ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags34i05 |
|---|---|
| Clone Library Name | barley_pub |
>ACLY_HUMAN (P53396) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1101 Score = 171 bits (434), Expect = 2e-42 Identities = 81/158 (51%), Positives = 107/158 (67%) Frame = -3 Query: 698 GGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAH 519 GGA+D AA+ F A+D G+ P EFV MKK+G + GIGHR+KS +N D RVQ+L+ Y Sbjct: 936 GGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVR 995 Query: 518 THFPSVKYMEYAVQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIG 339 HFP+ ++YA++VE T SK NL++NVDG I +++E DE ++IG Sbjct: 996 QHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIG 1055 Query: 338 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 225 LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+ Y Sbjct: 1056 ALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1093
>ACL1_SCHPO (Q9P7W3) Probable ATP-citrate synthase subunit 1 (EC 2.3.3.8)| (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) Length = 615 Score = 171 bits (432), Expect = 3e-42 Identities = 82/158 (51%), Positives = 107/158 (67%) Frame = -3 Query: 698 GGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAH 519 GGA+D AA+ F AYD GL+P FV+ +K +PGIGHRIKSR+N D RV+L++ Y Sbjct: 456 GGALDGAAQEFSKAYDAGLSPRAFVDSCRKANKLIPGIGHRIKSRNNPDLRVELVKGYVK 515 Query: 518 THFPSVKYMEYAVQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIG 339 +FPS K ++YA+ VE T SK +NL++NVDG I + +E +E + +G Sbjct: 516 KNFPSTKLLDYALAVENVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFTLEEANEYINLG 575 Query: 338 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 225 LNG+FVL RSIGLIGH DQKRL+ PLYRHPW+D LY Sbjct: 576 ILNGMFVLGRSIGLIGHHLDQKRLRAPLYRHPWDDFLY 613
>ACLY_MOUSE (Q91V92) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1091 Score = 169 bits (429), Expect = 6e-42 Identities = 81/158 (51%), Positives = 107/158 (67%) Frame = -3 Query: 698 GGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAH 519 GGA+D AA+ F A+D G+ P EFV MKK+G + GIGHR+KS +N D RVQ+L+ + Sbjct: 926 GGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVK 985 Query: 518 THFPSVKYMEYAVQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIG 339 HFP+ ++YA++VE T SK NL++NVDG I +++E DE V+IG Sbjct: 986 QHFPATPLLDYALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIG 1045 Query: 338 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 225 LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+ Y Sbjct: 1046 ALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1083
>ACLY_RAT (P16638) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1100 Score = 169 bits (428), Expect = 7e-42 Identities = 81/158 (51%), Positives = 107/158 (67%) Frame = -3 Query: 698 GGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAH 519 GGA+D AA+ F A+D G+ P EFV MKK+G + GIGHR+KS +N D RVQ+L+ + Sbjct: 935 GGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVK 994 Query: 518 THFPSVKYMEYAVQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIG 339 HFP+ ++YA++VE T SK NL++NVDG I +++E DE V+IG Sbjct: 995 QHFPATPLLDYALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIG 1054 Query: 338 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 225 LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+ Y Sbjct: 1055 ALNGVFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1092
>ACL1_SORMA (O93988) ATP-citrate synthase subunit 1 (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) Length = 674 Score = 169 bits (427), Expect = 1e-41 Identities = 81/158 (51%), Positives = 109/158 (68%) Frame = -3 Query: 698 GGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAH 519 GGA+D AA F A+D+GL+P EFV+ M+K+ +PGIGHR+KSR+N D RV+L+++Y Sbjct: 496 GGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIPGIGHRVKSRNNPDLRVELVKEYVK 555 Query: 518 THFPSVKYMEYAVQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIG 339 FPS K ++YA+ VET T SK +NL++NVDG I S +E ++ + +G Sbjct: 556 AKFPSSKLLDYALAVETVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFSTEEAEDYLSMG 615 Query: 338 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 225 LNGLFVL RSIGLI H DQKRL+ LYRHPW+D+ Y Sbjct: 616 VLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDITY 653
>ACL1_NEUCR (Q8X097) Probable ATP-citrate synthase subunit 1 (EC 2.3.3.8)| (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) Length = 670 Score = 168 bits (425), Expect = 2e-41 Identities = 80/158 (50%), Positives = 109/158 (68%) Frame = -3 Query: 698 GGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAH 519 GGA+D AA F A+D+GL+P EFV+ M+K+ +PGIGHR+KSR+N D RV+L+++Y Sbjct: 492 GGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIPGIGHRVKSRNNPDLRVELVKEYVK 551 Query: 518 THFPSVKYMEYAVQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIG 339 FPS K ++YA+ VE+ T SK +NL++NVDG I S +E ++ + +G Sbjct: 552 AKFPSTKLLDYALAVESVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFSTEEAEDYLSMG 611 Query: 338 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 225 LNGLFVL RSIGLI H DQKRL+ LYRHPW+D+ Y Sbjct: 612 VLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDITY 649
>ACLY_CAEEL (P53585) Probable ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1106 Score = 160 bits (406), Expect = 3e-39 Identities = 81/161 (50%), Positives = 106/161 (65%), Gaps = 3/161 (1%) Frame = -3 Query: 698 GGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYA- 522 GGA+D AAR F +A+D+G + +FV M+KKG + GIGHR+KS +N DKRV++L+++A Sbjct: 936 GGALDGAARQFSEAFDQGWSANQFVSEMRKKGKHIMGIGHRVKSINNPDKRVEILKRFAM 995 Query: 521 --HTHFPSVKYMEYAVQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIV 348 EYA++VE T +K NL++NVDGAI +KQE +E + Sbjct: 996 DKKEFAQETPLFEYALEVEKITTAKKPNLILNVDGAIAILFVDILRHSGMFTKQEAEETI 1055 Query: 347 EIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 225 EIG LNGLFVL RSIG IGH DQ RLKQ LYRHPW+D+ Y Sbjct: 1056 EIGSLNGLFVLGRSIGFIGHYLDQSRLKQGLYRHPWDDISY 1096
>CYSZ_CUCMA (P49299) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS)| Length = 516 Score = 35.4 bits (80), Expect = 0.17 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Frame = -3 Query: 632 EFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSV---KYMEYAVQVETYT 462 EF+EG+K + ++ G GHR+ N D R ++++K A F V +E AV +E Sbjct: 351 EFIEGVKNRKRKMSGFGHRVYK--NYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAA 408 Query: 461 LS 456 LS Sbjct: 409 LS 410
>CISY2_ARATH (Q9LXS6) Citrate synthase 2, peroxisomal precursor (EC 2.3.3.1)| Length = 514 Score = 33.9 bits (76), Expect = 0.49 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Frame = -3 Query: 632 EFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSV---KYMEYAVQVETYT 462 +F+EG+K + ++ G GHR+ N D R ++++K A F V +E AV +E Sbjct: 346 DFIEGVKNRKRKMSGFGHRVYK--NYDPRAKVIKKLADEVFSIVGRDPLIEVAVALEKAA 403 Query: 461 LS 456 LS Sbjct: 404 LS 405
>CISY3_ARATH (Q9SJH7) Citrate synthase 3, peroxisomal precursor (EC 2.3.3.1)| Length = 509 Score = 33.1 bits (74), Expect = 0.83 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Frame = -3 Query: 632 EFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSV---KYMEYAVQVETYT 462 EF+EG+K + ++ G GHR+ N D R ++++ A F V +E AV +E Sbjct: 341 EFIEGVKNRKRKMSGFGHRVYK--NYDPRAKVIKNLADEVFSIVGKDPLIEVAVALEKAA 398 Query: 461 LS 456 LS Sbjct: 399 LS 400
>TR10A_HUMAN (O00220) Tumor necrosis factor receptor superfamily member 10A| precursor (Death receptor 4) (TNF-related apoptosis-inducing ligand receptor 1) (TRAIL receptor 1) (TRAIL-R1) (CD261 antigen) Length = 468 Score = 31.6 bits (70), Expect = 2.4 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +2 Query: 446 CWPLTGCRSQPEQHTPCT*LKGSVCE 523 C P T C+S E+ +PCT + + C+ Sbjct: 164 CLPCTACKSDEEERSPCTTTRNTACQ 189
>CISY_CORGL (P42457) Citrate synthase (EC 2.3.3.1)| Length = 437 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (11%) Frame = -3 Query: 632 EFVEGMKKK--GIRVPGIGHRIKSRDNRDKRVQLLQKYAH---THFPSVKYMEYAVQVET 468 EF+ +K K G+R+ G GHR+ N D R ++++ AH H ++ A+++E Sbjct: 297 EFMNKVKNKEDGVRLMGFGHRVYK--NYDPRAAIVKETAHEILEHLGGDDLLDLAIKLEE 354 Query: 467 YTLSK----ANNLVMNVD 426 L+ + L NVD Sbjct: 355 IALADDYFISRKLYPNVD 372
>CISY1_ARATH (Q9LXS7) Citrate synthase 1, peroxisomal precursor (EC 2.3.3.1)| Length = 480 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = -3 Query: 632 EFVEGMKKKGIRVPGIGHRI-KSRDNRDKRVQLL 534 EF+E +K K R+ G GHRI K+ D R K V+ L Sbjct: 343 EFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKL 376
>CISY2_MYCTU (P63777) Putative citrate synthase 2 (EC 2.3.3.1)| Length = 373 Score = 30.8 bits (68), Expect = 4.1 Identities = 33/132 (25%), Positives = 53/132 (40%) Frame = -3 Query: 662 DAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSVKYMEYA 483 D +R V+G+ +G ++ G GHR+ + D R ++L+ A + +Y E A Sbjct: 223 DEVERAGDARSVVKGILDRGEKLMGFGHRVYRAE--DPRARVLRAAAE-RLGAPRY-EVA 278 Query: 482 VQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIGYLNGLFVLARSI 303 V VE LS+ D AI ++ V + +F R+ Sbjct: 279 VAVEQAALSELRE--RRPDRAIETNVEFWAAVVLDFAR------VPANMMPAMFTCGRTA 330 Query: 302 GLIGHTFDQKRL 267 G H +QKRL Sbjct: 331 GWCAHILEQKRL 342
>CISY2_MYCBO (P63778) Putative citrate synthase 2 (EC 2.3.3.1)| Length = 373 Score = 30.8 bits (68), Expect = 4.1 Identities = 33/132 (25%), Positives = 53/132 (40%) Frame = -3 Query: 662 DAYDRGLTPYEFVEGMKKKGIRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSVKYMEYA 483 D +R V+G+ +G ++ G GHR+ + D R ++L+ A + +Y E A Sbjct: 223 DEVERAGDARSVVKGILDRGEKLMGFGHRVYRAE--DPRARVLRAAAE-RLGAPRY-EVA 278 Query: 482 VQVETYTLSKANNLVMNVDGAIXXXXXXXXXXXXXXSKQEIDEIVEIGYLNGLFVLARSI 303 V VE LS+ D AI ++ V + +F R+ Sbjct: 279 VAVEQAALSELRE--RRPDRAIETNVEFWAAVVLDFAR------VPANMMPAMFTCGRTA 330 Query: 302 GLIGHTFDQKRL 267 G H +QKRL Sbjct: 331 GWCAHILEQKRL 342
>TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily member 10C| precursor (Decoy receptor 1) (DcR1) (Decoy TRAIL receptor without death domain) (TNF-related apoptosis-inducing ligand receptor 3) (TRAIL receptor 3) (TRAIL-R3) (Trail receptor wi Length = 259 Score = 30.0 bits (66), Expect = 7.1 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +2 Query: 440 PNCWPLTGCRSQPEQHTPCT*LKGSVCE 523 P+C+P T C+S + + CT + +VC+ Sbjct: 83 PSCFPCTVCKSDQKHKSSCTMTRDTVCQ 110
>CISY_BRAJA (P94325) Citrate synthase (EC 2.3.3.1)| Length = 434 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Frame = -3 Query: 632 EFVEGMKKKG--IRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSVKY-----MEYAVQV 474 EF+ +K K +R+ G GHR+ N D R +++QK H + ++ A+++ Sbjct: 291 EFIAKVKDKNSEVRLMGFGHRVYK--NYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMEL 348 Query: 473 ETYTLS 456 E LS Sbjct: 349 EKIALS 354
>MYG_VARVA (P02203) Myoglobin| Length = 153 Score = 29.6 bits (65), Expect = 9.2 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -3 Query: 623 EGMKKKGIRV-PGIGHRIKSRDNRDKRVQ-LLQKYAHTHFPSVKYMEYAVQVETYTLSKA 450 E +KK G V +G +K + + + + L Q +A+TH +KY+E+ +V +++ Sbjct: 59 EDLKKHGTTVLTALGRILKQKGHHEAEIAPLAQTHANTHKIPIKYLEFICEVIVGVIAEK 118 Query: 449 NNLVMNVD 426 ++ D Sbjct: 119 HSADFGAD 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,567,367 Number of Sequences: 219361 Number of extensions: 2148951 Number of successful extensions: 5260 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5256 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
