| Clone Name | rbags34j07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184525.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1692 Score = 236 bits (119), Expect = 8e-59 Identities = 315/379 (83%), Gaps = 1/379 (0%) Strand = Plus / Minus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcggtggctgcagcggctccgttc 353 ||||||||||||||||| || |||||||||| ||||||| | |||| | | || || Sbjct: 1324 tacttggagctccacataggtaccttcagagcctcgtcgtcgcctgcgttgcccccattt 1265 Query: 354 tcggcggcgttcaaggagtccgcgatcaaagggtctgattcgccttccttcacctgggtg 413 || || | | |||| ||||||| |||||| ||||| ||||||| ||| || |||||| || Sbjct: 1264 tcagcagtgctcaaagagtccgagatcaaggggtccgattcgctttcttttacctggttg 1205 Query: 414 acttgtggagaggcttcagttggttttggctgagtttcacgggtgcagaagtaggaatat 473 | |||||| ||||||||||| |||||||| ||| || ||||||||||| || || Sbjct: 1204 agttgtggggaggcttcagtgggttttggtggagcctcttttgtgcagaagtatgagtac 1145 Query: 474 agtcccatcccaaccactgcaatcaggattccaagtatgtttctccagctaaacgggtcg 533 | ||||||||| ||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1144 gataccatcccaatcacagcaatgaggattccaagtatatttctccagctaaatggatcg 1085 Query: 534 tgaagcaagacatagccgaaggcaagaaccaaacatgtctttagatggccaaggacttga 593 |||||||| ||||| || |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 1084 tgaagcaaaacataaccaaaggcaagaaccaagcatgtcttgagatggccaagcacttgg 1025 Query: 594 taagttacaggagatgtcttcccaatcacaaggaaagtgctgaagttcacgggagactga 653 |||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1024 taagttacaggagaggttttcccgatcacaagaaaagtgctgaagttcac-tgagactga 966 Query: 654 tatcagacacgacagcaca 672 ||||| || ||||||||| Sbjct: 965 tatcaagcatgacagcaca 947 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/67 (83%), Gaps = 8/67 (11%) Strand = Plus / Minus Query: 114 cgttcattacactcagggctggcctggcttccttccagccc---tactatctgcctacta 170 |||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 1441 cgttcattacactcaggg-----ttggcttccttccaaccctagtactatctgcctacta 1387 Query: 171 aactgaa 177 | ||||| Sbjct: 1386 agctgaa 1380 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 cttggagctccacatgggcaccttcagag 264 ||||||||||||||| || |||||||||| Sbjct: 1322 cttggagctccacataggtaccttcagag 1294
>dbj|AK119227.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A03, full insert sequence Length = 1692 Score = 236 bits (119), Expect = 8e-59 Identities = 315/379 (83%), Gaps = 1/379 (0%) Strand = Plus / Minus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcggtggctgcagcggctccgttc 353 ||||||||||||||||| || |||||||||| ||||||| | |||| | | || || Sbjct: 1324 tacttggagctccacataggtaccttcagagcctcgtcgtcgcctgcgttgcccccattt 1265 Query: 354 tcggcggcgttcaaggagtccgcgatcaaagggtctgattcgccttccttcacctgggtg 413 || || | | |||| ||||||| |||||| ||||| ||||||| ||| || |||||| || Sbjct: 1264 tcagcagtgctcaaagagtccgagatcaaggggtccgattcgctttcttttacctggttg 1205 Query: 414 acttgtggagaggcttcagttggttttggctgagtttcacgggtgcagaagtaggaatat 473 | |||||| ||||||||||| |||||||| ||| || ||||||||||| || || Sbjct: 1204 agttgtggggaggcttcagtgggttttggtggagcctcttttgtgcagaagtatgagtac 1145 Query: 474 agtcccatcccaaccactgcaatcaggattccaagtatgtttctccagctaaacgggtcg 533 | ||||||||| ||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1144 gataccatcccaatcacagcaatgaggattccaagtatatttctccagctaaatggatcg 1085 Query: 534 tgaagcaagacatagccgaaggcaagaaccaaacatgtctttagatggccaaggacttga 593 |||||||| ||||| || |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 1084 tgaagcaaaacataaccaaaggcaagaaccaagcatgtcttgagatggccaagcacttgg 1025 Query: 594 taagttacaggagatgtcttcccaatcacaaggaaagtgctgaagttcacgggagactga 653 |||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1024 taagttacaggagaggttttcccgatcacaagaaaagtgctgaagttcac-tgagactga 966 Query: 654 tatcagacacgacagcaca 672 ||||| || ||||||||| Sbjct: 965 tatcaagcatgacagcaca 947 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/67 (83%), Gaps = 8/67 (11%) Strand = Plus / Minus Query: 114 cgttcattacactcagggctggcctggcttccttccagccc---tactatctgcctacta 170 |||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 1441 cgttcattacactcaggg-----ttggcttccttccaaccctagtactatctgcctacta 1387 Query: 171 aactgaa 177 | ||||| Sbjct: 1386 agctgaa 1380 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 cttggagctccacatgggcaccttcagag 264 ||||||||||||||| || |||||||||| Sbjct: 1322 cttggagctccacataggtaccttcagag 1294
>dbj|AK062253.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G05, full insert sequence Length = 1690 Score = 232 bits (117), Expect = 1e-57 Identities = 262/309 (84%), Gaps = 1/309 (0%) Strand = Plus / Minus Query: 364 tcaaggagtccgcgatcaaagggtctgattcgccttccttcacctgggtgacttgtggag 423 |||| ||||||| |||||| ||||| ||||||| ||| || |||||| ||| |||||| | Sbjct: 1254 tcaaagagtccgagatcaaggggtccgattcgctttcttttacctggttgagttgtgggg 1195 Query: 424 aggcttcagttggttttggctgagtttcacgggtgcagaagtaggaatatagtcccatcc 483 |||||||||| |||||||| ||| || ||||||||||| || || | |||||| Sbjct: 1194 aggcttcagtgggttttggtggagcctcttttgtgcagaagtatgagtacgataccatcc 1135 Query: 484 caaccactgcaatcaggattccaagtatgtttctccagctaaacgggtcgtgaagcaaga 543 ||| ||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| | Sbjct: 1134 caatcacagcaatgaggattccaagtatatttctccagctaaatggatcgtgaagcaaaa 1075 Query: 544 catagccgaaggcaagaaccaaacatgtctttagatggccaaggacttgataagttacag 603 |||| || |||||||||||||| |||||||| ||||||||||| ||||| |||||||||| Sbjct: 1074 cataaccaaaggcaagaaccaagcatgtcttgagatggccaagcacttggtaagttacag 1015 Query: 604 gagatgtcttcccaatcacaaggaaagtgctgaagttcacgggagactgatatcagacac 663 |||| || ||||| |||||||| ||||||||||||||||| ||||||||||||| || Sbjct: 1014 gagaggttttcccgatcacaagaaaagtgctgaagttcac-tgagactgatatcaagcat 956 Query: 664 gacagcaca 672 ||||||||| Sbjct: 955 gacagcaca 947 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/67 (83%), Gaps = 8/67 (11%) Strand = Plus / Minus Query: 114 cgttcattacactcagggctggcctggcttccttccagccc---tactatctgcctacta 170 |||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 1440 cgttcattacactcaggg-----ttggcttccttccaaccctagtactatctgcctacta 1386 Query: 171 aactgaa 177 | ||||| Sbjct: 1385 agctgaa 1379 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 tacttggagctccacatggggaccttca 321 ||||||||||||||||| || ||||||| Sbjct: 1323 tacttggagctccacataggtaccttca 1296
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 206 bits (104), Expect = 7e-50 Identities = 228/268 (85%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 405 acctgggtgacttgtggagaggcttcagttggttttggctgagtttcacgggtgcagaag 464 |||||| ||| |||||| ||||||||||| |||||||| ||| || ||||||||| Sbjct: 3446542 acctggttgagttgtggggaggcttcagtgggttttggtggagcctcttttgtgcagaag 3446601 Query: 465 taggaatatagtcccatcccaaccactgcaatcaggattccaagtatgtttctccagcta 524 || || || | ||||||||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 3446602 tatgagtacgataccatcccaatcacagcaatgaggattccaagtatatttctccagcta 3446661 Query: 525 aacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtctttagatggcca 584 || || ||||||||||| ||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 3446662 aatggatcgtgaagcaaaacataaccaaaggcaagaaccaagcatgtcttgagatggcca 3446721 Query: 585 aggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagttcacg 644 || ||||| |||||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 3446722 agcacttggtaagttacaggagaggttttcccgatcacaagaaaagtgctgaagttcac- 3446780 Query: 645 ggagactgatatcagacacgacagcaca 672 ||||||||||||| || ||||||||| Sbjct: 3446781 tgagactgatatcaagcatgacagcaca 3446808 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcg 332 ||||||||||||||||| || |||||||||| ||||||| Sbjct: 3446308 tacttggagctccacataggtaccttcagagcctcgtcg 3446346 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 588 acttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 ||||| || |||||||||||||| ||||| |||||||| || || |||||||| Sbjct: 35145545 acttggtatgttacaggagatgttttcccgatcacaagaaatgtactgaagtt 35145493 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 236 cttggagctccacatgggcaccttcagag 264 ||||||||||||||| || |||||||||| Sbjct: 3446310 cttggagctccacataggtaccttcagag 3446338 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/67 (83%), Gaps = 8/67 (11%) Strand = Plus / Plus Query: 114 cgttcattacactcagggctggcctggcttccttccagccc---tactatctgcctacta 170 |||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 3446191 cgttcattacactcaggg-----ttggcttccttccaaccctagtactatctgcctacta 3446245 Query: 171 aactgaa 177 | ||||| Sbjct: 3446246 agctgaa 3446252
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 206 bits (104), Expect = 7e-50 Identities = 228/268 (85%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 405 acctgggtgacttgtggagaggcttcagttggttttggctgagtttcacgggtgcagaag 464 |||||| ||| |||||| ||||||||||| |||||||| ||| || ||||||||| Sbjct: 124912 acctggttgagttgtggggaggcttcagtgggttttggtggagcctcttttgtgcagaag 124971 Query: 465 taggaatatagtcccatcccaaccactgcaatcaggattccaagtatgtttctccagcta 524 || || || | ||||||||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 124972 tatgagtacgataccatcccaatcacagcaatgaggattccaagtatatttctccagcta 125031 Query: 525 aacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtctttagatggcca 584 || || ||||||||||| ||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 125032 aatggatcgtgaagcaaaacataaccaaaggcaagaaccaagcatgtcttgagatggcca 125091 Query: 585 aggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagttcacg 644 || ||||| |||||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 125092 agcacttggtaagttacaggagaggttttcccgatcacaagaaaagtgctgaagttcac- 125150 Query: 645 ggagactgatatcagacacgacagcaca 672 ||||||||||||| || ||||||||| Sbjct: 125151 tgagactgatatcaagcatgacagcaca 125178 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcg 332 ||||||||||||||||| || |||||||||| ||||||| Sbjct: 124678 tacttggagctccacataggtaccttcagagcctcgtcg 124716 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 236 cttggagctccacatgggcaccttcagag 264 ||||||||||||||| || |||||||||| Sbjct: 124680 cttggagctccacataggtaccttcagag 124708 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/67 (83%), Gaps = 8/67 (11%) Strand = Plus / Plus Query: 114 cgttcattacactcagggctggcctggcttccttccagccc---tactatctgcctacta 170 |||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 124561 cgttcattacactcaggg-----ttggcttccttccaaccctagtactatctgcctacta 124615 Query: 171 aactgaa 177 | ||||| Sbjct: 124616 agctgaa 124622
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 206 bits (104), Expect = 7e-50 Identities = 228/268 (85%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 405 acctgggtgacttgtggagaggcttcagttggttttggctgagtttcacgggtgcagaag 464 |||||| ||| |||||| ||||||||||| |||||||| ||| || ||||||||| Sbjct: 14610 acctggttgagttgtggggaggcttcagtgggttttggtggagcctcttttgtgcagaag 14669 Query: 465 taggaatatagtcccatcccaaccactgcaatcaggattccaagtatgtttctccagcta 524 || || || | ||||||||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 14670 tatgagtacgataccatcccaatcacagcaatgaggattccaagtatatttctccagcta 14729 Query: 525 aacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtctttagatggcca 584 || || ||||||||||| ||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 14730 aatggatcgtgaagcaaaacataaccaaaggcaagaaccaagcatgtcttgagatggcca 14789 Query: 585 aggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagttcacg 644 || ||||| |||||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 14790 agcacttggtaagttacaggagaggttttcccgatcacaagaaaagtgctgaagttcac- 14848 Query: 645 ggagactgatatcagacacgacagcaca 672 ||||||||||||| || ||||||||| Sbjct: 14849 tgagactgatatcaagcatgacagcaca 14876 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcg 332 ||||||||||||||||| || |||||||||| ||||||| Sbjct: 14376 tacttggagctccacataggtaccttcagagcctcgtcg 14414 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 236 cttggagctccacatgggcaccttcagag 264 ||||||||||||||| || |||||||||| Sbjct: 14378 cttggagctccacataggtaccttcagag 14406 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/67 (83%), Gaps = 8/67 (11%) Strand = Plus / Plus Query: 114 cgttcattacactcagggctggcctggcttccttccagccc---tactatctgcctacta 170 |||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 14259 cgttcattacactcaggg-----ttggcttccttccaaccctagtactatctgcctacta 14313 Query: 171 aactgaa 177 | ||||| Sbjct: 14314 agctgaa 14320
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 206 bits (104), Expect = 7e-50 Identities = 228/268 (85%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 405 acctgggtgacttgtggagaggcttcagttggttttggctgagtttcacgggtgcagaag 464 |||||| ||| |||||| ||||||||||| |||||||| ||| || ||||||||| Sbjct: 33302 acctggttgagttgtggggaggcttcagtgggttttggtggagcctcttttgtgcagaag 33361 Query: 465 taggaatatagtcccatcccaaccactgcaatcaggattccaagtatgtttctccagcta 524 || || || | ||||||||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 33362 tatgagtacgataccatcccaatcacagcaatgaggattccaagtatatttctccagcta 33421 Query: 525 aacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtctttagatggcca 584 || || ||||||||||| ||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 33422 aatggatcgtgaagcaaaacataaccaaaggcaagaaccaagcatgtcttgagatggcca 33481 Query: 585 aggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagttcacg 644 || ||||| |||||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 33482 agcacttggtaagttacaggagaggttttcccgatcacaagaaaagtgctgaagttcac- 33540 Query: 645 ggagactgatatcagacacgacagcaca 672 ||||||||||||| || ||||||||| Sbjct: 33541 tgagactgatatcaagcatgacagcaca 33568 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcg 332 ||||||||||||||||| || |||||||||| ||||||| Sbjct: 33068 tacttggagctccacataggtaccttcagagcctcgtcg 33106 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 236 cttggagctccacatgggcaccttcagag 264 ||||||||||||||| || |||||||||| Sbjct: 33070 cttggagctccacataggtaccttcagag 33098 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/67 (83%), Gaps = 8/67 (11%) Strand = Plus / Plus Query: 114 cgttcattacactcagggctggcctggcttccttccagccc---tactatctgcctacta 170 |||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 32951 cgttcattacactcaggg-----ttggcttccttccaaccctagtactatctgcctacta 33005 Query: 171 aactgaa 177 | ||||| Sbjct: 33006 agctgaa 33012
>gb|BT016349.1| Zea mays clone Contig182 mRNA sequence Length = 1271 Score = 167 bits (84), Expect = 6e-38 Identities = 184/216 (85%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| || || || ||||||| | ||| || ||||||||||||||||||||| Sbjct: 757 gtgcagaagtacgagtacagaaccatcccgatcaccgcgatcaggattccaagtatgttt 698 Query: 516 ctccagctaaacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtcttt 575 |||||||||||||||||||| |||| ||| ||||||||||| || ||||| || || || Sbjct: 697 ctccagctaaacgggtcgtggagcaggacgtagccgaaggcgaggaccaagcacgttttc 638 Query: 576 agatggccaaggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctg 635 || ||||| || ||||| || |||||||| || |||||||| |||||||||||||||||| Sbjct: 637 aggtggccgagaacttggtaggttacaggcgacgtcttcccgatcacaaggaaagtgctg 578 Query: 636 aagttcacgggagactgatatcagacacgacagcac 671 ||||| || ||||| || ||||| ||||||||||| Sbjct: 577 aagtttac-cgagaccgagatcaggcacgacagcac 543 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcg 332 ||||| ||||||||||| || |||||||||||||||||| Sbjct: 919 tacttcgagctccacattggcaccttcagaggctcgtcg 881 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 gagctccacatgggcaccttcagagg 265 ||||||||||| |||||||||||||| Sbjct: 913 gagctccacattggcaccttcagagg 888
>gb|AY108612.1| Zea mays PCO138723 mRNA sequence Length = 1272 Score = 167 bits (84), Expect = 6e-38 Identities = 184/216 (85%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| || || || ||||||| | ||| || ||||||||||||||||||||| Sbjct: 747 gtgcagaagtacgagtacaggaccatcccgatcaccgcgatcaggattccaagtatgttt 688 Query: 516 ctccagctaaacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtcttt 575 |||||||||||||||||||| |||| ||| ||||||||||| || ||||| || || || Sbjct: 687 ctccagctaaacgggtcgtggagcaggacgtagccgaaggcgaggaccaagcacgttttc 628 Query: 576 agatggccaaggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctg 635 || ||||| || ||||| || |||||||| || |||||||| |||||||||||||||||| Sbjct: 627 aggtggccgagaacttggtaggttacaggcgacgtcttcccgatcacaaggaaagtgctg 568 Query: 636 aagttcacgggagactgatatcagacacgacagcac 671 ||||| || ||||| || ||||| ||||||||||| Sbjct: 567 aagtttac-cgagaccgagatcaggcacgacagcac 533 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 294 tacttggagctccacatggggaccttcagaggctcgtcg 332 ||||| ||||||||||| || |||||||||||||||||| Sbjct: 912 tacttcgagctccacattggcaccttcagaggctcgtcg 874 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 gagctccacatgggcaccttcagagg 265 ||||||||||| |||||||||||||| Sbjct: 906 gagctccacattggcaccttcagagg 881
>gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086E02, complete sequence Length = 150474 Score = 143 bits (72), Expect = 9e-31 Identities = 159/188 (84%) Strand = Plus / Plus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| || |||| |||| ||||| |||||||| ||||| || ||||||||| Sbjct: 135990 gtgcagaagtatgagtataagaccattccaactactgcaattaggatgccgagtatgttt 136049 Query: 516 ctccagctaaacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtcttt 575 ||||||||||| ||||| |||||||| ||||| || |||| || || | ||||| || Sbjct: 136050 ctccagctaaatgggtcatgaagcaaaacataaccaaaggtcagtactaggcatgtttta 136109 Query: 576 agatggccaaggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctg 635 |||||||| |||||||| ||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 136110 agatggcccaggacttggtaagtgacaggagaagtctttccgatcacaaggaaagtgctg 136169 Query: 636 aagttcac 643 |||||||| Sbjct: 136170 aagttcac 136177
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 143 bits (72), Expect = 9e-31 Identities = 159/188 (84%) Strand = Plus / Plus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| || |||| |||| ||||| |||||||| ||||| || ||||||||| Sbjct: 34157 gtgcagaagtatgagtataagaccattccaactactgcaattaggatgccgagtatgttt 34216 Query: 516 ctccagctaaacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtcttt 575 ||||||||||| ||||| |||||||| ||||| || |||| || || | ||||| || Sbjct: 34217 ctccagctaaatgggtcatgaagcaaaacataaccaaaggtcagtactaggcatgtttta 34276 Query: 576 agatggccaaggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctg 635 |||||||| |||||||| ||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 34277 agatggcccaggacttggtaagtgacaggagaagtctttccgatcacaaggaaagtgctg 34336 Query: 636 aagttcac 643 |||||||| Sbjct: 34337 aagttcac 34344
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 9e-31 Identities = 159/188 (84%) Strand = Plus / Plus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| || |||| |||| ||||| |||||||| ||||| || ||||||||| Sbjct: 4059463 gtgcagaagtatgagtataagaccattccaactactgcaattaggatgccgagtatgttt 4059522 Query: 516 ctccagctaaacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtcttt 575 ||||||||||| ||||| |||||||| ||||| || |||| || || | ||||| || Sbjct: 4059523 ctccagctaaatgggtcatgaagcaaaacataaccaaaggtcagtactaggcatgtttta 4059582 Query: 576 agatggccaaggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctg 635 |||||||| |||||||| ||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 4059583 agatggcccaggacttggtaagtgacaggagaagtctttccgatcacaaggaaagtgctg 4059642 Query: 636 aagttcac 643 |||||||| Sbjct: 4059643 aagttcac 4059650 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 agttggttttggctgagttt 450 |||||||||||||||||||| Sbjct: 22833090 agttggttttggctgagttt 22833109
>dbj|AK065618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028M22, full insert sequence Length = 1713 Score = 143 bits (72), Expect = 9e-31 Identities = 159/188 (84%) Strand = Plus / Minus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| || |||| |||| ||||| |||||||| ||||| || ||||||||| Sbjct: 1115 gtgcagaagtatgagtataagaccattccaactactgcaattaggatgccgagtatgttt 1056 Query: 516 ctccagctaaacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtcttt 575 ||||||||||| ||||| |||||||| ||||| || |||| || || | ||||| || Sbjct: 1055 ctccagctaaatgggtcatgaagcaaaacataaccaaaggtcagtactaggcatgtttta 996 Query: 576 agatggccaaggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctg 635 |||||||| |||||||| ||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 995 agatggcccaggacttggtaagtgacaggagaagtctttccgatcacaaggaaagtgctg 936 Query: 636 aagttcac 643 |||||||| Sbjct: 935 aagttcac 928
>dbj|AB060277.1| Oryza sativa GPT mRNA for putative glucose-6-phosphate/phosphate-tranlocator, complete cds Length = 1065 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Minus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| || |||| |||| ||||| |||||||| ||||| || ||||||||| Sbjct: 896 gtgcagaagtatgagtataagaccattccaactactgcaattaggatgccgagtatgttt 837 Query: 516 ctccagctaaacgggtcgtgaagcaagacatagccgaaggcaagaaccaaacatgtcttt 575 |||||||||| ||||| |||||||| ||||| || || || || | ||||| || Sbjct: 836 ctccagctaagtgggtcatgaagcaaaacataaccaaaaatcagtactaggcatgtttta 777 Query: 576 agatggccaaggacttgataagttacaggagatgtcttcccaatcacaaggaaagtgctg 635 |||||||| |||||||| ||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 776 agatggcccaggacttggtaagtgacaggagaagtctttccgatcacaaggaaagtgctg 717 Query: 636 aagttcac 643 |||||||| Sbjct: 716 aagttcac 709
>gb|AY111469.1| Zea mays CL6403_1 mRNA sequence Length = 701 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| || |||||||| |||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 575 catgttttaagatggcccaggacttggtaagtaacaggagatgtctttccgatcacaagg 634 Query: 627 aaagtgctgaagttcac 643 ||||||||||||||||| Sbjct: 635 aaagtgctgaagttcac 651 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 456 gtgcagaagtaggaatatagtcccatcccaaccactgcaatcaggattccaagtatgttt 515 ||||||||||| ||||||| |||| ||||| || ||||| |||||||||||||||||| Sbjct: 464 gtgcagaagtatgaatataagaccattccaactacagcaattaggattccaagtatgttt 523 Query: 516 ctccagctaaacgggtcgtgaag 538 |||||||||||||| |||||||| Sbjct: 524 ctccagctaaacggatcgtgaag 546 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 294 tacttggagctccacatggggaccttcagaggctcgtc 331 ||||| |||||||||||||| ||||||| ||||||||| Sbjct: 308 tactttgagctccacatgggtaccttcaaaggctcgtc 345 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 145 cttccagccctactatctgcctactaaactgaat 178 |||||| ||||||||||||||| ||||| ||||| Sbjct: 231 cttccaaccctactatctgcctgctaaattgaat 264 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 226 cccgcgagcgcttggagctccacatgggcaccttca 261 |||||||| ||| |||||||||||||| ||||||| Sbjct: 300 cccgcgagtactttgagctccacatgggtaccttca 335
>ref|NM_128598.1| Arabidopsis thaliana unknown protein AT2G30460 mRNA, complete cds Length = 603 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 323 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 264 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 263 aacgtgctgaagtt 250
>gb|BT008742.1| Arabidopsis thaliana At2g30460 gene, complete cds Length = 1062 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 782 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 723 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 722 aacgtgctgaagtt 709
>gb|U93215.3| Arabidopsis thaliana chromosome 2 BAC T6B20 genomic sequence, complete sequence Length = 104861 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 76535 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 76476 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 76475 aacgtgctgaagtt 76462
>dbj|AK221221.1| Arabidopsis thaliana mRNA for integral membrane protein -like, complete cds, clone: RAFL23-16-F10 Length = 1614 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 1030 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 971 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 970 aacgtgctgaagtt 957
>emb|BX819047.1|CNS0A9QL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1422 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 876 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 817 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 816 aacgtgctgaagtt 803
>emb|BX820219.1|CNS0A9EQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS95ZF03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1353 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 869 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 810 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 809 aacgtgctgaagtt 796
>gb|BT002471.1| Arabidopsis thaliana putative integral membrane protein (At2g30460) mRNA, complete cds Length = 1471 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 888 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 829 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 828 aacgtgctgaagtt 815
>dbj|AK176274.1| Arabidopsis thaliana mRNA for integral membrane protein -like, complete cds, clone: RAFL23-19-D12 Length = 1614 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 1030 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 971 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 970 aacgtgctgaagtt 957
>dbj|AK176178.1| Arabidopsis thaliana mRNA for integral membrane protein -like, complete cds, clone: RAFL23-04-K15 Length = 1614 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 1030 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 971 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 970 aacgtgctgaagtt 957
>dbj|AK176166.1| Arabidopsis thaliana mRNA for integral membrane protein -like, complete cds, clone: RAFL23-02-C03 Length = 1614 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 567 catgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaagg 626 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || || Sbjct: 1030 catgtttttagatgtcctagaacctgataagtgacaggagatgtctttccaatgacgaga 971 Query: 627 aaagtgctgaagtt 640 || ||||||||||| Sbjct: 970 aacgtgctgaagtt 957
>ref|NM_100564.3| Arabidopsis thaliana unknown protein AT1G06890 mRNA, complete cds Length = 1439 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 537 agcaagacatagccgaaggcaagaaccaaacatgtctttagatggccaaggacttgataa 596 ||||| |||||||| || || ||||||| ||||| || ||||| || || || ||||| Sbjct: 1012 agcaacacatagccaaatgctagaaccaggcatgttttgagatgtcctagaacctgatat 953 Query: 597 gttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 952 gtgacaggagatgtttttccaatgacaagaaatgtgctgaagtt 909
>gb|AY117281.1| Arabidopsis thaliana unknown protein (At1g06890) mRNA, complete cds Length = 1105 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 537 agcaagacatagccgaaggcaagaaccaaacatgtctttagatggccaaggacttgataa 596 ||||| |||||||| || || ||||||| ||||| || ||||| || || || ||||| Sbjct: 812 agcaacacatagccaaatgctagaaccaggcatgttttgagatgtcctagaacctgatat 753 Query: 597 gttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 752 gtgacaggagatgtttttccaatgacaagaaatgtgctgaagtt 709
>gb|AY080815.1| Arabidopsis thaliana unknown protein (At1g06890) mRNA, complete cds Length = 1458 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 537 agcaagacatagccgaaggcaagaaccaaacatgtctttagatggccaaggacttgataa 596 ||||| |||||||| || || ||||||| ||||| || ||||| || || || ||||| Sbjct: 1012 agcaacacatagccaaatgctagaaccaggcatgttttgagatgtcctagaacctgatat 953 Query: 597 gttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 952 gtgacaggagatgtttttccaatgacaagaaatgtgctgaagtt 909
>emb|BX816852.1|CNS0ADC5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1298 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 537 agcaagacatagccgaaggcaagaaccaaacatgtctttagatggccaaggacttgataa 596 ||||| |||||||| || || ||||||| ||||| || ||||| || || || ||||| Sbjct: 1011 agcaacacatagccaaatgctagaaccaggcatgttttgagatgtcctagaacctgatat 952 Query: 597 gttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 951 gtgacaggagatgtttttccaatgacaagaaatgtgctgaagtt 908
>gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H5 genomic sequence, complete sequence Length = 91608 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 537 agcaagacatagccgaaggcaagaaccaaacatgtctttagatggccaaggacttgataa 596 ||||| |||||||| || || ||||||| ||||| || ||||| || || || ||||| Sbjct: 22902 agcaacacatagccaaatgctagaaccaggcatgttttgagatgtcctagaacctgatat 22843 Query: 597 gttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 22842 gtgacaggagatgtttttccaatgacaagaaatgtgctgaagtt 22799
>ref|XM_466859.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacgg 645 |||| ||||||||||| |||||||||||||||| Sbjct: 929 tcccgatcacaaggaacgtgctgaagttcacgg 897
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacgg 645 |||| ||||||||||| |||||||||||||||| Sbjct: 25140687 tcccgatcacaaggaacgtgctgaagttcacgg 25140655
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 588 acttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 ||||| || |||||||||||||| ||||| |||||||| || || |||||||| Sbjct: 24629 acttggtatgttacaggagatgttttcccgatcacaagaaatgtactgaagtt 24577
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 588 acttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 ||||| || |||||||||||||| ||||| |||||||| || || |||||||| Sbjct: 152695 acttggtatgttacaggagatgttttcccgatcacaagaaatgtactgaagtt 152643
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacgg 645 |||| ||||||||||| |||||||||||||||| Sbjct: 41080 tcccgatcacaaggaacgtgctgaagttcacgg 41048
>dbj|AK070820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066G14, full insert sequence Length = 1571 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacgg 645 |||| ||||||||||| |||||||||||||||| Sbjct: 928 tcccgatcacaaggaacgtgctgaagttcacgg 896
>dbj|AK066097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056K15, full insert sequence Length = 2181 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 588 acttgataagttacaggagatgtcttcccaatcacaaggaaagtgctgaagtt 640 ||||| || |||||||||||||| ||||| |||||||| || || |||||||| Sbjct: 1399 acttggtatgttacaggagatgttttcccgatcacaagaaatgtactgaagtt 1347
>dbj|AK059676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-G11, full insert sequence Length = 1091 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacgg 645 |||| ||||||||||| |||||||||||||||| Sbjct: 677 tcccgatcacaaggaacgtgctgaagttcacgg 645
>gb|AC133090.4| Mus musculus BAC clone RP24-194H23 from chromosome 15, complete sequence Length = 148555 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 tcacctgggtgacttgtggaga 424 |||||||||||||||||||||| Sbjct: 72677 tcacctgggtgacttgtggaga 72698
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.59 Identities = 64/78 (82%) Strand = Plus / Plus Query: 566 acatgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaag 625 ||||||||| || ||||| || || || || || || |||||||| | ||||||||||| Sbjct: 17786220 acatgtcttaaggtggcctagcacctggtatgtaactggagatgttgttccaatcacaag 17786279 Query: 626 gaaagtgctgaagttcac 643 || |||||||||||||| Sbjct: 17786280 aaatgtgctgaagttcac 17786297
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 44.1 bits (22), Expect = 0.59 Identities = 64/78 (82%) Strand = Plus / Plus Query: 566 acatgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaag 625 ||||||||| || ||||| || || || || || || |||||||| | ||||||||||| Sbjct: 56642 acatgtcttaaggtggcctagcacctggtatgtaactggagatgttgttccaatcacaag 56701 Query: 626 gaaagtgctgaagttcac 643 || |||||||||||||| Sbjct: 56702 aaatgtgctgaagttcac 56719
>dbj|AK067824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119D13, full insert sequence Length = 2151 Score = 44.1 bits (22), Expect = 0.59 Identities = 64/78 (82%) Strand = Plus / Minus Query: 566 acatgtctttagatggccaaggacttgataagttacaggagatgtcttcccaatcacaag 625 ||||||||| || ||||| || || || || || || |||||||| | ||||||||||| Sbjct: 1726 acatgtcttaaggtggcctagcacctggtatgtaactggagatgttgttccaatcacaag 1667 Query: 626 gaaagtgctgaagttcac 643 || |||||||||||||| Sbjct: 1666 aaatgtgctgaagttcac 1649
>gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, complete sequence Length = 216451 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ccactgcaatcaggattccaa 507 ||||||||||||||||||||| Sbjct: 211124 ccactgcaatcaggattccaa 211104
>ref|NM_197026.1| Oryza sativa (japonica cultivar-group) putative glucose-6-phosphate/phosphate-translocator (OSJNBa0055P24.11), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacg 644 |||| ||||| ||||| ||||||||||||||| Sbjct: 683 tcccgatcaccaggaacgtgctgaagttcacg 652
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 agttggttttggctgagttt 450 |||||||||||||||||||| Sbjct: 31794 agttggttttggctgagttt 31813
>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence Length = 241514 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 acaaggaaagtgctgaagtt 640 |||||||||||||||||||| Sbjct: 161825 acaaggaaagtgctgaagtt 161844
>emb|Z72501.1|CEC04C11 Caenorhabditis elegans Cosmid C04C11, complete sequence Length = 39757 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgaataattatgtatataat 193 |||||||||||||||||||| Sbjct: 12467 tgaataattatgtatataat 12486
>gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hospital Oakland Research Institute) complete sequence Length = 215638 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cagggctggcctggcttcct 146 |||||||||||||||||||| Sbjct: 174492 cagggctggcctggcttcct 174511
>gb|AC161755.3| Mus musculus BAC clone RP24-363L9 from chromosome 16, complete sequence Length = 195244 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 agggctggcctggcttcctt 147 |||||||||||||||||||| Sbjct: 145315 agggctggcctggcttcctt 145334
>emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chromosome 5, segment 3/4 Length = 343050 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 atgtatataataccatgaac 202 |||||||||||||||||||| Sbjct: 279242 atgtatataataccatgaac 279223
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 613 tcccaatcacaaggaaagtgctgaagttcacg 644 |||| ||||| ||||| ||||||||||||||| Sbjct: 171943 tcccgatcaccaggaacgtgctgaagttcacg 171974
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacg 644 |||| ||||| ||||| ||||||||||||||| Sbjct: 17502688 tcccgatcaccaggaacgtgctgaagttcacg 17502657
>gb|AC140186.3| Mus musculus BAC clone RP24-363G9 from chromosome 16, complete sequence Length = 139767 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 agggctggcctggcttcctt 147 |||||||||||||||||||| Sbjct: 130200 agggctggcctggcttcctt 130181
>gb|AC092632.2| Homo sapiens BAC clone RP11-337B18 from 2, complete sequence Length = 199385 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 gataagttacaggagatgtc 611 |||||||||||||||||||| Sbjct: 51794 gataagttacaggagatgtc 51813
>gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, complete sequence Length = 116899 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 aactgaataattatgtatataata 194 ||||||| |||||||||||||||| Sbjct: 22243 aactgaagaattatgtatataata 22220
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacg 644 |||| ||||| ||||| ||||||||||||||| Sbjct: 131683 tcccgatcaccaggaacgtgctgaagttcacg 131652
>dbj|AK109405.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H02, full insert sequence Length = 1142 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacg 644 |||| ||||| ||||| ||||||||||||||| Sbjct: 461 tcccgatcaccaggaacgtgctgaagttcacg 430
>dbj|AK103346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126D12, full insert sequence Length = 1629 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacg 644 |||| ||||| ||||| ||||||||||||||| Sbjct: 977 tcccgatcaccaggaacgtgctgaagttcacg 946
>emb|AJ330651.1|HSA330651 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4P-I15RS Length = 740 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 cgtcggtggctgcagcggct 347 |||||||||||||||||||| Sbjct: 17 cgtcggtggctgcagcggct 36
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 613 tcccaatcacaaggaaagtgctgaagttcacg 644 |||| ||||| ||||| ||||||||||||||| Sbjct: 17511728 tcccgatcaccaggaacgtgctgaagttcacg 17511697
>emb|BX936386.9| Zebrafish DNA sequence from clone CH211-232P21 in linkage group 3, complete sequence Length = 158520 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aataattatgtatataatac 195 |||||||||||||||||||| Sbjct: 132444 aataattatgtatataatac 132425
>gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, complete sequence Length = 184981 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ttacaacagcaccacaggca 59 |||||||||||||||||||| Sbjct: 91428 ttacaacagcaccacaggca 91409 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,742,373 Number of Sequences: 3902068 Number of extensions: 4742373 Number of successful extensions: 89052 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88717 Number of HSP's gapped (non-prelim): 312 length of query: 672 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 649 effective length of database: 17,143,297,704 effective search space: 11126000209896 effective search space used: 11126000209896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)