ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35a10 |
|---|---|
| Clone Library Name | barley_pub |
>RL18A_ORYSA (Q943F3) 60S ribosomal protein L18a| Length = 178 Score = 337 bits (865), Expect = 1e-92 Identities = 162/178 (91%), Positives = 167/178 (93%) Frame = -3 Query: 628 MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 449 M A RFHQYQVVGR LPTP DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKK+NGQ+ Sbjct: 1 MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60 Query: 448 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 269 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120 Query: 268 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLFM 95 PCIQIIKTATV FKLCKRDNTKQFH S IKFPLV +KVRPPTRKLKTT+KA+RPNLFM Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178
>RL18A_ARATH (P51418) 60S ribosomal protein L18a-1| Length = 178 Score = 330 bits (847), Expect = 2e-90 Identities = 159/178 (89%), Positives = 167/178 (93%) Frame = -3 Query: 628 MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 449 M A RFHQYQVVGRALPT D QPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKK+NGQM Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60 Query: 448 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 269 LAINEI+EKNPTTIKN+GIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120 Query: 268 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLFM 95 PCIQIIKTATV KLCKR++TKQFHNSKIKFPLV +KVRPP+RKLKTTYKA +PNLFM Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
>RL18B_ARATH (Q9LUD4) 60S ribosomal protein L18a-2| Length = 178 Score = 327 bits (837), Expect = 2e-89 Identities = 157/178 (88%), Positives = 164/178 (92%) Frame = -3 Query: 628 MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 449 M RFHQYQVVGRALPT DE PKIYRMKLW NEV AKSKFWYF+RKLKKVKK+NGQM Sbjct: 1 MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60 Query: 448 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 269 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVR Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120 Query: 268 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLFM 95 PCIQIIKTATV KLCKR+ TKQFHNSKIKFPLV +KVRPP+RKLKTTYKA++PNLFM Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
>RL18A_CASSA (Q9ATF5) 60S ribosomal protein L18a| Length = 178 Score = 324 bits (831), Expect = 1e-88 Identities = 154/178 (86%), Positives = 164/178 (92%) Frame = -3 Query: 628 MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 449 MV RFHQYQVVGR LP+ DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKK+NGQM Sbjct: 1 MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60 Query: 448 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 269 LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMY EMASRHRVR Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120 Query: 268 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLFM 95 PCIQIIKTAT+ KLCKR+++KQFHNSKIKFPLV +K+RPP+RKLKT YKA+RPNLFM Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178
>RL18A_HUMAN (Q02543) 60S ribosomal protein L18a| Length = 176 Score = 184 bits (466), Expect = 3e-46 Identities = 86/170 (50%), Positives = 119/170 (70%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+VVGR LPTP P +YRM+++A N V AKS+FWYF+ +LKK+KK++G+++ ++F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 EK+P +KN+GIWLRY SR+G HNMY+EYRD T G V Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 + C+R KQFH+SKIKFPL + +R R+ K + RPN F Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>RL18A_RAT (P62718) 60S ribosomal protein L18a| Length = 176 Score = 183 bits (464), Expect = 4e-46 Identities = 86/170 (50%), Positives = 119/170 (70%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+VVGR LPTP P +YRM+++A N V AKS+FWYF+ +LKK+KK++G+++ ++F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 EK+P +KN+GIWLRY SR+G HNMY+EYRD T G V Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 + C+R KQFH+SKIKFPL + +R R+ K + RPN F Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>RL18A_MOUSE (P62717) 60S ribosomal protein L18a| Length = 176 Score = 183 bits (464), Expect = 4e-46 Identities = 86/170 (50%), Positives = 119/170 (70%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+VVGR LPTP P +YRM+++A N V AKS+FWYF+ +LKK+KK++G+++ ++F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 EK+P +KN+GIWLRY SR+G HNMY+EYRD T G V Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 + C+R KQFH+SKIKFPL + +R R+ K + RPN F Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>RL18A_BRARE (Q7ZWJ4) 60S ribosomal protein L18a| Length = 176 Score = 179 bits (454), Expect = 6e-45 Identities = 84/170 (49%), Positives = 119/170 (70%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KKA+G+++ +F Sbjct: 9 EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVF 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 EK+P +KN+GIWLRY SR+G HNMY+EYRD T +G V Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 + C+R KQFH+SKIKFPL + +R R+ K + RPN F Sbjct: 129 VQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>RL18A_CAEEL (O44480) 60S ribosomal protein L18a| Length = 180 Score = 178 bits (452), Expect = 1e-44 Identities = 84/176 (47%), Positives = 121/176 (68%) Frame = -3 Query: 631 RMVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQ 452 + + ++Y VVGR +PT + I++M+++ATN V AKS+FWYF+ L++VKKANG+ Sbjct: 4 KALGETLNEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGE 63 Query: 451 MLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVR 272 +L+I ++FEKNP T+KNYG+WL+Y SRTG+HNMY+EYRDTT+ G V Q Y +M +RHR + Sbjct: 64 ILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQ 123 Query: 271 SPCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPN 104 + I I+K TV + KR K FH++KI+FPL R RK + + R N Sbjct: 124 ADRIHILKVQTVKAEDTKRAGIKMFHDAKIRFPLPH---RVTKRKNLSVFTTARQN 176
>RL18A_SPOFR (Q8WQI7) 60S ribosomal protein L18a| Length = 177 Score = 178 bits (451), Expect = 1e-44 Identities = 81/170 (47%), Positives = 118/170 (69%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+V+GR LP+ + +P +Y+M++++ +++ AKS+FWYFLR+LKK KK G++++I EI Sbjct: 9 EYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGEIVSIREIP 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 EK+P IKN+GIWLRY+SR+G HNMY+EYRD ++ G V Q Y +M +RHR R+ IQIIK Sbjct: 69 EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 + C+R KQFHNS I+FPL R K T+ RP+ + Sbjct: 129 VEVIKASACRRPQVKQFHNSTIRFPL---PKRVHHHKRLNTFAYKRPSTY 175
>RL18A_DROME (P41093) 60S ribosomal protein L18a| Length = 177 Score = 175 bits (444), Expect = 9e-44 Identities = 80/158 (50%), Positives = 114/158 (72%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+VVGR LP+ + Q +Y+M+++A + + AKS+FWYFLR+LKK KK G++++I +++ Sbjct: 9 EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVY 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 E +P IKN+GIWLRY SR+G HNMY+EYRD T+ G V Q Y +M +RHR R+ IQIIK Sbjct: 69 ETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKL 134 ++ +R + KQFH+SKIKFPLV + RKL Sbjct: 129 VDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166
>RL18A_ICTPU (Q90YU9) 60S ribosomal protein L18a| Length = 176 Score = 174 bits (440), Expect = 3e-43 Identities = 82/170 (48%), Positives = 116/170 (68%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KKANG+ + + Sbjct: 9 EYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 E++P +KN+GIWLRY SR+G HNMY+EYRD T +G V Q Y +M +RHR R+ IQI+K Sbjct: 69 EQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 + C+R KQFH+SKIKFPL + +R R+ K + RP F Sbjct: 129 VQVIAANKCRRAAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTRRPQTF 175
>RL20_YEAST (P47913) 60S ribosomal protein L20 (L18A)| Length = 174 Score = 168 bits (426), Expect = 1e-41 Identities = 84/177 (47%), Positives = 121/177 (68%), Gaps = 1/177 (0%) Frame = -3 Query: 625 VAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQML 446 +AH F +YQV+GR LPT +PK++RM+++A+NEV AKS++WYFL+KL KVKKA+G+++ Sbjct: 3 LAH-FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIV 61 Query: 445 AINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSP 266 +IN+I E +PT +KN+G+W+RY SR+G HNMYKE RD + VE +Y +MA+RHR R Sbjct: 62 SINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFR 121 Query: 265 CIQIIKTATVDFKL-CKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 I I+K A ++ KR KQF +KFPL + +K T+ RP+ F Sbjct: 122 SIHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-----VQKSTKTFSYKRPSTF 173
>RL18A_SALSA (O57561) 60S ribosomal protein L18a| Length = 176 Score = 166 bits (421), Expect = 4e-41 Identities = 79/170 (46%), Positives = 112/170 (65%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KKANG+ + + Sbjct: 9 EYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 EK P +KN+G+WLR SR+G HNMY+EYRD T + V Q Y +M +RHR R+ I I+K Sbjct: 69 EKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAVTQCYRDMGARHRARAHSIHIMK 128 Query: 247 TATVDFKLCKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 + C+R KQFH+SKIKFPL + +R R+ + RPN F Sbjct: 129 VQEIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHNPRFTTKRPNTF 175
>RL20_SCHPO (P05732) 60S ribosomal protein L20 (YL17)| Length = 175 Score = 164 bits (414), Expect = 3e-40 Identities = 83/171 (48%), Positives = 113/171 (66%), Gaps = 1/171 (0%) Frame = -3 Query: 607 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 428 +YQVVGR +PT + PK++RM+L+A NE AKS++WYFL+ + KVKKA G+++AINEI Sbjct: 4 EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEIS 63 Query: 427 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 248 E P K +GIW+RY SR+G HNMYKE+RDTT G VE MY +MA+RHR R I+I+K Sbjct: 64 EPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILK 123 Query: 247 TATVDFKL-CKRDNTKQFHNSKIKFPLVXQKVRPPTRKLKTTYKATRPNLF 98 V+ K +R+ KQ N +KFPL ++ K + RP+ F Sbjct: 124 VVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 174
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 33.9 bits (76), Expect = 0.42 Identities = 23/68 (33%), Positives = 25/68 (36%) Frame = -2 Query: 464 GQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQHVQGVPRHDSERRCGADVHGDGVX 285 G D RH RD E D + A P D HV+G PR RR G Sbjct: 69 GSGHDRRHDRDRNRERDRRDHDSPIEAAPSPDGRRFHVEGAPRQGGRRRWD---EGAPTP 125 Query: 284 APRAFPVH 261 A PVH Sbjct: 126 PTAAAPVH 133
>G6PI_MOUSE (P06745) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) (Neuroleukin) (NLK) Length = 557 Score = 33.5 bits (75), Expect = 0.55 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = -3 Query: 487 RKLKKVKKANGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQ 308 +KL + +AN L + E+FE +P N+ + L T + ++ +Y +N V Q Sbjct: 10 QKLLEWHRANSANLKLRELFEADPERFNNFSLNL----NTNHGHILVDYSKNLVNKEVMQ 65 Query: 307 MYTEMASRHRVRS 269 M E+A V + Sbjct: 66 MLVELAKSRGVEA 78
>INVO_SAGOE (P24712) Involucrin| Length = 493 Score = 32.3 bits (72), Expect = 1.2 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 3/129 (2%) Frame = -2 Query: 554 DLPHEALGHQRG-PRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQ-ELRHLAAL 381 +LP + G + Q + L LPE+ +EGQ Q E P+ + +L+HL Sbjct: 173 ELPEQQEGQLKNLEHQEKPLELPEQ----QEGQLKHLEQQEKPLELPEQQEGQLKHLEQQ 228 Query: 380 PEQDRLPQHVQGVPRHDSERRCGADVHGDGVXAPRAFPVHPDHQDCDGGLQAVQE-GQHE 204 Q LP+ +G P++ E+ G H + + H +H+ +G L+ ++ GQ + Sbjct: 229 EGQSELPEQQRGQPKY-LEQEEGQLKH---LEEQKGQLKHLEHE--EGQLELPEQVGQPK 282 Query: 203 AVPQLEDQV 177 + QLE Q+ Sbjct: 283 HLEQLEKQL 291
>INVO_AOTTR (P24708) Involucrin| Length = 544 Score = 31.2 bits (69), Expect = 2.7 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -2 Query: 485 EAQEGEEGQRPDARHQRDL*EEPDHHQ-ELRHLAALPEQDRLPQHVQGVPRHDSERRCGA 309 E E + GQ + E P+ + +L+HL Q LP+ V G P+H ++ Sbjct: 413 ELPEQQVGQSKHLEQEEKQLEHPEQQEGQLKHLGKQEAQLELPEQV-GQPKHLEQQEKQL 471 Query: 308 DVHGDGVXAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQV 177 + HP+ Q+ Q QEGQ + + Q E Q+ Sbjct: 472 E--------------HPEQQEGQLKPQEQQEGQLKGLEQQERQL 501 Score = 29.6 bits (65), Expect = 8.0 Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Frame = -2 Query: 533 GHQRGPRQVQVLVLPEEAQEG-------EEGQRPDARHQRDL*EEPDHHQ-ELRHLAALP 378 GH P Q + + E QEG +EGQ Q + + + +++HL Sbjct: 171 GHLELPEQQEGQLKCLEQQEGHQELPEQQEGQLKHLEQQEGQLKHLEQQEGQVKHLEQQE 230 Query: 377 EQDRLPQHVQGVPRHDSERRCGADVHGDGVXAPRAFPVHPDHQDCDGGLQAVQE-GQHEA 201 +Q LP+ +G P++ E++ G H + + H +HQ +G L+ ++ GQ + Sbjct: 231 KQSELPEQQRGQPKY-LEQQEGQLKH---LEEQKGQLKHLEHQ--EGQLELPEQVGQPKH 284 Query: 200 VPQLEDQV 177 + QLE Q+ Sbjct: 285 LEQLEKQL 292
>CYSP_PLAFA (P25805) Trophozoite cysteine proteinase precursor (EC 3.4.22.-)| (TCP) Length = 569 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = -3 Query: 526 NEVRAKSKFWYFLRKLKKVKKANGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYK 347 N ++ SKF+ F+++ KV K + + EIF+ N +IKN+ + N + Sbjct: 217 NNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFS 276 Query: 346 EYRDTTL 326 +Y + L Sbjct: 277 DYSEEEL 283
>HIS6_BLOPB (Q494D6) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 258 Score = 30.4 bits (67), Expect = 4.7 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -3 Query: 601 QVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAIN 437 Q V ++ T + Q KIY++K + + RAK W L +KKV++ + +N Sbjct: 123 QCVVVSIDTWHNPQKKIYQVKCYTGDSTRAKITTWQTLDWVKKVQEYGAGEIVLN 177
>PRSA2_LACJO (P60810) Foldase protein prsA 2 precursor (EC 5.2.1.8)| Length = 298 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 12/95 (12%) Frame = -3 Query: 517 RAKSKFWYFLRKLKKVKKANGQMLAINEIF------EKNPTTIKNYGIWLRYQSRTGYHN 356 R S+F FL++ KK+ QM+ +N + + PTT + W YQ + + Sbjct: 89 RYGSQFDSFLKENSYTKKSFKQMIELNHLSKIALKKQMKPTTSQLKEEWKDYQPKITVQH 148 Query: 355 MYKEYRDTT------LNGGVEQMYTEMASRHRVRS 269 + RDT LN G + + +AS++ V S Sbjct: 149 ISTTSRDTANTVIEKLNNG--ESFASLASKYSVDS 181
>RLX_METMP (Q6M157) 50S ribosomal protein LX| Length = 76 Score = 30.0 bits (66), Expect = 6.1 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = -3 Query: 349 KEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIKTATV 236 KEY N +E MY+E+ S+H V+ I++++ + + Sbjct: 22 KEYNVLKENDALETMYSEIGSKHAVKRANIKVVEISEI 59
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = -2 Query: 512 QVQVLVLPEEAQEGEEGQR-PDARHQRDL*EEPDHHQEL---RHLAALPEQDRLPQHVQG 345 Q Q++ + ++AQ+ + Q+ +H + ++P HHQ++ +H + +Q + Q +Q Sbjct: 115 QYQLMFMQQQAQQNQPPQQNQQQQHHQQQQQQPQHHQQMQQQQHHQQMQQQQQHHQQMQQ 174 Query: 344 VPRH 333 H Sbjct: 175 QQHH 178
>ELOA1_RAT (Q63187) Transcription elongation factor B polypeptide 3 (RNA| polymerase II transcription factor SIII subunit A) (SIII p110) (Elongin A) (EloA) (Elongin 110 kDa subunit) Length = 773 Score = 29.6 bits (65), Expect = 8.0 Identities = 21/82 (25%), Positives = 34/82 (41%) Frame = -2 Query: 560 AQDLPHEALGHQRGPRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAAL 381 A+D E ++ PR V P++ +E E + + P+H Q+ L Sbjct: 84 AEDQDFEKSNSRKRPRDV-----PQQEEEAEGNYQESWQASGSQPYSPEHRQKKHR--KL 136 Query: 380 PEQDRLPQHVQGVPRHDSERRC 315 PE +R + G R D +RC Sbjct: 137 PELERPHKVAHGHERRDERKRC 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,168,579 Number of Sequences: 219361 Number of extensions: 1542293 Number of successful extensions: 5507 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5198 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5491 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
