ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35a22 |
|---|---|
| Clone Library Name | barley_pub |
>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box| domain protein 14) Length = 632 Score = 196 bits (498), Expect = 6e-50 Identities = 102/187 (54%), Positives = 141/187 (75%) Frame = -1 Query: 731 GSMXARENAAAAIFSLSLIDDNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCI 552 GSM ARENAAA +FSLS+ID+NK+ IG+ GAI+AL+ LL+ G+ RG+KDAATA+FNLCI Sbjct: 440 GSMEARENAAATLFSLSVIDENKVAIGAA-GAIQALISLLEEGTRRGKKDAATAIFNLCI 498 Query: 551 YQANKVRAVRAGILSPLVQMLQDSSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLI 372 YQ NK RAV+ GI+ PL ++L+D+ G DEAL IL++L ++ E KTAIA+A +IP L+ Sbjct: 499 YQGNKSRAVKGGIVDPLTRLLKDAGG-GMVDEALAILAILSTNQEGKTAIAEAESIPVLV 557 Query: 371 DLLRSSQARNKENAAAILLALCKKDAQNLACIGRLGAQIPLTELSKTGSDRAKRKATSLL 192 +++R+ RN+ENAAAIL LC + + L +GA + L EL++ G+DRAKRKA SLL Sbjct: 558 EIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLL 617 Query: 191 EHLSKLQ 171 E + + + Sbjct: 618 ELIQQTE 624 Score = 75.1 bits (183), Expect = 2e-13 Identities = 58/167 (34%), Positives = 82/167 (49%) Frame = -1 Query: 671 DNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQM 492 DN++ I GAI LVELL S R ++ + TAL NL I + NK V AG ++ +V++ Sbjct: 378 DNRVCIAEA-GAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEV 436 Query: 491 LQDSSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLA 312 L++ S + A T+ S+ V E K AI A I LI LL R K++AA + Sbjct: 437 LKNGSMEARENAAATLFSLSVI-DENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFN 495 Query: 311 LCKKDAQNLACIGRLGAQIPLTELSKTGSDRAKRKATSLLEHLSKLQ 171 LC + + G PLT L K +A ++L LS Q Sbjct: 496 LCIYQGNKSRAV-KGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQ 541
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related| protein SPL11) Length = 694 Score = 177 bits (448), Expect = 4e-44 Identities = 100/190 (52%), Positives = 128/190 (67%), Gaps = 2/190 (1%) Frame = -1 Query: 731 GSMXARENAAAAIFSLSLIDDNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCI 552 GSM ARENAAA +FSLS+ID+ K+ IG GAI ALV LL GS RG+KDAA ALFNLCI Sbjct: 462 GSMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLCI 520 Query: 551 YQANKVRAVRAGILSPLVQMLQDSSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLI 372 YQ NK RA+RAG++ PL+ L + + DEA+ ILS+L SH E K AI A +P L+ Sbjct: 521 YQGNKGRAIRAGLV-PLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLV 579 Query: 371 DLLRSSQARNKENAAAILLALCKKDAQ--NLACIGRLGAQIPLTELSKTGSDRAKRKATS 198 +++ S RN+ENAAA++L LC + +LA G +PL EL+ G+DR KRKA Sbjct: 580 EMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQ 639 Query: 197 LLEHLSKLQV 168 LLE +S+ V Sbjct: 640 LLERMSRFLV 649 Score = 67.8 bits (164), Expect = 3e-11 Identities = 46/137 (33%), Positives = 71/137 (51%) Frame = -1 Query: 716 RENAAAAIFSLSLIDDNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANK 537 + +AAA + L+ + N + + GAI L+ LL S R ++ A TAL NL I++ NK Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNK 443 Query: 536 VRAVRAGILSPLVQMLQDSSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRS 357 + +G + +V +L++ S + A T+ S+ V E K I IP L+ LL Sbjct: 444 ASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVI-DEYKVTIGGMGAIPALVVLLGE 502 Query: 356 SQARNKENAAAILLALC 306 R K++AAA L LC Sbjct: 503 GSQRGKKDAAAALFNLC 519 Score = 59.3 bits (142), Expect = 1e-08 Identities = 46/151 (30%), Positives = 71/151 (47%) Frame = -1 Query: 635 IEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQDSSSTGATDE 456 I+AL+ L S + ++ AA L L AN + PL+ L SS + Sbjct: 369 IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEH 428 Query: 455 ALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQNLACI 276 A+T L L H + K +I + +P ++ +L++ +ENAAA L +L D + I Sbjct: 429 AVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVT-I 487 Query: 275 GRLGAQIPLTELSKTGSDRAKRKATSLLEHL 183 G +GA L L GS R K+ A + L +L Sbjct: 488 GGMGAIPALVVLLGEGSQRGKKDAAAALFNL 518 Score = 33.1 bits (74), Expect = 0.91 Identities = 23/69 (33%), Positives = 32/69 (46%) Frame = -1 Query: 386 IPFLIDLLRSSQARNKENAAAILLALCKKDAQNLACIGRLGAQIPLTELSKTGSDRAKRK 207 I L+ L S + +AAA L L K++A N CI GA L L + R + Sbjct: 369 IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEH 428 Query: 206 ATSLLEHLS 180 A + L +LS Sbjct: 429 AVTALLNLS 437
>VAC8_YEAST (P39968) Vacuolar protein 8| Length = 577 Score = 43.1 bits (100), Expect = 9e-04 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%) Frame = -1 Query: 716 RENAAAAIFSLSLIDDNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQAN- 540 + NA A+ +++ ++N+ + + GA+ LV LL S + TAL N+ + +AN Sbjct: 183 QRNATGALLNMTHSEENRKELVNA-GAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANR 241 Query: 539 -KVRAVRAGILSPLVQMLQDSSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLL 363 K+ ++S LV L DS S+ +A L L S + I +A +P L+ L+ Sbjct: 242 KKLAQTEPRLVSKLVS-LMDSPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLI 300 Query: 362 RS 357 +S Sbjct: 301 QS 302 Score = 41.2 bits (95), Expect = 0.003 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 1/139 (0%) Frame = -1 Query: 635 IEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLV-QMLQDSSSTGATD 459 +E ++ LL+S + + A AL NL + NK+ V G L PL+ QM+ D+ Sbjct: 86 LEPILILLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLINQMMGDNVEVQC-- 143 Query: 458 EALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQNLAC 279 A+ ++ L + + K IA + + L L +S R + NA LL + + Sbjct: 144 NAVGCITNLATRDDNKHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKEL 203 Query: 278 IGRLGAQIPLTELSKTGSD 222 + + ++ LS T D Sbjct: 204 VNAGAVPVLVSLLSSTDPD 222 Score = 37.4 bits (85), Expect = 0.048 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = -1 Query: 698 AIFSLSLIDDNKIMIGST-PGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVR 522 A+ ++++ + N+ + T P + LV L+ S SSR + A AL NL + ++ VR Sbjct: 230 ALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLEIVR 289 Query: 521 AGILSPLVQMLQDSS 477 AG L LV+++Q S Sbjct: 290 AGGLPHLVKLIQSDS 304
>GDS1_HUMAN (P52306) Rap1 GTPase-GDP dissociation stimulator 1 (SMG P21| stimulatory GDP/GTP exchange protein) (SMG GDS protein) (Exchange factor smgGDS) Length = 607 Score = 35.8 bits (81), Expect = 0.14 Identities = 25/95 (26%), Positives = 43/95 (45%) Frame = -1 Query: 641 GAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQDSSSTGAT 462 G ++ LL SS K A + + + ++ V AG++SPLVQ+L Sbjct: 49 GILQLFASLLTPQSSCKAK-VANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLL 107 Query: 461 DEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRS 357 + ++ HE ++A+ +A +ID LRS Sbjct: 108 QTGRALGNICYDSHEGRSAVDQAGGAQIVIDHLRS 142
>GDS1A_XENLA (O93614) Rap1 GTPase-GDP dissociation stimulator 1-A (RalB-binding| protein-A) (Rap1gds1-A protein) (smgGDS-A) (XsmgGDS-A) Length = 607 Score = 35.8 bits (81), Expect = 0.14 Identities = 23/112 (20%), Positives = 47/112 (41%) Frame = -1 Query: 641 GAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQDSSSTGAT 462 G ++ +L S SS K A + + + ++ V AG++ PLVQ+L Sbjct: 49 GILQLFASILNSQSSCASK-VAHIVAEIAKNELMRIPCVEAGLIPPLVQLLHSKDQEVLL 107 Query: 461 DEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALC 306 + ++ +HE + A+ + ++D LRS ++ ++ C Sbjct: 108 QTGRALGNICYDNHEGRRAVDQEGGAQIVVDHLRSMCTLTDPSSEKLMTVFC 159
>IMA_LYCES (O22478) Importin alpha subunit (Karyopherin alpha subunit) (KAP| alpha) Length = 527 Score = 35.8 bits (81), Expect = 0.14 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 4/148 (2%) Frame = -1 Query: 674 DDNKIMIGSTPGAIEALVELLKSGSSRG-RKDAATALFNLCIYQANKVRAV-RAGILSPL 501 DD + + A+ LV LL + +K+A + N+ N+++ V AGI++PL Sbjct: 316 DDIQTQVMIDHHALPCLVNLLTQNYKKSIKKEACWTISNITAGNRNQIQIVIEAGIIAPL 375 Query: 500 VQMLQDSSSTGATDEALTILSVLV--SHHECKTAIAKAHTIPFLIDLLRSSQARNKENAA 327 V +LQ++ + A I + +H + K +++ P L DLL R Sbjct: 376 VYLLQNAEFEIKKEAAWAISNATSGGNHDQIKFLVSQGCIKP-LCDLLVCPDPR------ 428 Query: 326 AILLALCKKDAQNLACIGRLGAQIPLTE 243 ++ +C + +N+ IG + TE Sbjct: 429 --IVTVCLEGLENILKIGEADKDLGNTE 454
>IMA2_CAEEL (P91276) Importin alpha-2 subunit (Karyopherin alpha-2 subunit)| Length = 531 Score = 35.0 bits (79), Expect = 0.24 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Frame = -1 Query: 641 GAIEALVELLKSGSSRGRKDAATALFNLCIYQANK-VRAVRAGILSPLVQMLQDSSSTGA 465 G ++ALV+ L + R + +AA AL N+ + + AV AG+ PL+ + S+ + Sbjct: 132 GLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQIS 191 Query: 464 TDEALTILSVLVSHHECKTAIAKAHTIPFLIDLL 363 + ++ + + + K H + L+ L+ Sbjct: 192 EQALWAVANIAGDSSQLRDYVIKCHGVEALMHLM 225
>GDS1_BOVIN (Q04173) Rap1 GTPase-GDP dissociation stimulator 1 (SMG P21| stimulatory GDP/GTP exchange protein) (SMG GDS protein) (Exchange factor smgGDS) Length = 558 Score = 34.3 bits (77), Expect = 0.41 Identities = 34/156 (21%), Positives = 59/156 (37%) Frame = -1 Query: 641 GAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQDSSSTGAT 462 G ++ LL SS K A + + + ++ V AG++SPLVQ+L Sbjct: 49 GILQVFASLLIPQSSCTAK-VANVIAEIAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLL 107 Query: 461 DEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQNLA 282 + ++ H + + IP L+ LL C+K A Sbjct: 108 QTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIH---------------CQKAALTEM 152 Query: 281 CIGRLGAQIPLTELSKTGSDRAKRKATSLLEHLSKL 174 C+ G L++ S + + +T++ E L KL Sbjct: 153 CLVAFG------NLAELESSKEQFASTNIAEELVKL 182
>PLAK_XENLA (P30998) Junction plakoglobin (Desmoplakin III)| Length = 738 Score = 33.5 bits (75), Expect = 0.70 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 21/174 (12%) Frame = -1 Query: 635 IEALVELLKSGSSRGRKDAATALF-NLCIYQANKVRAVRAGILSPLVQML----QDSS-- 477 I A+V+LL A L NL + AN AG++ LVQ+L QD+ Sbjct: 478 IPAIVKLLNPPYQWPLVKATIGLIRNLALCPANHAPLYDAGVIPRLVQLLVKSHQDAQRH 537 Query: 476 STGATDEALT--------------ILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNK 339 + T + T L +L + I K +TIP + LL S N Sbjct: 538 AASGTQQPYTDGVKMEEIVEGCTGALHILARDPVNRMDIYKLNTIPLFVQLL-YSPVENI 596 Query: 338 ENAAAILLALCKKDAQNLACIGRLGAQIPLTELSKTGSDRAKRKATSLLEHLSK 177 + ++ +L +D + I GA PL EL + ++ A ++L +S+ Sbjct: 597 QRVSSGVLCELAQDKEAADTIDAEGASAPLMELLHSRNEGIATYAAAVLFRISE 650
>IMA2_ARATH (O04294) Importin alpha-2 subunit (Karyopherin alpha-2 subunit)| (KAP alpha) Length = 531 Score = 33.5 bits (75), Expect = 0.70 Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Frame = -1 Query: 647 TPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAV-RAGILSPLVQMLQDSSST 471 T A+ L L++S DA AL L +K++AV AG++ L+Q+L SS + Sbjct: 243 TQPALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPS 302 Query: 470 GATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAA 327 TI +++ + +P L++LL+++ ++ + A Sbjct: 303 VLIPALRTIGNIVTGDDLQTQMVLDQQALPCLLNLLKNNYKKSIKKEA 350
>YAMB_SCHPO (Q10064) Hypothetical protein C1F5.11c in chromosome I| Length = 3655 Score = 33.5 bits (75), Expect = 0.70 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Frame = -1 Query: 725 MXARENAAAAIFSLSLIDDNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQ 546 M R A F+L + N++ G A +A ++ G+ + L++ ++Q Sbjct: 2880 MYFRNRQKAEFFTLKGMFQNRL--GEKDEANQAFATAVQIDIGSGKAWSEWGLYHDELFQ 2937 Query: 545 ANKVRAVRA-GILSPLVQ---MLQDSSSTGATDEALTILSVLVSHHEC-------KTAIA 399 AN A +S +Q +L S+S L +LSV SH K+ I Sbjct: 2938 ANPQEIHHACNAVSCFLQASSLLSSSNSKPLLTRVLWLLSVDDSHGSVSEVVSSFKSEIP 2997 Query: 398 KAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQNL 285 + IPF+ LL + R +A AIL+ + K Q+L Sbjct: 2998 TWNWIPFIPQLLSALSHRESIHARAILIQIAKTYPQSL 3035
>IMA1A_ORYSA (Q71VM4) Importin alpha-1a subunit| Length = 526 Score = 32.3 bits (72), Expect = 1.5 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 4/126 (3%) Frame = -1 Query: 638 AIEALVELLKSGSSRG-RKDAATALFNLCIYQANKVRAV-RAGILSPLVQMLQDSSSTGA 465 A+ L+ LL + +K+A + N+ ++++AV AGI+ PLV +LQ + Sbjct: 327 ALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIK 386 Query: 464 TDEALTILSVLV--SHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQ 291 + A I + SH + K +++ P L DLL R ++ +C + + Sbjct: 387 KEAAWAISNATSGGSHDQIKYLVSEGCIKP-LCDLLICPDIR--------IVTVCLEGLE 437 Query: 290 NLACIG 273 N+ +G Sbjct: 438 NILKVG 443
>IMA1_SCHPO (O14063) Importin alpha subunit (Karyopherin alpha subunit)| (Serine-rich RNA polymerase I suppressor protein) (Cell untimely torn protein 15) Length = 542 Score = 32.3 bits (72), Expect = 1.5 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -1 Query: 674 DDNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVR-AVRAGILSPLV 498 DD + + GA+ AL+ LL S RK+A + N+ +++++ + A I+ PL+ Sbjct: 321 DDVQTQVIINCGALSALLSLLSSPRDGVRKEACWTISNITAGNSSQIQYVIEANIIPPLI 380 Query: 497 QML 489 +L Sbjct: 381 HLL 383
>GDS1B_XENLA (Q5PPZ9) Rap1 GTPase-GDP dissociation stimulator 1-B (RalB-binding| protein-B) (Rap1gds1-B protein) (smgGDS-B) (XsmgGDS-B) Length = 607 Score = 31.6 bits (70), Expect = 2.6 Identities = 21/112 (18%), Positives = 45/112 (40%) Frame = -1 Query: 641 GAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQDSSSTGAT 462 G ++ +L S SS K A + + + ++ V A ++ PLVQ+L Sbjct: 49 GILQLFASILNSQSSCASK-VAHIVAEIAKNELMRIPCVEADLIPPLVQLLHSKDQEVLL 107 Query: 461 DEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALC 306 + ++ +HE + + + ++D LRS ++ ++ C Sbjct: 108 QTGRALGNICYDNHEGRRTVDQEGGAQIVVDHLRSRCTLTDPSSEKLMTVFC 159
>HEMH2_BACCZ (Q63EK7) Ferrochelatase 2 (EC 4.99.1.1) (Protoheme ferro-lyase 2)| (Heme synthetase 2) Length = 319 Score = 30.8 bits (68), Expect = 4.5 Identities = 30/117 (25%), Positives = 56/117 (47%) Frame = -1 Query: 662 IMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQD 483 +M TP ++E VE + GRK + AL +L + +A+ G +SPL ++ ++ Sbjct: 10 VMAYGTPESLED-VEAYYTHIRHGRKPSEEALQDLI----GRYKAI--GGISPLAKITKE 62 Query: 482 SSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLA 312 + TD ++ + + +E + HT PF+ D + + E A +I+LA Sbjct: 63 QAHK-LTDS----MNNMFTEYEFNCYLGLKHTAPFIEDAVEEMKRDGIEQAISIVLA 114
>CHEB2_METMA (Q8PX96) Chemotaxis response regulator protein-glutamate| methylesterase of group 2 operon (EC 3.1.1.61) Length = 367 Score = 30.8 bits (68), Expect = 4.5 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 368 LLRSSQARNKENAAAILLALCKKDAQNLACIGRLGAQIPLTELSKTGSDRAKRKATSLL 192 +L S E A + A+ K D NL CI L QIP K S R K ++L Sbjct: 121 ILSQSMHEMAEEICAKVRAVSKADLNNLGCIRDLEHQIPENHRKKKNSLREKTSVRNVL 179
>YN28_YEAST (P53829) Hypothetical 41.2 kDa protein in PLC1-SEC21 intergenic| region Length = 373 Score = 30.8 bits (68), Expect = 4.5 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Frame = -1 Query: 497 QMLQDSSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARN-----KEN 333 QML ++ S + AL +L + SH E K +AH FL L ++ + + Sbjct: 164 QMLSNNLSNRVCN-ALVLLQCVASHPETKHLFLQAHIPLFLFPFLNTTSRQRTFEYLRLT 222 Query: 332 AAAILLALCKKDAQNLACIGRLGAQIPL-TELSKTGSDRAKRKATSLLEHL 183 + ++ AL K D+Q++ +PL + ++ S+ +K A +L+ + Sbjct: 223 SLGVIGALVKNDSQDVITFLLRTDIVPLCLRIMESSSELSKTVAIFILQKI 273
>IMB3_SCHPO (O74476) Importin beta-3 subunit| Length = 1095 Score = 30.8 bits (68), Expect = 4.5 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 7/116 (6%) Frame = -1 Query: 635 IEALVELLKSGSSRGRKDAATALFNLCIYQANKV-RAVRAGILSPLVQMLQDSSSTGATD 459 +EALV +L+S SR + AA A+ N NKV IL L+ +LQ S + Sbjct: 456 LEALVPVLESPESRVQAHAAAAMVNFSEEADNKVLEPYLDDILQRLLTLLQ-SPKRYVQE 514 Query: 458 EALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQA------RNKENAAAILLAL 309 +A+T ++ + K +P L ++L+ + R K A L+AL Sbjct: 515 QAVTTIATVADAAAKKFEKYFDAIMPLLFNVLQQADGKEFRTLRGKTMECATLIAL 570 Score = 30.4 bits (67), Expect = 5.9 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 6/100 (6%) Frame = -1 Query: 710 NAAAAIFSLSLIDDNKIMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVR 531 +AAAA+ + S DNK++ ++ L+ LL+S ++ A T + + A K Sbjct: 473 HAAAAMVNFSEEADNKVLEPYLDDILQRLLTLLQSPKRYVQEQAVTTIATVADAAAKKFE 532 Query: 530 AVRAGILSPLVQMLQDSSS------TGATDEALTILSVLV 429 I+ L +LQ + G T E T++++ V Sbjct: 533 KYFDAIMPLLFNVLQQADGKEFRTLRGKTMECATLIALAV 572
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.8 bits (68), Expect = 4.5 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -3 Query: 567 VQSMHIPGKQGPRGPGRNIITTGSDAARFIQHWSHRRG--AHNLVGPRESPRVQNSHSQG 394 +Q H PG GP+GP R ++ T S Q +G H LV ++ + Q QG Sbjct: 3535 LQQQH-PGALGPQGPHRQVLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQG 3593 Query: 393 S 391 S Sbjct: 3594 S 3594
>HEMH2_BACHK (Q6HM28) Ferrochelatase 2 (EC 4.99.1.1) (Protoheme ferro-lyase 2)| (Heme synthetase 2) Length = 319 Score = 30.4 bits (67), Expect = 5.9 Identities = 29/117 (24%), Positives = 56/117 (47%) Frame = -1 Query: 662 IMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQD 483 +M TP +++ VE + GRK + AL +L + +A+ G +SPL ++ ++ Sbjct: 10 VMAYGTPDSLDE-VEAYYTHIRHGRKPSEEALQDLI----GRYKAI--GGISPLAKITKE 62 Query: 482 SSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLA 312 + TD ++ + + +E + HT PF+ D + + E A +I+LA Sbjct: 63 QAHK-LTDS----MNNMFTEYEFNCYLGLKHTAPFIEDAVEEMKRDGIEQAISIVLA 114
>HEMH2_BACAN (Q81TU9) Ferrochelatase 2 (EC 4.99.1.1) (Protoheme ferro-lyase 2)| (Heme synthetase 2) Length = 319 Score = 30.4 bits (67), Expect = 5.9 Identities = 29/117 (24%), Positives = 56/117 (47%) Frame = -1 Query: 662 IMIGSTPGAIEALVELLKSGSSRGRKDAATALFNLCIYQANKVRAVRAGILSPLVQMLQD 483 +M TP +++ VE + GRK + AL +L + +A+ G +SPL ++ ++ Sbjct: 10 VMAYGTPDSLDE-VEAYYTHIRHGRKPSEEALQDLI----GRYKAI--GGISPLAKITKE 62 Query: 482 SSSTGATDEALTILSVLVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLA 312 + TD ++ + + +E + HT PF+ D + + E A +I+LA Sbjct: 63 QAHK-LTDS----MNNMFTEYEFNCYLGLKHTAPFIEDAVEEMKRDGIEQAISIVLA 114
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.4 bits (67), Expect = 5.9 Identities = 34/128 (26%), Positives = 43/128 (33%) Frame = -3 Query: 552 IPGKQGPRGPGRNIITTGSDAARFIQHWSHRRGAHNLVGPRESPRVQNSHSQGSHHPLLD 373 +PGK GPRGP I G + G + GPR P +G H P Sbjct: 753 VPGKDGPRGPAGPIGPPGPAGQPGDKGEGGSPGLPGIAGPRGGP-----GERGEHGP--- 804 Query: 372 RFVKIKPGP*QGECRGYFTCTLQEGRPESRLHREAGCSNTINGAVQDRLGQSQAQGDLSP 193 PGP G+ Q G P ++ R A G G + + G P Sbjct: 805 ------PGP-----AGFPGAPGQNGEPGAKGERGAP-GEKGEGGPPGPAGPTGSSGPAGP 852 Query: 192 GASQ*VAG 169 Q V G Sbjct: 853 PGPQGVKG 860
>TIG_MYCTU (O53189) Trigger factor (TF)| Length = 466 Score = 30.0 bits (66), Expect = 7.7 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 291 ESRLHREAGCSNTINGAVQDRLGQSQAQGDLSP 193 E+R+ REA +N A+ R GQ+ A+ D+ P Sbjct: 55 EARIGREAMLDQIVNDALPSRYGQAVAESDVQP 87
>TIG_MYCBO (Q7TYJ1) Trigger factor (TF)| Length = 466 Score = 30.0 bits (66), Expect = 7.7 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 291 ESRLHREAGCSNTINGAVQDRLGQSQAQGDLSP 193 E+R+ REA +N A+ R GQ+ A+ D+ P Sbjct: 55 EARIGREAMLDQIVNDALPSRYGQAVAESDVQP 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,885,540 Number of Sequences: 219361 Number of extensions: 2386269 Number of successful extensions: 6504 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 5879 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6479 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7592921998 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
