ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34l14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
2dbj|AK107485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
4emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.15
5emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 44 0.59
6gb|BT016251.1| Zea mays clone Contig84 mRNA sequence 42 2.3
7gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 2.3
8gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 2.3
9gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.3
10gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 2.3
11gb|BC114062.1| Bos taurus cDNA clone MGC:137539 IMAGE:8161659, c... 42 2.3
12gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Canc... 42 2.3
13gb|AE004942.1| Pseudomonas aeruginosa PAO1, section 503 of 529 o... 42 2.3
14ref|NM_174757.2| Bos taurus aspartate beta-hydroxylase (ASPH), mRNA 42 2.3
15gb|U07832.1|PAU07832 Pseudomonas aeruginosa helicase I (helA) ge... 42 2.3
16emb|AL954171.10| Zebrafish DNA sequence from clone CH211-284B7 i... 42 2.3
17gb|AY104505.1| Zea mays PCO140706 mRNA sequence 42 2.3
18gb|M91213.1|BOVASBHY Bos taurus aspartyl (asparaginyl) beta hydr... 42 2.3
19ref|XM_464632.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
20ref|XM_464631.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
21gb|AC123646.8| Mus musculus chromosome 19, clone RP23-104P24, co... 40 9.2
22gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 9.2
23gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 9.2
24emb|CR450748.10| Zebrafish DNA sequence from clone CH211-157P5, ... 40 9.2
25emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 9.2
26emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in... 40 9.2
27ref|XM_385426.1| Gibberella zeae PH-1 chromosome 3 conserved hyp... 40 9.2
28gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 9.2
29gb|AC093120.4| Mus musculus Strain C57BL6/J Chromosome 6 BAC, RP... 40 9.2
30gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP... 40 9.2
31gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosom... 40 9.2
32gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.2
33emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 40 9.2
34gb|AC109806.12| Mus musculus chromosome 1, clone RP23-310C14, co... 40 9.2
35dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 9.2
36gb|AE011752.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 9.2
37gb|AE012211.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 9.2
38gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 9.2
39gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 9.2
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
41dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 9.2
42dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
43dbj|AK106388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
44emb|BX649419.6| Zebrafish DNA sequence from clone CH211-106J5 in... 40 9.2
45gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 9.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 431      cacctggtaccacgccccgccgtcgtacccgaggtggaactcc 473
                ||||||||||||||| |||||||||   |||| ||||||||||
Sbjct: 23454032 cacctggtaccacgcgccgccgtcggggccgacgtggaactcc 23453990
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>dbj|AK107485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C08, full
           insert sequence
          Length = 800

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 431 cacctggtaccacgccccgccgtcgtacccgaggtggaactcc 473
           ||||||||||||||| |||||||||   |||| ||||||||||
Sbjct: 348 cacctggtaccacgcgccgccgtcggggccgacgtggaactcc 306
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 431      cacctggtaccacgccccgccgtcgtacccgaggtggaactcc 473
                ||||||||||||||| |||||||||   |||| ||||||||||
Sbjct: 23382223 cacctggtaccacgcgccgccgtcggggccgacgtggaactcc 23382181
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 431   cacctggtaccacgccccgccgtcgtacccgaggtggaactcc 473
             ||||||||||||||| |||||||||   |||| ||||||||||
Sbjct: 48127 cacctggtaccacgcgccgccgtcggggccgacgtggaactcc 48169
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>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 524    gaacgaaacgtgggtgccctggcggagcag 553
              |||| |||||||||||||||||| ||||||
Sbjct: 120629 gaaccaaacgtgggtgccctggcagagcag 120600
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>gb|BT016251.1| Zea mays clone Contig84 mRNA sequence
          Length = 943

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 620 gcacaggttctgcaccgtcac 640
           |||||||||||||||||||||
Sbjct: 207 gcacaggttctgcaccgtcac 187
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 586    ccagcggctcgatgccgaggg 606
              |||||||||||||||||||||
Sbjct: 189122 ccagcggctcgatgccgaggg 189142
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 274     tcttgatctcgtcgacgccgt 294
               |||||||||||||||||||||
Sbjct: 6187969 tcttgatctcgtcgacgccgt 6187949



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 544     ggcggagcaggtggccgggg 563
               ||||||||||||||||||||
Sbjct: 4334329 ggcggagcaggtggccgggg 4334310
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>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete
            sequence
          Length = 190328

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 570  aggagcttgctgttggccagc 590
            |||||||||||||||||||||
Sbjct: 1806 aggagcttgctgttggccagc 1826
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 274     tcttgatctcgtcgacgccgt 294
               |||||||||||||||||||||
Sbjct: 6852751 tcttgatctcgtcgacgccgt 6852731
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>gb|BC114062.1| Bos taurus cDNA clone MGC:137539 IMAGE:8161659, complete cds
          Length = 1626

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 331 tgccgccgctggtgcagccgg 351
           |||||||||||||||||||||
Sbjct: 282 tgccgccgctggtgcagccgg 262
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>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226538

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 570    aggagcttgctgttggccagc 590
              |||||||||||||||||||||
Sbjct: 114199 aggagcttgctgttggccagc 114179
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>gb|AE004942.1| Pseudomonas aeruginosa PAO1, section 503 of 529 of the complete
            genome
          Length = 10977

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 274  tcttgatctcgtcgacgccgt 294
            |||||||||||||||||||||
Sbjct: 4822 tcttgatctcgtcgacgccgt 4802
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>ref|NM_174757.2| Bos taurus aspartate beta-hydroxylase (ASPH), mRNA
          Length = 2739

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 331 tgccgccgctggtgcagccgg 351
           |||||||||||||||||||||
Sbjct: 276 tgccgccgctggtgcagccgg 256
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>gb|U07832.1|PAU07832 Pseudomonas aeruginosa helicase I (helA) gene, partial cds
          Length = 2122

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 274  tcttgatctcgtcgacgccgt 294
            |||||||||||||||||||||
Sbjct: 1036 tcttgatctcgtcgacgccgt 1016
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>emb|AL954171.10| Zebrafish DNA sequence from clone CH211-284B7 in linkage group 2,
             complete sequence
          Length = 148854

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   ccagcagcaacctagctactc 221
             |||||||||||||||||||||
Sbjct: 18903 ccagcagcaacctagctactc 18883
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>gb|AY104505.1| Zea mays PCO140706 mRNA sequence
          Length = 933

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 620 gcacaggttctgcaccgtcac 640
           |||||||||||||||||||||
Sbjct: 205 gcacaggttctgcaccgtcac 185
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>gb|M91213.1|BOVASBHY Bos taurus aspartyl (asparaginyl) beta hydroxylase mRNA, complete
           cds
          Length = 2739

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 331 tgccgccgctggtgcagccgg 351
           |||||||||||||||||||||
Sbjct: 276 tgccgccgctggtgcagccgg 256
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>ref|XM_464632.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 273

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 331 tgccgccgctggtgcagccg 350
           ||||||||||||||||||||
Sbjct: 216 tgccgccgctggtgcagccg 197
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>ref|XM_464631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 273

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 331 tgccgccgctggtgcagccg 350
           ||||||||||||||||||||
Sbjct: 216 tgccgccgctggtgcagccg 197
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>gb|AC123646.8| Mus musculus chromosome 19, clone RP23-104P24, complete sequence
          Length = 189534

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    gccgtgcggggtgatggaga 399
              ||||||||||||||||||||
Sbjct: 143473 gccgtgcggggtgatggaga 143492
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 594     tcgatgccgagggagaggtc 613
               ||||||||||||||||||||
Sbjct: 1380766 tcgatgccgagggagaggtc 1380785
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 476     caccacggcgtcctgcacct 495
               ||||||||||||||||||||
Sbjct: 2997540 caccacggcgtcctgcacct 2997521
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>emb|CR450748.10| Zebrafish DNA sequence from clone CH211-157P5, complete sequence
          Length = 191667

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   gccggggctgtagaggagct 576
             ||||||||||||||||||||
Sbjct: 20875 gccggggctgtagaggagct 20856
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 337     cgctggtgcagccggcggtg 356
               ||||||||||||||||||||
Sbjct: 1420650 cgctggtgcagccggcggtg 1420669
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>emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in linkage group 8,
             complete sequence
          Length = 127307

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    aactactaattgaacagcaaatcc 113
             |||||||| |||||||||||||||
Sbjct: 82181 aactactacttgaacagcaaatcc 82204
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>ref|XM_385426.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein
            (FG05250.1) partial mRNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  cgatcttgatctcgtcgacg 290
            ||||||||||||||||||||
Sbjct: 1564 cgatcttgatctcgtcgacg 1545
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     gtgctcgaagcacttgccgc 336
               ||||||||||||||||||||
Sbjct: 4074138 gtgctcgaagcacttgccgc 4074157
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>gb|AC093120.4| Mus musculus Strain C57BL6/J Chromosome 6 BAC, RP23-125A24, Complete
            Sequence, complete sequence
          Length = 187794

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  ctgcagacttattaaacaaa 195
            ||||||||||||||||||||
Sbjct: 2484 ctgcagacttattaaacaaa 2503
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>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete
              Sequence, complete sequence
          Length = 192227

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    ctgcagacttattaaacaaa 195
              ||||||||||||||||||||
Sbjct: 167164 ctgcagacttattaaacaaa 167183
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>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence
          Length = 191467

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   ctgcagacttattaaacaaa 195
             ||||||||||||||||||||
Sbjct: 85138 ctgcagacttattaaacaaa 85157
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 583     tggccagcggctcgatgccg 602
               ||||||||||||||||||||
Sbjct: 2936805 tggccagcggctcgatgccg 2936786
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 541    cctggcggagcaggtggccg 560
              ||||||||||||||||||||
Sbjct: 274025 cctggcggagcaggtggccg 274044
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>gb|AC109806.12| Mus musculus chromosome 1, clone RP23-310C14, complete sequence
          Length = 198227

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    aactactaattgaacagcaa 109
             ||||||||||||||||||||
Sbjct: 24853 aactactaattgaacagcaa 24834
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgctggtgcagccggcggtg 356
               ||||||||||||||||||||
Sbjct: 3795931 cgctggtgcagccggcggtg 3795912
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>gb|AE011752.1| Xanthomonas axonopodis pv. citri str. 306,  section 130 of 469 of the
             complete genome
          Length = 12030

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   cgctggtgcagccggcggtg 356
             ||||||||||||||||||||
Sbjct: 11561 cgctggtgcagccggcggtg 11580
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>gb|AE012211.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 119 of
             460 of the complete genome
          Length = 14128

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   cgctggtgcagccggcggtg 356
             ||||||||||||||||||||
Sbjct: 13490 cgctggtgcagccggcggtg 13509
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgctggtgcagccggcggtg 356
               ||||||||||||||||||||
Sbjct: 3727289 cgctggtgcagccggcggtg 3727270
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 329     cttgccgccgctggtgcagccggc 352
               ||||||||||||||||||| ||||
Sbjct: 2519606 cttgccgccgctggtgcaggcggc 2519583
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 331     tgccgccgctggtgcagccg 350
               ||||||||||||||||||||
Sbjct: 6414404 tgccgccgctggtgcagccg 6414385



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 331     tgccgccgctggtgcagccg 350
               ||||||||||||||||||||
Sbjct: 6406897 tgccgccgctggtgcagccg 6406878
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 412    tgcgcgactggtcggtgctcacct 435
              ||||||||||||||||| ||||||
Sbjct: 412681 tgcgcgactggtcggtggtcacct 412658
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>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_D05
          Length = 128178

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   tgccgccgctggtgcagccg 350
             ||||||||||||||||||||
Sbjct: 56397 tgccgccgctggtgcagccg 56378



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   tgccgccgctggtgcagccg 350
             ||||||||||||||||||||
Sbjct: 48890 tgccgccgctggtgcagccg 48871
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>dbj|AK106388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E09, full
           insert sequence
          Length = 2044

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 tgccgccgctggtgcagccg 350
           ||||||||||||||||||||
Sbjct: 89  tgccgccgctggtgcagccg 108
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>emb|BX649419.6| Zebrafish DNA sequence from clone CH211-106J5 in linkage group 22,
              complete sequence
          Length = 172908

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 557    gccggggctgtagaggagct 576
              ||||||||||||||||||||
Sbjct: 102854 gccggggctgtagaggagct 102835
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgctggtgcagccggcggtg 356
               ||||||||||||||||||||
Sbjct: 3796537 cgctggtgcagccggcggtg 3796518


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,177,609
Number of Sequences: 3902068
Number of extensions: 4177609
Number of successful extensions: 90842
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89762
Number of HSP's gapped (non-prelim): 1080
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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