ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 1283 0.0
2gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 1045 0.0
3gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 1043 0.0
4gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 815 0.0
5gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 807 0.0
6gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 664 0.0
7gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 577 e-161
8emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 521 e-145
9gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 182 1e-42
10dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 182 1e-42
11gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 182 1e-42
12dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
13dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
14dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
15dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
16dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
17dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 182 1e-42
18dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 182 1e-42
19gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 170 4e-39
20gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 141 4e-30
21gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 141 4e-30
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 141 4e-30
24gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 129 1e-26
25gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 125 2e-25
26gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 121 3e-24
27gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 119 1e-23
28gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c... 111 3e-21
29gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 111 3e-21
30gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 111 3e-21
31ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 107 5e-20
32ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 107 5e-20
33ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 107 5e-20
34gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)... 107 5e-20
35gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730... 107 5e-20
36gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ... 107 5e-20
37gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp... 107 5e-20
38gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl... 107 5e-20
39gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl... 107 5e-20
40gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730... 107 5e-20
41gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se... 107 5e-20
42gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha... 107 5e-20
43gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 101 3e-18
44gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 98 5e-17
45gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 96 2e-16
46gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 96 2e-16
47gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/... 94 7e-16
48gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds 94 7e-16
49gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence 86 2e-13
50emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 80 1e-11
51gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen... 78 4e-11
52dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
53dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
54gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi... 78 4e-11
55gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 76 2e-10
56emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 74 7e-10
57gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen... 72 3e-09
58gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen... 72 3e-09
59gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen... 72 3e-09
60gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen... 72 3e-09
61gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen... 72 3e-09
62gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen... 72 3e-09
63gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen... 72 3e-09
64gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen... 72 3e-09
65gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen... 72 3e-09
66gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen... 72 3e-09
67gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen... 72 3e-09
68gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen... 72 3e-09
69gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen... 72 3e-09
70gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom... 72 3e-09
71emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat... 70 1e-08
72gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph... 68 4e-08
73gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence 66 2e-07
74gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 64 7e-07
75gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur... 64 7e-07
76gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur... 64 7e-07
77gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence 60 1e-05
78gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ... 60 1e-05
79emb|Y10657.1|CLRCAGENE C.littorale rca gene 60 1e-05
80gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car... 60 1e-05
81gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part... 58 4e-05
82gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph... 58 4e-05
83gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1... 56 2e-04
84emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha... 54 6e-04
85emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase 52 0.003
86gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb... 50 0.010
87emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph... 50 0.010
88gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m... 50 0.010
89gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso... 50 0.010
90gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate... 48 0.040
91gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA... 46 0.16
92gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.62
93emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase 44 0.62
94emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c... 44 0.62
95gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp... 42 2.5
96emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 42 2.5
97gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp... 42 2.5
98emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis... 42 2.5
99dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
100gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complet... 42 2.5
101gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
102emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.5
103gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp... 42 2.5
104gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet... 40 9.7
105gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten... 40 9.7
106gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 9.7
107gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx... 40 9.7
108gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ... 40 9.7
109ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (... 40 9.7
110ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 9.7
111emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot... 40 9.7
112gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 9.7
113gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 9.7
114gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 9.7
115gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 9.7
116gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc... 40 9.7
117gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 9.7
118ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 9.7
119gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 9.7
120dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 9.7
121gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten... 40 9.7
122gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 9.7
123gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 9.7
124gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 9.7
125emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 9.7
126gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.7
127gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 9.7
128ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 9.7
129ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot... 40 9.7
130gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 40 9.7
131gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 40 9.7
132gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 9.7

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1283 bits (647), Expect = 0.0
 Identities = 691/699 (98%), Gaps = 5/699 (0%)
 Strand = Plus / Minus

                                                                        
Query: 15   aatgggtatactcaatat-atttagagatatattaacaaaacatgcccagcaatcgcttg 73
            ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 aatgggtatacacaatattatttagagatatattaacaaaacatgcccagcaatcgcttg 1643

                                                                        
Query: 74   gatgcgatgcggacttag-gtaggtaaaacatcagatattaaaagtggcatgcttaaaag 132
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 gatgcgatgcggacttagtgtaggtaaaacatcagatattaaaagtggcatgcttaaaag 1583

                                                                        
Query: 133  gtgtaaaggcagctgccgt-cgtcgctccttgccgttgggtcgtagttcttggcattttg 191
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 gtgtaaaggcagctgccgttcgtcgctccttgccgttgggtcgtagttcttggcattttg 1523

                                                                        
Query: 192  gtcggtgcaaccttccggca-cgggcaaagtaccttgctgtgctcctttacctcctccta 250
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 gtcggtgcaaccttccggcatcgggcaaagtaccttgctgtgctcctttacctcctccta 1463

                                                                        
Query: 251  tgcagcaagagatggtgggtgt-gtatggagaattttctaaccgtagaaggaaccagtct 309
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1462 tgcagcaagagatggtgggtgttgtatggagaattttctaaccgtagaaggaaccagtct 1403

                                                                        
Query: 310  tcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagct 369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 tcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagct 1343

                                                                        
Query: 370  gcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttct 429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 gcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttct 1283

                                                                        
Query: 430  cgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagcctct 489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 cgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagcctct 1223

                                                                        
Query: 490  tgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtacaccc 549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 tgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtacaccc 1163

                                                                        
Query: 550  gagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttga 609
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1162 gagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttta 1103

                                                                        
Query: 610  cgacagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggt 669
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 cgacagactcgtcacagacattgtcggtctggaagatacccttgcagacaccgatacggt 1043

                                                   
Query: 670  cgtcacgggtgggagcccagtagaacttctccatacgac 708
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 cgtcacgggtgggagcccagtagaacttctccatacgac 1004



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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score = 1045 bits (527), Expect = 0.0
 Identities = 656/696 (94%), Gaps = 11/696 (1%)
 Strand = Plus / Minus

                                                                       
Query: 19  ggtatactcaatatatttagagatatattaacaaaacatgcccagcaatcgcttggatgc 78
           |||||||||||||| ||||    |||||||||||||||||||||||||||||||||||||
Sbjct: 764 ggtatactcaatatcttta----tatattaacaaaacatgcccagcaatcgcttggatgc 709

                                                                       
Query: 79  gatgcgg-acttaggta-----ggtaaaacatcagatattaaaagtggcatgcttaaaag 132
           ||||||| |||||||||     | |||||||||||||||||||  |||||||||||||||
Sbjct: 708 gatgcggtacttaggtacaaaggataaaacatcagatattaaat-tggcatgcttaaaag 650

                                                                       
Query: 133 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 192
           ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| | |||
Sbjct: 649 gtgtaaaggcagctgccgtcgtcactcctcgccgttgggtcgaagttcttggcagtctgg 590

                                                                       
Query: 193 tcggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacctcctcctatg 252
           |||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 589 tcggtgcatcctgccggtacaggcaaagtaccttgctgtgcccctttacctcctcctatg 530

                                                                       
Query: 253 cagcaagagatggtgggtgtgtatggagaattttctaaccgtagaaggaaccagtcttca 312
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 529 cagcaagagatggtgggtgtgtatggagaatgttctaaccgtagaaggtaccagtcttca 470

                                                                       
Query: 313 tcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgca 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgca 410

                                                                       
Query: 373 cacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcga 432
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 409 cacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcca 350

                                                                       
Query: 433 ctgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgc 492
           ||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||
Sbjct: 349 ctgtcatctttggctgctcaaaggtcactggtccgtcccgcgagttcaccagcttcttgc 290

                                                                       
Query: 493 caatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtacacccgag 552
           ||||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||
Sbjct: 289 caatgttctcgataccggtagaggtcacccacttgcgcacctcgtcgtcgtacacccgag 230

                                                                       
Query: 553 cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 612
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cacgcagagcaccgaaaaagtcgatggattgtcctgggaaggtgtcgacgatcttgacga 170

                                                                       
Query: 613 cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 672
           | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cggactcgtcgctgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 110

                                               
Query: 673 cacgggtgggagcccagtagaacttctccatacgac 708
           | ||||||||||||||||||||||||||||||||||
Sbjct: 109 cgcgggtgggagcccagtagaacttctccatacgac 74



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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 1043 bits (526), Expect = 0.0
 Identities = 639/674 (94%), Gaps = 7/674 (1%)
 Strand = Plus / Minus

                                                                        
Query: 41   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 94
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 95   ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 154
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 155  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 214
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                                                        
Query: 215  gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 274
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 1358

                                                                        
Query: 275  atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 334
            ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1357 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 1298

                                                                        
Query: 335  cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 1238

                                                                        
Query: 395  ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 454
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 1237 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 1178

                                                                        
Query: 455  ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 514
            |||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1177 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 1118

                                                                        
Query: 515  gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 574
            |   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 ggtcacccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtc 1058

                                                                        
Query: 575  aatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtc 634
             |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 1057 gatggattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtc 998

                                                                        
Query: 635  ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 694
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 997  ggtctggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaa 938

                          
Query: 695  cttctccatacgac 708
            ||||||||||||||
Sbjct: 937  cttctccatacgac 924



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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  815 bits (411), Expect = 0.0
 Identities = 417/419 (99%)
 Strand = Plus / Minus

                                                                        
Query: 290  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108

                                                                        
Query: 350  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048

                                                                        
Query: 410  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 988

                                                                        
Query: 470  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 928

                                                                        
Query: 530  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 868

                                                                        
Query: 590  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 649
            |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 867  gaaggtgtcgacgatctttacgacagactcgtcacagacattgtcggtctggaagatacc 808

                                                                       
Query: 650  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 749



 Score =  444 bits (224), Expect = e-121
 Identities = 227/228 (99%)
 Strand = Plus / Minus

                                                                        
Query: 15   aatgggtatactcaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 74
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 aatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 1333

                                                                        
Query: 75   atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 1273

                                                                        
Query: 135  gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 1213

                                                            
Query: 195  ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 242
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 1165



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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  807 bits (407), Expect = 0.0
 Identities = 600/661 (90%), Gaps = 9/661 (1%)
 Strand = Plus / Minus

                                                                        
Query: 55   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 108
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 109  -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 167
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 168  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 227
            ||||||| ||||||||||||   ||||||| |||||||||||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                                                                        
Query: 228  ctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaattttc 287
             ||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||
Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgggtgt--atgaagagtgttc 1356

                                                                        
Query: 288  taaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 347
            |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296

                                                                        
Query: 348  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatg 407
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatg 1236

                                                                        
Query: 408  tgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccg 467
            || |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||
Sbjct: 1235 tggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccg 1176

                                                                        
Query: 468  tcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttg 527
            |||||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||
Sbjct: 1175 tcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttg 1116

                                                                        
Query: 528  cgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcct 587
            ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1115 cgcacctcaacgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcct 1056

                                                                        
Query: 588  gggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagata 647
            ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1055 gggaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagata 996

                                                                        
Query: 648  cccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacga 707
            ||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 995  cccttgcagacgccgatacggtcctcgcgggtgggcgcccagtagaacttctccatacga 936

             
Query: 708  c 708
            |
Sbjct: 935  c 935



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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  664 bits (335), Expect = 0.0
 Identities = 335/335 (100%)
 Strand = Plus / Minus

                                                                        
Query: 240  acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296

                                                                        
Query: 300  gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236

                                                                        
Query: 360  tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176

                                                                        
Query: 420  agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 7116

                                                                        
Query: 480  accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7115 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 7056

                                               
Query: 540  tcgtacacccgagcacgcagagcaccgaaaaagtc 574
            |||||||||||||||||||||||||||||||||||
Sbjct: 7055 tcgtacacccgagcacgcagagcaccgaaaaagtc 7021



 Score =  462 bits (233), Expect = e-127
 Identities = 243/245 (99%), Gaps = 1/245 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tattggtctttgccaa-tgggtatactcaatatatttagagatatattaacaaaacatgc 59
            |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7767 tattggtctttgccaaatgggtatacacaatatatttagagatatattaacaaaacatgc 7708

                                                                        
Query: 60   ccagcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaaaagtg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7707 ccagcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaaaagtg 7648

                                                                        
Query: 120  gcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagtt 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7647 gcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagtt 7588

                                                                        
Query: 180  cttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgctccttt 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7587 cttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgctccttt 7528

                 
Query: 240  acctc 244
            |||||
Sbjct: 7527 acctc 7523



 Score =  268 bits (135), Expect = 2e-68
 Identities = 135/135 (100%)
 Strand = Plus / Minus

                                                                        
Query: 574  caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 6821

                                                                        
Query: 634  cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 693
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6820 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 6761

                           
Query: 694  acttctccatacgac 708
            |||||||||||||||
Sbjct: 6760 acttctccatacgac 6746



 Score =  129 bits (65), Expect = 1e-26
 Identities = 158/189 (83%)
 Strand = Plus / Minus

                                                                        
Query: 515  gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 574
            ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| |||||
Sbjct: 3812 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 3753

                                                                        
Query: 575  aatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtc 634
             ||||| || || ||||||||||| || | | | || || | ||||||   ||| |||||
Sbjct: 3752 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 3693

                                                                        
Query: 635  ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 694
            |||  ||||||| |||||||| || ||||| ||||| || |||||||| |||||||||||
Sbjct: 3692 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 3633

                     
Query: 695  cttctccat 703
            |||||||||
Sbjct: 3632 cttctccat 3624



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 366  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 425
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 426  ttctcgactgtcatctttggctgctcgaa 454
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873



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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  577 bits (291), Expect = e-161
 Identities = 387/419 (92%)
 Strand = Plus / Minus

                                                                        
Query: 290  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 349
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304

                                                                        
Query: 350  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 409
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244

                                                                        
Query: 410  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 469
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1184

                                                                        
Query: 470  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 529
            |||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||||
Sbjct: 1183 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1124

                                                                        
Query: 530  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 589
            |||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1123 cacctcgtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcctgg 1064

                                                                        
Query: 590  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 649
            ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1063 gaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagatacc 1004

                                                                       
Query: 650  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
            ||||||||| ||||||||||| || |||||||| |||||||| ||||||||||||||||
Sbjct: 1003 cttgcagacgccgatacggtcctcgcgggtgggcgcccagtaaaacttctccatacgac 945



 Score =  176 bits (89), Expect = 6e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                        
Query: 114  aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 173
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 174  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 233
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                     
Query: 234  tcctttacc 242
            |||||||||
Sbjct: 1369 tcctttacc 1361



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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  521 bits (263), Expect = e-145
 Identities = 296/307 (96%)
 Strand = Plus / Minus

                                                                       
Query: 268 ggtgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 327
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249

                                                                       
Query: 328 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 189

                                                                       
Query: 388 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 447
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 129

                                                                       
Query: 448 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 507
           |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||||||| |
Sbjct: 128 gctcaaaggtcactggtccgtcccgcgagttcacaagcttcttgccaatgttctcgatac 69

                                                                       
Query: 508 cggtagagccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccga 567
           ||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 68  cggtagaggtcacccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccga 9

                  
Query: 568 aaaagtc 574
           |||||||
Sbjct: 8   aaaagtc 2



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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1086 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1027

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1026 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 967

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 966  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 907

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 906  tccatacg 899



 Score =  133 bits (67), Expect = 9e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 183  ggcattttggtcggtgcaaccttccggcacgggca 217
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257

                                                                        
Query: 349  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197

                                                                        
Query: 409  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1137

                                              
Query: 469  cccgcgagttcaccagcctcttgccaatgttctc 502
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1136 ccctcgagttcaccagcctcttgccaatgttctc 1103



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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1081 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1022

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1021 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 962

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 961  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 902

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 901  tccatacg 894



 Score =  133 bits (67), Expect = 9e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                               
Query: 183  ggcattttggtcggtgcaaccttccggcacgggca 217
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 350
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 351  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 410
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                                        
Query: 411  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 470
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130

                                            
Query: 471  cgcgagttcaccagcctcttgccaatgttctc 502
            | ||||||||||||||||||||||||||||||
Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctc 1098



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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                       
Query: 519 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
           ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 335 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 276

                                                                       
Query: 579 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
           ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 275 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 216

                                                                       
Query: 639 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
            ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 215 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 156

                   
Query: 699 tccatacg 706
           ||||||||
Sbjct: 155 tccatacg 148



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                       
Query: 289 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
           ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506

                                                                       
Query: 349 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
           ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446

                                                                       
Query: 409 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 386

                                             
Query: 469 cccgcgagttcaccagcctcttgccaatgttctc 502
           ||| ||||||||||||||||||||||||||||||
Sbjct: 385 ccctcgagttcaccagcctcttgccaatgttctc 352



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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1129 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1070

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1069 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1010

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 1009 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 950

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 949  tccatacg 942



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300

                                                                        
Query: 349  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240

                                                                        
Query: 409  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1180

                                              
Query: 469  cccgcgagttcaccagcctcttgccaatgttctc 502
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1179 ccctcgagttcaccagcctcttgccaatgttctc 1146



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/130 (87%), Gaps = 4/130 (3%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                                                        
Query: 183  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 239
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444

                      
Query: 240  acctcctcct 249
             |||||||||
Sbjct: 1443 ccctcctcct 1434



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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1080 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1021

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1020 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 961

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 960  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 901

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 900  tccatacg 893



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                                                        
Query: 183  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 239
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395

                      
Query: 240  acctcctcct 249
             |||||||||
Sbjct: 1394 ccctcctcct 1385



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251

                                                                        
Query: 349  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191

                                                                        
Query: 409  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1131

                                              
Query: 469  cccgcgagttcaccagcctcttgccaatgttctc 502
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1130 ccctcgagttcaccagcctcttgccaatgttctc 1097



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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1118 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1059

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1058 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 999

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 998  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 939

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 938  tccatacg 931



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                                                        
Query: 183  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 239
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433

                      
Query: 240  acctcctcct 249
             |||||||||
Sbjct: 1432 ccctcctcct 1423



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289

                                                                        
Query: 349  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229

                                                                        
Query: 409  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1169

                                              
Query: 469  cccgcgagttcaccagcctcttgccaatgttctc 502
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1168 ccctcgagttcaccagcctcttgccaatgttctc 1135



to top

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1117 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1058

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1057 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 998

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 997  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 938

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 937  tccatacg 930



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                                                        
Query: 183  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 239
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432

                      
Query: 240  acctcctcct 249
             |||||||||
Sbjct: 1431 ccctcctcct 1422



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288

                                                                        
Query: 349  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228

                                                                        
Query: 409  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1168

                                              
Query: 469  cccgcgagttcaccagcctcttgccaatgttctc 502
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1167 ccctcgagttcaccagcctcttgccaatgttctc 1134



to top

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                       
Query: 519 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
           ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 901 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 842

                                                                       
Query: 579 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
           ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 841 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 782

                                                                       
Query: 639 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
            ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 781 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 722

                   
Query: 699 tccatacg 706
           ||||||||
Sbjct: 721 tccatacg 714



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                                                        
Query: 183  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 239
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216

                      
Query: 240  acctcctcct 249
             |||||||||
Sbjct: 1215 ccctcctcct 1206



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072

                                                                        
Query: 349  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012

                                                                        
Query: 409  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 952

                                              
Query: 469  cccgcgagttcaccagcctcttgccaatgttctc 502
            ||| ||||||||||||||||||||||||||||||
Sbjct: 951  ccctcgagttcaccagcctcttgccaatgttctc 918



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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1122 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1063

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1062 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1003

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 1002 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 943

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 942  tccatacg 935



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                                                        
Query: 183  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 239
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437

                      
Query: 240  acctcctcct 249
             |||||||||
Sbjct: 1436 ccctcctcct 1427



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 348
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293

                                                                        
Query: 349  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 408
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233

                                                                        
Query: 409  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 468
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1173

                                              
Query: 469  cccgcgagttcaccagcctcttgccaatgttctc 502
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1172 ccctcgagttcaccagcctcttgccaatgttctc 1139



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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  182 bits (92), Expect = 1e-42
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1116 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1057

                                                                        
Query: 579  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 638
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1056 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 997

                                                                        
Query: 639  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 698
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 996  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 937

                    
Query: 699  tccatacg 706
            ||||||||
Sbjct: 936  tccatacg 929



 Score =  133 bits (67), Expect = 9e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 123  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                               
Query: 183  ggcattttggtcggtgcaaccttccggcacgggca 217
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 350
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 351  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 410
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                                        
Query: 411  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 470
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165

                                            
Query: 471  cgcgagttcaccagcctcttgccaatgttctc 502
            | ||||||||||||||||||||||||||||||
Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctc 1133



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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  170 bits (86), Expect = 4e-39
 Identities = 275/338 (81%)
 Strand = Plus / Minus

                                                                        
Query: 366  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 425
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                                                        
Query: 426  ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 485
            |||||||  |||||||| ||||| ||||| |||   ||||| ||||  ||||| || |||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123

                                                                        
Query: 486  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 545
            | ||||   ||||||||||  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 1063

                                                                        
Query: 546  acccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatc 605
            ||||| || ||||| || ||||| ||||| ||||| || || ||||||||||| || | |
Sbjct: 1062 acccgcgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 1003

                                                                        
Query: 606  ttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgata 665
             | || || | ||||||   ||| ||||||||  ||||||| |||||||| || ||||| 
Sbjct: 1002 ctcaccacggcctcgtcggggacgttgtcggtgcggaagatgcccttgcacacgccgatg 943

                                                  
Query: 666  cggtcgtcacgggtgggagcccagtagaacttctccat 703
            ||||| || |||||||| ||||||||||||||||||||
Sbjct: 942  cggtcctcccgggtgggcgcccagtagaacttctccat 905



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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  141 bits (71), Expect = 4e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                          
Query: 576    atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 635
              |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 108688 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 108747

                                                                          
Query: 636    gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 695
              ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 108748 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 108807

                         
Query: 696    ttctccatacg 706
              |||||||||||
Sbjct: 108808 ttctccatacg 108818



 Score =  133 bits (67), Expect = 9e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 123    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 183    ggcattttggtcggtgcaaccttccggcacgggca 217
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                          
Query: 286    tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 345
              |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365

                                                                          
Query: 346    ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 405
               ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425

                                                                          
Query: 406    tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 465
              |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 108485

                                                   
Query: 466    cgtcccgcgagttcaccagcctcttgccaatgttctc 502
              | |||| ||||||||||||||||||||||||||||||
Sbjct: 108486 cctccctcgagttcaccagcctcttgccaatgttctc 108522



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 640    ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
              ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 112456 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 112515

                  
Query: 700    ccat 703
              ||||
Sbjct: 112516 ccat 112519



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 141    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 200
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 201    accttccggcacggg 215
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 519    acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 568
              ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 108539 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 108588



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 474    gagttcaccagcctcttgccaatgttctc 502
              ||||||||||||||| |||| ||||||||
Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352



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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  141 bits (71), Expect = 4e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                         
Query: 576   atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 635
             |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 30565 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 30624

                                                                         
Query: 636   gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 695
             ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 30625 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 30684

                        
Query: 696   ttctccatacg 706
             |||||||||||
Sbjct: 30685 ttctccatacg 30695



 Score =  133 bits (67), Expect = 9e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 123   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 183   ggcattttggtcggtgcaaccttccggcacgggca 217
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                         
Query: 286   tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 345
             |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242

                                                                         
Query: 346   ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 405
              ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302

                                                                         
Query: 406   tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 465
             |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 30362

                                                  
Query: 466   cgtcccgcgagttcaccagcctcttgccaatgttctc 502
             | |||| ||||||||||||||||||||||||||||||
Sbjct: 30363 cctccctcgagttcaccagcctcttgccaatgttctc 30399



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 640   ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
             ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 34333 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 34392

                 
Query: 700   ccat 703
             ||||
Sbjct: 34393 ccat 34396



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 141   gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 200
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 201   accttccggcacggg 215
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 519   acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 568
             ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 30416 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 30465



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 474   gagttcaccagcctcttgccaatgttctc 502
             ||||||||||||||| |||| ||||||||
Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  141 bits (71), Expect = 4e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                            
Query: 576      atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 635
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28303827 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28303886

                                                                            
Query: 636      gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 695
                ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 28303887 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28303946

                           
Query: 696      ttctccatacg 706
                |||||||||||
Sbjct: 28303947 ttctccatacg 28303957



 Score =  133 bits (67), Expect = 9e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 123      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 183      ggcattttggtcggtgcaaccttccggcacgggca 217
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 286      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 345
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504

                                                                            
Query: 346      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 405
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564

                                                                            
Query: 406      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 465
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28303624

                                                     
Query: 466      cgtcccgcgagttcaccagcctcttgccaatgttctc 502
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28303625 cctccctcgagttcaccagcctcttgccaatgttctc 28303661



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 640      ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
                ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 28307595 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28307654

                    
Query: 700      ccat 703
                ||||
Sbjct: 28307655 ccat 28307658



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 141      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 200
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 201      accttccggcacggg 215
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 519      acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 568
                ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 28303678 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28303727



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 474      gagttcaccagcctcttgccaatgttctc 502
                ||||||||||||||| |||| ||||||||
Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  141 bits (71), Expect = 4e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                            
Query: 576      atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 635
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28286276 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28286335

                                                                            
Query: 636      gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 695
                ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 28286336 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28286395

                           
Query: 696      ttctccatacg 706
                |||||||||||
Sbjct: 28286396 ttctccatacg 28286406



 Score =  133 bits (67), Expect = 9e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 123      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 183      ggcattttggtcggtgcaaccttccggcacgggca 217
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 286      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 345
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953

                                                                            
Query: 346      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 405
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013

                                                                            
Query: 406      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 465
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28286073

                                                     
Query: 466      cgtcccgcgagttcaccagcctcttgccaatgttctc 502
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28286074 cctccctcgagttcaccagcctcttgccaatgttctc 28286110



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 640      ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
                ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 28290044 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28290103

                    
Query: 700      ccat 703
                ||||
Sbjct: 28290104 ccat 28290107



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 141      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 200
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 201      accttccggcacggg 215
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 519      acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 568
                ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 28286127 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28286176



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 474      gagttcaccagcctcttgccaatgttctc 502
                ||||||||||||||| |||| ||||||||
Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940



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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  129 bits (65), Expect = 1e-26
 Identities = 158/189 (83%)
 Strand = Plus / Minus

                                                                        
Query: 515  gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 574
            ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| |||||
Sbjct: 1243 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 1184

                                                                        
Query: 575  aatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtc 634
             ||||| || || ||||||||||| || | | | || || | ||||||   ||| |||||
Sbjct: 1183 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 1124

                                                                        
Query: 635  ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 694
            |||  ||||||| |||||||| || ||||| ||||| || |||||||| |||||||||||
Sbjct: 1123 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 1064

                     
Query: 695  cttctccat 703
            |||||||||
Sbjct: 1063 cttctccat 1055



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 366  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 425
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 426  ttctcgactgtcatctttggctgctcgaa 454
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304



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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Minus

                                                                        
Query: 287  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 346
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948

                                                                        
Query: 347  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 406
            ||||| |||  |||| || |||||||| | ||| || || ||||||||||| || |||||
Sbjct: 947  gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888

                                                                        
Query: 407  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 466
            ||  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 887  gttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 828

                                       
Query: 467  gtcccgcgagttcaccagcctcttgcc 493
             ||| ||||||||||||||||||||||
Sbjct: 827  ctccagcgagttcaccagcctcttgcc 801



 Score =  111 bits (56), Expect = 3e-21
 Identities = 155/188 (82%)
 Strand = Plus / Minus

                                                                       
Query: 521 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 580
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 773 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 714

                                                                       
Query: 581 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 640
           ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 713 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 654

                                                                       
Query: 641 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
           |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 653 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 594

                   
Query: 701 catacgac 708
           ||||||||
Sbjct: 593 catacgac 586



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 133  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 192
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 193  tcggtgcaaccttc 206
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076



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>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 129 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 188
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 189 ttggtcggtgcaaccttccggcacgggca 217
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5



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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 294  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 353
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 354  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 413
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 414  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 473
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                                
Query: 474  gagttcaccagcctcttgcc 493
            ||||||||||||||||||||
Sbjct: 1014 gagttcaccagcctcttgcc 995



 Score =  111 bits (56), Expect = 3e-21
 Identities = 155/188 (82%)
 Strand = Plus / Minus

                                                                       
Query: 521 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 580
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 967 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 908

                                                                       
Query: 581 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 640
           ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 907 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 848

                                                                       
Query: 641 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
           |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 847 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 788

                   
Query: 701 catacgac 708
           ||||||||
Sbjct: 787 catacgac 780



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 133  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 192
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 193  tcggtgcaaccttc 206
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232



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>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  111 bits (56), Expect = 3e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 561  gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 620
            |||||||| || ||||| ||||| || |||||||||||||||| |||||| ||    || 
Sbjct: 1164 gcaccgaagaaatcaatagattggccagggaaggtgtcgacgagcttgacaacgtggtcc 1105

                                                                        
Query: 621  tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 680
            |||   ||||||||||||  |||||||||  ||   |||||||||||||| |||||||||
Sbjct: 1104 tcaggaacattgtcggtcctgaagataccggtggcaacaccgatacggtcctcacgggtg 1045

                                        
Query: 681  ggagcccagtagaacttctccatacgac 708
            ||||||||||||||||||||||||||||
Sbjct: 1044 ggagcccagtagaacttctccatacgac 1017



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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  111 bits (56), Expect = 3e-21
 Identities = 155/188 (82%)
 Strand = Plus / Minus

                                                                        
Query: 521  ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 580
            |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 1074 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 1015

                                                                        
Query: 581  ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 640
            ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 1014 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 955

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 954  gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 895

                    
Query: 701  catacgac 708
            ||||||||
Sbjct: 894  catacgac 887



 Score =  103 bits (52), Expect = 8e-19
 Identities = 166/204 (81%)
 Strand = Plus / Minus

                                                                        
Query: 287  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 346
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1308 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 1249

                                                                        
Query: 347  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 406
            ||||| |||  |||| || |||||||| | ||| || || ||||| ||||| || |||||
Sbjct: 1248 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcat 1189

                                                                        
Query: 407  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 466
             |  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 1188 attgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 1129

                                    
Query: 467  gtcccgcgagttcaccagcctctt 490
             ||| |||||||||||||||||||
Sbjct: 1128 ctccagcgagttcaccagcctctt 1105



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 133  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 192
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 193  tcggtgcaaccttc 206
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377



to top

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  111 bits (56), Expect = 3e-21
 Identities = 155/188 (82%)
 Strand = Plus / Minus

                                                                       
Query: 521 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 580
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 937 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 878

                                                                       
Query: 581 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 640
           ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 877 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 818

                                                                       
Query: 641 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
           |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 817 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 758

                   
Query: 701 catacgac 708
           ||||||||
Sbjct: 757 catacgac 750



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 294  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 353
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 354  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 413
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 414  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 473
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                             
Query: 474  gagttcaccagcctctt 490
            |||||||||||||||||
Sbjct: 984  gagttcaccagcctctt 968



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 133  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 192
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 193  tcggtgcaaccttc 206
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202



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>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075

                  
Query: 701  catacg 706
            ||||||
Sbjct: 1074 catacg 1069



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>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075

                  
Query: 701  catacg 706
            ||||||
Sbjct: 1074 catacg 1069



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>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104

                  
Query: 701  catacg 706
            ||||||
Sbjct: 1103 catacg 1098



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>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986

                  
Query: 701  catacg 706
            ||||||
Sbjct: 985  catacg 980



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>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                       
Query: 641 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
           |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 960 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 901

                 
Query: 701 catacg 706
           ||||||
Sbjct: 900 catacg 895



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>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Plus

                                                                         
Query: 641   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
             |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 14154 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 14213

                   
Query: 701   catacg 706
             ||||||
Sbjct: 14214 catacg 14219



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>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989

                  
Query: 701  catacg 706
            ||||||
Sbjct: 988  catacg 983



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>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1037 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 978

                  
Query: 701  catacg 706
            ||||||
Sbjct: 977  catacg 972



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>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986

                  
Query: 701  catacg 706
            ||||||
Sbjct: 985  catacg 980



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>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989

                  
Query: 701  catacg 706
            ||||||
Sbjct: 988  catacg 983



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>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104

                  
Query: 701  catacg 706
            ||||||
Sbjct: 1103 catacg 1098



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>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3129 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 3070

                  
Query: 701  catacg 706
            ||||||
Sbjct: 3069 catacg 3064



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>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 123 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 183 ggcattttggtcggtgcaaccttccggcacgggca 217
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41



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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 142/173 (82%)
 Strand = Plus / Minus

                                                                       
Query: 531 acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 590
           ||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| || || |||
Sbjct: 683 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaagtcgatggactggccaggg 624

                                                                       
Query: 591 aaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagataccc 650
           ||||||||||| | || ||||||   ||| ||   |||   ||||||  ||||||| |||
Sbjct: 623 aaggtgtcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgccc 564

                                                                
Query: 651 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 703
           |||||||| ||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 563 ttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 511



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 295 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 354
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 355 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 414
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 415 actctagcagcttctcgactgtcatctttggctgctcgaa 454
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760



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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 295  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 354
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 355  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 414
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 415  actctagcagcttctcgactgtcatctttggctgctcgaa 454
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 590
            ||||| |||||||| ||||| |||||||| || ||||| || || ||||| || || |||
Sbjct: 1078 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaaatcgatggactggccaggg 1019

                                                                        
Query: 591  aaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagataccc 650
            ||||||||||| | || ||||||   ||| ||   |||   ||||||  ||||||| |||
Sbjct: 1018 aaggtgtcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgccc 959

                                                                 
Query: 651  ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 703
            |||||||| ||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 958  ttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 906



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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 295  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 354
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 355  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 414
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 415  actctagcagcttctcgactgtcatctttggctgctcgaa 454
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 969 ggaagatgcccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 910

               
Query: 700 ccat 703
           ||||
Sbjct: 909 ccat 906



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>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                   
Query: 654  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
            |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2813 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgac 2759



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>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                   
Query: 654  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
            |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1185 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgac 1131



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                        
Query: 534  tcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaag 593
            ||||||||||| || ||||| | ||  || ||||||||||| || |||||||| ||||||
Sbjct: 1305 tcatcgtcgtatacacgagccctcaacgctccgaaaaagtcgatagattgtccagggaag 1246

                      
Query: 594  gtgtcgacga 603
            | ||| ||||
Sbjct: 1245 gcgtcaacga 1236



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>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 136/167 (81%)
 Strand = Plus / Minus

                                                                       
Query: 537 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 596
           |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| |
Sbjct: 618 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 559

                                                                       
Query: 597 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 656
           ||||||| || ||||||   ||||||   |||   ||||||  ||||||| |||||||| 
Sbjct: 558 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 499

                                                          
Query: 657 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 703
           || ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 498 acgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccat 452



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>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 312 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 371
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 372 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 427
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3



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>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 135/167 (80%)
 Strand = Plus / Minus

                                                                       
Query: 537 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 596
           |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| |
Sbjct: 626 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 567

                                                                       
Query: 597 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 656
           ||||||| || ||||||   ||||||   |||   ||||||  ||||||| |||||||| 
Sbjct: 566 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 507

                                                          
Query: 657 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 703
           || ||||| ||||| || |||||||| |||||||||||||| |||||
Sbjct: 506 acgccgatgcggtcctcccgggtgggcgcccagtagaacttgtccat 460



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 123     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 183     ggcattttggtcggtgcaaccttccggcacgggca 217
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319



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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 123   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 182
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 183   ggcattttggtcggtgcaaccttccggcacgggca 217
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693



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>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 626 gacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagc 685
           ||||||||| |||  |||||||||  |||| ||||| |||||||| ||||| ||||| ||
Sbjct: 248 gacattgtcagtcctgaagataccagtgcaaacaccaatacggtcctcacgagtgggtgc 189

                                  
Query: 686 ccagtagaacttctccatacgac 708
           ||||||||| |||||||||||||
Sbjct: 188 ccagtagaatttctccatacgac 166



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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                        
Query: 627  acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 686
            |||||||| |||  ||| ||||||||||||||||| |||||||| || | ||| ||||||
Sbjct: 1043 acattgtcagtcctgaaaatacccttgcagacaccaatacggtcttccctggtaggagcc 984

                                  
Query: 687  cagtagaacttctccatacgac 708
            |||||||| || ||||||||||
Sbjct: 983  cagtagaatttttccatacgac 962



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 315  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 364
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306



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>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 652  tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
            ||||||| || ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 1034 tgcagactccaatacgatcttcgcgggtgggagcccagtagaacttctccatacgac 978



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 323  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 382
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 383  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 442
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 443  tggctgctcgaa 454
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                        
Query: 521  ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 580
            |||||| | ||| ||||||||||| |||| ||| | ||  ||||| || || ||||| ||
Sbjct: 1165 ccacttcctcacttcatcgtcgtaaaccctagccctcaaggcaccaaagaaatcaataga 1106

                              
Query: 581  ttgtcctgggaaggtgtc 598
            ||| ||||||||||||||
Sbjct: 1105 ttggcctgggaaggtgtc 1088



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>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474

               
Query: 700 ccat 703
           ||||
Sbjct: 473 ccat 470



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>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

               
Query: 700 ccat 703
           ||||
Sbjct: 469 ccat 466



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>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 700 ccat 703
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 700 ccat 703
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476

               
Query: 700 ccat 703
           ||||
Sbjct: 475 ccat 472



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>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

               
Query: 700 ccat 703
           ||||
Sbjct: 469 ccat 466



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>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 700 ccat 703
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

               
Query: 700 ccat 703
           ||||
Sbjct: 469 ccat 466



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>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 700 ccat 703
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 700 ccat 703
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 700 ccat 703
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474

               
Query: 700 ccat 703
           ||||
Sbjct: 473 ccat 470



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>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 700 ccat 703
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 640 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 699
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476

               
Query: 700 ccat 703
           ||||
Sbjct: 475 ccat 472



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>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 143/179 (79%)
 Strand = Plus / Minus

                                                                       
Query: 530 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 589
           ||||||||| ||||| || || || | ||||||||| || |||||||| |||||||| ||
Sbjct: 462 cacctcatcatcgtatactcgtgccctcagagcaccaaagaagtcaatagattgtccagg 403

                                                                       
Query: 590 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 649
           |||||| ||||| ||||| || ||||  || |||   || |||||||||  ||| |||||
Sbjct: 402 gaaggtatcgacaatctttacaacagcttcctcaggcacgttgtcggtcctgaaaatacc 343

                                                                      
Query: 650 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
           |||||| ||||| || |  || || |  || || ||||| |||||||||||||||||||
Sbjct: 342 cttgcaaacaccaattctatcttccctagttggtgcccaatagaacttctccatacgac 284



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>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 557  cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 598
            ||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1113 cagagcaccgaaaaagtcaatggattggcccgggaaggtgtc 1072



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 627  acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 686
            ||||||||||||  ||| |||||  |||| |||||||| |  || || | |||||| |||
Sbjct: 1043 acattgtcggtcctgaaaatacctgtgcaaacaccgatcctatcttccctggtgggtgcc 984

                                  
Query: 687  cagtagaacttctccatacgac 708
            ||||| ||||||||||||||||
Sbjct: 983  cagtaaaacttctccatacgac 962



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>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 652 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
           |||||||||| ||||| ||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 143 tgcagacaccaatacgatcgtcgcgggttggtgcccagtagaatttctccatacgac 87



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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 651  ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacg 706
            ||||||||||| |||||||| || | |||||| ||||||||||| |||||||||||
Sbjct: 1019 ttgcagacaccaatacggtcctccctggtgggtgcccagtagaatttctccatacg 964



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 324  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 383
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 384  ttgtcctgctcctggacgagcatg 407
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263



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>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 641 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
           |||||||||  |||||||||| || ||||| || | |||||| ||||||||||| |||||
Sbjct: 872 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 813

                   
Query: 701 catacgac 708
           ||||||||
Sbjct: 812 catacgac 805



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>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 641  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 700
            |||||||||  |||||||||| || ||||| || | |||||| ||||||||||| |||||
Sbjct: 1045 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 986

                    
Query: 701  catacgac 708
            ||||||||
Sbjct: 985  catacgac 978



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>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 557  cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 610
            |||||||||||| || ||||| |||||||| |||||| | ||||||||||||||
Sbjct: 1126 cagagcaccgaagaaatcaatagattgtccagggaagctatcgacgatcttgac 1073



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 684 gcccagtagaacttctccatacgac 708
           ||||||||||| |||||||||||||
Sbjct: 999 gcccagtagaatttctccatacgac 975



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>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 537  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 596
            ||||||||||| || |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 2723 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 2664

              
Query: 597  tc 598
            ||
Sbjct: 2663 tc 2662



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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 638  ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 697
            ||||||||| ||| ||||||| ||||| ||||| |||||||||||   ||||||| ||||
Sbjct: 1861 ctggaagattcccatgcagacgccgatgcggtcctcacgggtggggttccagtagtactt 1802

                  
Query: 698  ctccat 703
            ||||||
Sbjct: 1801 ctccat 1796



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 366  agctgcacacgcttgacattgtcctgctc 394
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105



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>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 537  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 596
            ||||||||||| || |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 1033 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 974

              
Query: 597  tc 598
            ||
Sbjct: 973  tc 972



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>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 652 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
           |||||||||| ||||| || || |  || ||||||||||||||||||||||||||||
Sbjct: 456 tgcagacaccaatacgatcttctctagtaggagcccagtagaacttctccatacgac 400



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 519 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 578
           |||||||| | ||| ||||| |||||||| | ||| | ||  |||||||| || || |||
Sbjct: 589 acccacttcctcacttcatcatcgtacactctagccctcaatgcaccgaagaaatcgatg 530

                                           
Query: 579 gattgtcctgggaaggtgtcgacgatcttgac 610
           ||||| || ||||||||||| || ||||||||
Sbjct: 529 gattggccagggaaggtgtcaacaatcttgac 498



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>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 632 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 691
           |||||||  ||| ||||| ||||| ||||||||||||||||| |  || || ||||||||
Sbjct: 853 gtcggtcctgaaaatacctttgcaaacaccgatacggtcgtccctagttggtgcccagta 794

                            
Query: 692 gaacttctccatacgac 708
            || |||||||||||||
Sbjct: 793 aaatttctccatacgac 777



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 540 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 599
           ||||| |||||||| | ||  |||||||| || || |||||||| || ||||||||||||
Sbjct: 945 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 886

               
Query: 600 acga 603
           ||||
Sbjct: 885 acga 882



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>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                        
Query: 633  tcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtag 692
            |||||| |||| || |||||||| ||||| || ||||| || |  || || |||||||||
Sbjct: 1042 tcggtccggaaaattcccttgcaaacaccaatgcggtcttcccttgttggtgcccagtag 983

                            
Query: 693  aacttctccatacgac 708
            ||||||||||||||||
Sbjct: 982  aacttctccatacgac 967



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>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 141/179 (78%)
 Strand = Plus / Minus

                                                                        
Query: 530  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 589
            ||||||||| ||||| || || || | ||||||||| || |||||||| |||||||| ||
Sbjct: 1106 cacctcatcatcgtatactcgtgccctcagagcaccaaagaagtcaatagattgtccagg 1047

                                                                        
Query: 590  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 649
            |||||| ||||| ||||| |  || |  || |||   || |||||||||  ||| |||||
Sbjct: 1046 gaaggtatcgacaatctttataacggcttcctcaggcacgttgtcggtcctgaaaatacc 987

                                                                       
Query: 650  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 708
            |||||| ||||| || |  || || |  || || ||||| |||||||||||||||||||
Sbjct: 986  cttgcaaacaccaattctatcttccctagttggtgcccaatagaacttctccatacgac 928



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>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 520  cccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgg 579
            ||||||| | ||| |||||||| || || ||||| | || |||||| || ||||| || |
Sbjct: 1161 cccactttctcacttcatcgtcataaactcgagctctcaaagcaccaaagaagtctattg 1102

                                  
Query: 580  attgtcctgggaaggtgtcgac 601
            | ||||||||||||||||||||
Sbjct: 1101 actgtcctgggaaggtgtcgac 1080



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>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 632 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 691
           |||||||  ||| ||||| ||||| ||||||| ||||||||| |  || || ||||||||
Sbjct: 852 gtcggtcctgaaaatacctttgcaaacaccgacacggtcgtccctagttggtgcccagta 793

                            
Query: 692 gaacttctccatacgac 708
            || |||||||||||||
Sbjct: 792 aaatttctccatacgac 776



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 540 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 599
           ||||| |||||||| | ||  |||||||| || || |||||||| || ||||||||||||
Sbjct: 944 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 885

               
Query: 600 acga 603
           ||||
Sbjct: 884 acga 881



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>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 684 gcccagtagaacttctccatacgac 708
           |||||||||||||||||||||||||
Sbjct: 222 gcccagtagaacttctccatacgac 198



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 561 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 610
           |||||||||||||| || |||||||| |||||| | || || ||||||||
Sbjct: 345 gcaccgaaaaagtcgatagattgtccagggaagttatcaacaatcttgac 296



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>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 684 gcccagtagaacttctccatacgac 708
           |||||||||||||||||||||||||
Sbjct: 963 gcccagtagaacttctccatacgac 939



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>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 684 gcccagtagaacttctccatacgac 708
           |||||||||||||||||||||||||
Sbjct: 982 gcccagtagaacttctccatacgac 958



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>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 681 ggagcccagtagaacttctccatacgac 708
           ||||||||||||||||| ||||||||||
Sbjct: 419 ggagcccagtagaacttttccatacgac 392



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>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 684 gcccagtagaacttctccatacg 706
           |||||||||||||||||||||||
Sbjct: 995 gcccagtagaacttctccatacg 973



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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 328   catcacccagagctgcctggct 349
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254



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>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 654  cagacaccgatacggtcgtcacgggt 679
            ||||||||||||||||| ||||||||
Sbjct: 1016 cagacaccgatacggtcttcacgggt 991



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>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 28    aatatatttagagatatattaa 49
             ||||||||||||||||||||||
Sbjct: 67942 aatatatttagagatatattaa 67963



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>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    tatatttagagatatattaac 50
             |||||||||||||||||||||
Sbjct: 12315 tatatttagagatatattaac 12335



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>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 588  gggaaggtgtcgacgatcttg 608
            |||||||||||||||||||||
Sbjct: 3653 gggaaggtgtcgacgatcttg 3673



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>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    tatatttagagatatattaac 50
             |||||||||||||||||||||
Sbjct: 66387 tatatttagagatatattaac 66367



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>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 686 ccagtagaacttctccatacg 706
           |||||||||||||||||||||
Sbjct: 678 ccagtagaacttctccatacg 658



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      aaacatcagatattaaaagtg 119
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420



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>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence
          Length = 75381

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   atgcagcaagagatggtgggt 270
             |||||||||||||||||||||
Sbjct: 63530 atgcagcaagagatggtgggt 63550



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      aaacatcagatattaaaagtg 119
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365



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>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 99     aaacatcagatattaaaagtg 119
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423



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>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 30   tatatttagagatatattaac 50
            |||||||||||||||||||||
Sbjct: 6217 tatatttagagatatattaac 6197



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>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 638   ctggaagatacccttgcagacacc 661
             ||||| ||||||||||||||||||
Sbjct: 67288 ctggatgatacccttgcagacacc 67265



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>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   cctttacctcctcctatgca 254
             ||||||||||||||||||||
Sbjct: 46359 cctttacctcctcctatgca 46378



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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  catcacccagagctgcctggctca 351
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565



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>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  cctttacctcctcctatgca 254
            ||||||||||||||||||||
Sbjct: 1637 cctttacctcctcctatgca 1656



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>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   cctttacctcctcctatgca 254
             ||||||||||||||||||||
Sbjct: 32945 cctttacctcctcctatgca 32964



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>ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (hsp70) partial mRNA
          Length = 3732

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    ggtctttgccaatgggtata 24
            ||||||||||||||||||||
Sbjct: 2247 ggtctttgccaatgggtata 2266



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>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 gtcagcaagctgcacacgct 378
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223



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>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 606 ttgacgacagactcgtcact 625
           ||||||||||||||||||||
Sbjct: 289 ttgacgacagactcgtcact 308



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>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tcagatattaaaagtggcat 123
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077



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>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tcagatattaaaagtggcat 123
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583



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>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   tcagatattaaaagtggcat 123
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911



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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  catcacccagagctgcctggctca 351
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619



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>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    aatatatttagagatatatt 47
             ||||||||||||||||||||
Sbjct: 30454 aatatatttagagatatatt 30473



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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    ttgacattgtcctgctcctg 397
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419



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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  catcacccagagctgcctggctca 351
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935



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>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 132  ggtgtaaaggcagctgccgtcgtcgctc 159
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133



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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    aaacatgcccagcaatcgcttgga 75
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715



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>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   cctttacctcctcctatgca 254
             ||||||||||||||||||||
Sbjct: 34662 cctttacctcctcctatgca 34681



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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  catcacccagagctgcctggctca 351
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659



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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  catcacccagagctgcctggctca 351
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026



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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  catcacccagagctgcctggctca 351
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935



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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   tggcatgcttaaaaggtgta 137
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 657     acaccgatacggtcgtcacg 676
               ||||||||||||||||||||
Sbjct: 3056308 acaccgatacggtcgtcacg 3056327



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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    ttgacattgtcctgctcctg 397
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979



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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  catcacccagagctgcctggctca 351
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619



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>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 224 cttgctgtgctcctttacctcctc 247
           ||||||| ||||||||||||||||
Sbjct: 648 cttgctgggctcctttacctcctc 625



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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   cctttacctcctcctatgca 254
             ||||||||||||||||||||
Sbjct: 27755 cctttacctcctcctatgca 27736



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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aatatatttagagatatatt 47
             ||||||||||||||||||||
Sbjct: 62504 aatatatttagagatatatt 62485



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>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    atcagatattaaaagtggcatgct 126
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,905,028
Number of Sequences: 3902068
Number of extensions: 4905028
Number of successful extensions: 92512
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91990
Number of HSP's gapped (non-prelim): 452
length of query: 708
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 685
effective length of database: 17,143,297,704
effective search space: 11743158927240
effective search space used: 11743158927240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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