ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34k13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY273920.1| Hordeum vulgare subsp. vulgare putative cyclic nu... 1082 0.0
2ref|XM_468036.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
3dbj|AK100497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
4gb|AY111095.1| Zea mays CL19485_1 mRNA sequence 319 6e-84
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
6dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
7dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
9dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
10dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
11gb|AC016550.6| Homo sapiens chromosome 5 clone CTC-261N6, comple... 48 0.032
12emb|AL356269.10| Human DNA sequence from clone RP11-420J12 on ch... 44 0.50
13gb|AC118290.7| Rattus norvegicus 2 BAC CH230-366D18 (Children's ... 44 0.50
14emb|CR381704.5| Zebrafish DNA sequence from clone CH211-202F6 in... 44 0.50
15emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 i... 44 0.50
16gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, compl... 44 0.50
17emb|BX004830.7| Zebrafish DNA sequence from clone CH211-159I8 in... 44 0.50
18gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, comple... 44 0.50
19gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, comple... 44 0.50
20gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M... 44 0.50
21ref|XM_822750.1| Trypanosoma brucei TREU927 hypothetical protein... 42 2.0
22gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete se... 42 2.0
23gb|AC105026.4| Homo sapiens chromosome 8, clone CTD-2152D24, com... 42 2.0
24gb|AC013724.8| Homo sapiens BAC clone RP11-319E12 from 4, comple... 42 2.0
25gb|AC012364.7| Homo sapiens BAC clone RP11-444D15 from 2, comple... 42 2.0
26emb|AL121655.1|CNS01DS5 BAC sequence from the SPG4 candidate reg... 42 2.0
27gb|AC170423.1| Rhesus Macaque BAC CH250-107D17 (Children's Hosp... 40 7.9
28ref|NM_014350.1| Homo sapiens tumor necrosis factor, alpha-induc... 40 7.9
29gb|BC007014.1| Homo sapiens tumor necrosis factor, alpha-induced... 40 7.9
30gb|BC005352.1| Homo sapiens tumor necrosis factor, alpha-induced... 40 7.9
31gb|AC073208.4| Homo sapiens BAC clone RP11-418B19 from 7, comple... 40 7.9
32emb|CR956355.2| Pan troglodytes chromosome X BAC RP43-051D20, co... 40 7.9
33gb|AC127268.2| Mus musculus BAC clone RP23-426K20 from chromosom... 40 7.9
34gb|AC146048.3| Pan troglodytes BAC clone RP43-44J1 from 7, compl... 40 7.9
35gb|AC069286.7| Homo sapiens BAC clone RP11-261N10 from 7, comple... 40 7.9
36gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, com... 40 7.9
37emb|AL391841.17| Human DNA sequence from clone RP11-123G14 on ch... 40 7.9
38emb|AL392173.8| Human DNA sequence from clone RP11-158M9 on chro... 40 7.9
39emb|AL139401.14| Human DNA sequence from clone RP5-1154A22 on ch... 40 7.9
40emb|AL139333.10| Human DNA sequence from clone RP11-536I19 on ch... 40 7.9
41gb|AC044873.13| Homo sapiens chromosome 18, clone RP11-715C4, co... 40 7.9
42emb|AL121903.13|HSDJ155G6 Human DNA sequence from clone RP1-155G... 40 7.9
43emb|AL034582.11|HS594I10 Human DNA sequence from clone RP4-594I1... 40 7.9
44emb|AL022397.1|HS11C7 Human DNA sequence from clone CTA-11C7 on ... 40 7.9
45gb|U50184.1| Caenorhabditis elegans cosmid W03A3, complete sequence 40 7.9
46emb|BX465841.9| Zebrafish DNA sequence from clone CH211-198K5 in... 40 7.9
47emb|CR615621.1| full-length cDNA clone CS0DC024YA23 of Neuroblas... 40 7.9
48gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, comp... 40 7.9
49dbj|AK222439.1| Ciona intestinalis mRNA for zinc finger protein,... 40 7.9
50emb|CR753829.1| Human DNA sequence from clone XX-NCIH2171_14G18,... 40 7.9
51dbj|AK097884.1| Homo sapiens cDNA FLJ40565 fis, clone THYMU20046... 40 7.9
52emb|CR615131.1| full-length cDNA clone CS0DI081YO11 of Placenta ... 40 7.9
53dbj|AK097284.1| Homo sapiens cDNA FLJ39965 fis, clone SPLEN20271... 40 7.9
54emb|CR611795.1| full-length cDNA clone CS0DI057YA07 of Placenta ... 40 7.9
55dbj|AK001931.1| Homo sapiens cDNA FLJ11069 fis, clone PLACE10049... 40 7.9
56dbj|AK001850.1| Homo sapiens cDNA FLJ10988 fis, clone PLACE10019... 40 7.9
57gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Ca... 40 7.9
58gb|AC090214.3| Homo sapiens chromosome 18, clone RP11-800G9, com... 40 7.9
59gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, co... 40 7.9
60gb|AC093896.3| Homo sapiens BAC clone RP11-719N9 from 4, complet... 40 7.9
61gb|AC026702.6| Homo sapiens chromosome 5 clone CTC-575I10, compl... 40 7.9
62gb|AC022733.8| Homo sapiens chromosome 8, clone RP11-470M17, com... 40 7.9
63gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence 40 7.9
64gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence 40 7.9
65gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, comple... 40 7.9
66gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, comp... 40 7.9
67gb|AC026421.4| Homo sapiens chromosome 5 clone CTD-2127O16, comp... 40 7.9
68gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-13... 40 7.9
69gb|AC035144.3|AC035144 Homo sapiens chromosome 5 clone CTD-2220M... 40 7.9
70gb|AC011443.6|AC011443 Homo sapiens chromosome 19 clone CTC-218B... 40 7.9
71gb|AC116172.2| Homo sapiens BAC clone RP11-24L21 from 4, complet... 40 7.9
72gb|AC129946.9| Mus musculus chromosome 5, clone RP24-512F21, com... 40 7.9
73gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, comp... 40 7.9
74gb|AE004441.1| Pseudomonas aeruginosa PAO1, section 2 of 529 of ... 40 7.9
75gb|AC013716.6| Homo sapiens BAC clone RP11-22L19 from 2, complet... 40 7.9
76gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, comple... 40 7.9
77gb|AC010605.4|AC010605 Homo sapiens chromosome 19 clone CTB-189B... 40 7.9
78gb|AF098934.1|AF098934 Homo sapiens head and neck tumor and meta... 40 7.9
79gb|AF073952.1|AF073952 Pseudomonas aeruginosa methionyl-tRNA for... 40 7.9
80gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15... 40 7.9
81gb|AF070671.1|AF070671 Homo sapiens TNF-induced protein GG2-1 mR... 40 7.9
82gb|AF053645.1|HSCSE1G3 Homo sapiens cellular apoptosis susceptib... 40 7.9
83emb|AL355886.4|CNS05TCX Human chromosome 14 DNA sequence BAC R-3... 40 7.9
84dbj|AP001831.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.9
85gb|AF099936.1|AF099936 Homo sapiens MDC-3.13 isoform 1 mRNA, com... 40 7.9
86gb|AF099935.1|AF099935 Homo sapiens MDC-3.13 isoform 2 mRNA, com... 40 7.9
87emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chro... 40 7.9 
>gb|AY273920.1| Hordeum vulgare subsp. vulgare putative cyclic nucleotide and
           calmodulin-regulated ion channel protein mRNA, partial
           cds
          Length = 767

 Score = 1082 bits (546), Expect = 0.0
 Identities = 567/572 (99%), Gaps = 2/572 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aactgttaaccnatagttagtactacctacttgggcagactgtcaccccctctgtccagg 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aactgttaaccaatagttagtactacctacttgggcagactgtcaccccctctgtccagg 530

                                                                       
Query: 61  ctgaaaggcataatgagaccgtgtatccggtaaacattcgtgttcttcactcggccttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctgaaaggcataatgagaccgtgtatccggtaaacattcgtgttcttcactcggccttga 470

                                                                       
Query: 121 tctttcagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tctttcagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgc 410

                                                                       
Query: 181 agcgatggtcctccagtagggtgattcatacctgattgccccctgcactcttggattgcg 240
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agcaatggtcctccagtagggtgattcatacctgattgccccctgcactcttggattgcg 350

                                                                       
Query: 241 caagaaccgtgcaaattgtgcagtaacttgttcaagatcacttgctctaagtacaaaagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caagaaccgtgcaaattgtgcagtaacttgttcaagatcacttgctctaagtacaaaagc 290

                                                                       
Query: 301 ttcaacattcgttaagcatcgcacagtacgtatagcaaccaaacgcataccatgaaatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ttcaacattcgttaagcatcgcacagtacgtatagcaaccaaacgcataccatgaaatct 230

                                                                       
Query: 361 acttttcccgccatctttattcgttgaagagtgttccaagtaccatgtgaggagttcctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acttttcccgccatctttattcgttgaagagtgttccaagtaccatgtgaggagttcctc 170

                                                                       
Query: 421 tccacatacatctccatcttgtaatggagccctgcttccatctgcactgatgctttctag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tccacatacatctccatcttgtaatggagccctgcttccatctgcactgatgctttctag 110

                                                                       
Query: 481 cttgcctctaactatgaagatcattttgncgacagggccacccttgataaagaatgtcac 540
           |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 109 cttgcctctaactatgaagatcattttgtcgacagggcca-ccttgataaagaatgtcac 51

                                           
Query: 541 ttccactgatatataaatttctgtcttaattt 572
           |||||||||||||||||||| |||||||||||
Sbjct: 50  ttccactgatatataaattt-tgtcttaattt 20
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>ref|XM_468036.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2683

 Score =  391 bits (197), Expect = e-105
 Identities = 371/428 (86%), Gaps = 1/428 (0%)
 Strand = Plus / Minus

                                                                        
Query: 126  cagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcga 185
            |||||||||| | ||| || || |||||||||||||||||||| || |||| |||||| |
Sbjct: 2371 cagctcgcttcaatcgcctattccgatacctccatgcgacttgaatacgcgttgcagcaa 2312

                                                                        
Query: 186  tggtcctccagtagggtgattcatacctgattgccccctgcactcttggattgcgcaaga 245
            |||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||
Sbjct: 2311 tggttctccagtagggtgactcatacctgattgcaccctgcactcgtggattgcgcaaga 2252

                                                                        
Query: 246  accgtgcaaattgtgcagtaacttgttcaagatcacttgctctaagtacaaaagcttcaa 305
            | |||| |||||||| ||| |||| ||| ||||| ||||| || ||||||||||||||||
Sbjct: 2251 atcgtgaaaattgtgaagttacttcttcgagatcgcttgcccttagtacaaaagcttcaa 2192

                                                                        
Query: 306  cattcgttaagcatcgcacagtacgtatagcaaccaaacgcataccatgaaatctacttt 365
            |||| ||||| ||||  |||||||| ||||||||||||||||||||||| |||||  || 
Sbjct: 2191 catttgttaaacatcttacagtacgaatagcaaccaaacgcataccatggaatctcattc 2132

                                                                        
Query: 366  tcccgccatctttattcgttgaagagtgttccaagtaccatgtgaggagttcctctccac 425
            |||| |||||| | || | |||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 2131 tcccaccatctctgttagctgaagagtgttccaagtaccatgtcaggagctcctctccac 2072

                                                                        
Query: 426  atacatctccatcttgtaatggagccctgcttccatctgcactgatgctttctagcttgc 485
            ||||||| || || ||||| |||||  ||||||||||||||||||||||||||||||| |
Sbjct: 2071 atacatcaccttcatgtaacggagctttgcttccatctgcactgatgctttctagctttc 2012

                                                                        
Query: 486  ctctaactatgaagatcattttgncgacagggccacccttgataaagaatgtcacttcca 545
            | || |||||||||| ||||||  | || || ||| ||||||||||| ||||||||||| 
Sbjct: 2011 ccctcactatgaagaccattttttcaactggacca-ccttgataaaggatgtcacttccg 1953

                    
Query: 546  ctgatata 553
            || |||||
Sbjct: 1952 ctaatata 1945
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>dbj|AK100497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D19, full
            insert sequence
          Length = 2682

 Score =  391 bits (197), Expect = e-105
 Identities = 371/428 (86%), Gaps = 1/428 (0%)
 Strand = Plus / Minus

                                                                        
Query: 126  cagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcga 185
            |||||||||| | ||| || || |||||||||||||||||||| || |||| |||||| |
Sbjct: 2371 cagctcgcttcaatcgcctattccgatacctccatgcgacttgaatacgcgttgcagcaa 2312

                                                                        
Query: 186  tggtcctccagtagggtgattcatacctgattgccccctgcactcttggattgcgcaaga 245
            |||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||
Sbjct: 2311 tggttctccagtagggtgactcatacctgattgcaccctgcactcgtggattgcgcaaga 2252

                                                                        
Query: 246  accgtgcaaattgtgcagtaacttgttcaagatcacttgctctaagtacaaaagcttcaa 305
            | |||| |||||||| ||| |||| ||| ||||| ||||| || ||||||||||||||||
Sbjct: 2251 atcgtgaaaattgtgaagttacttcttcgagatcgcttgcccttagtacaaaagcttcaa 2192

                                                                        
Query: 306  cattcgttaagcatcgcacagtacgtatagcaaccaaacgcataccatgaaatctacttt 365
            |||| ||||| ||||  |||||||| ||||||||||||||||||||||| |||||  || 
Sbjct: 2191 catttgttaaacatcttacagtacgaatagcaaccaaacgcataccatggaatctcattc 2132

                                                                        
Query: 366  tcccgccatctttattcgttgaagagtgttccaagtaccatgtgaggagttcctctccac 425
            |||| |||||| | || | |||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 2131 tcccaccatctctgttagctgaagagtgttccaagtaccatgtcaggagctcctctccac 2072

                                                                        
Query: 426  atacatctccatcttgtaatggagccctgcttccatctgcactgatgctttctagcttgc 485
            ||||||| || || ||||| |||||  ||||||||||||||||||||||||||||||| |
Sbjct: 2071 atacatcaccttcatgtaacggagctttgcttccatctgcactgatgctttctagctttc 2012

                                                                        
Query: 486  ctctaactatgaagatcattttgncgacagggccacccttgataaagaatgtcacttcca 545
            | || |||||||||| ||||||  | || || ||| ||||||||||| ||||||||||| 
Sbjct: 2011 ccctcactatgaagaccattttttcaactggacca-ccttgataaaggatgtcacttccg 1953

                    
Query: 546  ctgatata 553
            || |||||
Sbjct: 1952 ctaatata 1945
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>gb|AY111095.1| Zea mays CL19485_1 mRNA sequence
          Length = 626

 Score =  319 bits (161), Expect = 6e-84
 Identities = 321/376 (85%)
 Strand = Plus / Plus

                                                                       
Query: 125 tcagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcg 184
           ||||||||||| || || || ||||||||||||||||| || || || || | |||||| 
Sbjct: 231 tcagctcgcttcagccgccttttacgatacctccatgcaacctgaatacgagttgcagca 290

                                                                       
Query: 185 atggtcctccagtagggtgattcatacctgattgccccctgcactcttggattgcgcaag 244
           ||||| | ||||||     ||||||||||||| || |||||||||| |||||| |||| |
Sbjct: 291 atggttcgccagtannnnnattcatacctgatcgctccctgcactcgtggattacgcagg 350

                                                                       
Query: 245 aaccgtgcaaattgtgcagtaacttgttcaagatcacttgctctaagtacaaaagcttca 304
           || || ||||| || |  || |||| ||| |||||||||||||| |||||||||||||||
Sbjct: 351 aatcgagcaaactgcgaggtgacttcttccagatcacttgctctgagtacaaaagcttca 410

                                                                       
Query: 305 acattcgttaagcatcgcacagtacgtatagcaaccaaacgcataccatgaaatctactt 364
           ||||| ||||| ||||  || ||||||||||||||||| |||||||| || ||| || ||
Sbjct: 411 acatttgttaaacatcttactgtacgtatagcaaccaaccgcataccttggaatttaatt 470

                                                                       
Query: 365 ttcccgccatctttattcgttgaagagtgttccaagtaccatgtgaggagttcctctcca 424
           ||||| |||||| | |||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 471 ttcccaccatctctgttcgctgaagagtgttccaagtaccacgtgaggagctcctctcca 530

                                                                       
Query: 425 catacatctccatcttgtaatggagccctgcttccatctgcactgatgctttctagcttg 484
           |||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||| 
Sbjct: 531 catacatctccatcatgtaatggagccttgctgccatctgcactgatgctttccagcttc 590

                           
Query: 485 cctctaactatgaaga 500
           ||||| ||||||||||
Sbjct: 591 cctctcactatgaaga 606
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                            
Query: 210      acctgattgccccctgcactcttggattgcgcaagaaccgtgcaaattgtgcagtaactt 269
                |||||||||| |||||||||| ||||||||||||||| |||| |||||||| ||| ||||
Sbjct: 32677538 acctgattgcaccctgcactcgtggattgcgcaagaatcgtgaaaattgtgaagttactt 32677479

                                                                            
Query: 270      gttcaagatcacttgctctaagtacaaaagcttcaacattcgttaagcatcgcacagtac 329
                 ||| ||||| ||||| || |||||||||||||||||||| ||||| ||||  |||||||
Sbjct: 32677478 cttcgagatcgcttgcccttagtacaaaagcttcaacatttgttaaacatcttacagtac 32677419

                                               
Query: 330      gtatagcaaccaaacgcataccatgaaatct 360
                | ||||||||||||||||||||||| |||||
Sbjct: 32677418 gaatagcaaccaaacgcataccatggaatct 32677388



 Score =  163 bits (82), Expect = 8e-37
 Identities = 148/169 (87%), Gaps = 1/169 (0%)
 Strand = Plus / Minus

                                                                            
Query: 385      tgaagagtgttccaagtaccatgtgaggagttcctctccacatacatctccatcttgtaa 444
                |||||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||
Sbjct: 32677276 tgaagagtgttccaagtaccatgtcaggagctcctctccacatacatcaccttcatgtaa 32677217

                                                                            
Query: 445      tggagccctgcttccatctgcactgatgctttctagcttgcctctaactatgaagatcat 504
                 |||||  ||||||||||||||||||||||||||||||| || || |||||||||| |||
Sbjct: 32677216 cggagctttgcttccatctgcactgatgctttctagctttcccctcactatgaagaccat 32677157

                                                                 
Query: 505      tttgncgacagggccacccttgataaagaatgtcacttccactgatata 553
                |||  | || || ||| ||||||||||| ||||||||||| || |||||
Sbjct: 32677156 tttttcaactggacca-ccttgataaaggatgtcacttccgctaatata 32677109



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 126      cagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcga 185
                |||||||||| | ||| || || |||||||||||||||||||| || |||| |||||| |
Sbjct: 32677955 cagctcgcttcaatcgcctattccgatacctccatgcgacttgaatacgcgttgcagcaa 32677896

                                             
Query: 186      tggtcctccagtagggtgattcatacctg 214
                |||| |||||||||||||| |||||||||
Sbjct: 32677895 tggttctccagtagggtgactcatacctg 32677867
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>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1448_G06
          Length = 136823

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 210  acctgattgccccctgcactcttggattgcgcaagaaccgtgcaaattgtgcagtaactt 269
            |||||||||| |||||||||| ||||||||||||||| |||| |||||||| ||| ||||
Sbjct: 5773 acctgattgcaccctgcactcgtggattgcgcaagaatcgtgaaaattgtgaagttactt 5714

                                                                        
Query: 270  gttcaagatcacttgctctaagtacaaaagcttcaacattcgttaagcatcgcacagtac 329
             ||| ||||| ||||| || |||||||||||||||||||| ||||| ||||  |||||||
Sbjct: 5713 cttcgagatcgcttgcccttagtacaaaagcttcaacatttgttaaacatcttacagtac 5654

                                           
Query: 330  gtatagcaaccaaacgcataccatgaaatct 360
            | ||||||||||||||||||||||| |||||
Sbjct: 5653 gaatagcaaccaaacgcataccatggaatct 5623



 Score =  163 bits (82), Expect = 8e-37
 Identities = 148/169 (87%), Gaps = 1/169 (0%)
 Strand = Plus / Minus

                                                                        
Query: 385  tgaagagtgttccaagtaccatgtgaggagttcctctccacatacatctccatcttgtaa 444
            |||||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||
Sbjct: 5511 tgaagagtgttccaagtaccatgtcaggagctcctctccacatacatcaccttcatgtaa 5452

                                                                        
Query: 445  tggagccctgcttccatctgcactgatgctttctagcttgcctctaactatgaagatcat 504
             |||||  ||||||||||||||||||||||||||||||| || || |||||||||| |||
Sbjct: 5451 cggagctttgcttccatctgcactgatgctttctagctttcccctcactatgaagaccat 5392

                                                             
Query: 505  tttgncgacagggccacccttgataaagaatgtcacttccactgatata 553
            |||  | || || ||| ||||||||||| ||||||||||| || |||||
Sbjct: 5391 tttttcaactggacca-ccttgataaaggatgtcacttccgctaatata 5344



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 126  cagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcga 185
            |||||||||| | ||| || || |||||||||||||||||||| || |||| |||||| |
Sbjct: 6190 cagctcgcttcaatcgcctattccgatacctccatgcgacttgaatacgcgttgcagcaa 6131

                                         
Query: 186  tggtcctccagtagggtgattcatacctg 214
            |||| |||||||||||||| |||||||||
Sbjct: 6130 tggttctccagtagggtgactcatacctg 6102
to top
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1611_C08
          Length = 135386

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 210    acctgattgccccctgcactcttggattgcgcaagaaccgtgcaaattgtgcagtaactt 269
              |||||||||| |||||||||| ||||||||||||||| |||| |||||||| ||| ||||
Sbjct: 104909 acctgattgcaccctgcactcgtggattgcgcaagaatcgtgaaaattgtgaagttactt 104850

                                                                          
Query: 270    gttcaagatcacttgctctaagtacaaaagcttcaacattcgttaagcatcgcacagtac 329
               ||| ||||| ||||| || |||||||||||||||||||| ||||| ||||  |||||||
Sbjct: 104849 cttcgagatcgcttgcccttagtacaaaagcttcaacatttgttaaacatcttacagtac 104790

                                             
Query: 330    gtatagcaaccaaacgcataccatgaaatct 360
              | ||||||||||||||||||||||| |||||
Sbjct: 104789 gaatagcaaccaaacgcataccatggaatct 104759



 Score =  163 bits (82), Expect = 8e-37
 Identities = 148/169 (87%), Gaps = 1/169 (0%)
 Strand = Plus / Minus

                                                                          
Query: 385    tgaagagtgttccaagtaccatgtgaggagttcctctccacatacatctccatcttgtaa 444
              |||||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||
Sbjct: 104647 tgaagagtgttccaagtaccatgtcaggagctcctctccacatacatcaccttcatgtaa 104588

                                                                          
Query: 445    tggagccctgcttccatctgcactgatgctttctagcttgcctctaactatgaagatcat 504
               |||||  ||||||||||||||||||||||||||||||| || || |||||||||| |||
Sbjct: 104587 cggagctttgcttccatctgcactgatgctttctagctttcccctcactatgaagaccat 104528

                                                               
Query: 505    tttgncgacagggccacccttgataaagaatgtcacttccactgatata 553
              |||  | || || ||| ||||||||||| ||||||||||| || |||||
Sbjct: 104527 tttttcaactggacca-ccttgataaaggatgtcacttccgctaatata 104480



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                          
Query: 126    cagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcga 185
              |||||||||| | ||| || || |||||||||||||||||||| || |||| |||||| |
Sbjct: 105326 cagctcgcttcaatcgcctattccgatacctccatgcgacttgaatacgcgttgcagcaa 105267

                                           
Query: 186    tggtcctccagtagggtgattcatacctg 214
              |||| |||||||||||||| |||||||||
Sbjct: 105266 tggttctccagtagggtgactcatacctg 105238
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  109 bits (55), Expect = 1e-20
 Identities = 106/123 (86%)
 Strand = Plus / Plus

                                                                           
Query: 232     tggattgcgcaagaaccgtgcaaattgtgcagtaacttgttcaagatcacttgctctaag 291
               ||||||||||||||| | || |||||||| ||| |||| ||| ||||||| |||||  ||
Sbjct: 5473919 tggattgcgcaagaatcttgaaaattgtgaagtcacttcttccagatcacgtgctcgcag 5473978

                                                                           
Query: 292     tacaaaagcttcaacattcgttaagcatcgcacagtacgtatagcaaccaaacgcatacc 351
               |||||||||||||||||| ||||| ||||  ||||||||||| || ||||||||||| ||
Sbjct: 5473979 tacaaaagcttcaacatttgttaaacatctgacagtacgtatggcgaccaaacgcatgcc 5474038

                  
Query: 352     atg 354
               |||
Sbjct: 5474039 atg 5474041



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                           
Query: 385     tgaagagtgttccaagtaccatgtgaggagttcctctccacatacatctccatcttgtaa 444
               |||||| || ||||||||||| |  ||||||||||| ||||| |||||||| ||||| ||
Sbjct: 5474163 tgaagattgctccaagtaccaggaaaggagttcctcaccacaaacatctccttcttgcaa 5474222

                                                
Query: 445     tggagccctgcttccatctgcactgatgctttc 477
                |||| | |  ||||||||||||||||||||||
Sbjct: 5474223 gggagacttatttccatctgcactgatgctttc 5474255



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                           
Query: 125     tcagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcg 184
               ||||||| ||| ||||| || || ||||||||||||||||||||||||||   ||| || 
Sbjct: 5472299 tcagctctcttcagtcgccttttccgatacctccatgcgacttggatgcgatttgctgca 5472358

                                             
Query: 185     atggtcctccagtagggtgattcatacctg 214
               | | || ||||||| |||||||||||||||
Sbjct: 5472359 aggttcttccagtaaggtgattcatacctg 5472388
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>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0664C05
          Length = 165354

 Score =  109 bits (55), Expect = 1e-20
 Identities = 106/123 (86%)
 Strand = Plus / Plus

                                                                         
Query: 232   tggattgcgcaagaaccgtgcaaattgtgcagtaacttgttcaagatcacttgctctaag 291
             ||||||||||||||| | || |||||||| ||| |||| ||| ||||||| |||||  ||
Sbjct: 20827 tggattgcgcaagaatcttgaaaattgtgaagtcacttcttccagatcacgtgctcgcag 20886

                                                                         
Query: 292   tacaaaagcttcaacattcgttaagcatcgcacagtacgtatagcaaccaaacgcatacc 351
             |||||||||||||||||| ||||| ||||  ||||||||||| || ||||||||||| ||
Sbjct: 20887 tacaaaagcttcaacatttgttaaacatctgacagtacgtatggcgaccaaacgcatgcc 20946

                
Query: 352   atg 354
             |||
Sbjct: 20947 atg 20949



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                         
Query: 385   tgaagagtgttccaagtaccatgtgaggagttcctctccacatacatctccatcttgtaa 444
             |||||| || ||||||||||| |  ||||||||||| ||||| |||||||| ||||| ||
Sbjct: 21071 tgaagattgctccaagtaccaggaaaggagttcctcaccacaaacatctccttcttgcaa 21130

                                              
Query: 445   tggagccctgcttccatctgcactgatgctttc 477
              |||| | |  ||||||||||||||||||||||
Sbjct: 21131 gggagacttatttccatctgcactgatgctttc 21163



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                         
Query: 125   tcagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcg 184
             ||||||| ||| ||||| || || ||||||||||||||||||||||||||   ||| || 
Sbjct: 19207 tcagctctcttcagtcgccttttccgatacctccatgcgacttggatgcgatttgctgca 19266

                                           
Query: 185   atggtcctccagtagggtgattcatacctg 214
             | | || ||||||| |||||||||||||||
Sbjct: 19267 aggttcttccagtaaggtgattcatacctg 19296
to top
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0529B09
          Length = 138188

 Score =  109 bits (55), Expect = 1e-20
 Identities = 106/123 (86%)
 Strand = Plus / Plus

                                                                          
Query: 232    tggattgcgcaagaaccgtgcaaattgtgcagtaacttgttcaagatcacttgctctaag 291
              ||||||||||||||| | || |||||||| ||| |||| ||| ||||||| |||||  ||
Sbjct: 104853 tggattgcgcaagaatcttgaaaattgtgaagtcacttcttccagatcacgtgctcgcag 104912

                                                                          
Query: 292    tacaaaagcttcaacattcgttaagcatcgcacagtacgtatagcaaccaaacgcatacc 351
              |||||||||||||||||| ||||| ||||  ||||||||||| || ||||||||||| ||
Sbjct: 104913 tacaaaagcttcaacatttgttaaacatctgacagtacgtatggcgaccaaacgcatgcc 104972

                 
Query: 352    atg 354
              |||
Sbjct: 104973 atg 104975



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                          
Query: 385    tgaagagtgttccaagtaccatgtgaggagttcctctccacatacatctccatcttgtaa 444
              |||||| || ||||||||||| |  ||||||||||| ||||| |||||||| ||||| ||
Sbjct: 105097 tgaagattgctccaagtaccaggaaaggagttcctcaccacaaacatctccttcttgcaa 105156

                                               
Query: 445    tggagccctgcttccatctgcactgatgctttc 477
               |||| | |  ||||||||||||||||||||||
Sbjct: 105157 gggagacttatttccatctgcactgatgctttc 105189



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                          
Query: 125    tcagctcgctttagtcgtctcttacgatacctccatgcgacttggatgcgcgctgcagcg 184
              ||||||| ||| ||||| || || ||||||||||||||||||||||||||   ||| || 
Sbjct: 103233 tcagctctcttcagtcgccttttccgatacctccatgcgacttggatgcgatttgctgca 103292

                                            
Query: 185    atggtcctccagtagggtgattcatacctg 214
              | | || ||||||| |||||||||||||||
Sbjct: 103293 aggttcttccagtaaggtgattcatacctg 103322
to top
>gb|AC016550.6| Homo sapiens chromosome 5 clone CTC-261N6, complete sequence
          Length = 88581

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 548   gatatataaatttctgtcttaattttgt 575
             ||||||||||||||||| ||||||||||
Sbjct: 67031 gatatataaatttctgttttaattttgt 67058
to top
>emb|AL356269.10| Human DNA sequence from clone RP11-420J12 on chromosome 13, complete
             sequence
          Length = 141895

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 554   taaatttctgtcttaattttgt 575
             ||||||||||||||||||||||
Sbjct: 20750 taaatttctgtcttaattttgt 20771
to top
>gb|AC118290.7| Rattus norvegicus 2 BAC CH230-366D18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 210896

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 554    taaatttctgtcttaattttgt 575
              ||||||||||||||||||||||
Sbjct: 203319 taaatttctgtcttaattttgt 203298
to top
>emb|CR381704.5| Zebrafish DNA sequence from clone CH211-202F6 in linkage group 14,
             complete sequence
          Length = 130789

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 548   gatatataaatttctgtcttaa 569
             ||||||||||||||||||||||
Sbjct: 85014 gatatataaatttctgtcttaa 85035
to top
>emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 in linkage group 14,
             complete sequence
          Length = 156128

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 548   gatatataaatttctgtcttaa 569
             ||||||||||||||||||||||
Sbjct: 94617 gatatataaatttctgtcttaa 94596
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>gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, complete sequence
          Length = 115767

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 556    aatttctgtcttaattttgtca 577
              ||||||||||||||||||||||
Sbjct: 110608 aatttctgtcttaattttgtca 110587
to top
>emb|BX004830.7| Zebrafish DNA sequence from clone CH211-159I8 in linkage group 14,
              complete sequence
          Length = 201070

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 548    gatatataaatttctgtcttaa 569
              ||||||||||||||||||||||
Sbjct: 157793 gatatataaatttctgtcttaa 157772
to top
>gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, complete sequence
          Length = 192927

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 556    aatttctgtcttaattttgtca 577
              ||||||||||||||||||||||
Sbjct: 166709 aatttctgtcttaattttgtca 166730
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>gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, complete sequence
          Length = 158548

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 556    aatttctgtcttaattttgtca 577
              ||||||||||||||||||||||
Sbjct: 142548 aatttctgtcttaattttgtca 142569
to top
>gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M10, complete sequence
          Length = 157141

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 556    aatttctgtcttaattttgtca 577
              ||||||||||||||||||||||
Sbjct: 150728 aatttctgtcttaattttgtca 150749
to top
>ref|XM_822750.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.05.0040)
           partial mRNA
          Length = 3051

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 322 cacagtacgtatagcaaccaa 342
           |||||||||||||||||||||
Sbjct: 136 cacagtacgtatagcaaccaa 116
to top
>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence
          Length = 119559

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 430   atctccatcttgtaatggagc 450
             |||||||||||||||||||||
Sbjct: 95997 atctccatcttgtaatggagc 96017
to top
>gb|AC105026.4| Homo sapiens chromosome 8, clone CTD-2152D24, complete sequence
          Length = 121171

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 554    taaatttctgtcttaattttg 574
              |||||||||||||||||||||
Sbjct: 107910 taaatttctgtcttaattttg 107930
to top
>gb|AC013724.8| Homo sapiens BAC clone RP11-319E12 from 4, complete sequence
          Length = 166521

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 266    acttgttcaagatcacttgct 286
              |||||||||||||||||||||
Sbjct: 130441 acttgttcaagatcacttgct 130421
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>gb|AC012364.7| Homo sapiens BAC clone RP11-444D15 from 2, complete sequence
          Length = 155943

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   cagtaacttgttcaagatcac 281
             |||||||||||||||||||||
Sbjct: 99978 cagtaacttgttcaagatcac 99998
to top
>emb|AL121655.1|CNS01DS5 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 336P14 of
             library CITB_978_SKB from chromosome 2 of Homo sapiens
             (Human)
          Length = 101584

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   cagtaacttgttcaagatcac 281
             |||||||||||||||||||||
Sbjct: 44227 cagtaacttgttcaagatcac 44247
to top
>gb|AC170423.1| Rhesus Macaque  BAC CH250-107D17 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 167419

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    agtaacttgttcaagatcac 281
              ||||||||||||||||||||
Sbjct: 131485 agtaacttgttcaagatcac 131466
to top
>ref|NM_014350.1| Homo sapiens tumor necrosis factor, alpha-induced protein 8
            (TNFAIP8), mRNA
          Length = 2003

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1743 cttgataaagaatgtcactt 1762
to top
>gb|BC007014.1| Homo sapiens tumor necrosis factor, alpha-induced protein 8, mRNA
            (cDNA clone MGC:12346 IMAGE:3930240), complete cds
          Length = 2081

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1807 cttgataaagaatgtcactt 1826
to top
>gb|BC005352.1| Homo sapiens tumor necrosis factor, alpha-induced protein 8, mRNA
            (cDNA clone MGC:12451 IMAGE:3997650), complete cds
          Length = 1814

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1714 cttgataaagaatgtcactt 1733
to top
>gb|AC073208.4| Homo sapiens BAC clone RP11-418B19 from 7, complete sequence
          Length = 71606

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 50647 agtaacttgttcaagatcac 50628
to top
>emb|CR956355.2| Pan troglodytes chromosome X BAC RP43-051D20, complete sequence
          Length = 185393

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 33560 agtaacttgttcaagatcac 33541
to top
>gb|AC127268.2| Mus musculus BAC clone RP23-426K20 from chromosome 3, complete sequence
          Length = 182377

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   tgttccaagtaccatgtgag 411
             ||||||||||||||||||||
Sbjct: 60401 tgttccaagtaccatgtgag 60382
to top
>gb|AC146048.3| Pan troglodytes BAC clone RP43-44J1 from 7, complete sequence
          Length = 135620

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 77461 agtaacttgttcaagatcac 77442
to top
>gb|AC069286.7| Homo sapiens BAC clone RP11-261N10 from 7, complete sequence
          Length = 157118

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 39336 agtaacttgttcaagatcac 39317
to top
>gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, complete sequence
          Length = 207781

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 541    ttccactgatatataaattt 560
              ||||||||||||||||||||
Sbjct: 181164 ttccactgatatataaattt 181145
to top
>emb|AL391841.17| Human DNA sequence from clone RP11-123G14 on chromosome 13 Contains
             part of a novel gene (FLJ22153) and a CpG island, complete
             sequence
          Length = 99441

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   taaatttctgtcttaatttt 573
             ||||||||||||||||||||
Sbjct: 56883 taaatttctgtcttaatttt 56902
to top
>emb|AL392173.8| Human DNA sequence from clone RP11-158M9 on chromosome Xq26.1-27.1,
             complete sequence
          Length = 170746

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 43494 agtaacttgttcaagatcac 43475
to top
>emb|AL139401.14| Human DNA sequence from clone RP5-1154A22 on chromosome X, complete
             sequence
          Length = 16392

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 15223 agtaacttgttcaagatcac 15204
to top
>emb|AL139333.10| Human DNA sequence from clone RP11-536I19 on chromosome 6 Contains the
             3' end of a novel gene, the 5' part of a novel gene
             similar to C21ORF5 (KIAA0933) and a CpG island, complete
             sequence
          Length = 98444

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ataccatgaaatctactttt 366
             ||||||||||||||||||||
Sbjct: 77205 ataccatgaaatctactttt 77186
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>gb|AC044873.13| Homo sapiens chromosome 18, clone RP11-715C4, complete sequence
          Length = 179454

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   tctgtcttaattttgtcaca 579
             ||||||||||||||||||||
Sbjct: 58149 tctgtcttaattttgtcaca 58168
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>emb|AL121903.13|HSDJ155G6 Human DNA sequence from clone RP1-155G6 on chromosome 20 Contains the
             3' end of the ARFGEF2 gene for ADP-ribosylation factor
             guanine nucleotide-exchange factor 2 (brefeldin
             A-inhibited), the 5' end of the CSE1L gene for chromosome
             segregation 1-like (yeast), the SNAP23P gene for
             synaptosomal-associated protein (23 kDa) pseudogene, a
             novel gene and a CpG island, complete sequence
          Length = 80600

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 63220 agtaacttgttcaagatcac 63201
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>emb|AL034582.11|HS594I10 Human DNA sequence from clone RP4-594I10 on chromosome 1p33-35.3
             Contains the DSCR1L2 gene for Down syndrome critical
             region gene 1-like 2 and a CpG island, complete sequence
          Length = 46738

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 33500 agtaacttgttcaagatcac 33481
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>emb|AL022397.1|HS11C7 Human DNA sequence from clone CTA-11C7 on chromosome 1q32.1-32.3
             Contains part of the SYT14 gene for synaptotagmin XIV,
             complete sequence
          Length = 109302

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 554   taaatttctgtcttaattttgtca 577
             ||||||||| ||||||||||||||
Sbjct: 59046 taaatttctatcttaattttgtca 59023
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>gb|U50184.1| Caenorhabditis elegans cosmid W03A3, complete sequence
          Length = 14968

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 549  atatataaatttctgtcttaattt 572
            ||||| ||||||||||||||||||
Sbjct: 3891 atataaaaatttctgtcttaattt 3868
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>emb|BX465841.9| Zebrafish DNA sequence from clone CH211-198K5 in linkage group 21,
             complete sequence
          Length = 83186

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   taagtacaaaagcttcaaca 307
             ||||||||||||||||||||
Sbjct: 74842 taagtacaaaagcttcaaca 74823
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>emb|CR615621.1| full-length cDNA clone CS0DC024YA23 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1733

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1540 cttgataaagaatgtcactt 1559
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>gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, complete sequence
          Length = 168531

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 558    tttctgtcttaattttgtca 577
              ||||||||||||||||||||
Sbjct: 112786 tttctgtcttaattttgtca 112767
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>dbj|AK222439.1| Ciona intestinalis mRNA for zinc finger protein, complete cds, clone:
            cicl019o24
          Length = 2141

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 117  ttgatctttcagctcgctttagtc 140
            |||||||| |||||||||||||||
Sbjct: 1797 ttgatcttacagctcgctttagtc 1820
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>emb|CR753829.1| Human DNA sequence from clone XX-NCIH2171_14G18, complete sequence
          Length = 111550

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 81446 agtaacttgttcaagatcac 81465
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>dbj|AK097884.1| Homo sapiens cDNA FLJ40565 fis, clone THYMU2004688, highly similar to
            Homo sapiens MDC-3.13 isoform 2 mRNA
          Length = 1766

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1678 cttgataaagaatgtcactt 1697
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>emb|CR615131.1| full-length cDNA clone CS0DI081YO11 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1754

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1540 cttgataaagaatgtcactt 1559
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>dbj|AK097284.1| Homo sapiens cDNA FLJ39965 fis, clone SPLEN2027157, highly similar to
            Homo sapiens MDC-3.13 isoform 2 mRNA
          Length = 2502

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 2259 cttgataaagaatgtcactt 2278
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>emb|CR611795.1| full-length cDNA clone CS0DI057YA07 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1610

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1540 cttgataaagaatgtcactt 1559
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>dbj|AK001931.1| Homo sapiens cDNA FLJ11069 fis, clone PLACE1004930, highly similar to
            Homo sapiens MDC-3.13 isoform 2 mRNA
          Length = 1921

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1678 cttgataaagaatgtcactt 1697
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>dbj|AK001850.1| Homo sapiens cDNA FLJ10988 fis, clone PLACE1001920, highly similar to
            Homo sapiens MDC-3.13 isoform 2 mRNA
          Length = 1729

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1641 cttgataaagaatgtcactt 1660
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>gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 202703

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 25901 agtaacttgttcaagatcac 25882
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>gb|AC090214.3| Homo sapiens chromosome 18, clone RP11-800G9, complete sequence
          Length = 95648

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 554   taaatttctgtcttaatttt 573
             ||||||||||||||||||||
Sbjct: 77679 taaatttctgtcttaatttt 77660
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>gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence
          Length = 172123

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 70066 agtaacttgttcaagatcac 70085
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>gb|AC093896.3| Homo sapiens BAC clone RP11-719N9 from 4, complete sequence
          Length = 156177

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 556    aatttctgtcttaattttgt 575
              ||||||||||||||||||||
Sbjct: 114290 aatttctgtcttaattttgt 114271
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>gb|AC026702.6| Homo sapiens chromosome 5 clone CTC-575I10, complete sequence
          Length = 148737

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    tatataaatttctgtcttaa 569
              ||||||||||||||||||||
Sbjct: 116034 tatataaatttctgtcttaa 116053
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>gb|AC022733.8| Homo sapiens chromosome 8, clone RP11-470M17, complete sequence
          Length = 175202

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 558    tttctgtcttaattttgtca 577
              ||||||||||||||||||||
Sbjct: 145166 tttctgtcttaattttgtca 145185
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>gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence
          Length = 175834

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    agtaacttgttcaagatcac 281
              ||||||||||||||||||||
Sbjct: 138440 agtaacttgttcaagatcac 138421
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>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence
          Length = 189732

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    agtaacttgttcaagatcac 281
              ||||||||||||||||||||
Sbjct: 150352 agtaacttgttcaagatcac 150371
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>gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, complete sequence
          Length = 142715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    tatataaatttctgtcttaa 569
              ||||||||||||||||||||
Sbjct: 113797 tatataaatttctgtcttaa 113778
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>gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, complete sequence
          Length = 156277

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    cttgataaagaatgtcactt 542
              ||||||||||||||||||||
Sbjct: 126694 cttgataaagaatgtcactt 126675
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>gb|AC026421.4| Homo sapiens chromosome 5 clone CTD-2127O16, complete sequence
          Length = 170355

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 59966 agtaacttgttcaagatcac 59985
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>gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-131K21, complete sequence
          Length = 181602

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 554   taaatttctgtcttaatttt 573
             ||||||||||||||||||||
Sbjct: 35670 taaatttctgtcttaatttt 35651
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>gb|AC035144.3|AC035144 Homo sapiens chromosome 5 clone CTD-2220M12, complete sequence
          Length = 112626

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   cttgataaagaatgtcactt 542
             ||||||||||||||||||||
Sbjct: 66588 cttgataaagaatgtcactt 66607
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>gb|AC011443.6|AC011443 Homo sapiens chromosome 19 clone CTC-218B8, complete sequence
          Length = 156776

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 40   ctgtcaccccctctgtccaggctg 63
            ||||||||| ||||||||||||||
Sbjct: 5234 ctgtcaccctctctgtccaggctg 5257
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>gb|AC116172.2| Homo sapiens BAC clone RP11-24L21 from 4, complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 554   taaatttctgtcttaattttgtca 577
             ||||||||| ||||||||||||||
Sbjct: 35872 taaatttctttcttaattttgtca 35895
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>gb|AC129946.9| Mus musculus chromosome 5, clone RP24-512F21, complete sequence
          Length = 141041

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 541   ttccactgatatataaattt 560
             ||||||||||||||||||||
Sbjct: 84642 ttccactgatatataaattt 84661
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>gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, complete sequence
          Length = 187191

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   agtaacttgttcaagatcac 281
             ||||||||||||||||||||
Sbjct: 86509 agtaacttgttcaagatcac 86528
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>gb|AE004441.1| Pseudomonas aeruginosa PAO1, section 2 of 529 of the complete genome
          Length = 12213

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 447  gagccctgcttccatctgca 466
            ||||||||||||||||||||
Sbjct: 7118 gagccctgcttccatctgca 7137
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>gb|AC013716.6| Homo sapiens BAC clone RP11-22L19 from 2, complete sequence
          Length = 168265

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 552   tataaatttctgtcttaattttgt 575
             ||||||||||||||||| ||||||
Sbjct: 94903 tataaatttctgtcttagttttgt 94926
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>gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, complete sequence
          Length = 158057

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    cttgataaagaatgtcactt 542
              ||||||||||||||||||||
Sbjct: 133928 cttgataaagaatgtcactt 133909
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>gb|AC010605.4|AC010605 Homo sapiens chromosome 19 clone CTB-189B5, complete sequence
          Length = 86684

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    ctgtcaccccctctgtccaggctg 63
             ||||||||| ||||||||||||||
Sbjct: 71648 ctgtcaccctctctgtccaggctg 71671
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>gb|AF098934.1|AF098934 Homo sapiens head and neck tumor and metastasis related mRNA,
           partial 3'UTR
          Length = 745

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 523 cttgataaagaatgtcactt 542
           ||||||||||||||||||||
Sbjct: 504 cttgataaagaatgtcactt 523
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>gb|AF073952.1|AF073952 Pseudomonas aeruginosa methionyl-tRNA formyltransferase (fmt) gene,
           complete cds
          Length = 945

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 447 gagccctgcttccatctgca 466
           ||||||||||||||||||||
Sbjct: 438 gagccctgcttccatctgca 419
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>gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15H11 genomic sequence, complete
             sequence
          Length = 110514

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 552   tataaatttctgtcttaattttgt 575
             ||||||||||||||| ||||||||
Sbjct: 85685 tataaatttctgtctaaattttgt 85708
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>gb|AF070671.1|AF070671 Homo sapiens TNF-induced protein GG2-1 mRNA, complete cds
          Length = 1892

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1638 cttgataaagaatgtcactt 1657
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>gb|AF053645.1|HSCSE1G3 Homo sapiens cellular apoptosis susceptibility protein (CSE1) gene,
            exons 3 through 10
          Length = 12597

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  agtaacttgttcaagatcac 281
            ||||||||||||||||||||
Sbjct: 1983 agtaacttgttcaagatcac 1964
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>emb|AL355886.4|CNS05TCX Human chromosome 14 DNA sequence BAC R-372C16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164609

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    agtaacttgttcaagatcac 281
              ||||||||||||||||||||
Sbjct: 104985 agtaacttgttcaagatcac 104966
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>dbj|AP001831.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-317J19, complete
              sequence
          Length = 185919

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    agtaacttgttcaagatcac 281
              ||||||||||||||||||||
Sbjct: 127566 agtaacttgttcaagatcac 127547
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>gb|AF099936.1|AF099936 Homo sapiens MDC-3.13 isoform 1 mRNA, complete cds
          Length = 2003

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1743 cttgataaagaatgtcactt 1762
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>gb|AF099935.1|AF099935 Homo sapiens MDC-3.13 isoform 2 mRNA, complete cds
          Length = 1915

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cttgataaagaatgtcactt 542
            ||||||||||||||||||||
Sbjct: 1654 cttgataaagaatgtcactt 1673
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>emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chromosome X, complete
              sequence
          Length = 175809

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 463    tgcactgatgctttctagcttgcc 486
              |||||| |||||||||||||||||
Sbjct: 112991 tgcactaatgctttctagcttgcc 113014


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,253,467
Number of Sequences: 3902068
Number of extensions: 4253467
Number of successful extensions: 80159
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79967
Number of HSP's gapped (non-prelim): 182
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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