ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_466206.1| Oryza sativa (japonica cultivar-group), mRNA 274 3e-70
2ref|XM_506825.1| PREDICTED Oryza sativa (japonica cultivar-group... 274 3e-70
3dbj|AK103125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
4dbj|AK059938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
5gb|AY109942.1| Zea mays CL16458_1 mRNA sequence 256 8e-65
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
8gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408... 44 0.56
9gb|BC106368.1| Xenopus laevis cDNA clone MGC:130927 IMAGE:739327... 42 2.2
10gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's H... 42 2.2
11gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's H... 42 2.2
12emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chro... 42 2.2
13gb|AC114277.2| Homo sapiens chromosome 5 clone CTD-2009F3, compl... 42 2.2
14gb|AC026439.4| Homo sapiens chromosome 5 clone CTD-2267H19, comp... 42 2.2
15gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, co... 42 2.2
16dbj|AB074982.1| Homo sapiens gene for MTG8b, partial cds 42 2.2
17gb|BC075524.1| Xenopus tropicalis pyroglutamyl-peptidase I, mRNA... 40 8.7
18gb|AY389735.1| Hyacinthus orientalis 60S ribosomal protein L13 m... 40 8.7
19gb|BT013739.1| Lycopersicon esculentum clone 132600F, mRNA sequence 40 8.7
20emb|CT030462.1| Xenopus tropicalis finished cDNA, clone TGas091d12 40 8.7
21gb|DQ478934.1| Drosophila melanogaster hexokinase (Hex-A) gene, ... 40 8.7
22ref|NM_001006751.1| Xenopus tropicalis pyroglutamyl-peptidase I ... 40 8.7
23gb|AC068394.14| Homo sapiens chromosome 8, clone RP11-340H8, com... 40 8.7
24gb|AC105292.3| Drosophila melanogaster X BAC RP98-18F10 (Roswell... 40 8.7
25gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromoso... 40 8.7
26emb|BX005032.10| Zebrafish DNA sequence from clone CH211-180P9 i... 40 8.7
27gb|AC084013.5| Homo sapiens BAC clone RP11-169I13 from 2, comple... 40 8.7
28gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 ... 40 8.7
29gb|AC004804.1|AC004804 Homo sapiens 12p13.3 PAC RPCI5-927J10 (Ro... 40 8.7
30emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in... 40 8.7
31gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.64... 40 8.7

>ref|XM_466206.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1167

 Score =  274 bits (138), Expect = 3e-70
 Identities = 288/338 (85%)
 Strand = Plus / Minus

                                                                       
Query: 303 tacttctgctcgctgtagcgcatgatgccatacacatcaacgataccaggagggaacacc 362
           |||||||| || ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| 
Sbjct: 958 tacttctggtcactgtatcgcatgatgccgtacacatcaacaatacccggaggaaacact 899

                                                                       
Query: 363 gggtccgtcgctgctcttacagcgaccttcgctactgaggcagcgctcactggaggagtt 422
           || || || ||||||||||||||||||||||| || |||||| | ||||||||||| || 
Sbjct: 898 ggatcagttgctgctcttacagcgaccttcgccacggaggcaacactcactggaggggtc 839

                                                                       
Query: 423 agcatcgggccaacaagtggcaatctggttaatggttttgcattttggagcaccatttgc 482
           | ||  |||||||| || |||||||| || || || || ||| ||||||| |||||||||
Sbjct: 838 aacagtgggccaaccagcggcaatctcgtcaacggcttcgcactttggagaaccatttgc 779

                                                                       
Query: 483 ataggcgaacccacaagtccaaggggtatgttcatgctacccactcgacgagttccatgg 542
           ||||| ||||| ||||||||||| ||||| || | |||||| || || ||||||||||| 
Sbjct: 778 ataggagaaccaacaagtccaagaggtatttttacgctaccgacacggcgagttccatga 719

                                                                       
Query: 543 ataaaaccaggccgcaatatcactcctccataggtaaacttcgacagaagttcagcttca 602
           ||||||||||||| ||| |||||||| ||||||||||| || || || ||||||||||||
Sbjct: 718 ataaaaccaggcctcaaaatcactccgccataggtaaattttgatagcagttcagcttca 659

                                                 
Query: 603 gcagctctcttgccctcataataaccttgcaataagta 640
           |  || |||||||||||||||||||||||||| |||||
Sbjct: 658 gttgccctcttgccctcataataaccttgcaacaagta 621



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>ref|XM_506825.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_F08.11
           mRNA
          Length = 1238

 Score =  274 bits (138), Expect = 3e-70
 Identities = 288/338 (85%)
 Strand = Plus / Minus

                                                                       
Query: 303 tacttctgctcgctgtagcgcatgatgccatacacatcaacgataccaggagggaacacc 362
           |||||||| || ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| 
Sbjct: 970 tacttctggtcactgtatcgcatgatgccgtacacatcaacaatacccggaggaaacact 911

                                                                       
Query: 363 gggtccgtcgctgctcttacagcgaccttcgctactgaggcagcgctcactggaggagtt 422
           || || || ||||||||||||||||||||||| || |||||| | ||||||||||| || 
Sbjct: 910 ggatcagttgctgctcttacagcgaccttcgccacggaggcaacactcactggaggggtc 851

                                                                       
Query: 423 agcatcgggccaacaagtggcaatctggttaatggttttgcattttggagcaccatttgc 482
           | ||  |||||||| || |||||||| || || || || ||| ||||||| |||||||||
Sbjct: 850 aacagtgggccaaccagcggcaatctcgtcaacggcttcgcactttggagaaccatttgc 791

                                                                       
Query: 483 ataggcgaacccacaagtccaaggggtatgttcatgctacccactcgacgagttccatgg 542
           ||||| ||||| ||||||||||| ||||| || | |||||| || || ||||||||||| 
Sbjct: 790 ataggagaaccaacaagtccaagaggtatttttacgctaccgacacggcgagttccatga 731

                                                                       
Query: 543 ataaaaccaggccgcaatatcactcctccataggtaaacttcgacagaagttcagcttca 602
           ||||||||||||| ||| |||||||| ||||||||||| || || || ||||||||||||
Sbjct: 730 ataaaaccaggcctcaaaatcactccgccataggtaaattttgatagcagttcagcttca 671

                                                 
Query: 603 gcagctctcttgccctcataataaccttgcaataagta 640
           |  || |||||||||||||||||||||||||| |||||
Sbjct: 670 gttgccctcttgccctcataataaccttgcaacaagta 633



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>dbj|AK103125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119M03, full
           insert sequence
          Length = 1238

 Score =  274 bits (138), Expect = 3e-70
 Identities = 288/338 (85%)
 Strand = Plus / Minus

                                                                       
Query: 303 tacttctgctcgctgtagcgcatgatgccatacacatcaacgataccaggagggaacacc 362
           |||||||| || ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| 
Sbjct: 970 tacttctggtcactgtatcgcatgatgccgtacacatcaacaatacccggaggaaacact 911

                                                                       
Query: 363 gggtccgtcgctgctcttacagcgaccttcgctactgaggcagcgctcactggaggagtt 422
           || || || ||||||||||||||||||||||| || |||||| | ||||||||||| || 
Sbjct: 910 ggatcagttgctgctcttacagcgaccttcgccacggaggcaacactcactggaggggtc 851

                                                                       
Query: 423 agcatcgggccaacaagtggcaatctggttaatggttttgcattttggagcaccatttgc 482
           | ||  |||||||| || |||||||| || || || || ||| ||||||| |||||||||
Sbjct: 850 aacagtgggccaaccagcggcaatctcgtcaacggcttcgcactttggagaaccatttgc 791

                                                                       
Query: 483 ataggcgaacccacaagtccaaggggtatgttcatgctacccactcgacgagttccatgg 542
           ||||| ||||| ||||||||||| ||||| || | |||||| || || ||||||||||| 
Sbjct: 790 ataggagaaccaacaagtccaagaggtatttttacgctaccgacacggcgagttccatga 731

                                                                       
Query: 543 ataaaaccaggccgcaatatcactcctccataggtaaacttcgacagaagttcagcttca 602
           ||||||||||||| ||| |||||||| ||||||||||| || || || ||||||||||||
Sbjct: 730 ataaaaccaggcctcaaaatcactccgccataggtaaattttgatagcagttcagcttca 671

                                                 
Query: 603 gcagctctcttgccctcataataaccttgcaataagta 640
           |  || |||||||||||||||||||||||||| |||||
Sbjct: 670 gttgccctcttgccctcataataaccttgcaacaagta 633



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>dbj|AK059938.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E01, full
           insert sequence
          Length = 1167

 Score =  274 bits (138), Expect = 3e-70
 Identities = 288/338 (85%)
 Strand = Plus / Minus

                                                                       
Query: 303 tacttctgctcgctgtagcgcatgatgccatacacatcaacgataccaggagggaacacc 362
           |||||||| || ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| 
Sbjct: 958 tacttctggtcactgtatcgcatgatgccgtacacatcaacaatacccggaggaaacact 899

                                                                       
Query: 363 gggtccgtcgctgctcttacagcgaccttcgctactgaggcagcgctcactggaggagtt 422
           || || || ||||||||||||||||||||||| || |||||| | ||||||||||| || 
Sbjct: 898 ggatcagttgctgctcttacagcgaccttcgccacggaggcaacactcactggaggggtc 839

                                                                       
Query: 423 agcatcgggccaacaagtggcaatctggttaatggttttgcattttggagcaccatttgc 482
           | ||  |||||||| || |||||||| || || || || ||| ||||||| |||||||||
Sbjct: 838 aacagtgggccaaccagcggcaatctcgtcaacggcttcgcactttggagaaccatttgc 779

                                                                       
Query: 483 ataggcgaacccacaagtccaaggggtatgttcatgctacccactcgacgagttccatgg 542
           ||||| ||||| ||||||||||| ||||| || | |||||| || || ||||||||||| 
Sbjct: 778 ataggagaaccaacaagtccaagaggtatttttacgctaccgacacggcgagttccatga 719

                                                                       
Query: 543 ataaaaccaggccgcaatatcactcctccataggtaaacttcgacagaagttcagcttca 602
           ||||||||||||| ||| |||||||| ||||||||||| || || || ||||||||||||
Sbjct: 718 ataaaaccaggcctcaaaatcactccgccataggtaaattttgatagcagttcagcttca 659

                                                 
Query: 603 gcagctctcttgccctcataataaccttgcaataagta 640
           |  || |||||||||||||||||||||||||| |||||
Sbjct: 658 gttgccctcttgccctcataataaccttgcaacaagta 621



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>gb|AY109942.1| Zea mays CL16458_1 mRNA sequence
          Length = 1067

 Score =  256 bits (129), Expect = 8e-65
 Identities = 279/329 (84%)
 Strand = Plus / Minus

                                                                       
Query: 309 tgctcgctgtagcgcatgatgccatacacatcaacgataccaggagggaacaccgggtcc 368
           ||||||||||| |||||||| || || ||||||||||| |||||||| |||||||| |||
Sbjct: 940 tgctcgctgtaacgcatgatcccgtagacatcaacgatgccaggaggaaacaccggatcc 881

                                                                       
Query: 369 gtcgctgctcttacagcgaccttcgctactgaggcagcgctcactggaggagttagcatc 428
           ||||||||||| |||||||||||| | || |||||||| || || |||||||| |  | |
Sbjct: 880 gtcgctgctctcacagcgaccttccccacggaggcagcactgacgggaggagtcaatagc 821

                                                                       
Query: 429 gggccaacaagtggcaatctggttaatggttttgcattttggagcaccatttgcataggc 488
           || || | |||||| || || || || ||||||  ||||||||||||||| |||||||| 
Sbjct: 820 ggcccgataagtggtaacctagtcaaaggttttatattttggagcaccatctgcatagga 761

                                                                       
Query: 489 gaacccacaagtccaaggggtatgttcatgctacccactcgacgagttccatggataaaa 548
           ||||| ||||| ||||| ||||| || |  || |||||||||||||||||||| ||||||
Sbjct: 760 gaaccgacaagaccaagaggtatctttacactgcccactcgacgagttccatgaataaaa 701

                                                                       
Query: 549 ccaggccgcaatatcactcctccataggtaaacttcgacagaagttcagcttcagcagct 608
           ||||||| || ||||||||||||||| |||||||| ||||  | ||||||||||| ||| 
Sbjct: 700 ccaggcctcagtatcactcctccatatgtaaactttgacaacaattcagcttcagaagcc 641

                                        
Query: 609 ctcttgccctcataataaccttgcaataa 637
           ||||||||||| ||||| |||||||||||
Sbjct: 640 ctcttgccctcgtaatagccttgcaataa 612



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  115 bits (58), Expect = 2e-22
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                            
Query: 303      tacttctgctcgctgtagcgcatgatgccatacacatcaacgataccaggagggaacacc 362
                |||||||| || ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| 
Sbjct: 21057918 tacttctggtcactgtatcgcatgatgccgtacacatcaacaatacccggaggaaacact 21057859

                                                                            
Query: 363      gggtccgtcgctgctcttacagcgaccttcgctactgaggcagcgctcactggaggagtt 422
                || || || ||||||||||||||||||||||| || |||||| | ||||||||||| || 
Sbjct: 21057858 ggatcagttgctgctcttacagcgaccttcgccacggaggcaacactcactggaggggtc 21057799

                                          
Query: 423      agcatcgggccaacaagtggcaatct 448
                | ||  |||||||| || ||||||||
Sbjct: 21057798 aacagtgggccaaccagcggcaatct 21057773



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                            
Query: 474      accatttgcataggcgaacccacaagtccaaggggtatgttcatgctacccactcgacga 533
                |||||||||||||| ||||| ||||||||||| ||||| || | |||||| || || |||
Sbjct: 21057632 accatttgcataggagaaccaacaagtccaagaggtatttttacgctaccgacacggcga 21057573

                                                    
Query: 534      gttccatggataaaaccaggccgcaatatcactcct 569
                |||||||| ||||||||||||| ||| |||||||||
Sbjct: 21057572 gttccatgaataaaaccaggcctcaaaatcactcct 21057537



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 611      cttgccctcataataaccttgcaataagta 640
                |||||||||||||||||||||||| |||||
Sbjct: 21051480 cttgccctcataataaccttgcaacaagta 21051451



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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score =  115 bits (58), Expect = 2e-22
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                         
Query: 303   tacttctgctcgctgtagcgcatgatgccatacacatcaacgataccaggagggaacacc 362
             |||||||| || ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| 
Sbjct: 59663 tacttctggtcactgtatcgcatgatgccgtacacatcaacaatacccggaggaaacact 59604

                                                                         
Query: 363   gggtccgtcgctgctcttacagcgaccttcgctactgaggcagcgctcactggaggagtt 422
             || || || ||||||||||||||||||||||| || |||||| | ||||||||||| || 
Sbjct: 59603 ggatcagttgctgctcttacagcgaccttcgccacggaggcaacactcactggaggggtc 59544

                                       
Query: 423   agcatcgggccaacaagtggcaatct 448
             | ||  |||||||| || ||||||||
Sbjct: 59543 aacagtgggccaaccagcggcaatct 59518



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                         
Query: 474   accatttgcataggcgaacccacaagtccaaggggtatgttcatgctacccactcgacga 533
             |||||||||||||| ||||| ||||||||||| ||||| || | |||||| || || |||
Sbjct: 59377 accatttgcataggagaaccaacaagtccaagaggtatttttacgctaccgacacggcga 59318

                                                 
Query: 534   gttccatggataaaaccaggccgcaatatcactcct 569
             |||||||| ||||||||||||| ||| |||||||||
Sbjct: 59317 gttccatgaataaaaccaggcctcaaaatcactcct 59282



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 611   cttgccctcataataaccttgcaataagta 640
             |||||||||||||||||||||||| |||||
Sbjct: 53225 cttgccctcataataaccttgcaacaagta 53196



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>gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408J6 map 15q21.1, complete
              sequence
          Length = 193804

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 88     caggcaacaaacatgtaaaaaa 109
              ||||||||||||||||||||||
Sbjct: 157135 caggcaacaaacatgtaaaaaa 157114



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>gb|BC106368.1| Xenopus laevis cDNA clone MGC:130927 IMAGE:7393278, complete cds
          Length = 1018

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 595 cagcttcagcagctctcttgc 615
           |||||||||||||||||||||
Sbjct: 601 cagcttcagcagctctcttgc 581



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>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 184149

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 448    tggttaatggttttgcatttt 468
              |||||||||||||||||||||
Sbjct: 159636 tggttaatggttttgcatttt 159616



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>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227849

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    tggttaatggttttgcatttt 468
              |||||||||||||||||||||
Sbjct: 166136 tggttaatggttttgcatttt 166156



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>emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chromosome 11 Contains the 5'
              end of the Kcnip1 gene for Kv channel-interacting protein
              1, the Kcnmb1 gene for potassium large conductance
              calcium-activated channel, subfamily M, beta member 1 and
              the 3' end of a novel gene, complete sequence
          Length = 173783

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    taaaaaacagtttccaacagg 123
              |||||||||||||||||||||
Sbjct: 113468 taaaaaacagtttccaacagg 113448



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>gb|AC114277.2| Homo sapiens chromosome 5 clone CTD-2009F3, complete sequence
          Length = 100496

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 26    aaactcaaaggaagttacagatctt 50
             ||||||||||| |||||||||||||
Sbjct: 27528 aaactcaaagggagttacagatctt 27552



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>gb|AC026439.4| Homo sapiens chromosome 5 clone CTD-2267H19, complete sequence
          Length = 105081

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 26     aaactcaaaggaagttacagatctt 50
              ||||||||||| |||||||||||||
Sbjct: 100802 aaactcaaagggagttacagatctt 100778



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>gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, complete sequence
          Length = 194212

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 65    cagtcactaaaaaagaacactttca 89
             |||||||| ||||||||||||||||
Sbjct: 60389 cagtcacttaaaaagaacactttca 60413



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>dbj|AB074982.1| Homo sapiens gene for MTG8b, partial cds
          Length = 15784

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 65   cagtcactaaaaaagaacactttca 89
            |||||||| ||||||||||||||||
Sbjct: 1984 cagtcacttaaaaagaacactttca 1960



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>gb|BC075524.1| Xenopus tropicalis pyroglutamyl-peptidase I, mRNA (cDNA clone
           MGC:89415 IMAGE:6990019), complete cds
          Length = 1649

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 596 agcttcagcagctctcttgc 615
           ||||||||||||||||||||
Sbjct: 842 agcttcagcagctctcttgc 823



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>gb|AY389735.1| Hyacinthus orientalis 60S ribosomal protein L13 mRNA, partial cds
          Length = 442

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 594 tcagcttcagcagctctctt 613
           ||||||||||||||||||||
Sbjct: 234 tcagcttcagcagctctctt 215



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>gb|BT013739.1| Lycopersicon esculentum clone 132600F, mRNA sequence
          Length = 1112

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 600 tcagcagctctcttgccctcataataaccttg 631
           |||||||||| ||| || ||||||||||||||
Sbjct: 621 tcagcagctcccttcccatcataataaccttg 590



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>emb|CT030462.1| Xenopus tropicalis finished cDNA, clone TGas091d12
          Length = 4491

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 596 agcttcagcagctctcttgc 615
           ||||||||||||||||||||
Sbjct: 460 agcttcagcagctctcttgc 441



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>gb|DQ478934.1| Drosophila melanogaster hexokinase (Hex-A) gene, promoter and partial
            cds
          Length = 2201

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 448  tggttaatggttttgcattt 467
            ||||||||||||||||||||
Sbjct: 1112 tggttaatggttttgcattt 1093



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>ref|NM_001006751.1| Xenopus tropicalis pyroglutamyl-peptidase I (pgpep1), mRNA
          Length = 1649

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 596 agcttcagcagctctcttgc 615
           ||||||||||||||||||||
Sbjct: 842 agcttcagcagctctcttgc 823



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>gb|AC068394.14| Homo sapiens chromosome 8, clone RP11-340H8, complete sequence
          Length = 177005

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 594    tcagcttcagcagctctctt 613
              ||||||||||||||||||||
Sbjct: 128073 tcagcttcagcagctctctt 128092



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>gb|AC105292.3| Drosophila melanogaster X BAC RP98-18F10 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 161360

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   tggttaatggttttgcattt 467
             ||||||||||||||||||||
Sbjct: 23045 tggttaatggttttgcattt 23064



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>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete
             sequence
          Length = 212965

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   aatggttttgcattttggag 472
             ||||||||||||||||||||
Sbjct: 25785 aatggttttgcattttggag 25804



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>emb|BX005032.10| Zebrafish DNA sequence from clone CH211-180P9 in linkage group 16,
             complete sequence
          Length = 155001

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   acaagtccaaggggtatgtt 514
             ||||||||||||||||||||
Sbjct: 67445 acaagtccaaggggtatgtt 67426



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>gb|AC084013.5| Homo sapiens BAC clone RP11-169I13 from 2, complete sequence
          Length = 105604

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    ttcaggcaacaaacatgtaaaaaa 109
             ||||| ||||||||||||||||||
Sbjct: 22684 ttcagtcaacaaacatgtaaaaaa 22707



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>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete
              sequence
          Length = 288721

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 448    tggttaatggttttgcattt 467
              ||||||||||||||||||||
Sbjct: 245510 tggttaatggttttgcattt 245491



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>gb|AC004804.1|AC004804 Homo sapiens 12p13.3 PAC RPCI5-927J10 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 108879

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    ttctctacagtcactaaaaaagaa 81
             |||| |||||||||||||||||||
Sbjct: 95386 ttctatacagtcactaaaaaagaa 95409



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>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17,
             complete sequence
          Length = 205685

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   attttggagcaccatttgca 483
             ||||||||||||||||||||
Sbjct: 30853 attttggagcaccatttgca 30834



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>gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.642_C_21, complete sequence
          Length = 172084

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gaggcatcatttagagcaaa 238
             ||||||||||||||||||||
Sbjct: 28646 gaggcatcatttagagcaaa 28627


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,739,507
Number of Sequences: 3902068
Number of extensions: 5739507
Number of successful extensions: 101677
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101610
Number of HSP's gapped (non-prelim): 66
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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