| Clone Name | rbags35a09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138M03, full insert sequence Length = 1102 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Minus Query: 555 agatttcgagcttagtgttcctgaaatggagttcaataactgttggctcctggcgaattg 614 ||||||||||||||||||||| || |||||||| |||| ||||| | ||| || ||||| Sbjct: 725 agatttcgagcttagtgttcccgatatggagtttaatagttgttgacacctagcaaattg 666 Query: 615 actggtcaattcttcaaccaatgcatcaaaagcttgatcccttgtgcctgttgcaatcgc 674 ||||||||| |||||||||| ||||||| || ||||||||||||||| || |||| || Sbjct: 665 actggtcaaatcttcaaccagtgcatcagaattttgatcccttgtgccctttccaatagc 606 Query: 675 atcacctaatcttgtc 690 |||| ||||||||||| Sbjct: 605 atcagctaatcttgtc 590 Score = 71.9 bits (36), Expect = 3e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 325 ctatcttgttggatcacccttaaggaggtcttccactgaggtcttgtattttgccatcaa 384 ||||||| ||| ||| ||||| || |||||||| || ||| | |||| |||| ||||| Sbjct: 851 ctatcttcttgtatcccccttgagcaggtcttcaacggagcttctgtactttgtgatcaa 792 Query: 385 atcctttctttgatcaagcagctgtcgtgtttcttccaaactttgcatttgtccttcaac 444 |||||| || |||||||| ||||| | |||||||||||||||| | ||||||||||||| Sbjct: 791 atccttcctctgatcaaggagctgctgcgtttcttccaaacttttcctttgtccttcaac 732
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 5e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 555 agatttcgagcttagtgttcctgaaatggagttcaataactgttggctcctggcgaattg 614 ||||||||||||||||||||| || |||||||| |||| ||||| | ||| || ||||| Sbjct: 17315933 agatttcgagcttagtgttcccgatatggagtttaatagttgttgacacctagcaaattg 17315992 Query: 615 actggtcaattcttcaacc 633 ||||||||| ||||||||| Sbjct: 17315993 actggtcaaatcttcaacc 17316011 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 631 accaatgcatcaaaagcttgatcccttgtgcctgttgcaatcgcatcacctaatcttgtc 690 |||| ||||||| || ||||||||||||||| || |||| |||||| ||||||||||| Sbjct: 17316807 accagtgcatcagaattttgatcccttgtgccctttccaatagcatcagctaatcttgtc 17316866 Query: 691 accaactgat 700 |||||||| Sbjct: 17316867 gtcaactgat 17316876 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 395 tgatcaagcagctgtcgtgtttcttccaaactttgcatttgtccttcaac 444 |||||||| ||||| | |||||||||||||||| | ||||||||||||| Sbjct: 17305886 tgatcaaggagctgctgcgtttcttccaaacttttcctttgtccttcaac 17305935
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 77.8 bits (39), Expect = 5e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 555 agatttcgagcttagtgttcctgaaatggagttcaataactgttggctcctggcgaattg 614 ||||||||||||||||||||| || |||||||| |||| ||||| | ||| || ||||| Sbjct: 82194 agatttcgagcttagtgttcccgatatggagtttaatagttgttgacacctagcaaattg 82253 Query: 615 actggtcaattcttcaacc 633 ||||||||| ||||||||| Sbjct: 82254 actggtcaaatcttcaacc 82272 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 631 accaatgcatcaaaagcttgatcccttgtgcctgttgcaatcgcatcacctaatcttgtc 690 |||| ||||||| || ||||||||||||||| || |||| |||||| ||||||||||| Sbjct: 83068 accagtgcatcagaattttgatcccttgtgccctttccaatagcatcagctaatcttgtc 83127 Query: 691 accaactgat 700 |||||||| Sbjct: 83128 gtcaactgat 83137 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 395 tgatcaagcagctgtcgtgtttcttccaaactttgcatttgtccttcaac 444 |||||||| ||||| | |||||||||||||||| | ||||||||||||| Sbjct: 72147 tgatcaaggagctgctgcgtttcttccaaacttttcctttgtccttcaac 72196
>emb|BX072038.1|CNS09RQY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 919 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 218 cccttgtgcctgttgcaatcg 238
>emb|BX068333.1|CNS09OW1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC52BH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 389 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 252 cccttgtgcctgttgcaatcg 272
>emb|BX065976.1|CNS09N2K Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC5AD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 910 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 212 cccttgtgcctgttgcaatcg 232
>emb|BX061993.1|CNS09JZX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC43AC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1002 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 240 cccttgtgcctgttgcaatcg 260
>emb|BX061992.1|CNS09JZW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43AC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1057 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 1015 cccttgtgcctgttgcaatcg 995
>emb|BX060238.1|CNS09IN6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC40CB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 196 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 79 cccttgtgcctgttgcaatcg 99
>emb|BX058442.1|CNS09H9A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC38DD08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 347 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 118 cccttgtgcctgttgcaatcg 138
>emb|BX052598.1|CNS09CQY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 789 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 231 cccttgtgcctgttgcaatcg 251
>emb|BX052597.1|CNS09CQX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 747 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 679 cccttgtgcctgttgcaatcg 659
>emb|BX052106.1|CNS09CDA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3AC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 527 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 118 cccttgtgcctgttgcaatcg 138
>emb|BX050826.1|CNS09BDQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC27CB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 868 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 222 cccttgtgcctgttgcaatcg 242
>emb|BX049822.1|CNS09ALU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC25DG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 974 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 231 cccttgtgcctgttgcaatcg 251
>emb|BX030920.1|CNS08W0S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA46AF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 984 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 236 cccttgtgcctgttgcaatcg 256
>emb|BX046543.1|CNS0982R Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC20BA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 920 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 904 cccttgtgcctgttgcaatcg 884
>emb|BX042049.1|CNS094LX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13DE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 944 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 226 cccttgtgcctgttgcaatcg 246
>emb|BX041561.1|CNS0948D Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13AB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 242 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 79 cccttgtgcctgttgcaatcg 99
>emb|BX036960.1|CNS090OK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9AH01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 970 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 238 cccttgtgcctgttgcaatcg 258
>emb|BX036058.1|CNS08ZZI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 985 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 235 cccttgtgcctgttgcaatcg 255
>emb|BX035771.1|CNS08ZRJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7BB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 805 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 231 cccttgtgcctgttgcaatcg 251
>emb|BX029669.1|CNS08V21 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA44BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 776 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 118 cccttgtgcctgttgcaatcg 138
>emb|BX028992.1|CNS08UJ8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA43BD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 762 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 118 cccttgtgcctgttgcaatcg 138
>emb|BX028005.1|CNS08TRT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41DF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 927 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 240 cccttgtgcctgttgcaatcg 260
>emb|BX023222.1|CNS08Q2Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA35CA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 698 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 261 cccttgtgcctgttgcaatcg 281
>emb|BX023221.1|CNS08Q2X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35CA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 998 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 820 cccttgtgcctgttgcaatcg 800
>emb|BX022101.1|CNS08P7T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA32DD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 214 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 115 cccttgtgcctgttgcaatcg 135
>emb|BX022052.1|CNS08P6G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA32DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 618 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 118 cccttgtgcctgttgcaatcg 138
>emb|BX019569.1|CNS08N9H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA29DE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 828 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 237 cccttgtgcctgttgcaatcg 257
>emb|BX019150.1|CNS08MXU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA29AE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 334 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 59 cccttgtgcctgttgcaatcg 79
>emb|BX018723.1|CNS08MLZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28BG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 229 cccttgtgcctgttgcaatcg 249
>emb|BX018239.1|CNS08M8J Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA27CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 758 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 224 cccttgtgcctgttgcaatcg 244
>emb|BX017233.1|CNS08LGL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25DG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 233 cccttgtgcctgttgcaatcg 253
>emb|BX016619.1|CNS08KZJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 898 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 248 cccttgtgcctgttgcaatcg 268
>emb|BX016072.1|CNS08KKC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24AE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 754 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 73 cccttgtgcctgttgcaatcg 93
>emb|BX016032.1|CNS08KJ8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24AC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 728 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 229 cccttgtgcctgttgcaatcg 249
>emb|BX014845.1|CNS08JM9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA22BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 226 cccttgtgcctgttgcaatcg 246
>emb|BX014835.1|CNS08JLZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA22BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 206 cccttgtgcctgttgcaatcg 226
>emb|BX012789.1|CNS08I15 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2BA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 485 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 197 cccttgtgcctgttgcaatcg 217
>emb|BX009476.1|CNS08FH4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1018 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 216 cccttgtgcctgttgcaatcg 236
>emb|BX007868.1|CNS08E8G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13AD01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 871 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 194 cccttgtgcctgttgcaatcg 214
>emb|BX007827.1|CNS08E7B Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 877 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 240 cccttgtgcctgttgcaatcg 260
>emb|BX007030.1|CNS08DL6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA11DC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 829 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 238 cccttgtgcctgttgcaatcg 258
>emb|BX006166.1|CNS08CX6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA10CA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 870 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cccttgtgcctgttgcaatcg 673 ||||||||||||||||||||| Sbjct: 227 cccttgtgcctgttgcaatcg 247
>emb|X57854.1|CTHDEG C.tropicalis hde gene for trifunctional enzyme, hydratase-dehydrogenase-epimerase Length = 4196 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 cgaattgactggtcaattctt 628 ||||||||||||||||||||| Sbjct: 1462 cgaattgactggtcaattctt 1482
>emb|AL596173.1| Listeria innocua Clip11262 complete genome, segment 11/12 Length = 305050 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 tcaaacaagttcacatcgcccattt 92 ||||||||||| ||||||||||||| Sbjct: 110924 tcaaacaagttgacatcgcccattt 110900
>gb|AF154037.2| Streptococcus pneumoniae strain srf10 surface protein PspC (pspC) gene, pspC-1.1 allele, complete cds Length = 3845 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 657 cccttctgcatggactactcc 637
>gb|AF154029.1| Streptococcus pneumoniae strain g408 surface protein PspC (pspC) gene, pspC-6.10 allele, complete cds Length = 3223 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 657 cccttctgcatggactactcc 637
>gb|AF154018.1| Streptococcus pneumoniae strain g38 surface protein PspC (pspC) gene, pspC-6.2 allele, complete cds Length = 2947 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 657 cccttctgcatggactactcc 637
>gb|AF154017.1| Streptococcus pneumoniae strain g378 surface protein PspC (pspC) gene, pspC-6.7 allele, complete cds Length = 3064 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 657 cccttctgcatggactactcc 637
>gb|AF154016.1| Streptococcus pneumoniae strain g376 surface protein PspC (pspC) gene, pspC-6.6 allele, complete cds Length = 3007 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 657 cccttctgcatggactactcc 637
>gb|AF154010.1| Streptococcus pneumoniae strain 8R1 surface protein PspC (pspC) gene, pspC-6.11 allele, complete cds Length = 2932 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 657 cccttctgcatggactactcc 637
>gb|AF068650.1|AF068650 Streptococcus pneumoniae strain BG9163 pspC gene, partial cds Length = 2612 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 268 cccttctgcatggactactcc 248
>gb|AF068645.1|AF068645 Streptococcus pneumoniae strain DBL6A pspC gene, partial cds Length = 1590 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 243 cccttctgcatggactactcc 223
>gb|U72655.1|SPU72655 Streptococcus pneumoniae surface protein C (pspC) gene, complete cds Length = 3463 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cccttctgcatggactactcc 215 ||||||||||||||||||||| Sbjct: 435 cccttctgcatggactactcc 415
>gb|M22765.1|YSAHDE Candida tropicalis peroxisomal trifunctional enzyme hydratase-dehydrogenase-epimerase (HDE) mRNA, complete cds Length = 2830 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 cgaattgactggtcaattctt 628 ||||||||||||||||||||| Sbjct: 725 cgaattgactggtcaattctt 745 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,831,899 Number of Sequences: 3902068 Number of extensions: 5831899 Number of successful extensions: 102694 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102603 Number of HSP's gapped (non-prelim): 91 length of query: 731 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 708 effective length of database: 17,143,297,704 effective search space: 12137454774432 effective search space used: 12137454774432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)