcccaactccttgagttgtttctctgtc 293 Query: 549 tggtagatcacagactctgcctggttcttggtgtcaat 586 ||||||| ||||| || || |||||||| |||||||| Sbjct: 292 tggtagacaacagaatcggcttggttctttgtgtcaat 255 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 378 agggactgaccaagctgcatcacttcttggtt 409 |||||||||||||||||||| ||||| ||||| Sbjct: 463 agggactgaccaagctgcattacttcctggtt 432
>gb|AY072744.1| Dunaliella salina heat shock protein 70B (hsp70B) mRNA, complete cds Length = 2732 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 533 cagttgtttctcagtctggtagatcacagactctgcctggttcttggtgtc 583 |||||| || |||||||||||||||| ||||||||||||||||||||| Sbjct: 1776 cagttgcttttcagtctggtagatcatgctctctgcctggttcttggtgtc 1726
>gb|AC140550.31| Medicago truncatula clone mth2-54a24, complete sequence Length = 129388 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 513 accttgtctccaagctccttcagttgtttctcagtctggtagatcacagactctgcctgg 572 ||||| ||||| ||||| |||| ||| || ||||||||||||| ||||| || ||||| Sbjct: 28897 accttttctcctagctctttcaattgcttttcagtctggtagacaacagagtccgcctga 28838 Query: 573 ttcttggtgtcaattgcgtccc 594 ||||| ||||| ||||| |||| Sbjct: 28837 ttctttgtgtctattgcatccc 28816
>dbj|AB181295.1| Nicotiana benthamiana Hsp70 mRNA for heat shock protein 70, partial cds, clone:NbHsp70cp-1 Length = 741 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggttcaacgcagc 418 ||||| || |||||||| |||||||||||||||||||| Sbjct: 587 gactgtcccagctgcatgacttcttggttcaacgcagc 550
>ref|NM_118561.2| Arabidopsis thaliana CPHSC70-1; ATP binding AT4G24280 (CPHSC70-1) mRNA, complete cds Length = 2456 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 |||||||||| |||||||||||||||||| Sbjct: 2121 gactgaccaatctgcatcacttcttggtt 2093
>gb|AY072138.1| Arabidopsis thaliana putative hsp 70 protein (At4g24280) mRNA, complete cds Length = 2495 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 |||||||||| |||||||||||||||||| Sbjct: 2122 gactgaccaatctgcatcacttcttggtt 2094
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 |||||||||| |||||||||||||||||| Sbjct: 44346 gactgaccaatctgcatcacttcttggtt 44318
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 |||||||||| |||||||||||||||||| Sbjct: 61003 gactgaccaatctgcatcacttcttggtt 60975
>gb|BT001950.1| Arabidopsis thaliana clone U19959 putative hsp 70 protein (At4g24280) mRNA, complete cds Length = 2188 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 |||||||||| |||||||||||||||||| Sbjct: 2015 gactgaccaatctgcatcacttcttggtt 1987
>emb|AL034399.6|HS191P20 Human DNA sequence from clone RP6-191P20 on chromosome Xq23 Contains the TEX13B gene for testis expressed sequence 13B, a novel pseudogene, the 3' end of the MID2 gene for midline 2 (FXY2, RNF60, TRIM1), a novel gene and a CpG island, complete sequence Length = 118456 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 526 gctccttcagttgtttctcagtctggt 552 |||||||||||||| |||||||||||| Sbjct: 24846 gctccttcagttgtgtctcagtctggt 24820
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete sequence Length = 119311 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 526 gctccttcagttgtttctcagtctggt 552 |||||||||||||| |||||||||||| Sbjct: 51509 gctccttcagttgtgtctcagtctggt 51535
>emb|CR391911.15| Zebrafish DNA sequence from clone DKEYP-26A9 in linkage group 1, complete sequence Length = 194115 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatttttctgttgcatttgt 42 |||||||||||||||||||||| Sbjct: 157467 tatatttttctgttgcatttgt 157488
>ref|XM_734475.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000461.00.0) partial mRNA Length = 489 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 atatttttctgttgcatttgtt 43 |||||||||||||||||||||| Sbjct: 156 atatttttctgttgcatttgtt 177
>emb|CR388402.15| Zebrafish DNA sequence from clone DKEY-97I21 in linkage group 1, complete sequence Length = 155300 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatttttctgttgcatttgt 42 |||||||||||||||||||||| Sbjct: 88901 tatatttttctgttgcatttgt 88922
>ref|NM_124369.2| Arabidopsis thaliana cpHSC70-2 (HEAT SHOCK PROTEIN 70-7); ATP binding AT5G49910 (cpHSC70-2) mRNA, complete cds Length = 2731 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||| |||| |||||||||||||||||| Sbjct: 2071 gactggccaatctgcatcacttcttggtt 2043
>ref|NM_124370.3| Arabidopsis thaliana unknown protein AT5G49920 mRNA, complete cds Length = 1876 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||| |||| |||||||||||||||||| Sbjct: 1711 gactggccaatctgcatcacttcttggtt 1739
>gb|AY766104.1| Dengue virus type 3 strain Singapore 8120/95, complete genome Length = 10696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY665402.1| Dengue virus type 3 polyprotein gene, partial cds Length = 1923 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 620 cttgtctccaagctccttcag 600
>gb|AY632355.1| Dengue virus type 3 isolate AM2394 from Brazil polyprotein gene, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY662691.1| Dengue virus type 3 from Singapore, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|BT000919.1| Arabidopsis thaliana clone C105236 putative heat shock protein 70 (At5g49910) mRNA, complete cds Length = 2187 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||| |||| |||||||||||||||||| Sbjct: 2015 gactggccaatctgcatcacttcttggtt 1987
>gb|AY099336.1| Dengue virus type 3 isolate D3/H/IMTSSA-SRI/2000/1266, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AF547260.1| Dengue virus type 3 612210 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547242.1| Dengue virus type 3 L57 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547241.1| Dengue virus type 3 073 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547240.1| Dengue virus type 3 SOM079 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547239.1| Dengue virus type 3 251991 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547238.1| Dengue virus type 3 1559 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547237.1| Dengue virus type 3 1558 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547236.1| Dengue virus type 3 1557 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547235.1| Dengue virus type 3 D9397 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547234.1| Dengue virus type 3 D5231 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547233.1| Dengue virus type 3 D3197 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547232.1| Dengue virus type 3 D2803 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547231.1| Dengue virus type 3 D2863 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547230.1| Dengue virus type 3 D2783 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547229.1| Dengue virus type 3 D1440 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547228.1| Dengue virus type 3 D1336 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547227.1| Dengue virus type 3 D1307 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547226.1| Dengue virus type 3 D1306 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AF547225.1| Dengue virus type 3 D1266 polyprotein gene, partial cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 616 cttgtctccaagctccttcag 596
>gb|AY080761.1| Arabidopsis thaliana At5g49910 mRNA sequence Length = 2331 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||| |||| |||||||||||||||||| Sbjct: 2071 gactggccaatctgcatcacttcttggtt 2043
>emb|AJ271605.2|DSA271605 Dunaliella salina mRNA for chloroplast-localised heat shock protein (hsp70B gene) Length = 2764 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 540 ttctcagtctggtagatcacagactctgcctggttcttggt 580 ||||| ||||||||||||| |||||||||||||||||| Sbjct: 1825 ttctccgtctggtagatcatgctctctgcctggttcttggt 1785
>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence Length = 215502 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tatatttttctgttgcatttgttca 45 |||||||||||||| |||||||||| Sbjct: 128858 tatatttttctgtttcatttgttca 128834
>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown, complete sequence Length = 199332 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 ccgtcagctccagctccaggg 350 ||||||||||||||||||||| Sbjct: 144619 ccgtcagctccagctccaggg 144639
>gb|DQ401695.1| Dengue virus type 3 isolate mutant PhMH-J1-97, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|DQ401694.1| Dengue virus type 3 isolate mutant InJ-I6-82, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|DQ401693.1| Dengue virus type 3 isolate mutant BDH02-07, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|DQ401692.1| Dengue virus type 3 isolate mutant BDH02-04, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|DQ401691.1| Dengue virus type 3 isolate mutant BDH02-03, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|DQ401690.1| Dengue virus type 3 isolate InJ-16-82, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|DQ401689.1| Dengue virus type 3 isolate mutant BDH02-01, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY496878.1| Dengue virus type 3 isolate BDH02-8 polyprotein gene, partial cds Length = 3033 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY496876.1| Dengue virus type 3 isolate BDH02-6 polyprotein gene, partial cds Length = 3033 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY496875.1| Dengue virus type 3 isolate BDH02-5 polyprotein gene, partial cds Length = 3033 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY496872.1| Dengue virus type 3 isolate BDH02-2 polyprotein gene, partial cds Length = 3033 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY496871.2| Dengue virus type 3 isolate BDH02-1, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY496873.2| Dengue virus type 3 isolate BDH02-3, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY496874.2| Dengue virus type 3 isolate BDH02-4, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY496877.2| Dengue virus type 3 isolate BDH02-7, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY496879.2| Dengue virus type 3 isolate PhMH-J1-97, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>dbj|AB214882.1| Dengue virus type 3 genomic RNA, neally complete genome, strain:D3/Hu/TL129NIID/2005 Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>dbj|AB214881.1| Dengue virus type 3 genomic RNA, neally complete genome, strain:D3/Hu/TL109NIID/2005 Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>dbj|AB214880.1| Dengue virus type 3 genomic RNA, neally complete genome, strain:D3/Hu/TL029NIID/2005 Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>dbj|AB214879.1| Dengue virus type 3 genomic RNA, neally complete genome, strain:D3/Hu/TL018NIID/2005 Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY960633.1| Dengue virus type 3 isolate RGN576 polyprotein gene, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY960632.1| Dengue virus type 3 isolate MTO3103 polyprotein gene, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY960629.1| Dengue virus type 3 isolate CEA4739 polyprotein gene, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY960628.1| Dengue virus type 3 isolate Bel73318 polyprotein gene, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AY265857.1| Dengue virus type 3 isolate NAMRU-2 98901620 polyprotein gene, partial cds Length = 2207 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 510 cttgtctccaagctccttcag 490
>gb|AY265856.1| Dengue virus type 3 isolate NAMRU-2 98901413 polyprotein gene, partial cds Length = 2207 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 510 cttgtctccaagctccttcag 490
>gb|AY923865.1| Dengue virus type 3 strain C0360/94, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY912458.1| Dengue virus type 3 strain KPS-4-0657/207 polyprotein mRNA, partial cds Length = 3469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY912455.1| Dengue virus type 3 strain 98901640 polyprotein mRNA, partial cds Length = 3469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY912454.1| Dengue virus type 3 strain 98901590 polyprotein mRNA, partial cds Length = 3469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AF217459.1|AF217459 Arabidopsis thaliana heat shock protein 70 (Hsc70-7) mRNA, complete cds; nuclear gene for chloroplast product Length = 2157 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||| |||| |||||||||||||||||| Sbjct: 2015 gactggccaatctgcatcacttcttggtt 1987
>gb|AF349753.1|AF349753 Dengue virus type 3 strain PaH881/88 polyprotein precursor, prM-E genes, partial cds Length = 2150 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 454 cttgtctccaagctccttcag 434
>gb|AF317645.1|AF317645 Dengue virus type 3 strain 80-2, complete genome Length = 10696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>dbj|AB189127.1| Dengue virus type 3 genomic RNA, complete genome, strain: 98901517 DHF DV-3 Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>dbj|AB189126.1| Dengue virus type 3 genomic RNA, complete genome, strain: 98901437 DSS DV-3 Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>dbj|AB189125.1| Dengue virus type 3 genomic RNA, complete genome, strain: 98901403 DSS DV-3 Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>emb|AL935144.11| Zebrafish DNA sequence from clone CH211-89B14 in linkage group 23, complete sequence Length = 155322 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tacagttctattcaattgcta 257 ||||||||||||||||||||| Sbjct: 44112 tacagttctattcaattgcta 44092
>dbj|AB024032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9P8 Length = 70670 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 gactgaccaagctgcatcacttcttggtt 409 ||||| |||| |||||||||||||||||| Sbjct: 36113 gactggccaatctgcatcacttcttggtt 36085
>emb|AJ563355.1|DVI563355 Dengue virus type 3 proviral partial gene for polyprotein, genomic RNA Length = 2348 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 542 cttgtctccaagctccttcag 522
>gb|M93130.1|DENCME Dengue type 3 virus complete genome RNA, complete cds Length = 10696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY676353.1| Dengue virus type 3 strain ThD3_0007_87, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY676352.1| Dengue virus type 3 strain ThD3_0010_87, complete genome Length = 10709 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY676351.1| Dengue virus type 3 strain ThD3_0055_93, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY676350.1| Dengue virus type 3 strain ThD3_0104_93, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY676349.1| Dengue virus type 3 strain ThD3_1283_98, complete genome Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY676348.1| Dengue virus type 3 strain ThD3_1687_98, complete genome Length = 10702 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence Length = 192484 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 525 agctccttcagttgtttctcagtct 549 |||||||||| |||||||||||||| Sbjct: 116930 agctccttcatttgtttctcagtct 116954
>gb|M86733.1|DENENVAA Dengue virus type 3 structural proteins, complete cds Length = 2297 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 663 cttgtctccaagctccttcag 643
>gb|AY858048.1| Dengue virus type 3 strain TB55i, complete genome Length = 10697 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY858047.1| Dengue virus type 3 strain TB16, complete genome Length = 10658 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 764 cttgtctccaagctccttcag 744
>gb|AY858046.1| Dengue virus type 3 strain PI64, complete genome Length = 10699 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 786 cttgtctccaagctccttcag 766
>gb|AY858045.1| Dengue virus type 3 strain PH86, complete genome Length = 10695 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 793 cttgtctccaagctccttcag 773
>gb|AY858044.1| Dengue virus type 3 strain KJ71, complete genome Length = 10685 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 783 cttgtctccaagctccttcag 763
>gb|AY858042.1| Dengue virus type 3 strain KJ30i, complete genome Length = 10690 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|AY858041.1| Dengue virus type 3 strain FW06, complete genome Length = 10687 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 783 cttgtctccaagctccttcag 763
>gb|AY858040.1| Dengue virus type 3 strain FW01, complete genome Length = 10704 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 792 cttgtctccaagctccttcag 772
>gb|AY858039.1| Dengue virus type 3 strain den3_98, complete genome Length = 10661 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 783 cttgtctccaagctccttcag 763
>gb|AY858037.1| Dengue virus type 3 strain BA51, complete genome Length = 10705 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 792 cttgtctccaagctccttcag 772
>gb|M25277.1|DENSP5AA Dengue virus type 3 5' region of the genome encoding structural proteins Length = 3000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 794 cttgtctccaagctccttcag 774
>gb|L11620.1|DENENVGLYW Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>dbj|AB010990.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain Z026 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010989.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM181 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010988.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM180 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010987.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM119 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010986.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM098 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010985.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM091 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010984.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM086 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010983.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM068 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>dbj|AB010982.1| Dengue virus type 3 RNA for polyprotein (C/C'/preM/M/E region), partial cds, strain JM006 Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 700 cttgtctccaagctccttcag 680
>gb|L11427.1|DENENVGLYF Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11442.1|DENENVGLYU Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11441.1|DENENVGLYT Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11439.1|DENENVGLYR Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11438.1|DENENVGLYQ Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11437.1|DENENVGLYP Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11436.1|DENENVGLYO Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11435.1|DENENVGLYN Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11434.1|DENENVGLYM Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11433.1|DENENVGLYL Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11431.1|DENENVGLYJ Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11430.1|DENENVGLYI Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11429.1|DENENVGLYH Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11428.1|DENENVGLYG Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11426.1|DENENVGLYE Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11425.1|DENENVGLYD Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|L11423.1|DENENVGLYB Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttcag 535 ||||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttcag 338
>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence Length = 216271 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 agctccttcagttgtttctc 544 |||||||||||||||||||| Sbjct: 116707 agctccttcagttgtttctc 116726
>ref|XM_517100.1| PREDICTED: Pan troglodytes similar to actin filament associated protein; actin filament-associated protein, 110 kDa (LOC461110), mRNA Length = 2649 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 2327 ccgtcagctccagctccagg 2308
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ccaccttctccttgacatcg 506 |||||||||||||||||||| Sbjct: 461214 ccaccttctccttgacatcg 461195
>gb|AE017129.1| Yersinia pestis biovar Medievalis str. 91001 section 3 of 16 of the complete genome Length = 290002 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctccttcagttgtttctca 545 |||||||||||||||||||| Sbjct: 138274 gctccttcagttgtttctca 138293
>gb|AC159249.3| Mus musculus BAC clone RP24-177C7 from chromosome y, complete sequence Length = 146406 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 32465 tttatgatatatatttttct 32446
>gb|AC147625.3| Mus musculus BAC clone RP24-348P17 from chromosome Y, complete sequence Length = 176911 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 76074 tttatgatatatatttttct 76055
>gb|AC147105.2| Mus musculus BAC clone RP24-66E5 from chromosome Y, complete sequence Length = 223344 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 163875 tttatgatatatatttttct 163856
>gb|AC145602.3| Mus musculus BAC clone RP24-240M7 from chromosome Y, complete sequence Length = 160337 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 134099 tttatgatatatatttttct 134118
>gb|AC146597.3| Mus musculus BAC clone RP24-230I13 from chromosome Y, complete sequence Length = 181426 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 112347 tttatgatatatatttttct 112328
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctccttcagttgtttctca 545 |||||||||||||||||||| Sbjct: 1039240 gctccttcagttgtttctca 1039259
>gb|AC182456.2| Mus musculus BAC clone RP24-65H21 from chromosome y, complete sequence Length = 194102 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 109407 tttatgatatatatttttct 109388
>gb|AC147709.1| Mus musculus BAC clone RP24-97E15 from chromosome Y, complete sequence Length = 197983 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 174328 tttatgatatatatttttct 174309
>gb|AC144646.3| Mus musculus BAC clone RP24-388P5 from chromosome Y, complete sequence Length = 151248 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 66035 tttatgatatatatttttct 66016
>gb|AC092129.3| Homo sapiens chromosome 16 clone RP11-140O8, complete sequence Length = 190333 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 tctccttgacatcgccgggg 512 |||||||||||||||||||| Sbjct: 103364 tctccttgacatcgccgggg 103383
>ref|XM_570650.1| Cryptococcus neoformans var. neoformans JEC21 translation repressor (CND01700) partial mRNA Length = 4559 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ccaccttctccttgacatcg 506 |||||||||||||||||||| Sbjct: 3909 ccaccttctccttgacatcg 3890
>gb|BC014113.1| Homo sapiens hypothetical protein LOC254848, mRNA (cDNA clone IMAGE:4544270), with apparent retained intron Length = 2136 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 330 ccgtcagctccagctccagg 349
>gb|AC121941.3| Mus musculus BAC clone RP24-209I3 from chromosome 2, complete sequence Length = 165818 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 agctccttcagttgtttctc 544 |||||||||||||||||||| Sbjct: 122438 agctccttcagttgtttctc 122457
>gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosome 13, complete sequence Length = 177675 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tatgatatatatttttctgt 33 |||||||||||||||||||| Sbjct: 72147 tatgatatatatttttctgt 72166
>gb|AC112254.6| Homo sapiens BAC clone RP11-1156I21 from 4, complete sequence Length = 91840 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1890 ccgtcagctccagctccagg 1909
>gb|AC024607.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-240H6, complete sequence Length = 197273 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 96792 ctgctgctgggagagggactgacc 96815
>gb|AC117190.3| Mus musculus BAC clone RP23-55A21 from 2, complete sequence Length = 189549 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 agctccttcagttgtttctc 544 |||||||||||||||||||| Sbjct: 104350 agctccttcagttgtttctc 104331
>ref|XM_545904.2| PREDICTED: Canis familiaris similar to actin filament associated protein (LOC488786), mRNA Length = 2574 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 2179 ccgtcagctccagctccagg 2160
>gb|BC011471.1| Mus musculus B-cell CLL/lymphoma 7B, mRNA (cDNA clone MGC:18340 IMAGE:3660754), complete cds Length = 1638 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 1133 ctgctgctgggagagggactgacc 1156
>gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, complete sequence Length = 215769 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 cttcccctccaccttctcct 498 |||||||||||||||||||| Sbjct: 29961 cttcccctccaccttctcct 29942
>gb|AC151532.3| Mus musculus BAC clone RP24-279A12 from chromosome y, complete sequence Length = 158231 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 5698 tttatgatatatatttttct 5717
>gb|BC043614.2| Homo sapiens hypothetical protein LOC254848, mRNA (cDNA clone IMAGE:6050645), partial cds Length = 3021 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 776 ccgtcagctccagctccagg 795
>gb|AC175492.4| Mus musculus BAC clone RP24-76P21 from chromosome y, complete sequence Length = 203854 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 190676 tttatgatatatatttttct 190657
>emb|AL354993.24| Human DNA sequence from clone RP5-823G15 on chromosome 20q13.2-13.3 Contains the PPIAL2 gene for peptidylprolyl isomerase A (cyclophilin A)-like 2 (pseudogene) and the 3' end of the gene for a novel protein (FLJ33887), complete sequence Length = 106736 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 tgagcttcccctccaccttc 494 |||||||||||||||||||| Sbjct: 21865 tgagcttcccctccaccttc 21846
>gb|AC091397.2| Rattus norvegicus strain Brown Norway clone RP31-246E3, complete sequence Length = 73920 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 57043 ctgctgctggaagagggactgacc 57066
>gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-160L19, complete sequence Length = 165686 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 7266 ctgctgctggaagagggactgacc 7289
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctccttcagttgtttctca 545 |||||||||||||||||||| Sbjct: 1033689 gctccttcagttgtttctca 1033708
>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13 Length = 94349 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tagtgatttatgatatatattttt 29 |||||||||||||||| ||||||| Sbjct: 49942 tagtgatttatgatatgtattttt 49965
>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20 Length = 220050 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 gctccttcagttgtttctca 545 |||||||||||||||||||| Sbjct: 59323 gctccttcagttgtttctca 59304
>gb|AC153135.5| Mus musculus BAC clone RP24-181M6 from chromosome 13, complete sequence Length = 164002 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cttcccctccaccttctcct 498 |||||||||||||||||||| Sbjct: 58360 cttcccctccaccttctcct 58379
>gb|AC142261.5| Mus musculus BAC clone RP24-469C3 from chromosome unknown, complete sequence Length = 179858 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 36741 tttatgatatatatttttct 36722
>gb|AC182038.2| Mus musculus BAC clone RP24-95H15 from chromosome y, complete sequence Length = 183498 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 19866 tttatgatatatatttttct 19847
>dbj|AK127962.1| Homo sapiens cDNA FLJ46074 fis, clone TESTI2001915, highly similar to Homo sapiens actin filament associated protein (AFAP) Length = 1638 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1159 ccgtcagctccagctccagg 1140
>emb|CR606819.1| full-length cDNA clone CS0DI066YF01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 693 ccgtcagctccagctccagg 674
>gb|AC112233.3| Homo sapiens BAC clone RP11-211G17 from 4, complete sequence Length = 51878 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 atttatgatatatatttttc 30 |||||||||||||||||||| Sbjct: 27280 atttatgatatatatttttc 27261
>emb|CR594181.1| full-length cDNA clone CS0DL005YK22 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2434 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 706 ccgtcagctccagctccagg 725
>gb|AC182366.4| Mus musculus BAC clone RP24-360I14 from chromosome y, complete sequence Length = 154476 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 88653 tttatgatatatatttttct 88634
>dbj|AK131643.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1520401C12 product:B-cell CLL/lymphoma 7B, full insert sequence Length = 1555 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 1052 ctgctgctgggagagggactgacc 1075
>gb|AF404306.1| Rhizophydium sp. 136 mitochondrion, complete genome Length = 68834 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 atttatgatatatatttttc 30 |||||||||||||||||||| Sbjct: 10172 atttatgatatatatttttc 10191
>gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome y, complete sequence Length = 155247 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 80974 tttatgatatatatttttct 80955
>gb|AC177799.3| Mus musculus BAC clone RP24-374O22 from chromosome y, complete sequence Length = 128487 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 37536 tttatgatatatatttttct 37555
>dbj|AK155076.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630119L09 product:B-cell CLL/lymphoma 7B, full insert sequence Length = 1550 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 1038 ctgctgctgggagagggactgacc 1061
>gb|AY063759.1| Rattus norvegicus actin filament associated protein (Afap) mRNA, complete cds Length = 2911 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1915 ccgtcagctccagctccagg 1896
>gb|AC182447.2| Mus musculus BAC clone RP24-476M3 from chromosome y, complete sequence Length = 175402 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 167922 tttatgatatatatttttct 167941
>gb|AC163279.6| Mus musculus BAC clone RP24-112D16 from chromosome y, complete sequence Length = 198421 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 1311 tttatgatatatatttttct 1330
>gb|AC175663.3| Mus musculus BAC clone RP24-430F7 from chromosome y, complete sequence Length = 144867 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 13483 tttatgatatatatttttct 13502
>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 tccaagctccttcagttgtttctc 544 ||||||||||||||||| |||||| Sbjct: 8410 tccaagctccttcagttctttctc 8387
>gb|AC158653.7| Mus musculus 6 BAC RP23-418F10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185818 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 tccaagctccttcagttgtttctc 544 ||||||||||||||||| |||||| Sbjct: 130021 tccaagctccttcagttctttctc 129998
>ref|NM_198595.1| Homo sapiens actin filament associated protein (AFAP), transcript variant 2, mRNA Length = 7484 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 2118 ccgtcagctccagctccagg 2099
>gb|AC127261.3| Mus musculus BAC clone RP24-316F4 from chromosome unknown, complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 119024 tttatgatatatatttttct 119043
>ref|NM_021638.3| Homo sapiens actin filament associated protein (AFAP), transcript variant 1, mRNA Length = 7496 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 2130 ccgtcagctccagctccagg 2111
>gb|AC084593.1|CBRG42E09 Caenorhabditis briggsae cosmid G42E09, complete sequence Length = 41984 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tgcaaatagctgaaaaacaa 88 |||||||||||||||||||| Sbjct: 11349 tgcaaatagctgaaaaacaa 11330
>emb|BX936249.1| Gallus gallus finished cDNA, clone ChEST958k14 Length = 1216 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tagaacaagcatgcaaatag 77 |||||||||||||||||||| Sbjct: 1090 tagaacaagcatgcaaatag 1071
>emb|BX935075.1| Gallus gallus finished cDNA, clone ChEST74n16 Length = 1604 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tagaacaagcatgcaaatag 77 |||||||||||||||||||| Sbjct: 492 tagaacaagcatgcaaatag 473
>emb|BX931963.1| Gallus gallus finished cDNA, clone ChEST802g11 Length = 1613 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tagaacaagcatgcaaatag 77 |||||||||||||||||||| Sbjct: 500 tagaacaagcatgcaaatag 481
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 cttgacatcgccggggaccttgtc 520 |||||| ||||||||||||||||| Sbjct: 5480652 cttgacctcgccggggaccttgtc 5480629
>gb|AF188700.1|AF188700 Homo sapiens actin filament associated protein (AFAP) mRNA, complete cds Length = 7279 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1912 ccgtcagctccagctccagg 1893
>ref|NM_080900.1| Rattus norvegicus actin filament associated protein (Afap), mRNA Length = 2911 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1915 ccgtcagctccagctccagg 1896
>ref|XM_579609.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_080900 (LOC497697), mRNA Length = 2239 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1915 ccgtcagctccagctccagg 1896
>gb|AC129774.4| Mus musculus BAC clone RP24-167G16 from chromosome y, complete sequence Length = 168396 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 9256 tttatgatatatatttttct 9275
>dbj|AK219291.1| Mus musculus cDNA, clone:Y2G0148A06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000031692, based on BLAT search Length = 357 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 333 ctgctgctgggagagggactgacc 356
>gb|BC032777.1| Homo sapiens actin filament associated protein, transcript variant 2, mRNA (cDNA clone MGC:44840 IMAGE:4914388), complete cds Length = 2458 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1936 ccgtcagctccagctccagg 1917
>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20, complete sequence Length = 170767 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aatagctgaaaaacaatgca 92 |||||||||||||||||||| Sbjct: 85475 aatagctgaaaaacaatgca 85456
>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence Length = 189805 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 111 ccgtcagctccagctccagg 92
>gb|AF096709.1|AF096709 Drosophila virilis tyrosyl-tRNA synthetase gene, partial cds; and failed axon connections protein (fax) gene, complete cds Length = 15911 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tttatgatatatatttttctgttg 35 |||||||||||||||||| ||||| Sbjct: 13100 tttatgatatatatttttatgttg 13123
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 tgtcctaacctacagttctattca 250 |||||||||| ||||||||||||| Sbjct: 145049 tgtcctaaccgacagttctattca 145072
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 agttgtttctcagtctggta 553 |||||||||||||||||||| Sbjct: 1734060 agttgtttctcagtctggta 1734079
>emb|AL845497.10| Mouse DNA sequence from clone RP23-232K9 on chromosome 2, complete sequence Length = 157619 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 agctccttcagttgtttctc 544 |||||||||||||||||||| Sbjct: 74143 agctccttcagttgtttctc 74162
>gb|AC147108.3| Mus musculus BAC clone RP24-70D19 from 13, complete sequence Length = 188893 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tatgatatatatttttctgt 33 |||||||||||||||||||| Sbjct: 151418 tatgatatatatttttctgt 151437
>gb|AC148329.3| Mus musculus BAC clone RP24-176F13 from Y, complete sequence Length = 149159 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 77108 tttatgatatatatttttct 77089
>gb|AC147630.4| Mus musculus BAC clone RP24-530L22 from Y, complete sequence Length = 180127 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttatgatatatatttttct 31 |||||||||||||||||||| Sbjct: 107319 tttatgatatatatttttct 107300
>ref|NM_009745.1| Mus musculus B-cell CLL/lymphoma 7B (Bcl7b), mRNA Length = 1546 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 1036 ctgctgctgggagagggactgacc 1059
>dbj|AB209676.1| Homo sapiens mRNA for actin filament associated protein variant protein Length = 2260 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccgtcagctccagctccagg 349 |||||||||||||||||||| Sbjct: 1638 ccgtcagctccagctccagg 1619
>emb|AJ011145.1|MMU011145 Mus musculus mRNA for protein encoded by BCL7B gene Length = 1546 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctgctgctggtagagggactgacc 388 |||||||||| ||||||||||||| Sbjct: 1036 ctgctgctgggagagggactgacc 1059
>emb|AL929187.5| Mouse DNA sequence from clone RP23-8G6 on chromosome 2, complete sequence Length = 145146 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 agctccttcagttgtttctc 544 |||||||||||||||||||| Sbjct: 35755 agctccttcagttgtttctc 35736
>emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chromosome X, complete sequence Length = 218939 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 ctattcaattgctatcagtaaaat 267 ||||||||||||||||||| |||| Sbjct: 17938 ctattcaattgctatcagtcaaat 17915
>gb|L11440.1|DENENVGLYS Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ttgtctccaagctccttcag 535 |||||||||||||||||||| Sbjct: 357 ttgtctccaagctccttcag 338
>gb|L11424.1|DENENVGLYC Dengue virus type 3 membrane protein (prM/M)/envelope glycoprotein (E) polyprotein mRNA, partial cds Length = 1977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 cttgtctccaagctccttca 534 |||||||||||||||||||| Sbjct: 358 cttgtctccaagctccttca 339 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,925,685 Number of Sequences: 3902068 Number of extensions: 5925685 Number of successful extensions: 140075 Number of sequences better than 10.0: 241 Number of HSP's better than 10.0 without gapping: 240 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 139496 Number of HSP's gapped (non-prelim): 573 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
