| Clone Name | rbags34j07 |
|---|---|
| Clone Library Name | barley_pub |
>YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I| Length = 374 Score = 44.7 bits (104), Expect = 3e-04 Identities = 28/82 (34%), Positives = 44/82 (53%) Frame = -3 Query: 634 STFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYSYFCT 455 S F +I KTS VT V G LK + + + HD NI+G++I + G+G+Y+Y+ Sbjct: 294 SEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVITLCGIGVYNYY-- 351 Query: 454 RETQPKPTEASPQVTQVKEGES 389 R T+ EA +V + E+ Sbjct: 352 RITKGNKKEAEKEVEYIVLNEN 373
>SL35E_HUMAN (Q96K37) Solute carrier family 35 member E1| Length = 266 Score = 42.0 bits (97), Expect = 0.002 Identities = 17/58 (29%), Positives = 34/58 (58%) Frame = -3 Query: 640 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS 467 N F ++ SP++Y V K +V+ ++L +P + N+LG++ A++G+ LY+ Sbjct: 132 NVIAFSILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYN 189
>SL35E_MOUSE (Q8CD26) Solute carrier family 35 member E1| Length = 265 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/58 (29%), Positives = 34/58 (58%) Frame = -3 Query: 640 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS 467 N F ++ SP++Y V K +V+ ++L +P + N+LG++ A++G+ LY+ Sbjct: 132 NVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYN 189
>YJT3_YEAST (P39542) Hypothetical protein YJL193w| Length = 402 Score = 39.3 bits (90), Expect = 0.011 Identities = 17/65 (26%), Positives = 37/65 (56%) Frame = -3 Query: 631 TFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYSYFCTR 452 TF ++G+ S +TY + +K ++A +V + +W + G+++ +G+ LY CT Sbjct: 333 TFHLLGEVSTLTYSIANLMKRFAIIAVSWVFIGRRITWLQVFGLVLNTLGLFLYER-CTS 391 Query: 451 ETQPK 437 +++ K Sbjct: 392 QSKIK 396
>S35D1_HUMAN (Q9NTN3) UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter| (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7) Length = 355 Score = 38.9 bits (89), Expect = 0.014 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -3 Query: 637 FSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDP-FSWRNILGILIAVVGMGLYSYF 461 ++T L S +T ++G +K L+ G V D F+W N +G+ I++ G +YSY Sbjct: 271 YATVLCTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYI 330 Query: 460 C-TRETQPKPTEAS 422 T E K +EA+ Sbjct: 331 TFTEEQLSKQSEAN 344
>CB018_RAT (Q5RKH7) Protein C2orf18 homolog precursor| Length = 372 Score = 38.1 bits (87), Expect = 0.024 Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 6/97 (6%) Frame = -3 Query: 640 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS-- 467 NFS V + S T VL L+T ++ AF L + F ILG LI ++G LY+ Sbjct: 277 NFSGISVTKELSATTRMVLDTLRTVVIWAFTLALGWEVFHPLQILGFLILLMGTALYNGL 336 Query: 466 ----YFCTRETQPKPTEASPQVTQVKEGESDPLIADS 368 C PT+ EGE + L+ DS Sbjct: 337 HRPLLACLSRRWRHPTQ---------EGEQERLLGDS 364
>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green| plastid, chloroplast precursor (CTPT) Length = 402 Score = 37.7 bits (86), Expect = 0.032 Identities = 21/69 (30%), Positives = 36/69 (52%) Frame = -3 Query: 631 TFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYSYFCTR 452 +++++ + SPVT+ V +K +V+ + P S N G IA+ G+ LYS + Sbjct: 336 SYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSR--VK 393 Query: 451 ETQPKPTEA 425 +PKP A Sbjct: 394 RIKPKPKTA 402
>US74C_DROME (Q95YI5) UDP-sugar transporter UST74c (Protein fringe connection)| Length = 373 Score = 36.2 bits (82), Expect = 0.092 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -3 Query: 643 VNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHD-PFSWRNILGILIAVVGMGLYS 467 +++ST L S +T ++G LK V G + D FSW N +GI I+V+ LY+ Sbjct: 290 LSYSTILCTQFNSALTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLYT 349 Query: 466 YFCTR 452 Y R Sbjct: 350 YVTFR 354
>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast| precursor Length = 388 Score = 35.8 bits (81), Expect = 0.12 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = -3 Query: 640 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS 467 N +++ + + SP+T+ + +K V+ ++ H P N LG IA+ G LYS Sbjct: 327 NQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYS 384
>CB018_MOUSE (Q8VE96) Protein C2orf18 homolog precursor| Length = 372 Score = 35.4 bits (80), Expect = 0.16 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%) Frame = -3 Query: 640 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS-- 467 NFS V + S T VL L+T ++ AF L + F ILG LI ++G LY+ Sbjct: 277 NFSGISVTKELSATTRMVLDTLRTIVIWAFTLALGWEIFYPLQILGFLILLMGTALYNGL 336 Query: 466 -----YFCTRETQPKPTEASPQVTQVKEGESDPLIADS 368 F +R + PT+ EGE + L+ DS Sbjct: 337 HRPLLAFLSRRWR-LPTQ---------EGEQERLLGDS 364
>CB018_PONPY (Q5RFT1) Protein C2orf18 homolog precursor| Length = 371 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = -3 Query: 640 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS 467 NF+ V + S T VL L+T ++ A L + F ILG LI ++G LY+ Sbjct: 277 NFAGISVTKELSATTRMVLDSLRTVVIWALSLALGWEAFHALQILGFLILLIGTALYN 334
>CB018_HUMAN (Q8N357) Protein C2orf18 precursor| Length = 371 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = -3 Query: 640 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS 467 NF+ V + S T VL L+T ++ A L + F ILG LI ++G LY+ Sbjct: 277 NFAGISVTKELSATTRMVLDSLRTVVIWALSLALGWEAFHALQILGFLILLIGTALYN 334
>YIY4_SCHPO (Q9UUI8) Protein C22F8.04 in chromosome I| Length = 383 Score = 34.3 bits (77), Expect = 0.35 Identities = 18/59 (30%), Positives = 29/59 (49%) Frame = -3 Query: 643 VNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYS 467 +N +TF I TSPVTY + ++ L L + I G+++ +VG LY+ Sbjct: 313 LNIATFTQIKVTSPVTYMISVSARSILQTLLAVAFLGETLYGNRIYGVILILVGTLLYT 371
>SQV7_CAEEL (Q18779) UDP-sugar transporter sqv-7 (Squashed vulva protein 7)| Length = 329 Score = 32.7 bits (73), Expect = 1.0 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = -3 Query: 643 VNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHD-PFSWRNILGILIAVVGMGLYS 467 +N+S L S +T +G +K V G D F W N GI ++V G LY+ Sbjct: 241 LNYSLVLCTHHNSALTTTCVGPIKNLFVTYVGMFSSGDYVFQWANFTGINVSVFGSILYT 300 Query: 466 YFCTR 452 Y R Sbjct: 301 YVTFR 305
>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -1 Query: 318 RSPCGAPSMHGHERCSSDL*RCPCGAPSARGHERRFGPW 202 R+ CG P H H +S R P AP H R G W Sbjct: 1211 RARCGCPRPHPHRPRASH--RAPAAAPHHHRHRRAAGGW 1247
>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -1 Query: 318 RSPCGAPSMHGHERCSSDL*RCPCGAPSARGHERRFGPW 202 R+ CG P H H +S R P AP H R G W Sbjct: 1211 RARCGCPRPHPHRPRASH--RAPAAAPHHHRHRRAAGGW 1247
>INX1_DROME (P27716) Innexin inx1 (Innexin-1) (Protein ogre) (Protein optic| ganglion reduced) Length = 362 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -3 Query: 568 CLVLAFGYVLLHDP-FSWRNILGILIAVVGMGLYSYFCTRETQPKPTEA 425 C VL F + + P F W G L+ ++ MGL CTRE + +A Sbjct: 113 CFVLFFQAMACYTPKFLWNKFEGGLMRMIVMGLNITICTREEKEAKRDA 161
>FUCT1_HUMAN (Q96A29) GDP-fucose transporter 1 (Solute carrier family 35 member| C1) Length = 364 Score = 30.0 bits (66), Expect = 6.6 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = -3 Query: 643 VNFSTFLVIGKTSPVTYQVLGHLKTC--LVLAFGYVLLHDPFSWRNILGILIAVVGMGLY 470 + + T L I TSP+T+ V G K C VLA Y F W ++ + G Y Sbjct: 280 IGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWT--SNMMVLGGSSAY 337 Query: 469 SYFCTRETQPKPTEASPQ 416 ++ E + P E SP+ Sbjct: 338 TWVRGWEMKKTPEEPSPK 355
>MOL2A_MOUSE (Q8BSU7) Mps one binder kinase activator-like 2A (Mob1 homolog 2A)| Length = 217 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +2 Query: 179 NYVYNTMNQGPKRRSCPRALGAPHGHLQRSEEQR-SCPCILGAP 307 N +Y T++ G +SCP G P + +EQR P L AP Sbjct: 73 NLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEQRFRKPTALSAP 116
>POTE_ECOLI (P0AAF1) Putrescine-ornithine antiporter (Putrescine transport| protein) Length = 439 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -3 Query: 649 SPVNFSTFLVIGKTSPVTYQV--LGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMG 476 S V + T L+ SPV + +G L C V FG + S + G++I VVG+ Sbjct: 106 SAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLC 165 Query: 475 LYSYF 461 + +F Sbjct: 166 IIGWF 170
>POTE_ECOL6 (P0AAF2) Putrescine-ornithine antiporter (Putrescine transport| protein) Length = 439 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -3 Query: 649 SPVNFSTFLVIGKTSPVTYQV--LGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMG 476 S V + T L+ SPV + +G L C V FG + S + G++I VVG+ Sbjct: 106 SAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLC 165 Query: 475 LYSYF 461 + +F Sbjct: 166 IIGWF 170
>RHAT_ERWCT (Q6DA13) L-rhamnose-proton symporter (L-rhamnose-H(+) transport| protein) Length = 344 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -3 Query: 589 VLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVVGMGLYSY 464 ++G L T ++ VL P +LG+L+AV+G+ + SY Sbjct: 112 IIGTLMTPVLQGKFSVLFGSPGGQMTLLGVLVAVIGVAIVSY 153
>NPT4_HUMAN (O00476) Sodium-dependent phosphate transport protein 4| (Sodium/phosphate cotransporter 4) (Na(+)/PI cotransporter 4) (Solute carrier family 18 member 3) Length = 401 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -3 Query: 550 GYVLLHDP-FSWRNILGILIAVVGMGLYSYFCTRETQPKPTEASPQVTQV 404 G++L DP F WRN+ +L AV +GL Y E + ++T++ Sbjct: 352 GFLLSQDPEFGWRNVFFLLFAVNLLGLLFYLIFGEADVQEWAKERKLTRL 401 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,998,007 Number of Sequences: 219361 Number of extensions: 1803036 Number of successful extensions: 4710 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4706 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)