ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34l02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ535213.1|OSA535213 Oryza sativa mRNA for SMC6 protein 212 1e-51
2gb|AY110723.1| Zea mays CL29579_1 mRNA sequence 117 5e-23
3ref|NM_125539.1| Arabidopsis thaliana MIM; ATP binding AT5G61460... 94 7e-16
4gb|AF120933.1|AF120933 Arabidopsis thaliana SMC-like protein (MI... 94 7e-16
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
6dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
7gb|AC149268.21| Medicago truncatula clone mth2-94j16, complete s... 58 4e-05
8gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete seq... 58 4e-05
9dbj|AB016887.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 6e-04
10gb|AF120932.1|AF120932 Arabidopsis thaliana SMC-like protein (MI... 54 6e-04
11ref|NM_120848.1| Arabidopsis thaliana ATP binding AT5G07660 mRNA... 46 0.15
12gb|AC074289.6| Homo sapiens BAC clone RP11-207O24 from 2, comple... 44 0.60
13gb|AC162892.7| Mus musculus chromosome 5, clone RP23-257D19, com... 42 2.4
14gb|AC132303.3| Mus musculus BAC clone RP24-281P9 from chromosome... 42 2.4
15gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosom... 42 2.4
16gb|AC112271.4| Mus musculus BAC clone RP24-121H20 from chromosom... 42 2.4
17ref|XM_645549.1| Entamoeba histolytica HM-1:IMSS structural main... 42 2.4
18ref|XM_648722.1| Entamoeba histolytica HM-1:IMSS structural main... 42 2.4
19ref|XM_789727.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.4
20emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC... 42 2.4
21gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 2.4
22gb|AC159262.3| Mus musculus BAC clone RP24-82I20 from chromosome... 42 2.4
23gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete... 42 2.4
24emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in... 42 2.4
25emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on ch... 42 2.4
26gb|AC161802.7| Mus musculus chromosome 5, clone RP23-477G6, comp... 42 2.4
27gb|AF348085.1| Danio rerio focal adhesion kinase 1a (fak1a) mRNA... 40 9.3
28gb|AF313879.1| Uncultured methanogen RS-ME47 methyl-coenzyme M r... 40 9.3
29gb|AF313864.1| Uncultured methanogen RS-ME29 methyl-coenzyme M r... 40 9.3
30gb|AF313815.1| Uncultured methanogen RS-MCR09 methyl-coenzyme M ... 40 9.3
31gb|AY350715.1| Arabidopsis arenosa clone BAC Aer1B10, complete s... 40 9.3
32gb|AY350712.1| Arabidopsis arenosa clone BAC Aer6D24, complete s... 40 9.3
33gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete s... 40 9.3
34emb|AL513215.7| Human DNA sequence from clone RP11-530P14 on chr... 40 9.3
35emb|AL157932.21| Human DNA sequence from clone RP11-187A9 on chr... 40 9.3
36emb|AL031177.1|HS889N15 Human DNA sequence from clone RP5-889N15... 40 9.3
37gb|AY125672.1| Uncultured Methanobacteriaceae archaeon MRR-mcr74... 40 9.3
38gb|AY125663.1| Uncultured Methanobacteriaceae archaeon MRR-mcr66... 40 9.3
39gb|AY125645.1| Uncultured Methanobacteriaceae archaeon MRR-mcr5 ... 40 9.3
40gb|AY125644.1| Uncultured Methanobacteriaceae archaeon MRR-mcr49... 40 9.3
41gb|AY125642.1| Uncultured Methanobacteriaceae archaeon MRR-mcr47... 40 9.3
42gb|AY125641.1| Uncultured Methanobacteriaceae archaeon MRR-mcr46... 40 9.3
43gb|AY125639.1| Uncultured Methanobacteriaceae archaeon MRR-mcr44... 40 9.3
44gb|AY125635.1| Uncultured Methanobacteriaceae archaeon MRR-mcr40... 40 9.3
45gb|AY125630.1| Uncultured Methanobacteriaceae archaeon MRR-mcr36... 40 9.3
46gb|AY125624.1| Uncultured Methanobacteriaceae archaeon MRR-mcr30... 40 9.3
47gb|AY125623.1| Uncultured Methanobacteriaceae archaeon MRR-mcr3 ... 40 9.3
48emb|X62302.1|MMEZGL Mouse embryonic zeta-globin gene 40 9.3
49emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chrom... 40 9.3
50emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on ch... 40 9.3
51gb|AC091683.53| Mus musculus strain C57BL/6J clone rp23-155l11 m... 40 9.3
52ref|NM_134496.2| Drosophila melanogaster CG14215-RA (CG14215), mRNA 40 9.3
53gb|AY058601.1| Drosophila melanogaster LD29239 full length cDNA 40 9.3
54gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 9.3
55gb|AF271755.1|AF271755 Pseudosciadium balansae maturase (matK) g... 40 9.3
56gb|AF271754.1|AF271754 Myodocarpus simplicifolius maturase (matK... 40 9.3
57gb|AF271753.1|AF271753 Myodocarpus gracilis maturase (matK) gene... 40 9.3
58gb|AF271750.1|AF271750 Myodocarpus crassifolius maturase (matK) ... 40 9.3
59gb|AF271749.1|AF271749 Myodocarpus involucratus maturase (matK) ... 40 9.3
60gb|AF271748.1|AF271748 Myodocarpus lanceolatus maturase (matK) g... 40 9.3
61gb|AF271747.1|AF271747 Myodocarpus fraxinifolius maturase (matK)... 40 9.3
62gb|AF271745.1|AF271745 Delarbrea montana maturase (matK) gene, p... 40 9.3
63gb|AF271743.1|AF271743 Delarbrea collina maturase (matK) gene, p... 40 9.3
64gb|AF271742.1|AF271742 Delarbrea paradoxa maturase (matK) gene, ... 40 9.3
65gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, re... 40 9.3
66gb|AC114792.4| Homo sapiens BAC clone RP11-658J5 from 2, complet... 40 9.3
67gb|AC084525.1|CBRG21D12 Caenorhabditis briggsae cosmid G21D12, c... 40 9.3
68gb|AC093570.30| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 9.3
69emb|BX119985.7| Zebrafish DNA sequence from clone CH211-270B10 i... 40 9.3
70dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.3
71ref|NM_210258.1| Eremothecium gossypii AER044Wp (AER044W), mRNA 40 9.3
72gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 9.3
73gb|AC110211.16| Mus musculus chromosome 15, clone RP23-192B21, c... 40 9.3
74gb|AC125070.4| Mus musculus BAC clone RP23-443A7 from 13, comple... 40 9.3
75gb|U58608.1|DMU58608 Delarbrea michieana maturase (matK) gene, c... 40 9.3
76ref|NM_131796.1| Danio rerio protein tyrosine kinase 2.1 (ptk2.1... 40 9.3 
>emb|AJ535213.1|OSA535213 Oryza sativa mRNA for SMC6 protein
          Length = 3123

 Score =  212 bits (107), Expect = 1e-51
 Identities = 230/271 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  tcaaccgcgaggggcggccatttgctgcttcttgactcgatctccaggcttcaccatgct 294
            ||||||||| ||||| |||||||||||||||||||  |  |||||||| | |||||||||
Sbjct: 3123 tcaaccgcgtggggcagccatttgctgcttcttgatcctgtctccaggttgcaccatgct 3064

                                                                        
Query: 295  gatatcatgcggtgttataagtacccattgtgacccttgtgcaacagcaaaatctaccaa 354
            ||||||||| |||||||||| || ||| ||||| ||||| |  || || |||||||| | 
Sbjct: 3063 gatatcatgtggtgttataaatatccactgtgatccttgcgtgacggcgaaatctactag 3004

                                                                        
Query: 355  ggtgtccaagcttattttgcgactcactgcatccatgaatacatcaaactcatccatggc 414
            |||||| | |||||| ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 3003 ggtgtctaggcttatcttgcggcttactgcatccatgaatacatcaaactcatccatggc 2944

                                                                        
Query: 415  tctaaaaggtgcttctgtcattccatgaagagctaaagtgaagcaaagtgttgaaaaaga 474
             |||||||| || ||||||||||| |||||||| || || || || ||||| ||||| ||
Sbjct: 2943 cctaaaaggagcctctgtcattccgtgaagagccaaggtaaaacacagtgtcgaaaatga 2884

                                           
Query: 475  tcgctcccctcctgacagtcctctggtgtct 505
            ||  || || ||||| |||||||||||||||
Sbjct: 2883 tctttctccacctgaaagtcctctggtgtct 2853



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                        
Query: 569  taatctacgttgatgaacccactgatacctttctttcccaggtgctcattgaacagccat 628
            ||||| || ||||| |||||||| || |||||||| || |||||||| ||||||  ||| 
Sbjct: 2789 taatcaacattgataaacccacttatccctttcttccctaggtgctcgttgaacctccac 2730

                                                                
Query: 629  gtcaattgtcgcttcaaaaggccagcattcctctggaacttcttccatcgca 680
            || |  ||||||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 2729 gtaagctgtcgcttcaaaagagcagcatttctctgaaatttcttccatcgca 2678
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>gb|AY110723.1| Zea mays CL29579_1 mRNA sequence
          Length = 656

 Score =  117 bits (59), Expect = 5e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                       
Query: 234 gtcaaccgcgaggggcggccatttgctgcttcttgactcgatctccaggcttcaccatgc 293
           ||||||||||||| || |||||||||||||||||||  | ||| |||| |||||||||||
Sbjct: 542 gtcaaccgcgaggagcagccatttgctgcttcttgatcctatccccagccttcaccatgc 601

                                                                  
Query: 294 tgatatcatgcggtgttataagtacccattgtgacccttgtgcaacagcaaaatc 348
           |||||||||| || ||||||| || |||||| |||||||| || |||||||||||
Sbjct: 602 tgatatcatgaggggttataaatatccattgagacccttgggcgacagcaaaatc 656
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>ref|NM_125539.1| Arabidopsis thaliana MIM; ATP binding AT5G61460 (MIM) mRNA, complete
            cds
          Length = 3646

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 137/167 (82%)
 Strand = Plus / Minus

                                                                        
Query: 283  cttcaccatgctgatatcatgcggtgttataagtacccattgtgacccttgtgcaacagc 342
            ||||||||||||||||||||| || || || |  | ||| || || |||| | |||  ||
Sbjct: 3225 cttcaccatgctgatatcatgaggggtgatgaacatccactgcgatccttctccaattgc 3166

                                                                        
Query: 343  aaaatctaccaaggtgtccaagcttattttgcgactcactgcatccatgaatacatcaaa 402
            |||||| ||||  | ||||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct: 3165 aaaatccaccagtgcgtccaagctaattttccgactgactgcatccataaacacatcaaa 3106

                                                           
Query: 403  ctcatccatggctctaaaaggtgcttctgtcattccatgaagagcta 449
            ||||||||| |||| ||| || |||||||||||  | ||||||||||
Sbjct: 3105 ctcatccattgctcgaaacggggcttctgtcatctcgtgaagagcta 3059
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>gb|AF120933.1|AF120933 Arabidopsis thaliana SMC-like protein (MIM) mRNA, complete cds
          Length = 3695

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 137/167 (82%)
 Strand = Plus / Minus

                                                                        
Query: 283  cttcaccatgctgatatcatgcggtgttataagtacccattgtgacccttgtgcaacagc 342
            ||||||||||||||||||||| || || || |  | ||| || || |||| | |||  ||
Sbjct: 3219 cttcaccatgctgatatcatgaggggtgatgaacatccactgcgatccttctccaattgc 3160

                                                                        
Query: 343  aaaatctaccaaggtgtccaagcttattttgcgactcactgcatccatgaatacatcaaa 402
            |||||| ||||  | ||||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct: 3159 aaaatccaccagtgcgtccaagctaattttccgactgactgcatccataaacacatcaaa 3100

                                                           
Query: 403  ctcatccatggctctaaaaggtgcttctgtcattccatgaagagcta 449
            ||||||||| |||| ||| || |||||||||||  | ||||||||||
Sbjct: 3099 ctcatccattgctcgaaacggggcttctgtcatctcgtgaagagcta 3053
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                           
Query: 387     ccatgaatacatcaaactcatccatggctctaaaaggtgcttctgtcattccatgaagag 446
               |||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||
Sbjct: 1602587 ccatgaatacatcaaactcatccatggccctaaaaggagcctctgtcattccgtgaagag 1602528

                                             
Query: 447     ctaaagtgaagcaaagtgttgaaaaagatc 476
               | || || || || ||||| ||||| ||||
Sbjct: 1602527 ccaaggtaaaacacagtgtcgaaaatgatc 1602498



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                           
Query: 234     gtcaaccgcgaggggcggccatttgctgcttcttgactcgatctccaggcttcaccatgc 293
               |||||||||| ||||| |||||||||||||||||||  |  |||||||| | ||||||||
Sbjct: 1602919 gtcaaccgcgtggggcagccatttgctgcttcttgatcctgtctccaggttgcaccatgc 1602860

                  
Query: 294     tga 296
               |||
Sbjct: 1602859 tga 1602857



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                           
Query: 293     ctgatatcatgcggtgttataagtacccattgtgacccttgtgcaacagcaaaatctacc 352
               ||||||||||| |||||||||| || ||| ||||| ||||| |  || || |||||||| 
Sbjct: 1602767 ctgatatcatgtggtgttataaatatccactgtgatccttgcgtgacggcgaaatctact 1602708

                                                   
Query: 353     aaggtgtccaagcttattttgcgactcactgcatcc 388
               | |||||| | |||||| ||||| || |||||||||
Sbjct: 1602707 agggtgtctaggcttatcttgcggcttactgcatcc 1602672



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 635     tgtcgcttcaaaaggccagcattcctctggaacttcttccatcgca 680
               ||||||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 1601876 tgtcgcttcaaaagagcagcatttctctgaaatttcttccatcgca 1601831
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>dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0018I03
          Length = 145818

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                          
Query: 387    ccatgaatacatcaaactcatccatggctctaaaaggtgcttctgtcattccatgaagag 446
              |||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||
Sbjct: 130831 ccatgaatacatcaaactcatccatggccctaaaaggagcctctgtcattccgtgaagag 130772

                                            
Query: 447    ctaaagtgaagcaaagtgttgaaaaagatc 476
              | || || || || ||||| ||||| ||||
Sbjct: 130771 ccaaggtaaaacacagtgtcgaaaatgatc 130742



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                          
Query: 234    gtcaaccgcgaggggcggccatttgctgcttcttgactcgatctccaggcttcaccatgc 293
              |||||||||| ||||| |||||||||||||||||||  |  |||||||| | ||||||||
Sbjct: 131163 gtcaaccgcgtggggcagccatttgctgcttcttgatcctgtctccaggttgcaccatgc 131104

                 
Query: 294    tga 296
              |||
Sbjct: 131103 tga 131101



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                          
Query: 293    ctgatatcatgcggtgttataagtacccattgtgacccttgtgcaacagcaaaatctacc 352
              ||||||||||| |||||||||| || ||| ||||| ||||| |  || || |||||||| 
Sbjct: 131011 ctgatatcatgtggtgttataaatatccactgtgatccttgcgtgacggcgaaatctact 130952

                                                  
Query: 353    aaggtgtccaagcttattttgcgactcactgcatcc 388
              | |||||| | |||||| ||||| || |||||||||
Sbjct: 130951 agggtgtctaggcttatcttgcggcttactgcatcc 130916



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 635    tgtcgcttcaaaaggccagcattcctctggaacttcttccatcgca 680
              ||||||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 130120 tgtcgcttcaaaagagcagcatttctctgaaatttcttccatcgca 130075
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>gb|AC149268.21| Medicago truncatula clone mth2-94j16, complete sequence
          Length = 146810

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 395   acatcaaactcatccatggctctaaaaggtgcttctgtcattccatgaagagctaaagtg 454
             |||||||| |||||||| |||||||| || || || |||||| ||||||| ||||| |  
Sbjct: 11355 acatcaaattcatccattgctctaaatggggcctccgtcatttcatgaagggctaatgca 11296

                                          
Query: 455   aagcaaagtgttgaaaaagatcgctcccc 483
             ||||| |  ||||||||||| ||||||||
Sbjct: 11295 aagcacaaagttgaaaaagagcgctcccc 11267
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>gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete sequence
          Length = 133085

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                         
Query: 395   acatcaaactcatccatggctctaaaaggtgcttctgtcattccatgaagagctaaagtg 454
             |||||||| |||||||| |||||||| || || || |||||| ||||||| ||||| |  
Sbjct: 36376 acatcaaattcatccattgctctaaatggggcctccgtcatttcatgaagggctaatgca 36435

                                          
Query: 455   aagcaaagtgttgaaaaagatcgctcccc 483
             ||||| |  ||||||||||| ||||||||
Sbjct: 36436 aagcacaaagttgaaaaagagcgctcccc 36464
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>dbj|AB016887.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCI2
          Length = 15607

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 395  acatcaaactcatccatggctctaaaaggtgcttctgtcattccatgaagagcta 449
            ||||||||||||||||| |||| ||| || |||||||||||  | ||||||||||
Sbjct: 5073 acatcaaactcatccattgctcgaaacggggcttctgtcatctcgtgaagagcta 5127
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>gb|AF120932.1|AF120932 Arabidopsis thaliana SMC-like protein (MIM) gene, complete cds
          Length = 10156

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 395   acatcaaactcatccatggctctaaaaggtgcttctgtcattccatgaagagcta 449
             ||||||||||||||||| |||| ||| || |||||||||||  | ||||||||||
Sbjct: 10132 acatcaaactcatccattgctcgaaacggggcttctgtcatctcgtgaagagcta 10078



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 395  acatcaaactcatccatggctctaaaaggtgcttctgtcattccatgaagagcta 449
            ||||||||||||||||| |||| ||| || |||||||||||  | ||||||||||
Sbjct: 8488 acatcaaactcatccattgctcgaaacggggcttctgtcatctcgtgaagagcta 8434
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>ref|NM_120848.1| Arabidopsis thaliana ATP binding AT5G07660 mRNA, complete cds
          Length = 3177

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 95/119 (79%)
 Strand = Plus / Minus

                                                                        
Query: 380  actgcatccatgaatacatcaaactcatccatggctctaaaaggtgcttctgtcattcca 439
            ||||| ||||| || ||||||||||| ||||| |||| ||  || ||||| |||||    
Sbjct: 3032 actgcgtccataaacacatcaaactcgtccattgctcgaattggggcttcagtcatattc 2973

                                                                       
Query: 440  tgaagagctaaagtgaagcaaagtgttgaaaaagatcgctcccctcctgacagtcctct 498
            ||||||||||| |||||||| |  || || ||||| || ||||| ||||| ||||||||
Sbjct: 2972 tgaagagctaatgtgaagcataaagtcgagaaagaccgttccccacctgaaagtcctct 2914



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 587  ccactgatacctttctttcc 606
            ||||||||||||||||||||
Sbjct: 2825 ccactgatacctttctttcc 2806
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>gb|AC074289.6| Homo sapiens BAC clone RP11-207O24 from 2, complete sequence
          Length = 92346

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 39    caagagattctgtcaaaggtgg 60
             ||||||||||||||||||||||
Sbjct: 75532 caagagattctgtcaaaggtgg 75553
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>gb|AC162892.7| Mus musculus chromosome 5, clone RP23-257D19, complete sequence
          Length = 155647

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 423   gtgcttctgtcattccatgaa 443
             |||||||||||||||||||||
Sbjct: 32485 gtgcttctgtcattccatgaa 32505
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>gb|AC132303.3| Mus musculus BAC clone RP24-281P9 from chromosome 19, complete sequence
          Length = 177097

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 649    gccagcattcctctggaactt 669
              |||||||||||||||||||||
Sbjct: 150412 gccagcattcctctggaactt 150392
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>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete
             sequence
          Length = 190119

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   gtggaccctgaggctaggaga 191
             |||||||||||||||||||||
Sbjct: 95475 gtggaccctgaggctaggaga 95495



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    gtggaccctgaggctaggaga 77
             |||||||||||||||||||||
Sbjct: 95475 gtggaccctgaggctaggaga 95495
to top
>gb|AC112271.4| Mus musculus BAC clone RP24-121H20 from chromosome 19, complete
             sequence
          Length = 170681

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 649   gccagcattcctctggaactt 669
             |||||||||||||||||||||
Sbjct: 64157 gccagcattcctctggaactt 64137
to top
>ref|XM_645549.1| Entamoeba histolytica HM-1:IMSS structural maintenance of chromosomes
            protein (206.t00004) partial mRNA
          Length = 3072

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 395  acatcaaactcatccatggctctaaaagg 423
            |||||||| |||||||| |||||||||||
Sbjct: 2909 acatcaaattcatccattgctctaaaagg 2881
to top
>ref|XM_648722.1| Entamoeba histolytica HM-1:IMSS structural maintenance of chromosomes
            protein (71.t00027) partial mRNA
          Length = 3072

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 395  acatcaaactcatccatggctctaaaagg 423
            |||||||| |||||||| |||||||||||
Sbjct: 2900 acatcaaattcatccattgctctaaaagg 2872
to top
>ref|XM_789727.1| PREDICTED: Strongylocentrotus purpuratus similar to SMC6 protein
            (LOC590110), mRNA
          Length = 1512

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 386  tccatgaatacatcaaactcatccatggc 414
            |||||||| |||||||| |||||||||||
Sbjct: 1295 tccatgaaaacatcaaattcatccatggc 1267
to top
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
              DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 386    tccatgaatacatcaaactcatcca 410
              |||||||| ||||||||||||||||
Sbjct: 118608 tccatgaacacatcaaactcatcca 118584
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 229    cctgagtcaaccgcgaggggcggcc 253
              |||| ||||||||||||||||||||
Sbjct: 976424 cctgcgtcaaccgcgaggggcggcc 976400
to top
>gb|AC159262.3| Mus musculus BAC clone RP24-82I20 from chromosome 8, complete sequence
          Length = 235024

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 649    gccagcattcctctggaactt 669
              |||||||||||||||||||||
Sbjct: 187481 gccagcattcctctggaactt 187501
to top
>gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete sequence
          Length = 237167

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 649    gccagcattcctctggaactt 669
              |||||||||||||||||||||
Sbjct: 187068 gccagcattcctctggaactt 187048
to top
>emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in linkage group 18,
             complete sequence
          Length = 263615

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 544   ctcaacagacaaaactttact 564
             |||||||||||||||||||||
Sbjct: 32238 ctcaacagacaaaactttact 32218
to top
>emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on chromosome 4, complete
              sequence
          Length = 157168

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 649    gccagcattcctctggaactt 669
              |||||||||||||||||||||
Sbjct: 114668 gccagcattcctctggaactt 114688
to top
>gb|AC161802.7| Mus musculus chromosome 5, clone RP23-477G6, complete sequence
          Length = 176484

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 423   gtgcttctgtcattccatgaa 443
             |||||||||||||||||||||
Sbjct: 21254 gtgcttctgtcattccatgaa 21234
to top
>gb|AF348085.1| Danio rerio focal adhesion kinase 1a (fak1a) mRNA, complete cds
          Length = 3895

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 658  cctctggaacttcttccatc 677
            ||||||||||||||||||||
Sbjct: 2738 cctctggaacttcttccatc 2719
to top
>gb|AF313879.1| Uncultured methanogen RS-ME47 methyl-coenzyme M reductase subunit A
           (mcrA) gene, partial cds
          Length = 716

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 391 aggtgcttctgtcattccat 372
to top
>gb|AF313864.1| Uncultured methanogen RS-ME29 methyl-coenzyme M reductase subunit A
           (mcrA) gene, partial cds
          Length = 719

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 391 aggtgcttctgtcattccat 372
to top
>gb|AF313815.1| Uncultured methanogen RS-MCR09 methyl-coenzyme M reductase subunit
           A (mcrA) gene, partial cds
          Length = 469

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 133 aggtgcttctgtcattccat 114
to top
>gb|AY350715.1| Arabidopsis arenosa clone BAC Aer1B10, complete sequence
          Length = 78945

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   ccactgatacctttctttcc 606
             ||||||||||||||||||||
Sbjct: 67108 ccactgatacctttctttcc 67089
to top
>gb|AY350712.1| Arabidopsis arenosa clone BAC Aer6D24, complete sequence
          Length = 87863

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   ccactgatacctttctttcc 606
             ||||||||||||||||||||
Sbjct: 56288 ccactgatacctttctttcc 56269
to top
>gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete sequence
          Length = 185995

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 281    ggcttcaccatgctgatatcatgc 304
              ||||||||||||||| ||||||||
Sbjct: 102207 ggcttcaccatgctgctatcatgc 102184
to top
>emb|AL513215.7| Human DNA sequence from clone RP11-530P14 on chromosome 6, complete
             sequence
          Length = 43320

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   ttcaccatgctgatatcatg 303
             ||||||||||||||||||||
Sbjct: 20473 ttcaccatgctgatatcatg 20454
to top
>emb|AL157932.21| Human DNA sequence from clone RP11-187A9 on chromosome 13 Contains part
             of a novel gene, the 5' end of the DGKH gene for
             diacylglycerol kinase eta, a mitogen-activated protein
             kinase 6 (MAPK6) pseudogene and 2 CpG islands, complete
             sequence
          Length = 67309

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 645   aaaggccagcattcctctgg 664
             ||||||||||||||||||||
Sbjct: 14259 aaaggccagcattcctctgg 14240
to top
>emb|AL031177.1|HS889N15 Human DNA sequence from clone RP5-889N15 on chromosome Xq22.1-22.3
             Contains the 3' end of a novel gene (MGC44287), the PSMD10
             gene for proteasome (prosome, macropain) 26S subunit,
             non-ATPase, 10 (p28), the AUTL2 gene for AUT-like 2,
             cysteine endopeptidase (S. cerevisiae) (APG4A, MGC43691),
             the 3' end of the COL4A6 gene for collagen, type IV, alpha
             6 and a CpG island, complete sequence
          Length = 123395

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   aacagacaaaactttactct 566
             ||||||||||||||||||||
Sbjct: 36616 aacagacaaaactttactct 36635
to top
>gb|AY125672.1| Uncultured Methanobacteriaceae archaeon MRR-mcr74 methyl-coenzyme M
           reductase subunit A (mcrA) gene, partial cds
          Length = 478

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 150 aggtgcttctgtcattccat 131
to top
>gb|AY125663.1| Uncultured Methanobacteriaceae archaeon MRR-mcr66 methyl-coenzyme M
           reductase II alpha subunit (mrtA) gene, partial cds
          Length = 486

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 133 aggtgcttctgtcattccat 114
to top
>gb|AY125645.1| Uncultured Methanobacteriaceae archaeon MRR-mcr5 methyl-coenzyme M
           reductase II alpha subunit (mrtA) gene, partial cds
          Length = 489

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 136 aggtgcttctgtcattccat 117
to top
>gb|AY125644.1| Uncultured Methanobacteriaceae archaeon MRR-mcr49 methyl-coenzyme M
           reductase II alpha subunit (mrtA) gene, partial cds
          Length = 503

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 150 aggtgcttctgtcattccat 131
to top
>gb|AY125642.1| Uncultured Methanobacteriaceae archaeon MRR-mcr47 methyl-coenzyme M
           reductase subunit A (mcrA) gene, partial cds
          Length = 494

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 150 aggtgcttctgtcattccat 131
to top
>gb|AY125641.1| Uncultured Methanobacteriaceae archaeon MRR-mcr46 methyl-coenzyme M
           reductase subunit A (mcrA) gene, partial cds
          Length = 493

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 140 aggtgcttctgtcattccat 121
to top
>gb|AY125639.1| Uncultured Methanobacteriaceae archaeon MRR-mcr44 methyl-coenzyme M
           reductase subunit A (mcrA) gene, partial cds
          Length = 486

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 150 aggtgcttctgtcattccat 131
to top
>gb|AY125635.1| Uncultured Methanobacteriaceae archaeon MRR-mcr40 methyl-coenzyme M
           reductase II alpha subunit (mrtA) gene, partial cds
          Length = 486

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 133 aggtgcttctgtcattccat 114
to top
>gb|AY125630.1| Uncultured Methanobacteriaceae archaeon MRR-mcr36 methyl-coenzyme M
           reductase II alpha subunit (mrtA) gene, partial cds
          Length = 503

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 150 aggtgcttctgtcattccat 131
to top
>gb|AY125624.1| Uncultured Methanobacteriaceae archaeon MRR-mcr30 methyl-coenzyme M
           reductase II alpha subunit (mrtA) gene, partial cds
          Length = 486

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 133 aggtgcttctgtcattccat 114
to top
>gb|AY125623.1| Uncultured Methanobacteriaceae archaeon MRR-mcr3 methyl-coenzyme M
           reductase II alpha subunit (mrtA) gene, partial cds
          Length = 503

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 aggtgcttctgtcattccat 440
           ||||||||||||||||||||
Sbjct: 150 aggtgcttctgtcattccat 131
to top
>emb|X62302.1|MMEZGL Mouse embryonic zeta-globin gene
          Length = 1962

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 326 gacccttgtgcaacagcaaa 345
           ||||||||||||||||||||
Sbjct: 949 gacccttgtgcaacagcaaa 968
to top
>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5
          Length = 281723

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    ttgtgacccttgtgcaacag 341
              ||||||||||||||||||||
Sbjct: 167490 ttgtgacccttgtgcaacag 167509
to top
>emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on chromosome 11, complete
             sequence
          Length = 198743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 532   aggcatggtcagctcaacag 551
             ||||||||||||||||||||
Sbjct: 72214 aggcatggtcagctcaacag 72233
to top
>gb|AC091683.53| Mus musculus strain C57BL/6J clone rp23-155l11 map 13, complete sequence
          Length = 236314

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    ctccaggcttcaccatgctg 295
              ||||||||||||||||||||
Sbjct: 225820 ctccaggcttcaccatgctg 225801
to top
>ref|NM_134496.2| Drosophila melanogaster CG14215-RA (CG14215), mRNA
          Length = 6651

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  gcttcttgactcgatctcca 280
            ||||||||||||||||||||
Sbjct: 3863 gcttcttgactcgatctcca 3844
to top
>gb|AY058601.1| Drosophila melanogaster LD29239 full length cDNA
          Length = 3687

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 gcttcttgactcgatctcca 280
           ||||||||||||||||||||
Sbjct: 885 gcttcttgactcgatctcca 866
to top
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 385    atccatgaatacatcaaactcatc 408
              |||||| |||||||||||||||||
Sbjct: 717480 atccataaatacatcaaactcatc 717457
to top
>gb|AF271755.1|AF271755 Pseudosciadium balansae maturase (matK) gene, partial cds;
           chloroplast gene for chloroplast product
          Length = 1038

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 818 tcaattgtcgcttcaaaagg 837
to top
>gb|AF271754.1|AF271754 Myodocarpus simplicifolius maturase (matK) gene, partial cds;
           chloroplast gene for chloroplast product
          Length = 1074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 841 tcaattgtcgcttcaaaagg 860
to top
>gb|AF271753.1|AF271753 Myodocarpus gracilis maturase (matK) gene, partial cds; chloroplast
           gene for chloroplast product
          Length = 1074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 841 tcaattgtcgcttcaaaagg 860
to top
>gb|AF271750.1|AF271750 Myodocarpus crassifolius maturase (matK) gene, partial cds;
           chloroplast gene for chloroplast product
          Length = 1074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 841 tcaattgtcgcttcaaaagg 860
to top
>gb|AF271749.1|AF271749 Myodocarpus involucratus maturase (matK) gene, partial cds;
           chloroplast gene for chloroplast product
          Length = 1000

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 767 tcaattgtcgcttcaaaagg 786
to top
>gb|AF271748.1|AF271748 Myodocarpus lanceolatus maturase (matK) gene, partial cds;
           chloroplast gene for chloroplast product
          Length = 1074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 841 tcaattgtcgcttcaaaagg 860
to top
>gb|AF271747.1|AF271747 Myodocarpus fraxinifolius maturase (matK) gene, partial cds;
           chloroplast gene for chloroplast product
          Length = 1074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 841 tcaattgtcgcttcaaaagg 860
to top
>gb|AF271745.1|AF271745 Delarbrea montana maturase (matK) gene, partial cds; chloroplast
           gene for chloroplast product
          Length = 1028

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 795 tcaattgtcgcttcaaaagg 814
to top
>gb|AF271743.1|AF271743 Delarbrea collina maturase (matK) gene, partial cds; chloroplast
           gene for chloroplast product
          Length = 1074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 841 tcaattgtcgcttcaaaagg 860
to top
>gb|AF271742.1|AF271742 Delarbrea paradoxa maturase (matK) gene, partial cds; chloroplast
           gene for chloroplast product
          Length = 1046

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 818 tcaattgtcgcttcaaaagg 837
to top
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone
             BACR33M08, complete sequence
          Length = 180263

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gcttcttgactcgatctcca 280
             ||||||||||||||||||||
Sbjct: 53626 gcttcttgactcgatctcca 53607
to top
>gb|AC114792.4| Homo sapiens BAC clone RP11-658J5 from 2, complete sequence
          Length = 32363

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aggtggaccctgaggctagg 74
             ||||||||||||||||||||
Sbjct: 24241 aggtggaccctgaggctagg 24222



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   aggtggaccctgaggctagg 188
             ||||||||||||||||||||
Sbjct: 24241 aggtggaccctgaggctagg 24222
to top
>gb|AC084525.1|CBRG21D12 Caenorhabditis briggsae cosmid G21D12, complete sequence
          Length = 38569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 385   atccatgaatacatcaaactcatc 408
             ||||||||| ||||||||||||||
Sbjct: 35807 atccatgaagacatcaaactcatc 35784
to top
>gb|AC093570.30| Mus musculus strain C57BL/6J chromosome 5 clone rp23-115a12, complete
             sequence
          Length = 203838

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 649   gccagcattcctctggaacttctt 672
             |||||||||||||||| |||||||
Sbjct: 88243 gccagcattcctctgggacttctt 88220
to top
>emb|BX119985.7| Zebrafish DNA sequence from clone CH211-270B10 in linkage group 11,
              complete sequence
          Length = 172959

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    aagagctaaagtgaagcaaa 461
              ||||||||||||||||||||
Sbjct: 103279 aagagctaaagtgaagcaaa 103298
to top
>dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK20
          Length = 78172

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   ccactgatacctttctttcc 606
             ||||||||||||||||||||
Sbjct: 29394 ccactgatacctttctttcc 29375
to top
>ref|NM_210258.1| Eremothecium gossypii AER044Wp (AER044W), mRNA
          Length = 3312

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 385  atccatgaatacatcaaactcatc 408
            |||||| |||||||||||||||||
Sbjct: 3126 atccataaatacatcaaactcatc 3103
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    gcttcttgactcgatctcca 280
              ||||||||||||||||||||
Sbjct: 303539 gcttcttgactcgatctcca 303520
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>gb|AC110211.16| Mus musculus chromosome 15, clone RP23-192B21, complete sequence
          Length = 202844

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 639   gcttcaaaaggccagcattc 658
             ||||||||||||||||||||
Sbjct: 29347 gcttcaaaaggccagcattc 29366
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>gb|AC125070.4| Mus musculus BAC clone RP23-443A7 from 13, complete sequence
          Length = 208344

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    ctccaggcttcaccatgctg 295
              ||||||||||||||||||||
Sbjct: 130830 ctccaggcttcaccatgctg 130849
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>gb|U58608.1|DMU58608 Delarbrea michieana maturase (matK) gene, chloroplast gene encoding
           chloroplast protein, partial cds
          Length = 1074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 630 tcaattgtcgcttcaaaagg 649
           ||||||||||||||||||||
Sbjct: 841 tcaattgtcgcttcaaaagg 860
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>ref|NM_131796.1| Danio rerio protein tyrosine kinase 2.1 (ptk2.1), mRNA
          Length = 3895

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 658  cctctggaacttcttccatc 677
            ||||||||||||||||||||
Sbjct: 2738 cctctggaacttcttccatc 2719


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,467,483
Number of Sequences: 3902068
Number of extensions: 5467483
Number of successful extensions: 97325
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 97136
Number of HSP's gapped (non-prelim): 188
length of query: 683
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 660
effective length of database: 17,143,297,704
effective search space: 11314576484640
effective search space used: 11314576484640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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