| Clone Name | rbags35a07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL355504.17| Human DNA sequence from clone RP11-218A18 on chromosome 13 Contains a mitochondrial import receptor Tom22 pseudogene, complete sequence Length = 60159 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 aagataaatgcccttgttctccctc 53 |||||||||||| |||||||||||| Sbjct: 50666 aagataaatgcctttgttctccctc 50642
>emb|Z92540.1|HS179I15A Human DNA sequence from clone RP1-179I15 on chromosome 13. Contains a novel gene, a mitochondrial import receptor TOM22 pseudogene, the 5' end of the KL gene for klotho, ESTs, STSs and a CpG island, complete sequence Length = 146810 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 aagataaatgcccttgttctccctc 53 |||||||||||| |||||||||||| Sbjct: 82429 aagataaatgcctttgttctccctc 82405
>gb|AC151775.1| Ornithorhynchus anatinus chromosome UNK clone OABb-307A1, complete sequence Length = 195598 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acaaatatttacatttctgc 26 |||||||||||||||||||| Sbjct: 62703 acaaatatttacatttctgc 62684
>gb|AY522504.1| Lyngbya majuscula jamaicamide biosynthesis gene cluster, complete sequence Length = 69900 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gagcccctttaaccatacca 297 |||||||||||||||||||| Sbjct: 20233 gagcccctttaaccatacca 20214
>gb|AF289076.4| Homo sapiens chromosome 8 clone CTD-2372o24 map q21.3, complete sequence Length = 101256 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 caaatgccatacaacagaacccct 367 ||||||||||||||||| |||||| Sbjct: 28892 caaatgccatacaacagcacccct 28869
>gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21.3, complete sequence Length = 125222 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 caaatgccatacaacagaacccct 367 ||||||||||||||||| |||||| Sbjct: 114556 caaatgccatacaacagcacccct 114533
>gb|AC153360.6| Mus musculus BAC clone RP23-321I6 from chromosome 10, complete sequence Length = 233014 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 aaatgccatacaacagaacc 364 |||||||||||||||||||| Sbjct: 155357 aaatgccatacaacagaacc 155338
>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence Length = 238123 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggaactggagataatgaaa 159 |||||||||||||||||||| Sbjct: 150119 cggaactggagataatgaaa 150138
>gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, complete sequence Length = 176632 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 caaatgccatacaacagaacccct 367 ||||||||||||||||| |||||| Sbjct: 42082 caaatgccatacaacagcacccct 42105
>gb|AC122332.4| Mus musculus BAC clone RP23-346G14 from chromosome 10, complete sequence Length = 214728 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 aaatgccatacaacagaacc 364 |||||||||||||||||||| Sbjct: 213477 aaatgccatacaacagaacc 213458
>gb|AF028810.2|AF028810 Rhizobium leguminosarum bv. viciae VF39 acidic exopolysaccharide biosynthesis gene cluster, complete sequence Length = 20766 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gcgcgaaatctggctgatgc 242 |||||||||||||||||||| Sbjct: 10648 gcgcgaaatctggctgatgc 10629
>gb|AC097717.3| Homo sapiens BAC clone RP11-650N19 from 2, complete sequence Length = 142978 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agataatgaaaagatgcaca 168 |||||||||||||||||||| Sbjct: 49297 agataatgaaaagatgcaca 49278
>gb|AF040104.1|AF040104 Rhizobium leguminosarum bv. trifolii polysaccharide export protein (pssL), polysaccharide polymerization protein (pssK), and glycosyl transferase homolog (pssI) genes, complete cds Length = 4527 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gcgcgaaatctggctgatgc 242 |||||||||||||||||||| Sbjct: 2336 gcgcgaaatctggctgatgc 2317 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,150,495 Number of Sequences: 3902068 Number of extensions: 4150495 Number of successful extensions: 120481 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120448 Number of HSP's gapped (non-prelim): 33 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)