ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags34j02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188318.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 415 caccgttggtgctgcttccaaatgcaaactcgtcagaaaccacgtccatcatgtgaacgt 474 ||||||| ||||||||||||||||||||||| ||||||||| | |||||||| |||| | Sbjct: 949 caccgtttgtgctgcttccaaatgcaaactcatcagaaaccgcatccatcatatgaatat 890 Query: 475 ccgggtgccgcgccatgccggggatcaccggcgagcacgtgccgctctgccccggcgtgc 534 | ||||| | |||||||| || ||| | || ||||| |||||||| ||||| ||||||| Sbjct: 889 ctgggtgtggtgccatgccaggaatcgcaggggagcatgtgccgctttgccctggcgtgc 830 Query: 535 acatcct 541 ||||||| Sbjct: 829 acatcct 823 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 324 agagtgagctccagctcgtccgacccagagtcctcgtggatcctctcgccctcccacgcc 383 ||||| ||||| || |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 1034 agagtcagctctaggtcgtccgatcccgagtcctcgtggatcctctcgccttcccacgcc 975 Query: 384 ctcacca 390 ||||||| Sbjct: 974 ctcacca 968
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 415 caccgttggtgctgcttccaaatgcaaactcgtcagaaaccacgtccatcatgtgaacgt 474 ||||||| ||||||||||||||||||||||| ||||||||| | |||||||| |||| | Sbjct: 5668404 caccgtttgtgctgcttccaaatgcaaactcatcagaaaccgcatccatcatatgaatat 5668463 Query: 475 ccgggtgccgcgccatgccggggatcaccggcgagcacgtgccgctctgccccggcgtgc 534 | ||||| | |||||||| || ||| | || ||||| |||||||| ||||| ||||||| Sbjct: 5668464 ctgggtgtggtgccatgccaggaatcgcaggggagcatgtgccgctttgccctggcgtgc 5668523 Query: 535 acatcct 541 ||||||| Sbjct: 5668524 acatcct 5668530 Score = 101 bits (51), Expect = 3e-18 Identities = 75/81 (92%), Gaps = 4/81 (4%) Strand = Plus / Plus Query: 145 ataaataacacaattatcatcacaacaagtgaatctaatctgaaggaaccacacgcttgg 204 |||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||| Sbjct: 5668153 ataaataacacaattatcatcacaac---tgaagcta-tctgaaggaaccacacgattgg 5668208 Query: 205 tctctctttcagaaactaatg 225 ||||||||||||||||||||| Sbjct: 5668209 tctctctttcagaaactaatg 5668229 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 324 agagtgagctccagctcgtccgacccagagtcctcgtggatcctctcgccctcccacgcc 383 ||||| ||||| || |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 5668319 agagtcagctctaggtcgtccgatcccgagtcctcgtggatcctctcgccttcccacgcc 5668378 Query: 384 ctcacca 390 ||||||| Sbjct: 5668379 ctcacca 5668385
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 415 caccgttggtgctgcttccaaatgcaaactcgtcagaaaccacgtccatcatgtgaacgt 474 ||||||| ||||||||||||||||||||||| ||||||||| | |||||||| |||| | Sbjct: 133877 caccgtttgtgctgcttccaaatgcaaactcatcagaaaccgcatccatcatatgaatat 133936 Query: 475 ccgggtgccgcgccatgccggggatcaccggcgagcacgtgccgctctgccccggcgtgc 534 | ||||| | |||||||| || ||| | || ||||| |||||||| ||||| ||||||| Sbjct: 133937 ctgggtgtggtgccatgccaggaatcgcaggggagcatgtgccgctttgccctggcgtgc 133996 Query: 535 acatcct 541 ||||||| Sbjct: 133997 acatcct 134003 Score = 101 bits (51), Expect = 3e-18 Identities = 75/81 (92%), Gaps = 4/81 (4%) Strand = Plus / Plus Query: 145 ataaataacacaattatcatcacaacaagtgaatctaatctgaaggaaccacacgcttgg 204 |||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||| Sbjct: 133626 ataaataacacaattatcatcacaac---tgaagcta-tctgaaggaaccacacgattgg 133681 Query: 205 tctctctttcagaaactaatg 225 ||||||||||||||||||||| Sbjct: 133682 tctctctttcagaaactaatg 133702 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 324 agagtgagctccagctcgtccgacccagagtcctcgtggatcctctcgccctcccacgcc 383 ||||| ||||| || |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 133792 agagtcagctctaggtcgtccgatcccgagtcctcgtggatcctctcgccttcccacgcc 133851 Query: 384 ctcacca 390 ||||||| Sbjct: 133852 ctcacca 133858
>dbj|AK067471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107L10, full insert sequence Length = 1236 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 415 caccgttggtgctgcttccaaatgcaaactcgtcagaaaccacgtccatcatgtgaacgt 474 ||||||| ||||||||||||||||||||||| ||||||||| | |||||||| |||| | Sbjct: 1123 caccgtttgtgctgcttccaaatgcaaactcatcagaaaccgcatccatcatatgaatat 1064 Query: 475 ccgggtgccgcgccatgccggggatcaccggcgagcacgtgccgctctgccccggcgtgc 534 | ||||| | |||||||| || ||| | || ||||| |||||||| ||||| ||||||| Sbjct: 1063 ctgggtgtggtgccatgccaggaatcgcaggggagcatgtgccgctttgccctggcgtgc 1004 Query: 535 acatcct 541 ||||||| Sbjct: 1003 acatcct 997 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 324 agagtgagctccagctcgtccgacccagagtcctcgtggatcctctcgccctcccacgcc 383 ||||| ||||| || |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 1208 agagtcagctctaggtcgtccgatcccgagtcctcgtggatcctctcgccttcccacgcc 1149 Query: 384 ctcacca 390 ||||||| Sbjct: 1148 ctcacca 1142
>ref|XM_478876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 355 cctcgtggatcctctcgccctccca 379 ||||||||||||||||||||||||| Sbjct: 910 cctcgtggatcctctcgccctccca 886
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 355 cctcgtggatcctctcgccctccca 379 ||||||||||||||||||||||||| Sbjct: 23430690 cctcgtggatcctctcgccctccca 23430714
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 355 cctcgtggatcctctcgccctccca 379 ||||||||||||||||||||||||| Sbjct: 50587 cctcgtggatcctctcgccctccca 50611
>dbj|AK106748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-C06, full insert sequence Length = 1206 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 355 cctcgtggatcctctcgccctccca 379 ||||||||||||||||||||||||| Sbjct: 910 cctcgtggatcctctcgccctccca 886
>gb|AE004325.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 233 of 251 of the complete chromosome Length = 10808 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 199 gcttggtctctctttcagaaac 220 |||||||||||||||||||||| Sbjct: 5284 gcttggtctctctttcagaaac 5263
>gb|AC005060.3| Homo sapiens BAC clone CTB-86D3 from 7, complete sequence Length = 120169 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 aagaagaagaagaaataagcta 258 |||||||||||||||||||||| Sbjct: 99738 aagaagaagaagaaataagcta 99759
>gb|AC161592.2| Mus musculus BAC clone RP24-252H17 from chromosome 13, complete sequence Length = 186026 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 caagaaagaagaagaagaaata 253 |||||||||||||||||||||| Sbjct: 16357 caagaaagaagaagaagaaata 16378
>gb|AC093925.5| Genomic sequence for Mus musculus, clone RP23-304H5, complete sequence Length = 227242 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 ggccagccatgctgggtcagga 668 |||||||||||||||||||||| Sbjct: 44496 ggccagccatgctgggtcagga 44475
>gb|AC154665.2| Mus musculus BAC clone RP24-284M11 from chromosome 13, complete sequence Length = 185286 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 caagaaagaagaagaagaaata 253 |||||||||||||||||||||| Sbjct: 182401 caagaaagaagaagaagaaata 182422
>gb|BC109131.1| Mus musculus ovary testis transcribed, mRNA (cDNA clone MGC:129142 IMAGE:40038981), complete cds Length = 1822 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 329 agctacaacaagaaagaatcc 349
>ref|XM_419670.1| PREDICTED: Gallus gallus similar to iodotyrosine dehalogenase 1 protein (LOC421631), mRNA Length = 2664 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 aagaagaagaagaaataagctacaa 261 |||||||||||||||||| |||||| Sbjct: 1610 aagaagaagaagaaataaactacaa 1634
>ref|XM_706557.1| Candida albicans SC5314 spindle pole antigen (CaO19.13719), mRNA Length = 4401 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 accaagaaagaagaagaagaa 250 ||||||||||||||||||||| Sbjct: 3409 accaagaaagaagaagaagaa 3429
>ref|XM_706488.1| Candida albicans SC5314 spindle pole antigen (CaO19.6362), mRNA Length = 4401 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 accaagaaagaagaagaagaa 250 ||||||||||||||||||||| Sbjct: 3409 accaagaaagaagaagaagaa 3429
>ref|XM_356360.4| PREDICTED: Mus musculus similar to ovary testis transcribed (LOC382244), mRNA Length = 2026 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|XM_897991.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 3 (LOC434869), mRNA Length = 1973 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_486794.3| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 1 (LOC434869), mRNA Length = 2029 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|XM_982791.1| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 2 (LOC666260), mRNA Length = 1972 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_982837.1| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 3 (LOC666260), mRNA Length = 1972 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_982748.1| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 1 (LOC666260), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_897881.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 3 (LOC434865), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_897890.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 4 (LOC434865), mRNA Length = 1946 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 329 agctacaacaagaaagaatcc 349
>ref|XM_888090.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 2 (LOC434865), mRNA Length = 2017 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_486789.4| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 1 (LOC434865), mRNA Length = 2025 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|XM_897851.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 4 (LOC434866), mRNA Length = 1415 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 351 agctacaacaagaaagaatcc 371
>ref|XM_897822.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 2 (LOC434866), mRNA Length = 2017 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 351 agctacaacaagaaagaatcc 371
>ref|XM_486790.4| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 1 (LOC434866), mRNA Length = 2026 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|XM_897795.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 3 (LOC434864), mRNA Length = 1949 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 329 agctacaacaagaaagaatcc 349
>ref|XM_897785.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 2 (LOC434864), mRNA Length = 1415 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 351 agctacaacaagaaagaatcc 371
>ref|XM_897803.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 4 (LOC434864), mRNA Length = 2019 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 351 agctacaacaagaaagaatcc 371
>ref|XM_486787.3| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 1 (LOC434864), mRNA Length = 2028 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|XM_982050.1| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 1 (LOC666184), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_982089.1| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 2 (LOC666184), mRNA Length = 1950 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 329 agctacaacaagaaagaatcc 349
>ref|XM_982132.1| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 3 (LOC666184), mRNA Length = 2021 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 352 agctacaacaagaaagaatcc 372
>ref|XM_982169.1| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 4 (LOC666184), mRNA Length = 2029 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|XM_897719.2| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 3 (LOC434863), mRNA Length = 1948 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 329 agctacaacaagaaagaatcc 349
>ref|XM_486785.3| PREDICTED: Mus musculus similar to ovary testis transcribed, transcript variant 1 (LOC434863), mRNA Length = 2027 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|XM_388680.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08504.1) partial mRNA Length = 921 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 agcaacaccgttggtgctgct 430 ||||||||||||||||||||| Sbjct: 811 agcaacaccgttggtgctgct 831
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ccaagaaagaagaagaagaaa 251 ||||||||||||||||||||| Sbjct: 35460 ccaagaaagaagaagaagaaa 35480
>gb|AC112520.5| Mus musculus BAC clone RP23-2N4 from 12, complete sequence Length = 233153 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 accaagaaagaagaagaagaa 250 ||||||||||||||||||||| Sbjct: 25409 accaagaaagaagaagaagaa 25429
>emb|CR846088.7| Zebrafish DNA sequence from clone DKEY-189L3 in linkage group 11, complete sequence Length = 162255 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaataagct 257 ||||||||||||||||||| ||||| Sbjct: 12726 aagaaagaagaagaagaaaaaagct 12750
>ref|XM_665128.1| Plasmodium berghei strain ANKA hypothetical protein (PB405875.00.0) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 agaaagaagaagaagaaataa 254 ||||||||||||||||||||| Sbjct: 492 agaaagaagaagaagaaataa 512
>ref|XM_670931.1| Plasmodium berghei strain ANKA U2 snRNP auxiliary factor, (PB001017.03.0) partial mRNA Length = 1893 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 agaaagaagaagaagaaataa 254 ||||||||||||||||||||| Sbjct: 303 agaaagaagaagaagaaataa 323
>emb|AL355989.11| Human DNA sequence from clone RP11-272J7 on chromosome 10 Contains a transcription elongation factor B (SIII) pseudogene, a novel gene, a heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) pseudogene gene and a CpG island, complete sequence Length = 161451 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaata 253 ||||||||||||||||||||| Sbjct: 149626 aagaaagaagaagaagaaata 149646
>emb|AL162499.20| Human DNA sequence from clone RP11-315H15 on chromosome 13 Contains part of a novel gene and a CpG island, complete sequence Length = 140907 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgaggccaccagctgtggagg 87 ||||||||||||||||||||| Sbjct: 139430 cgaggccaccagctgtggagg 139450 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gaggccaccagctgtggagg 87 |||||||||||||||||||| Sbjct: 137335 gaggccaccagctgtggagg 137316
>gb|AC087234.9| Homo sapiens 12 BAC RP11-692M23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 42140 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataagc 256 ||||||||||||||||||||| Sbjct: 8463 aaagaagaagaagaaataagc 8483
>emb|AL731774.11| Mouse DNA sequence from clone RP23-61E13 on chromosome X, complete sequence Length = 224475 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 138523 agctacaacaagaaagaatcc 138543
>emb|AL672021.11| Mouse DNA sequence from clone RP23-463M4 on chromosome X, complete sequence Length = 195259 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 138716 agctacaacaagaaagaatcc 138736
>emb|BX679667.8| Mouse DNA sequence from clone RP24-424A15 on chromosome X, complete sequence Length = 79203 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 24755 agctacaacaagaaagaatcc 24775
>emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chromosome X, complete sequence Length = 87723 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 41916 agctacaacaagaaagaatcc 41936
>gb|U40424.1| Caenorhabditis elegans cosmid C24A3, complete sequence Length = 25195 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaata 253 ||||||||||||||||||||| Sbjct: 4969 aagaaagaagaagaagaaata 4989
>emb|CR387995.6| Mouse DNA sequence from clone RP23-18L17 on chromosome X, complete sequence Length = 224892 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 193700 agctacaacaagaaagaatcc 193680 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 26838 agctacaacaagaaagaatcc 26818
>gb|AC004882.3| Homo sapiens PAC clone RP1-76B20 from 22, complete sequence Length = 171682 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 ccctcccacgccctcaccaat 392 ||||||||||||||||||||| Sbjct: 140435 ccctcccacgccctcaccaat 140415
>gb|AC154105.2| Mus musculus BAC clone RP24-457N12 from chromosome 12, complete sequence Length = 237236 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 accaagaaagaagaagaagaa 250 ||||||||||||||||||||| Sbjct: 199518 accaagaaagaagaagaagaa 199538
>emb|BX649624.8| Mouse DNA sequence from clone RP23-263M8 on chromosome X, complete sequence Length = 167883 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 138379 agctacaacaagaaagaatcc 138399 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 4689 agctacaacaagaaagaatcc 4709
>emb|BX890554.6| Mouse DNA sequence from clone RP23-291C10 on chromosome X, complete sequence Length = 169236 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 42035 agctacaacaagaaagaatcc 42055
>gb|AC005840.2|AC005840 Homo sapiens complete sequence of a PAC clone RP1-102E24 containing SYB1, CD27, and SCNN1A genes Length = 140026 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaata 253 ||||||||||||||||||||| Sbjct: 76480 aagaaagaagaagaagaaata 76500
>emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chromosome X, complete sequence Length = 191028 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 26937 agctacaacaagaaagaatcc 26957
>emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chromosome X, complete sequence Length = 227248 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 190180 agctacaacaagaaagaatcc 190200 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 27887 agctacaacaagaaagaatcc 27907
>emb|AL772200.10| Mouse DNA sequence from clone RP23-265N8 on chromosome X, complete sequence Length = 195289 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 62332 agctacaacaagaaagaatcc 62352
>emb|AL671630.10| Mouse DNA sequence from clone RP23-327E13 on chromosome X, complete sequence Length = 173634 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 95436 agctacaacaagaaagaatcc 95456
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 accaagaaagaagaagaagaa 250 ||||||||||||||||||||| Sbjct: 149614 accaagaaagaagaagaagaa 149594
>emb|CT573011.11| Mouse DNA sequence from clone RP23-330P11 on chromosome X, complete sequence Length = 104602 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 17882 agctacaacaagaaagaatcc 17902
>gb|BC109132.1| Mus musculus similar to ovary testis transcribed, mRNA (cDNA clone MGC:129143 IMAGE:40038983), complete cds Length = 1773 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 329 agctacaacaagaaagaatcc 349
>ref|NM_011022.1| Mus musculus ovary testis transcribed (Ott), mRNA Length = 2034 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>ref|NM_001037716.1| Mus musculus similar to ovary testis transcribed (LOC382243), mRNA Length = 1773 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 329 agctacaacaagaaagaatcc 349
>emb|X96606.1|MMOTTAK27 M.musculus mRNA for Ott protein, clone ak27 Length = 2034 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 360 agctacaacaagaaagaatcc 380
>emb|X96604.1|MMOTTM11 M.musculus mRNA for Ott protein, clone m11 Length = 1683 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 54 agctacaacaagaaagaatcc 74
>emb|X96605.1|MMOTTM1 M.musculus mRNA for Ott protein, clone m1 Length = 880 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agctacaacaagaaagaatcc 274 ||||||||||||||||||||| Sbjct: 31 agctacaacaagaaagaatcc 51
>ref|NM_105864.1| Arabidopsis thaliana serine-type endopeptidase inhibitor AT1G72060 mRNA, complete cds Length = 461 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 405 aagaaagaagaagaagaaat 386
>ref|NM_105234.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT1G65610 mRNA, complete cds Length = 2115 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 agaaagaagaagaagaaata 253 |||||||||||||||||||| Sbjct: 280 agaaagaagaagaagaaata 299
>ref|NM_105865.2| Arabidopsis thaliana heat shock protein binding / unfolded protein binding AT1G72070 mRNA, complete cds Length = 705 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 377 aagaaagaagaagaagaaat 396
>ref|NM_115196.1| Arabidopsis thaliana unknown protein AT3G53360 mRNA, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 tgcttccaaatgcaaactcgtcag 450 |||||||||||||||||| ||||| Sbjct: 520 tgcttccaaatgcaaactggtcag 497
>gb|AC123713.13| Mus musculus chromosome 7, clone RP23-391D20, complete sequence Length = 183590 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 165628 aaagaagaagaagaaataag 165609
>gb|AC150257.12| Aedes aegypti, clone XX-97O18, complete sequence Length = 124122 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 102395 aagaaagaagaagaagaaat 102414
>ref|XM_467179.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2872 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 acaccaagaaagaagaagaa 247 |||||||||||||||||||| Sbjct: 309 acaccaagaaagaagaagaa 328
>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence Length = 199827 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 153463 aaagaagaagaagaaataag 153482
>gb|AE001377.2| Plasmodium falciparum 3D7 chromosome 2 section 14 of 73 of the complete sequence Length = 12469 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 5605 aaagaagaagaagaaataag 5586
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 462 atcatgtgaacgtccgggtgccgcgcca 489 ||||||| ||||||||||||||||||| Sbjct: 999251 atcatgtccacgtccgggtgccgcgcca 999224
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 65521 aagaaagaagaagaagaaat 65502
>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence Length = 237945 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 233359 caagaaagaagaagaagaaa 233378
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 22945 caagaaagaagaagaagaaa 22926
>gb|AC101800.8| Mus musculus chromosome 1, clone RP24-219K10, complete sequence Length = 177147 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 36646 aagaaagaagaagaagaaat 36665
>gb|AC113001.9| Mus musculus chromosome 7, clone RP23-184M4, complete sequence Length = 206940 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 19682 aaagaagaagaagaaataag 19701
>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08, complete sequence Length = 95638 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 75607 caagaaagaagaagaagaaa 75588
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 635 gatctggatgccggccagcc 654 |||||||||||||||||||| Sbjct: 3330208 gatctggatgccggccagcc 3330189
>gb|AY150085.1| Neosuccinea kofui isolate NK cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 660 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agaaagaagaagaagaaata 253 |||||||||||||||||||| Sbjct: 540 agaaagaagaagaagaaata 521
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 gatcaccggcgagcacgtgccgct 520 ||||||||||||||| |||||||| Sbjct: 647684 gatcaccggcgagcaggtgccgct 647661
>gb|U50629.1|SAU50629 Staphylococcus aureus plasmid pGO1 orf 2 gene, partial cds; and nicking enzyme (nes) gene, complete cds Length = 2348 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 2286 aagaaagaagaagaagaaat 2267
>ref|XM_803662.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510269.20) partial mRNA Length = 1278 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aacaccaagaaagaagaaga 246 |||||||||||||||||||| Sbjct: 1021 aacaccaagaaagaagaaga 1040
>ref|XM_798558.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053510107.15) partial mRNA Length = 715 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 330 caagaaagaagaagaagaaa 349
>gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complete sequence Length = 225940 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 190211 aagaaagaagaagaagaaat 190230
>ref|XM_807061.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053508047.11) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 330 caagaaagaagaagaagaaa 349
>gb|AC122880.4| Mus musculus BAC clone RP23-77F18 from 8, complete sequence Length = 189549 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 aagaagaagaagaaataagc 256 |||||||||||||||||||| Sbjct: 171166 aagaagaagaagaaataagc 171185
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 7018 ccaagaaagaagaagaagaa 7037
>gb|AY372455.1| Uncultured marine alpha proteobacterium HOT2C01 fosmid clone Length = 42242 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 5399 aaagaagaagaagaaataag 5380
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 118536 ccaagaaagaagaagaagaa 118555
>emb|AL445071.15| Human DNA sequence from clone RP11-460H18 on chromosome 10 Contains a peptidylprolyl isomerase A (cyclophilin A) (PPIA)(CYPA, CYPH) pseudogene, a ribosomal protein S24 (RPS24) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 151478 Score = 40.1 bits (20), Expect = 9.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 227 aacaccaaga-aagaagaagaagaaata 253 |||||||||| ||||||||||||||||| Sbjct: 89480 aacaccaagataagaagaagaagaaata 89453
>emb|AL353813.12| Human DNA sequence from clone RP11-79D8 on chromosome 9 Contains the TLE4 gene for transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4) and a novel pseudogene (BCE-1), complete sequence Length = 192966 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 acaccaagaaagaagaagaagaaa 251 |||||| ||||||||||||||||| Sbjct: 181948 acaccaggaaagaagaagaagaaa 181925
>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33 Contains the 3' ends of genes FLJ34719 and KIAA0191, complete sequence Length = 127006 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 115032 caagaaagaagaagaagaaa 115013
>emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on chromosome 9q32-33.3 Contains the 5' end of one variant of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2) and a CpG island, complete sequence Length = 133394 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 105337 aagaaagaagaagaagaaat 105318
>emb|AL132658.10|HSBA59J12 Human DNA sequence from clone RP11-59J12 on chromosome 10, complete sequence Length = 20090 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 19197 aagaaagaagaagaagaaat 19178
>emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085F17 on chromosome 20q11.1-11.23 Contains the DNMT3B gene encoding DNA Cytosine-5 Methyltransferase 3 beta, the MAPRE1 gene encoding a microtubule-associated protein, RP/EB family, member 1, part of a novel gene, ESTs, STSs, GSSs, and three CpG islands, complete sequence Length = 118899 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 aagaagaagaagaaataagc 256 |||||||||||||||||||| Sbjct: 110454 aagaagaagaagaaataagc 110435
>gb|AC108743.6| Homo sapiens 3 BAC RP11-206J21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143682 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 115687 aagaaagaagaagaagaaat 115706
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 784664 aagaaagaagaagaagaaat 784645
>emb|AL645702.14| Mouse DNA sequence from clone RP23-163J17 on chromosome 1 Contains a ribosomal protein S2 (Rps2) pseudogene, a tigger transposable element derived 1 (TIGD1) pseudogene and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 205103 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 183126 aagaaagaagaagaagaaat 183145
>gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, complete sequence Length = 174556 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ttttctgacattaatttaca 23 |||||||||||||||||||| Sbjct: 98380 ttttctgacattaatttaca 98361
>gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosome 12, complete sequence Length = 200606 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 49048 aaagaagaagaagaaataag 49067
>gb|AF038613.2| Caenorhabditis elegans cosmid F42A6, complete sequence Length = 38222 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 11395 aagaaagaagaagaagaaat 11414
>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence Length = 152794 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 82453 aagaaagaagaagaagaaat 82472
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cggccaaagcgaggccaccagctg 81 |||||| ||||||||||||||||| Sbjct: 4386859 cggccatagcgaggccaccagctg 4386882
>gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 map 7, complete sequence Length = 223438 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 25662 aaagaagaagaagaaataag 25643
>gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complete sequence Length = 220568 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 167959 aagaaagaagaagaagaaat 167940
>gb|AC005312.3| Arabidopsis thaliana chromosome 2 clone T16F16 map CIC11A04, complete sequence Length = 74903 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 3041 aaagaagaagaagaaataag 3060
>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence Length = 135692 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 53368 aagaaagaagaagaagaaat 53387
>gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete sequence Length = 132056 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 111172 aagaaagaagaagaagaaat 111153
>gb|AC024791.1| Caenorhabditis elegans cosmid Y47G6A, complete sequence Length = 194322 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 170247 aaagaagaagaagaaataag 170266
>gb|AC091900.3| Homo sapiens chromosome 5 clone RP11-158K14, complete sequence Length = 180679 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 aataaataacacaattatcatcac 167 |||||||||||||| ||||||||| Sbjct: 8880 aataaataacacaaatatcatcac 8903
>gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence Length = 190534 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ttttctgacattaatttaca 23 |||||||||||||||||||| Sbjct: 160523 ttttctgacattaatttaca 160542
>gb|AC091005.9| Homo sapiens chromosome 15, clone RP11-1008C21, complete sequence Length = 168502 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 caaataaataacacaattat 161 |||||||||||||||||||| Sbjct: 71505 caaataaataacacaattat 71524
>gb|AC093505.2| Homo sapiens chromosome 5 clone CTD-2010M15, complete sequence Length = 131489 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 aataaataacacaattatcatcac 167 |||||||||||||| ||||||||| Sbjct: 119758 aataaataacacaaatatcatcac 119781
>gb|AC161052.2| Mus musculus BAC clone RP23-393J15 from chromosome 12, complete sequence Length = 201284 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gaaagaagaagaagaaataa 254 |||||||||||||||||||| Sbjct: 5370 gaaagaagaagaagaaataa 5351
>gb|AC155635.3| Mus musculus BAC clone RP24-252C1 from chromosome 9, complete sequence Length = 154485 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 114895 caagaaagaagaagaagaaa 114914
>ref|NM_065379.3| Caenorhabditis elegans BRCa homolog (tumor suppressor gene Brca1) family member (brc-1) (brc-1) mRNA, complete cds Length = 1738 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 1670 aagaaagaagaagaagaaat 1651
>emb|BX649496.12| Zebrafish DNA sequence from clone CH211-212I24 in linkage group 18, complete sequence Length = 243552 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 74329 caagaaagaagaagaagaaa 74310
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 22334280 ccaagaaagaagaagaagaa 22334261
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 784664 aagaaagaagaagaagaaat 784645
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tttctgacattaatttacat 24 |||||||||||||||||||| Sbjct: 27520463 tttctgacattaatttacat 27520482 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 23262182 aaagaagaagaagaaataag 23262163 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 gctcccgagagtgagctccagctc 340 |||||| ||||||||||||||||| Sbjct: 20595943 gctcccaagagtgagctccagctc 20595920 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 666335 ccaagaaagaagaagaagaa 666316
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 26378254 caagaaagaagaagaagaaa 26378235
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 acaccaagaaagaagaagaa 247 |||||||||||||||||||| Sbjct: 26870878 acaccaagaaagaagaagaa 26870897
>gb|AC012167.5|AC012167 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone BACR27M17, complete sequence Length = 164443 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attatcatcacaacaagtga 176 |||||||||||||||||||| Sbjct: 74744 attatcatcacaacaagtga 74725
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 234858 ccaagaaagaagaagaagaa 234877
>gb|AY819037.1| Symphonia globulifera clone Sg06 microsatellite sequence Length = 215 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 200 ccaagaaagaagaagaagaa 181
>gb|AC020698.4| Homo sapiens BAC clone RP11-45F23 from 4, complete sequence Length = 148418 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 taatccacacaaataaataa 152 |||||||||||||||||||| Sbjct: 785 taatccacacaaataaataa 804
>gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166910 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 49756 caagaaagaagaagaagaaa 49775
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 50632 aagaaagaagaagaagaaat 50651
>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete sequence Length = 38629 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 22455 aagaaagaagaagaagaaat 22474
>gb|AC008604.5|AC008604 Homo sapiens chromosome 5 clone CTB-109F8, complete sequence Length = 108976 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 aataaataacacaattatcatcac 167 |||||||||||||| ||||||||| Sbjct: 30230 aataaataacacaaatatcatcac 30207
>gb|AC007682.3| Homo sapiens BAC clone RP11-391D19 from 2, complete sequence Length = 189968 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gaagaaataagctacaacaagaaa 268 ||||||| |||||||||||||||| Sbjct: 84438 gaagaaaaaagctacaacaagaaa 84461
>gb|AC092533.1| Homo sapiens BAC clone RP11-57I10 from 2, complete sequence Length = 121688 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 56323 aagaaagaagaagaagaaat 56304
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 72763 ccaagaaagaagaagaagaa 72744
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 gctcccgagagtgagctccagctc 340 |||||| ||||||||||||||||| Sbjct: 168238 gctcccaagagtgagctccagctc 168215
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 gctcccgagagtgagctccagctc 340 |||||| ||||||||||||||||| Sbjct: 18350 gctcccaagagtgagctccagctc 18327
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tttctgacattaatttacat 24 |||||||||||||||||||| Sbjct: 90021 tttctgacattaatttacat 90040
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tttctgacattaatttacat 24 |||||||||||||||||||| Sbjct: 139532 tttctgacattaatttacat 139551
>dbj|AK175445.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-87-G11 Length = 431 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 365 aagaaagaagaagaagaaat 346
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 acaccaagaaagaagaagaa 247 |||||||||||||||||||| Sbjct: 49421 acaccaagaaagaagaagaa 49440
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 96944 aaagaagaagaagaaataag 96925
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 acaccaagaaagaagaagaa 247 |||||||||||||||||||| Sbjct: 136931 acaccaagaaagaagaagaa 136950
>emb|AL954150.15| Zebrafish DNA sequence from clone CH211-214B16 in linkage group 3, complete sequence Length = 209296 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcttggtctctctttcagaa 218 |||||||||||||||||||| Sbjct: 176182 gcttggtctctctttcagaa 176201
>dbj|AK101229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H19, full insert sequence Length = 1524 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 gctcccgagagtgagctccagctc 340 |||||| ||||||||||||||||| Sbjct: 1210 gctcccaagagtgagctccagctc 1187
>dbj|AK101035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150P14, full insert sequence Length = 2871 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 acaccaagaaagaagaagaa 247 |||||||||||||||||||| Sbjct: 308 acaccaagaaagaagaagaa 327
>emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, complete sequence Length = 40146 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 24626 aagaaagaagaagaagaaat 24645
>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete sequence Length = 298827 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 attatcatcacaacaagtga 176 |||||||||||||||||||| Sbjct: 53540 attatcatcacaacaagtga 53521
>gb|AC156636.2| Mus musculus BAC clone RP24-401F19 from chromosome 12, complete sequence Length = 170370 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 acaaataaataacacaattatcat 164 ||||||||||||||||||| |||| Sbjct: 114328 acaaataaataacacaattttcat 114351
>gb|AY785525.1| Arabidopsis thaliana At1g80390 gene, promoter region Length = 2500 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 2146 aagaaagaagaagaagaaat 2127
>gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179734 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 129040 aaagaagaagaagaaataag 129059
>gb|AC174765.1| Gasterosteus aculeatus clone VMRC28-42K03, complete sequence Length = 143816 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 caagaaagaagaagaagaaa 251 |||||||||||||||||||| Sbjct: 61579 caagaaagaagaagaagaaa 61560
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 784661 aagaaagaagaagaagaaat 784642
>emb|BX005356.7| Zebrafish DNA sequence from clone CH211-255I20 in linkage group 14, complete sequence Length = 171108 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 77741 aaagaagaagaagaaataag 77760
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccaagaaagaagaagaagaa 250 |||||||||||||||||||| Sbjct: 22644191 ccaagaaagaagaagaagaa 22644172
>gb|AC004051.1|AC004051 Homo sapiens chromosome 4 clone B208G5 map 4q25, complete sequence Length = 147665 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 60216 aaagaagaagaagaaataag 60197
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 tgcttccaaatgcaaactcgtcag 450 |||||||||||||||||| ||||| Sbjct: 25691 tgcttccaaatgcaaactggtcag 25668
>gb|AC139752.4| Mus musculus BAC clone RP24-258K1 from 12, complete sequence Length = 189312 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 60119 aaagaagaagaagaaataag 60100
>gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, complete sequence Length = 151011 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 23462 aaagaagaagaagaaataag 23481
>gb|AC145211.3| Mus musculus BAC clone RP23-419G4 from 8, complete sequence Length = 191166 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aaagaagaagaagaaataag 255 |||||||||||||||||||| Sbjct: 72267 aaagaagaagaagaaataag 72286
>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete sequence Length = 217148 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagaaagaagaagaagaaat 252 |||||||||||||||||||| Sbjct: 210327 aagaaagaagaagaagaaat 210346
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 109560 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agaaagaagaagaagaaata 253 |||||||||||||||||||| Sbjct: 74151 agaaagaagaagaagaaata 74132
>dbj|AP006647.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT29F18, TM0312, complete sequence Length = 119276 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 agaaagaagaagaagaaata 253 |||||||||||||||||||| Sbjct: 24937 agaaagaagaagaagaaata 24956
>dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT40O04, TM0348, complete sequence Length = 105070 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agaaagaagaagaagaaata 253 |||||||||||||||||||| Sbjct: 1529 agaaagaagaagaagaaata 1510
>gb|U66242.1|ZRU66242 Zoogloea ramigera PHB polymerase (phbC) gene, complete cds Length = 2587 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 652 gccatgctgggtcaggaacc 671 |||||||||||||||||||| Sbjct: 2377 gccatgctgggtcaggaacc 2358
>emb|AL663101.8| Mouse DNA sequence from clone RP23-205M7 on chromosome X, complete sequence Length = 216297 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 tctctctttcagaaactaat 224 |||||||||||||||||||| Sbjct: 147944 tctctctttcagaaactaat 147963
>emb|AL592403.6| Mouse DNA sequence from clone RP23-90A8 on chromosome 1, complete sequence Length = 165527 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 caaataaataacacaattat 161 |||||||||||||||||||| Sbjct: 10219 caaataaataacacaattat 10200
>dbj|AB074883.1| Aspergillus nidulans gene for VpsA, complete cds Length = 3540 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 accaagaaagaagaagaaga 249 |||||||||||||||||||| Sbjct: 294 accaagaaagaagaagaaga 275 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,922,940 Number of Sequences: 3902068 Number of extensions: 6922940 Number of successful extensions: 728807 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 725942 Number of HSP's gapped (non-prelim): 2864 length of query: 676 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 653 effective length of database: 17,143,297,704 effective search space: 11194573400712 effective search space used: 11194573400712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
