ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags34j05 |
|---|---|
| Clone Library Name | barley_pub |
>COPG_BOVIN (P53620) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)| Length = 874 Score = 130 bits (328), Expect = 3e-30 Identities = 67/150 (44%), Positives = 92/150 (61%), Gaps = 2/150 (1%) Frame = -2 Query: 657 PLRSLPYDSPGQ--TFVAFEKPEGVLATGKFSNILKFIVKEVDSSTGEAEDDGVEDEYQL 484 P RSLPY+ PG T VA K + FS ++KF VK+ D +TGEA+D+G EDEY L Sbjct: 694 PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEADDEGYEDEYVL 753 Query: 483 EDFEIISADYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVSAVISILGMQPC 304 ED E+ AD++ KV NF AW+ + E ++ + + L + L EAV ++ LGM PC Sbjct: 754 EDLEVTIADHIQKVMKLNFEAAWDEVGDEFQKEETFTLSTIKTLEEAVGNIVKFLGMHPC 813 Query: 303 EGTDVVQNNSRSHTCLLSGVFIGNVKVLVR 214 E +D V +N +HT LL+GVF G +LVR Sbjct: 814 ERSDKVPDNKNTHTLLLAGVFRGGHDILVR 843
>COPG_HUMAN (Q9Y678) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)| Length = 874 Score = 129 bits (325), Expect = 6e-30 Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 2/150 (1%) Frame = -2 Query: 657 PLRSLPYDSPGQ--TFVAFEKPEGVLATGKFSNILKFIVKEVDSSTGEAEDDGVEDEYQL 484 P RSLPY+ PG T VA K + FS ++KF VK+ D +TGE +D+G EDEY L Sbjct: 694 PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVL 753 Query: 483 EDFEIISADYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVSAVISILGMQPC 304 ED E+ AD++ KV NF AW+ + E E+ + + L + L EAV ++ LGM PC Sbjct: 754 EDLEVTVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPC 813 Query: 303 EGTDVVQNNSRSHTCLLSGVFIGNVKVLVR 214 E +D V +N +HT LL+GVF G +LVR Sbjct: 814 ERSDKVPDNKNTHTLLLAGVFRGGHDILVR 843
>COPG2_HUMAN (Q9UBF2) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2| COP) Length = 871 Score = 122 bits (305), Expect = 1e-27 Identities = 66/171 (38%), Positives = 97/171 (56%), Gaps = 2/171 (1%) Frame = -2 Query: 657 PLRSLPYDSPG--QTFVAFEKPEGVLATGKFSNILKFIVKEVDSSTGEAEDDGVEDEYQL 484 P SLPY+ PG T V + G FS +KF V++ D +TG ++DG +DEY L Sbjct: 691 PAPSLPYNQPGICYTLVRLPDDDPTAVAGSFSCTMKFTVRDCDPNTGVPDEDGYDDEYVL 750 Query: 483 EDFEIISADYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVSAVISILGMQPC 304 ED E+ +D++ KV NF AWE + E+ + + L + L EAV+ +I+ LGMQPC Sbjct: 751 EDLEVTVSDHIQKVLKPNFAAAWEEVGDTFEKEETFALSSTKTLEEAVNNIITFLGMQPC 810 Query: 303 EGTDVVQNNSRSHTCLLSGVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDD 151 E +D V N SH+ L+G+F G +LVR ++ V M++ VRS + Sbjct: 811 ERSDKVPENKNSHSLYLAGIFRGGYDLLVRSRLALA--DGVTMQVTVRSKE 859
>COPG2_MOUSE (Q9QXK3) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2| COP) Length = 871 Score = 120 bits (301), Expect = 4e-27 Identities = 65/171 (38%), Positives = 97/171 (56%), Gaps = 2/171 (1%) Frame = -2 Query: 657 PLRSLPYDSPG--QTFVAFEKPEGVLATGKFSNILKFIVKEVDSSTGEAEDDGVEDEYQL 484 P SLPY+ PG T V + G FS +KF V++ D +TG ++DG +DEY L Sbjct: 691 PAPSLPYNQPGICYTLVRLPDEDPTAVAGTFSCTMKFTVRDCDPNTGVPDEDGYDDEYVL 750 Query: 483 EDFEIISADYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVSAVISILGMQPC 304 ED E+ +D++ K+ NF AWE + E+ + + L + L EAV+ +I+ LGMQPC Sbjct: 751 EDLEVTVSDHIQKILKPNFAAAWEEVGDAFEKEETFALSSTKTLEEAVNNIITFLGMQPC 810 Query: 303 EGTDVVQNNSRSHTCLLSGVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDD 151 E +D V N SH+ L+GV+ G +LVR ++ V M++ VRS + Sbjct: 811 ERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALA--DGVTMQVTVRSKE 859
>COPG_CAEEL (Q22498) Probable coatomer subunit gamma (Gamma-coat protein)| (Gamma-COP) Length = 870 Score = 107 bits (266), Expect = 4e-23 Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%) Frame = -2 Query: 645 LPYDSPGQTFVAFEKPEGVLATGKFSNILKFIVKEVDSSTGEAE-DDGVEDEYQLEDFEI 469 LPY F E P+ +G ILKF V +VD ++GE + DD E Y LE+ ++ Sbjct: 692 LPYGEVHSAFSLLEFPDSGAISGSLGAILKFKVMDVDPTSGEPDSDDTYEQTYVLEEVDV 751 Query: 468 ISADYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVSAVISILGMQPCEGTDV 289 +D + V S+F +AWE++ ++ R + + L EN+ +AV + ILG+ PCE +D Sbjct: 752 NVSDSVQGVAKSSFGSAWEALGDDATREETFQLSTVENIPDAVKKISEILGLVPCERSDR 811 Query: 288 VQNNSRSHTCLLSGVFIGNVKVLVRLSFGIS-GPKEVAMKLAVRSDDPEVSDRI 130 V HT LSGVF G VL + + + +AM + ++S++P V+D + Sbjct: 812 VPEGKTQHTVFLSGVFRGGYDVLSKATVAVDPNDNSIAMNIIIKSNEPLVADLV 865
>COPG_SCHPO (P87140) Probable coatomer subunit gamma (Gamma-coat protein)| (Gamma-COP) Length = 905 Score = 80.9 bits (198), Expect = 3e-15 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 4/178 (2%) Frame = -2 Query: 630 PGQTFVAFEKPEGV---LATGKFSNILKFIVKEVDSSTGEAEDDGVEDEYQLEDFEIISA 460 P FV+F+ + V L T +N L+F KE+D TGE E++G EDEY+++D ++ + Sbjct: 735 PVSIFVSFKFNDSVPYPLTT--LTNTLQFTTKEIDIHTGEPEEEGYEDEYKIDDLDVSAG 792 Query: 459 DYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVSAVISILGMQPCEGTDVVQN 280 D++ SNF ++S++ E+ V Y L + ++ S V +L MQP EGT+ Sbjct: 793 DFISPAYESNFDGLFDSLEHEASEV--YVLSLLDSFRSTCSRVAELLQMQPLEGTE-NPT 849 Query: 279 NSRSHTCLLSGVFIGNVKVLVRLSFGISGPKE-VAMKLAVRSDDPEVSDRIHEIVANG 109 + H LSG + KVL + S E + +K+ R + SD E+V G Sbjct: 850 DKPVHVMKLSGKLVNGEKVLALVKMAHSKDGEGITIKVIARGE----SDSSVELVVGG 903
>COPG_YEAST (P32074) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)| Length = 935 Score = 57.4 bits (137), Expect = 4e-08 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Frame = -2 Query: 618 FVAFEKPEGVLATGKFSNILKFIVKEVDSSTGEA--EDDGVEDEYQLEDFEIISADYMLK 445 +VAF+K + ++ G F N L F KE++ T E D+G +DEY+++ + + DY+ Sbjct: 768 YVAFKKLDEIVMEG-FLNNLTFTTKEINPDTNEPFDGDEGFQDEYEIDSIFLNAGDYVKS 826 Query: 444 VGVSNFRNAWESMDPESERVDEYGLGVRENLA--EAVSAVISILGMQPCEGTDVVQNNSR 271 NF ++ + E V ++E+L+ E V +I P E T ++S Sbjct: 827 SFTGNFSATFDELPCEEVAV----FNIQEDLSIQEVVDKIILNSSCLPVESTQFAPSDSN 882 Query: 270 SHTCLLSG-VFIGNVKVLVRLSFGISGPKEVAMKLAVRSDD 151 SHT L G + KV +++ I K +A+K+ + +D Sbjct: 883 SHTLKLFGKSALTGSKVALQIKM-IKSSKGLALKVHGKGED 922
>PCDB1_PANTR (Q5DRE0) Protocadherin beta 1 precursor (PCDH-beta1)| Length = 818 Score = 33.9 bits (76), Expect = 0.47 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%) Frame = -2 Query: 645 LPYDSPGQTFVAFE--KPEGVLATGKFSNILK----FIVKEVDSSTGEAEDDGVEDEYQL 484 LP DSP QT VA + + GK + L+ F++K ++ D D ++ Sbjct: 356 LPEDSPPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEV 415 Query: 483 EDFEI-----------ISADYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVS 337 + I +SA+ M++V +S+ + +P R D Y L VREN + AV Sbjct: 416 SGYNITLVAMDTGPPSLSAETMIEVLISDVND-----NPPIFREDSYILTVRENNSPAV- 469 Query: 336 AVISILGMQPCEGTDVVQNNSRSHTCL 256 +G E D+ +N +++ L Sbjct: 470 ----FIGKVHAEDLDLGENAQITYSLL 492
>PCDB1_HUMAN (Q9Y5F3) Protocadherin beta 1 precursor (PCDH-beta1)| Length = 818 Score = 33.9 bits (76), Expect = 0.47 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%) Frame = -2 Query: 645 LPYDSPGQTFVAFE--KPEGVLATGKFSNILK----FIVKEVDSSTGEAEDDGVEDEYQL 484 LP DSP QT VA + + GK + L+ F++K ++ D D ++ Sbjct: 356 LPEDSPPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEV 415 Query: 483 EDFEI-----------ISADYMLKVGVSNFRNAWESMDPESERVDEYGLGVRENLAEAVS 337 + I +SA+ M++V +S+ + +P R D Y L VREN + AV Sbjct: 416 SGYNITIVAMDTGPPSLSAETMIEVLISDVND-----NPPIFREDSYILTVRENNSPAV- 469 Query: 336 AVISILGMQPCEGTDVVQNNSRSHTCL 256 +G E D+ +N +++ L Sbjct: 470 ----FIGKVHAEDLDLGENAQITYSLL 492
>SAV1_MOUSE (Q8VEB2) Salvador homolog 1 protein (45 kDa WW domain protein)| (mWW45) Length = 386 Score = 33.1 bits (74), Expect = 0.80 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 6/108 (5%) Frame = +3 Query: 375 HTHRPAHFLDPCFPKHFGSSKPPPSTCNQQK*FQN--LLADTHPQHRHPQLHLWTNQPL* 548 HT++ A + PC P +PPP T Q+ +N LL +P H ++ W Sbjct: 256 HTNKRAQYRHPCAPSVPRYDQPPPITYQPQQTERNQSLLVPANPYHT-AEIPDW------ 308 Query: 549 Q*ISIYLRTSQWQGHLLAFQRPQ----RSVQGNHKVRILKASMQLLKI 680 + +Y R H+L ++ Q + QG K+ +K Q++K+ Sbjct: 309 --LQVYARAPVKYDHILKWELFQLADLDTYQGMLKLLFMKELEQIVKL 354
>SAV1_HUMAN (Q9H4B6) Salvador homolog 1 protein (45 kDa WW domain protein)| (hWW45) Length = 383 Score = 33.1 bits (74), Expect = 0.80 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 6/108 (5%) Frame = +3 Query: 375 HTHRPAHFLDPCFPKHFGSSKPPPSTCNQQK*FQN--LLADTHPQHRHPQLHLWTNQPL* 548 HT++ A + PC P +PPP T Q+ +N LL +P H ++ W Sbjct: 255 HTNKKAQYRHPCAPSVPRYDQPPPVTYQPQQTERNQSLLVPANPYHT-AEIPDW------ 307 Query: 549 Q*ISIYLRTSQWQGHLLAFQRPQ----RSVQGNHKVRILKASMQLLKI 680 + +Y R H+L ++ Q + QG K+ +K Q++K+ Sbjct: 308 --LQVYARAPVKYDHILKWELFQLADLDTYQGMLKLLFMKELEQIVKM 353
>TILS_HAEDU (Q7VPN7) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 428 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +1 Query: 241 EHT*KQASVRSRIVL-DNIGSLARLHAKDAYNSTHSLSQVLPNTKSILIDPLTFWIHAFP 417 +H + SV I L DN+G L R + Y TH +++L +S+ PLT +H Sbjct: 317 QHFCQILSVNQTIDLPDNLGQLTRQPQQIIYQQTHKTNRLL-LPESLRTVPLTIKLHQTG 375 Query: 418 SISEVRNPHLQHV 456 + ++PH + + Sbjct: 376 KVKRYQHPHSEEM 388
>UNG1_BACFR (Q64QI5) Uracil-DNA glycosylase 1 (EC 3.2.2.-) (UDG 1)| Length = 220 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -2 Query: 642 PYDSPGQTF-VAFEKPEGVLATGKFSNILKFIVKEV 538 PY +PGQ + + F P+GV G SNI K I +++ Sbjct: 66 PYPNPGQYYGICFSVPDGVAIPGSLSNIFKEIHQDL 101
>UNG1_BACFN (Q5LA67) Uracil-DNA glycosylase 1 (EC 3.2.2.-) (UDG 1)| Length = 220 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -2 Query: 642 PYDSPGQTF-VAFEKPEGVLATGKFSNILKFIVKEV 538 PY +PGQ + + F P+GV G SNI K I +++ Sbjct: 66 PYPNPGQYYGICFSVPDGVAIPGSLSNIFKEIHQDL 101
>ATPG_PELUB (Q4FP37) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 291 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Frame = -2 Query: 663 SKPLRSLPYDSPGQTFVA-FEKPEGVLAT---GKFSNILKFIVKE---VDSSTGEAEDDG 505 SK + L + G+ + FEK E + T KF N++ I +E + T EAE++ Sbjct: 146 SKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNKFKNVITQIPQEQQIIPLKTSEAEENS 205 Query: 504 VEDEYQLEDFE 472 ED Y+ E E Sbjct: 206 SEDNYEFEPDE 216
>Y273_CHLMU (Q9PL35) Hypothetical protein TC0273| Length = 367 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 256 QASVRSRIVLDNIGSLARLHAKDAYNSTHSLSQVLPNTKSILIDPL 393 + S+RS VL S + L K+ + +T ++ + LPNTKSIL PL Sbjct: 224 ERSLRSEEVLH---SQSLLRQKELFPNTSNIKKELPNTKSILHTPL 266
>SLS1_YEAST (P42900) Sigma-like sequence protein 1, mitochondrial precursor| (Protein SLS1) Length = 643 Score = 30.4 bits (67), Expect = 5.2 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +2 Query: 110 PFATISWILSLTSGSSDLTASFMATSFGPLIPNDSLTKTFTLPMNTPESRQVCDLELFWT 289 P +IS LS+T G S +ASF ++ F PLI ++K LPM S + Sbjct: 386 PSDSISQSLSITLGHSLQSASF-SSIFQPLIHKSFISKLLNLPMYKESS----------S 434 Query: 290 TSVPSQGCMPRMLIT-ALTASAKFSLTPSP 376 ++VP + + LIT A + + + TP P Sbjct: 435 SAVPVPVPLDQHLITNAHQSFIQLNFTPVP 464
>PTR1_SCHPO (O13834) E3 ubiquitin protein ligase ptr1 (EC 6.3.2.-) (Poly(A)+ RNA| transport protein 1) Length = 3227 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -2 Query: 552 IVKEVDSSTGEAEDDGVEDEYQLEDFEIISAD 457 IV E D + ++EDDGV +E + ED + SAD Sbjct: 1849 IVNENDENYEDSEDDGVYEEMEFEDDQSGSAD 1880
>NUGC_WHEAT (Q95H60) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) Length = 159 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -2 Query: 249 GVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDDPEV 142 G + +V L R+ +GI P+EV +K+ + D+P + Sbjct: 63 GGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRI 98
>NUGC_SACOF (Q6ENW0) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) Length = 159 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -2 Query: 249 GVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDDPEV 142 G + +V L R+ +GI P+EV +K+ + D+P + Sbjct: 63 GGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRI 98
>NUGC_SACHY (Q6L396) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) Length = 159 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -2 Query: 249 GVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDDPEV 142 G + +V L R+ +GI P+EV +K+ + D+P + Sbjct: 63 GGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRI 98
>NUGC_ORYSA (P12200) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) Length = 159 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -2 Query: 249 GVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDDPEV 142 G + +V L R+ +GI P+EV +K+ + D+P + Sbjct: 63 GGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRI 98
>NUGC_ORYNI (Q6ENH1) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) Length = 159 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -2 Query: 249 GVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDDPEV 142 G + +V L R+ +GI P+EV +K+ + D+P + Sbjct: 63 GGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRI 98
>NUGC_MAIZE (P19124) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) Length = 159 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -2 Query: 249 GVFIGNVKVLVRLSFGISGPKEVAMKLAVRSDDPEV 142 G + +V L R+ +GI P+EV +K+ + D+P + Sbjct: 63 GGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRI 98
>OSTA_XANOR (Q5GWC2) Organic solvent tolerance protein precursor| Length = 813 Score = 30.4 bits (67), Expect = 5.2 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = -2 Query: 651 RSLPYDSPGQTFVAFEKPEGVLATGKFSNILK-------FIVKEVDSSTGEAEDDGVEDE 493 RSLPY+ + + +EKP G+ G ++ ++ F+ S GEA + D+ Sbjct: 376 RSLPYNRQPRAYFNWEKPFGIFEAGVYAEAVRFTHDDSYFVQPPSPSVPGEANNRDNNDK 435 Query: 492 Y 490 Y Sbjct: 436 Y 436
>OSTA_XANCP (Q8PCE0) Organic solvent tolerance protein precursor| Length = 809 Score = 30.0 bits (66), Expect = 6.8 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -2 Query: 651 RSLPYDSPGQTFVAFEKPEGVLATGKFSNILKF 553 RSLPY+ + + +EKP G+ G ++ ++F Sbjct: 376 RSLPYNRQPRAYFTWEKPFGIFEAGVYAEAVRF 408
>TIG_BARHE (Q6G3Y8) Trigger factor (TF)| Length = 469 Score = 30.0 bits (66), Expect = 6.8 Identities = 15/49 (30%), Positives = 29/49 (59%) Frame = -2 Query: 609 FEKPEGVLATGKFSNILKFIVKEVDSSTGEAEDDGVEDEYQLEDFEIIS 463 FE PEG+L +F+NI + ++ + ED+GV +E E++ +++ Sbjct: 302 FEIPEGLLEI-EFNNIWAQVNDDLKKAGRSFEDEGVTEEQAREEYRVLA 349
>PEPE_PASMU (Q9CNH7) Peptidase E (EC 3.4.13.21) (Alpha-aspartyl dipeptidase)| (Asp-specific dipeptidase) (Dipeptidase E) Length = 234 Score = 29.6 bits (65), Expect = 8.9 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 11/93 (11%) Frame = -2 Query: 384 DEYGLGVRENLAEAVSAVISILGMQP----CEGTDVVQNNSRSHTCLLSGVFIGNVKVLV 217 DEY L V++ LAE A++S+ + E DV+ + CLL G++ ++ L+ Sbjct: 50 DEYELKVQKALAELNVAILSVHRAEKHAEIIEKADVIAIGGGNTFCLLKGMYEHHLLPLI 109 Query: 216 RLS-------FGISGPKEVAMKLAVRSDDPEVS 139 R FG S VA + + ++D ++ Sbjct: 110 REKVQSGTPYFGWSAGANVAGRSIMTTNDMPIT 142
>OSTA_XANAC (Q8PP22) Organic solvent tolerance protein precursor| Length = 813 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = -2 Query: 651 RSLPYDSPGQTFVAFEKPEGVLATGKFSNILK-------FIVKEVDSSTGEAEDDGVEDE 493 ++LPY+ + + +EKP G+ G ++ ++ F+ S+ GE + DE Sbjct: 376 QALPYNRQPRAYFTWEKPFGIFEAGVYAEAVRFTHDDSYFVQPPSPSAPGETNNRDDNDE 435 Query: 492 Y 490 Y Sbjct: 436 Y 436
>TIG_BARQU (Q6FZK6) Trigger factor (TF)| Length = 469 Score = 29.6 bits (65), Expect = 8.9 Identities = 14/49 (28%), Positives = 30/49 (61%) Frame = -2 Query: 609 FEKPEGVLATGKFSNILKFIVKEVDSSTGEAEDDGVEDEYQLEDFEIIS 463 FE PEG+L +F+NI + ++ + ED+GV +++ E++ +++ Sbjct: 302 FEIPEGLLEI-EFNNIWAQVNDDLKKAGRSFEDEGVTEKHAREEYRVLA 349 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,993,508 Number of Sequences: 219361 Number of extensions: 1839543 Number of successful extensions: 5346 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5338 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
