ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34j14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AE012148.1| Xanthomonas campestris pv. campestris str. ATCC 3... 48 0.038
2gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 48 0.038
3emb|CR388011.14| Zebrafish DNA sequence from clone CH211-135J15 ... 46 0.15
4emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 ... 42 2.3
5emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in l... 42 2.3
6gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B... 42 2.3
7emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in ... 42 2.3
8ref|NM_203000.1| Arabidopsis thaliana unknown protein AT5G04220 ... 40 9.2
9ref|NM_120504.1| Arabidopsis thaliana unknown protein AT5G04220 ... 40 9.2
10gb|BC101717.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 9.2
11gb|BC107734.1| Homo sapiens cDNA clone IMAGE:4770567, partial cds 40 9.2
12ref|NM_184732.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
13ref|XM_527549.1| PREDICTED: Pan troglodytes similar to Sorting n... 40 9.2
14gb|AC167559.2| Echinops telfairi, clone Echinops telfairi -24239... 40 9.2
15gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
16gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 9.2
17gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
18gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
19gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
20gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, com... 40 9.2
21gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
22gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
23gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
24ref|XM_322928.1| Neurospora crassa OR74A hypothetical protein ( ... 40 9.2
25gb|BC012059.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 9.2
26ref|XM_956261.1| Neurospora crassa OR74A hypothetical protein ( ... 40 9.2
27gb|DQ492684.1| Homo sapiens heat shock transcription factor 2 (H... 40 9.2
28ref|NM_016224.3| Homo sapiens sorting nexin 9 (SNX9), mRNA 40 9.2
29ref|NM_017778.2| Homo sapiens Wolf-Hirschhorn syndrome candidate... 40 9.2
30ref|NM_023034.1| Homo sapiens Wolf-Hirschhorn syndrome candidate... 40 9.2
31gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 9.2
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.2
33gb|DQ465384.1| Oreochromis mossambicus clone SSH #509 mitochondr... 40 9.2
34gb|BC007787.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 9.2
35gb|BC000030.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 9.2
36ref|XM_541426.2| PREDICTED: Canis familiaris hypothetical LOC484... 40 9.2
37gb|BC001084.2| Homo sapiens sorting nexin 9, mRNA (cDNA clone IM... 40 9.2
38gb|BC115006.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 9.2
39gb|BC073858.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 9.2
40emb|AL513322.18| Human DNA sequence from clone RP11-332M15 on ch... 40 9.2
41gb|BT009742.1| Synthetic construct Homo sapiens sorting nexin 9 ... 40 9.2
42emb|AL133352.12| Human DNA sequence from clone RP11-411B6 on chr... 40 9.2
43emb|AL121954.7|HSDJ506O9 Human DNA sequence from clone RP3-506O9... 40 9.2
44emb|AL035634.7|HS403L10 Human DNA sequence from clone RP3-403L10... 40 9.2
45emb|AL034561.5|HS692C8 Human DNA sequence from clone RP4-692C8 o... 40 9.2
46gb|AY059741.1| Arabidopsis thaliana At5g04220 mRNA sequence 40 9.2
47gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, compl... 40 9.2
48gb|AC091233.8| Oryza sativa chromosome 3 BAC OSJNBa0053G10 genom... 40 9.2
49emb|AL513444.1|NCB11N2 Neurospora crassa DNA linkage group V BAC... 40 9.2
50emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome 5, BA... 40 9.2
51gb|BC005022.1| Homo sapiens sorting nexin 9, mRNA (cDNA clone MG... 40 9.2
52emb|AJ295991.1|HSA295991 Homo sapiens mRNA for Putative Chromati... 40 9.2
53emb|AJ295990.1|HSA295990 Homo sapiens mRNA for putative chromati... 40 9.2
54emb|CR860331.1| Pongo pygmaeus mRNA; cDNA DKFZp459D0545 (from cl... 40 9.2
55dbj|AK127345.1| Homo sapiens cDNA FLJ45417 fis, clone BRHIP30338... 40 9.2
56dbj|AK022560.1| Homo sapiens cDNA FLJ12498 fis, clone NT2RM20016... 40 9.2
57gb|AF331667.1| Homo sapiens heat shock factor 2 (HSF2) gene, pro... 40 9.2
58ref|NM_134476.1| Drosophila melanogaster CG14218-RA (CG14218), mRNA 40 9.2
59gb|AF318339.1|AF318339 Homo sapiens pp14328 mRNA, complete cds 40 9.2
60gb|AF172847.1|AF172847 Homo sapiens sorting nexin 9 (SNX9) mRNA,... 40 9.2
61gb|AC008942.6| Homo sapiens chromosome 5 clone CTD-2320O4, compl... 40 9.2
62dbj|AB168588.1| Macaca fascicularis testis cDNA clone: QtsA-1324... 40 9.2
63gb|AF121859.1|AF121859 Homo sapiens sorting nexin 9 (SNX9) mRNA,... 40 9.2
64gb|AF332469.1|AF332469 Homo sapiens putative protein WHSC1L1l (W... 40 9.2
65gb|AF332468.1|AF332468 Homo sapiens putative protein WHSC1L1s (W... 40 9.2
66gb|AY028171.1| Leishmania donovani extra chromosome XC290, parti... 40 9.2
67dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
68dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
69dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
70dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
71dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
72dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
73dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
74gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 9.2
75gb|AF255649.1|AF255649 Homo sapiens DC28 mRNA, complete cds 40 9.2
76gb|AC016712.6| Homo sapiens BAC clone RP11-266F17 from 2, comple... 40 9.2
77gb|AC021648.25| Homo sapiens 12 BAC RP11-255I14 (Roswell Park Ca... 40 9.2
78gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, comple... 40 9.2
79dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 9.2
80dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
81dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
82dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
83dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
84dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
85dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
86gb|AY892921.1| Synthetic construct Homo sapiens clone FLH135182.... 40 9.2
87gb|AY892413.1| Synthetic construct Homo sapiens clone FLH014894.... 40 9.2
88gb|AY892412.1| Synthetic construct Homo sapiens clone FLH014893.... 40 9.2
89gb|AY890463.1| Synthetic construct Homo sapiens clone FLH135186.... 40 9.2
90dbj|AK026637.1| Homo sapiens cDNA: FLJ22984 fis, clone KAT11574,... 40 9.2
91emb|AJ295992.1|HSA295992 Homo sapiens mRNA for putative chromati... 40 9.2
92gb|AF131214.1|AF131214 Homo sapiens SH3 and PX domain-containing... 40 9.2
93gb|AC117576.11| Mus musculus chromosome 1, clone RP23-34E15, com... 40 9.2
94gb|AF076957.1|AF076957 Homo sapiens SDP1 protein mRNA, complete cds 40 9.2
95gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 9.2
96gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
97gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
98emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.2
99gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complet... 40 9.2
100gb|AC157952.2| Gallus gallus BAC clone CH261-57A7 from chromosom... 40 9.2
101gb|AC157664.2| Gallus gallus BAC clone CH261-174B17 from chromos... 40 9.2
102gb|BC062631.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 9.2
103dbj|AB209736.1| Homo sapiens mRNA for sorting nexin 9 variant pr... 40 9.2
104gb|AC087362.13| Homo sapiens chromosome 8, clone RP11-513D5, com... 40 9.2 
>gb|AE012148.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 56 of
            460 of the complete genome
          Length = 10978

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 644  atgctcgatgcccatgccagcaccatca 671
            |||||||||||||||||| |||||||||
Sbjct: 8770 atgctcgatgcccatgccggcaccatca 8743
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 644    atgctcgatgcccatgccagcaccatca 671
              |||||||||||||||||| |||||||||
Sbjct: 620764 atgctcgatgcccatgccggcaccatca 620737
to top
>emb|CR388011.14| Zebrafish DNA sequence from clone CH211-135J15 in linkage group 19,
             complete sequence
          Length = 163300

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 292   cgaacgtgttgctgctgcgaaga 314
             |||||||||||||||||||||||
Sbjct: 25552 cgaacgtgttgctgctgcgaaga 25574
to top
>emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 in linkage group 15,
              complete sequence
          Length = 140307

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 440    atcttcccttttcagctcctt 460
              |||||||||||||||||||||
Sbjct: 137138 atcttcccttttcagctcctt 137118
to top
>emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in linkage group 19,
             complete sequence
          Length = 147881

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 542   caagacaattgctttttcaat 562
             |||||||||||||||||||||
Sbjct: 75230 caagacaattgctttttcaat 75210
to top
>gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B23, complete sequence
          Length = 126010

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   caaactaccttattacaaata 200
             |||||||||||||||||||||
Sbjct: 45639 caaactaccttattacaaata 45659
to top
>emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in linkage group 19, complete
              sequence
          Length = 255824

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 542    caagacaattgctttttcaat 562
              |||||||||||||||||||||
Sbjct: 246931 caagacaattgctttttcaat 246911
to top
>ref|NM_203000.1| Arabidopsis thaliana unknown protein AT5G04220 transcript variant
          AT5G04220.2 mRNA, complete cds
          Length = 1999

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 41 ttgcataagagaaacaaaaa 60
          ||||||||||||||||||||
Sbjct: 35 ttgcataagagaaacaaaaa 16
to top
>ref|NM_120504.1| Arabidopsis thaliana unknown protein AT5G04220 transcript variant
          AT5G04220.1 mRNA, complete cds
          Length = 2026

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 41 ttgcataagagaaacaaaaa 60
          ||||||||||||||||||||
Sbjct: 36 ttgcataagagaaacaaaaa 17
to top
>gb|BC101717.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1,
           transcript variant long, mRNA (cDNA clone MGC:126766
           IMAGE:8069223), complete cds
          Length = 4504

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 479 ccctccacagccaccacctcctcc 502
to top
>gb|BC107734.1| Homo sapiens cDNA clone IMAGE:4770567, partial cds
          Length = 1100

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 881 ccctccacagccaccacctcctcc 904
to top
>ref|NM_184732.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 571  ccacagcctccacctcctcc 590
            ||||||||||||||||||||
Sbjct: 1162 ccacagcctccacctcctcc 1143
to top
>ref|XM_527549.1| PREDICTED: Pan troglodytes similar to Sorting nexin 9 (SH3 and PX
            domain-containing protein 1) (SDP1 protein) (LOC472172),
            mRNA
          Length = 3948

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 3492 acaagacaaacagaacatgg 3511
to top
>gb|AC167559.2| Echinops telfairi, clone Echinops telfairi -24239157I1, complete
            sequence
          Length = 35266

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 36   gaaagttgcataagagaaacaaaa 59
            ||||||| ||||||||||||||||
Sbjct: 6676 gaaagtttcataagagaaacaaaa 6699
to top
>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12,
             complete sequence
          Length = 146632

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 34717 ccacagcctccacctcctcc 34736
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 574    cagcctccacctcctccgga 593
              ||||||||||||||||||||
Sbjct: 474315 cagcctccacctcctccgga 474296
to top
>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0022B03, complete sequence
          Length = 151814

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 43560 ccacagcctccacctcctcc 43579
to top
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0028G07, complete sequence
          Length = 157463

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 15093 ccacagcctccacctcctcc 15074
to top
>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0027P09, complete sequence
          Length = 171861

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 58889 ccacagcctccacctcctcc 58870
to top
>gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, complete sequence
          Length = 167357

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 440  atcttcccttttcagctcct 459
            ||||||||||||||||||||
Sbjct: 2214 atcttcccttttcagctcct 2195
to top
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 17835 ccacagcctccacctcctcc 17816
to top
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10,
             complete sequence
          Length = 138209

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 70724 ccacagcctccacctcctcc 70705
to top
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1384_A02, complete sequence
          Length = 100251

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 21809 ccacagcctccacctcctcc 21790
to top
>ref|XM_322928.1| Neurospora crassa OR74A hypothetical protein ( (AL513444)
           hypothetical protein [Neurospora crassa OR74A]  )
           (NCU03627.1) partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 tggaatgaagaaaccaaggg 388
           ||||||||||||||||||||
Sbjct: 624 tggaatgaagaaaccaaggg 605
to top
>gb|BC012059.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1,
           transcript variant short, mRNA (cDNA clone
           IMAGE:4552610), complete cds
          Length = 2836

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 873 ccctccacagccaccacctcctcc 896
to top
>ref|XM_956261.1| Neurospora crassa OR74A hypothetical protein ( (AL513444)
           hypothetical protein [Neurospora crassa OR74A]  )
           (NCU03627.1) partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 tggaatgaagaaaccaaggg 388
           ||||||||||||||||||||
Sbjct: 624 tggaatgaagaaaccaaggg 605
to top
>gb|DQ492684.1| Homo sapiens heat shock transcription factor 2 (HSF2) gene,
           complete cds
          Length = 37258

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 397 aagatatatgtatacctcttccaa 420
           |||||||||||||| |||||||||
Sbjct: 755 aagatatatgtatatctcttccaa 732
to top
>ref|NM_016224.3| Homo sapiens sorting nexin 9 (SNX9), mRNA
          Length = 4200

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1766 acaagacaaacagaacatgg 1785
to top
>ref|NM_017778.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1),
           transcript variant short, mRNA
          Length = 3995

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
to top
>ref|NM_023034.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1),
           transcript variant long, mRNA
          Length = 5431

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
to top
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 568     cctccacagcctccacctcc 587
               ||||||||||||||||||||
Sbjct: 4765873 cctccacagcctccacctcc 4765892
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 19425875 ccacagcctccacctcctcc 19425856
to top
>gb|DQ465384.1| Oreochromis mossambicus clone SSH #509 mitochondrial isocitrate
           dehydrogenase 2-like mRNA, complete cds; nuclear gene
           for mitochondrial product
          Length = 1674

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 506 acgaagacagagttgaagagtttg 529
           |||||| |||||||||||||||||
Sbjct: 423 acgaagccagagttgaagagtttg 446
to top
>gb|BC007787.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:3546345), partial cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 896 ccctccacagccaccacctcctcc 919
to top
>gb|BC000030.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:3505788), partial cds
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 923 ccctccacagccaccacctcctcc 946
to top
>ref|XM_541426.2| PREDICTED: Canis familiaris hypothetical LOC484310 (LOC484310), mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 574  cagcctccacctcctccgga 593
            ||||||||||||||||||||
Sbjct: 1165 cagcctccacctcctccgga 1146
to top
>gb|BC001084.2| Homo sapiens sorting nexin 9, mRNA (cDNA clone IMAGE:2958415),
           partial cds
          Length = 958

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  acaagacaaacagaacatgg 102
           ||||||||||||||||||||
Sbjct: 658 acaagacaaacagaacatgg 677
to top
>gb|BC115006.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone MGC:131572 IMAGE:7961962), complete cds
          Length = 4467

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 500 ccctccacagccaccacctcctcc 523
to top
>gb|BC073858.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:4179405)
          Length = 1844

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 431 ccctccacagccaccacctcctcc 454
to top
>emb|AL513322.18| Human DNA sequence from clone RP11-332M15 on chromosome 1 Contains the
             5' end of the SIL gene for TAL1 (SCL) interrupting locus,
             the 5' end of the  gene for UMP-CMP kinase (UMP-CMPK) and
             a CpG island, complete sequence
          Length = 68049

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 459   ttttgcctcaccttgtcatccctg 482
             ||||||||||||||||||| ||||
Sbjct: 54331 ttttgcctcaccttgtcattcctg 54354
to top
>gb|BT009742.1| Synthetic construct Homo sapiens sorting nexin 9 mRNA, partial cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1593 acaagacaaacagaacatgg 1612
to top
>emb|AL133352.12| Human DNA sequence from clone RP11-411B6 on chromosome 10 Contains the 3'
              end of the WNT8B gene for wingless-type MMTV integration
              site family member 8B, the gene for secretory pathway
              component Sec31B-1 (SEC31B-1), the NDUFB8 gene for NADH
              dehydrogenase (ubiquinone) 1 beta subcomplex 8, 19kDa, the
              HIF1AN gene for hypoxia-inducible factor 1, alpha subunit
              inhibitor and four CpG islands, complete sequence
          Length = 157808

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    ccaaggggtgggggcaagat 401
              ||||||||||||||||||||
Sbjct: 149617 ccaaggggtgggggcaagat 149636
to top
>emb|AL121954.7|HSDJ506O9 Human DNA sequence from clone RP3-506O9 on chromosome 6q22.31-23.33
            Contains the 5' end of the HSF2 gene for heat shock
            transcription factor 2 and a  CpG island, complete
            sequence
          Length = 14185

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 397  aagatatatgtatacctcttccaa 420
            |||||||||||||| |||||||||
Sbjct: 9768 aagatatatgtatatctcttccaa 9745
to top
>emb|AL035634.7|HS403L10 Human DNA sequence from clone RP3-403L10 on chromosome 6q25.1-26
           Contains part of the SNX9 gene for sorting nexin 9 (SH3
           and PX domain-containing protein (SH3PX1, SDP1),
           FLJ22984), an HSPE1 (heat shock 10kD protein 1
           (chaperonin 10)) pseudogene and a novel gene, complete
           sequence
          Length = 60215

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  acaagacaaacagaacatgg 102
           ||||||||||||||||||||
Sbjct: 192 acaagacaaacagaacatgg 173
to top
>emb|AL034561.5|HS692C8 Human DNA sequence from clone RP4-692C8 on chromosome 20p11.22-12.2
             Contains GSSs and STSs, complete sequence
          Length = 125698

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   gaacatcttatcttcatttt 501
             ||||||||||||||||||||
Sbjct: 71949 gaacatcttatcttcatttt 71968
to top
>gb|AY059741.1| Arabidopsis thaliana At5g04220 mRNA sequence
          Length = 2042

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 41 ttgcataagagaaacaaaaa 60
          ||||||||||||||||||||
Sbjct: 36 ttgcataagagaaacaaaaa 17
to top
>gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, complete sequence
          Length = 169076

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    ttttctacgaagacagagtt 519
              ||||||||||||||||||||
Sbjct: 121247 ttttctacgaagacagagtt 121266
to top
>gb|AC091233.8| Oryza sativa chromosome 3 BAC OSJNBa0053G10 genomic sequence, complete
              sequence
          Length = 145155

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    ccacagcctccacctcctcc 590
              ||||||||||||||||||||
Sbjct: 127162 ccacagcctccacctcctcc 127181
to top
>emb|AL513444.1|NCB11N2 Neurospora crassa DNA linkage group V BAC contig B11N2
          Length = 99360

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   tggaatgaagaaaccaaggg 388
             ||||||||||||||||||||
Sbjct: 52836 tggaatgaagaaaccaaggg 52817
to top
>emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome 5, BAC clone F21E1 (ESSA project)
          Length = 97451

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ttgcataagagaaacaaaaa 60
             ||||||||||||||||||||
Sbjct: 62389 ttgcataagagaaacaaaaa 62408
to top
>gb|BC005022.1| Homo sapiens sorting nexin 9, mRNA (cDNA clone MGC:12550
            IMAGE:3832234), complete cds
          Length = 2065

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1764 acaagacaaacagaacatgg 1783
to top
>emb|AJ295991.1|HSA295991 Homo sapiens mRNA for Putative Chromatin modulator, alternative
           splice NSD3L2
          Length = 5107

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 700 ccctccacagccaccacctcctcc 723
to top
>emb|AJ295990.1|HSA295990 Homo sapiens mRNA for putative chromatin modulator, alternative
           splice NSD3L
          Length = 5254

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 700 ccctccacagccaccacctcctcc 723
to top
>emb|CR860331.1| Pongo pygmaeus mRNA; cDNA DKFZp459D0545 (from clone DKFZp459D0545)
          Length = 3214

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 457 ccctccacagccaccacctcctcc 480
to top
>dbj|AK127345.1| Homo sapiens cDNA FLJ45417 fis, clone BRHIP3033811, highly  similar
            to Sorting nexin 9
          Length = 3573

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1712 acaagacaaacagaacatgg 1731
to top
>dbj|AK022560.1| Homo sapiens cDNA FLJ12498 fis, clone NT2RM2001668, weakly similar
           to Homo sapiens putative WHSC1 protein (WHSC1) mRNA,
           alternative splice product ending in intron 11
          Length = 3290

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 582 ccctccacagccaccacctcctcc 605
to top
>gb|AF331667.1| Homo sapiens heat shock factor 2 (HSF2) gene, promoter sequence
          Length = 2651

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 397  aagatatatgtatacctcttccaa 420
            |||||||||||||| |||||||||
Sbjct: 1490 aagatatatgtatatctcttccaa 1467
to top
>ref|NM_134476.1| Drosophila melanogaster CG14218-RA (CG14218), mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 568 cctccacagcctccacctcctccg 591
           ||||||| ||||||||||||||||
Sbjct: 508 cctccaccgcctccacctcctccg 531
to top
>gb|AF318339.1|AF318339 Homo sapiens pp14328 mRNA, complete cds
          Length = 1290

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 567  ccctccacagcctccacctcctcc 590
            |||||||||||| |||||||||||
Sbjct: 1076 ccctccacagccaccacctcctcc 1099
to top
>gb|AF172847.1|AF172847 Homo sapiens sorting nexin 9 (SNX9) mRNA, complete cds
          Length = 4175

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1737 acaagacaaacagaacatgg 1756
to top
>gb|AC008942.6| Homo sapiens chromosome 5 clone CTD-2320O4, complete sequence
          Length = 148917

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    ggggcaagatatatgtatac 411
              ||||||||||||||||||||
Sbjct: 137004 ggggcaagatatatgtatac 136985
to top
>dbj|AB168588.1| Macaca fascicularis testis cDNA clone: QtsA-13248, similar to human
            sorting nexin 9 (SNX9), mRNA, RefSeq: NM_016224.3
          Length = 2020

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1692 acaagacaaacagaacatgg 1711
to top
>gb|AF121859.1|AF121859 Homo sapiens sorting nexin 9 (SNX9) mRNA, complete cds
          Length = 2271

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1617 acaagacaaacagaacatgg 1636
to top
>gb|AF332469.1|AF332469 Homo sapiens putative protein WHSC1L1l (WHSC1L1) mRNA, complete
           cds, alternatively spliced
          Length = 5431

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
to top
>gb|AF332468.1|AF332468 Homo sapiens putative protein WHSC1L1s (WHSC1L1) mRNA, complete
           cds, alternatively spliced
          Length = 3995

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
to top
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence
          Length = 44273

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   gtgttgctgctgcgaagaaa 316
             ||||||||||||||||||||
Sbjct: 43345 gtgttgctgctgcgaagaaa 43364
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 26892868 ccacagcctccacctcctcc 26892849
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 17421079 ccacagcctccacctcctcc 17421060



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 15649208 ccacagcctccacctcctcc 15649189
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 13447090 ccacagcctccacctcctcc 13447109
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 401      tatatgtatacctcttccaa 420
                ||||||||||||||||||||
Sbjct: 17064494 tatatgtatacctcttccaa 17064513



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 571     ccacagcctccacctcctcc 590
               ||||||||||||||||||||
Sbjct: 8046534 ccacagcctccacctcctcc 8046515



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 571     ccacagcctccacctcctcc 590
               ||||||||||||||||||||
Sbjct: 6337326 ccacagcctccacctcctcc 6337307
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 16279542 ccacagcctccacctcctcc 16279561
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 10058044 ccacagcctccacctcctcc 10058063



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 571     ccacagcctccacctcctcc 590
               ||||||||||||||||||||
Sbjct: 8225321 ccacagcctccacctcctcc 8225302



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 571     ccacagcctccacctcctcc 590
               ||||||||||||||||||||
Sbjct: 7634329 ccacagcctccacctcctcc 7634310
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 19418902 ccacagcctccacctcctcc 19418883
to top
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
              BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 568    cctccacagcctccacctcctccg 591
              ||||||| ||||||||||||||||
Sbjct: 122296 cctccaccgcctccacctcctccg 122273
to top
>gb|AF255649.1|AF255649 Homo sapiens DC28 mRNA, complete cds
          Length = 3374

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 504 ccctccacagccaccacctcctcc 527
to top
>gb|AC016712.6| Homo sapiens BAC clone RP11-266F17 from 2, complete sequence
          Length = 159748

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    aaggcaacaagacaaacagaacatgggt 104
             |||||||||| || ||||||||||||||
Sbjct: 64518 aaggcaacaacaccaacagaacatgggt 64545
to top
>gb|AC021648.25| Homo sapiens 12 BAC RP11-255I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 128809

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   tggaatgaagaaaccaaggg 388
             ||||||||||||||||||||
Sbjct: 99271 tggaatgaagaaaccaaggg 99290
to top
>gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, complete sequence
          Length = 109840

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    ttttctacgaagacagagtt 519
              ||||||||||||||||||||
Sbjct: 101011 ttttctacgaagacagagtt 101030
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 568     cctccacagcctccacctcc 587
               ||||||||||||||||||||
Sbjct: 3787002 cctccacagcctccacctcc 3787021
to top
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0026F02
          Length = 132237

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    ccacagcctccacctcctcc 590
              ||||||||||||||||||||
Sbjct: 104434 ccacagcctccacctcctcc 104453
to top
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1341_A08
          Length = 128955

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 84731 ccacagcctccacctcctcc 84712
to top
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0016H06
          Length = 148158

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    tatatgtatacctcttccaa 420
              ||||||||||||||||||||
Sbjct: 143905 tatatgtatacctcttccaa 143924
to top
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   tatatgtatacctcttccaa 420
             ||||||||||||||||||||
Sbjct: 17620 tatatgtatacctcttccaa 17639
to top
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1116_C08
          Length = 102317

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 87886 ccacagcctccacctcctcc 87867
to top
>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1120_B07
          Length = 118763

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 83817 ccacagcctccacctcctcc 83836
to top
>gb|AY892921.1| Synthetic construct Homo sapiens clone FLH135182.01L
           Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1)
           mRNA, partial cds
          Length = 1938

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 387 ccctccacagccaccacctcctcc 410
to top
>gb|AY892413.1| Synthetic construct Homo sapiens clone FLH014894.01L sorting nexin 9
            (SNX9) mRNA, partial cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1593 acaagacaaacagaacatgg 1612
to top
>gb|AY892412.1| Synthetic construct Homo sapiens clone FLH014893.01L sorting nexin 9
            (SNX9) mRNA, partial cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1593 acaagacaaacagaacatgg 1612
to top
>gb|AY890463.1| Synthetic construct Homo sapiens clone FLH135186.01X
           Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1)
           mRNA, complete cds
          Length = 1938

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 387 ccctccacagccaccacctcctcc 410
to top
>dbj|AK026637.1| Homo sapiens cDNA: FLJ22984 fis, clone KAT11574, highly similar to
            AF121859 Homo sapiens sorting nexin 9 (SNX9) mRNA
          Length = 1699

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1402 acaagacaaacagaacatgg 1421
to top
>emb|AJ295992.1|HSA295992 Homo sapiens mRNA for putative chromatin modulator, alternative
           splice NSD3S
          Length = 3790

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 700 ccctccacagccaccacctcctcc 723
to top
>gb|AF131214.1|AF131214 Homo sapiens SH3 and PX domain-containing protein SH3PX1 (SH3PX1)
            mRNA, complete cds
          Length = 2310

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1636 acaagacaaacagaacatgg 1655
to top
>gb|AC117576.11| Mus musculus chromosome 1, clone RP23-34E15, complete sequence
          Length = 200174

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   atcttcccttttcagctcct 459
             ||||||||||||||||||||
Sbjct: 34195 atcttcccttttcagctcct 34214
to top
>gb|AF076957.1|AF076957 Homo sapiens SDP1 protein mRNA, complete cds
          Length = 1456

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 1077 acaagacaaacagaacatgg 1096
to top
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 568    cctccacagcctccacctcctccg 591
              ||||||| ||||||||||||||||
Sbjct: 228062 cctccaccgcctccacctcctccg 228039
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 17514789 ccacagcctccacctcctcc 17514770



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 15736585 ccacagcctccacctcctcc 15736566
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 571      ccacagcctccacctcctcc 590
                ||||||||||||||||||||
Sbjct: 26821038 ccacagcctccacctcctcc 26821019
to top
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142370

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   ccacagcctccacctcctcc 590
             ||||||||||||||||||||
Sbjct: 96835 ccacagcctccacctcctcc 96816
to top
>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    cctccacagcctccacctcc 587
              ||||||||||||||||||||
Sbjct: 109603 cctccacagcctccacctcc 109622
to top
>gb|AC157952.2| Gallus gallus BAC clone CH261-57A7 from chromosome unknown, complete
              sequence
          Length = 216788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aataaatagctcaaataatc 20
              ||||||||||||||||||||
Sbjct: 107791 aataaatagctcaaataatc 107772
to top
>gb|AC157664.2| Gallus gallus BAC clone CH261-174B17 from chromosome unknown, complete
             sequence
          Length = 214968

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aataaatagctcaaataatc 20
             ||||||||||||||||||||
Sbjct: 53444 aataaatagctcaaataatc 53463
to top
>gb|BC062631.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:5246860), complete cds
          Length = 3055

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 ccctccacagcctccacctcctcc 590
           |||||||||||| |||||||||||
Sbjct: 844 ccctccacagccaccacctcctcc 867
to top
>dbj|AB209736.1| Homo sapiens mRNA for sorting nexin 9 variant protein
          Length = 7717

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   acaagacaaacagaacatgg 102
            ||||||||||||||||||||
Sbjct: 3690 acaagacaaacagaacatgg 3709
to top
>gb|AC087362.13| Homo sapiens chromosome 8, clone RP11-513D5, complete sequence
          Length = 142170

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 567    ccctccacagcctccacctcctcc 590
              |||||||||||| |||||||||||
Sbjct: 107784 ccctccacagccaccacctcctcc 107761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,982,785
Number of Sequences: 3902068
Number of extensions: 8982785
Number of successful extensions: 179951
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 179167
Number of HSP's gapped (non-prelim): 784
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top