ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 216 7e-53
2gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 216 7e-53
3dbj|AK070924.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 7e-53
4dbj|AK068567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 7e-53
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 216 7e-53
6ref|NM_196489.1| Oryza sativa (japonica cultivar-group) unknown ... 204 3e-49
7ref|XM_470273.1| Oryza sativa (japonica cultivar-group), predic... 44 0.60
8gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 44 0.60
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.60
10gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
11gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
13dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 44 0.60
14dbj|AK072441.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
15dbj|AK067219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
16gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
17ref|XM_534321.2| PREDICTED: Canis familiaris similar to optic at... 42 2.4
18gb|AC132268.3| Mus musculus BAC clone RP24-399H6 from chromosome... 42 2.4
19gb|AC140723.16| Mus musculus chromosome 16, clone RP23-346N4, co... 42 2.4
20ref|XM_643502.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal p... 42 2.4
21ref|XM_647307.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal p... 42 2.4
22ref|XM_648356.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal p... 42 2.4
23ref|XM_648370.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal p... 42 2.4
24ref|XM_733585.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 2.4
25ref|XM_730769.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 2.4
26emb|BX510321.9| Zebrafish DNA sequence from clone CH211-255P13 i... 42 2.4
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
28gb|AC122441.6| Mus musculus BAC clone RP24-225A21 from chromosom... 42 2.4
29gb|AC165960.4| Mus musculus BAC clone RP23-395M20 from chromosom... 40 9.4
30gb|BT017698.1| Zea mays clone EL01N0445D11.c mRNA sequence 40 9.4
31gb|AC003954.1| Homo sapiens chromosome 5, Pac clone 162o17 (LBNL... 40 9.4
32gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosom... 40 9.4
33gb|AC145955.3| Gallus gallus chromosome UNK clone CH261-13M13, c... 40 9.4
34gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete se... 40 9.4
35gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete s... 40 9.4
36gb|AC109479.3| Homo sapiens chromosome 5 clone RP11-443C10, comp... 40 9.4
37emb|CR361543.9| Zebrafish DNA sequence from clone CH211-25E11 in... 40 9.4
38gb|AC116447.10| Homo sapiens chromosome 18, clone RP11-54G14, co... 40 9.4
39emb|AL714020.5| Mouse DNA sequence from clone RP23-321G2 on chro... 40 9.4
40dbj|AK027384.1| Homo sapiens cDNA FLJ14478 fis, clone MAMMA10016... 40 9.4
41gb|AC008544.7| Homo sapiens chromosome 5 clone CTC-500G13, compl... 40 9.4
42gb|AC018692.9| Homo sapiens BAC clone RP11-555K2 from 4, complet... 40 9.4
43gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, comple... 40 9.4
44emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, co... 40 9.4
45gb|AC021015.4| Homo sapiens BAC clone RP11-320C1 from 2, complet... 40 9.4
46gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H... 40 9.4
47gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome ... 40 9.4
48emb|BX119956.8| Mouse DNA sequence from clone RP23-301K15 on chr... 40 9.4
49gb|U15656.1|SAU15656 Schistocerca americana lipocalin Lazarillo ... 40 9.4
50gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromoso... 40 9.4
51emb|Z38071.1|SALIPLAZ S.americana mRNA for lipocalin Lazarillo 40 9.4 
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  216 bits (109), Expect = 7e-53
 Identities = 357/439 (81%), Gaps = 3/439 (0%)
 Strand = Plus / Plus

                                                                            
Query: 250      caacatagctaatctcagctaaaatctttcagtcttctcttcaacacatccaatgacttc 309
                |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 13986955 caacatggctaagctcagctaaaatccttcagccttctcttcaacacatccaaggacttc 13987014

                                                                            
Query: 310      tttcgggcactctgcaccacgtttctacttgaaaggctcccaaacaagctgctgtcagga 369
                ||||| ||||| |||||     |||  | ||||||||||||||| |||||    || |||
Sbjct: 13987015 tttcgagcactttgcactgtacttcggcctgaaaggctcccaaataagctt---tccgga 13987071

                                                                            
Query: 370      gcatcccgaaatttgtcacagatgatggccaccttcttgtggtccaaggacgcataactc 429
                ||||| | ||| |||||||||||||| | ||||||||| || ||||||||  || || ||
Sbjct: 13987072 gcatctctaaacttgtcacagatgatagacaccttcttatgatccaaggatccaaaattc 13987131

                                                                            
Query: 430      ttctccctgattacagcattcatgaagctctcggcgtggttgctcagcaatagattagtc 489
                ||||||||||||||||  ||||||||| |||| |  |||||||| ||||  ||||  || 
Sbjct: 13987132 ttctccctgattacagggttcatgaagttctctggctggttgctgagcagaagatcggtg 13987191

                                                                            
Query: 490      agctgcctaatctcaaccaggcaatctttgaaacttgtttcctttttaaggaccgacaac 549
                ||||||||||| || |||||||||||| ||||| ||||||| ||| | ||  | ||||||
Sbjct: 13987192 agctgcctaatttcgaccaggcaatctctgaaagttgtttcttttctcagctctgacaac 13987251

                                                                            
Query: 550      ccagtggtgtgaaatctgtcttcagcaaactcttccaacattttcaggtcaatgtcgata 609
                |||||| |||| ||| | || || ||||| || || ||| |||||||||||||||| |||
Sbjct: 13987252 ccagtgctgtggaatttatcatctgcaaattcctctaactttttcaggtcaatgtcaata 13987311

                                                                            
Query: 610      ccaacaaccgcattgacactcaaccttttcaccctgtcgctgagaagaactgttattatg 669
                ||  |  | |||||  || | |||||||||||||  || || |||| |||||| ||||| 
Sbjct: 13987312 cctgcggcagcattagcattgaaccttttcacccgatcactaagaaaaactgtcattatc 13987371

                                   
Query: 670      gagtctgagatgtggctga 688
                ||||| |||||||||||||
Sbjct: 13987372 gagtccgagatgtggctga 13987390
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  216 bits (109), Expect = 7e-53
 Identities = 357/439 (81%), Gaps = 3/439 (0%)
 Strand = Plus / Plus

                                                                        
Query: 250  caacatagctaatctcagctaaaatctttcagtcttctcttcaacacatccaatgacttc 309
            |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 3084 caacatggctaagctcagctaaaatccttcagccttctcttcaacacatccaaggacttc 3143

                                                                        
Query: 310  tttcgggcactctgcaccacgtttctacttgaaaggctcccaaacaagctgctgtcagga 369
            ||||| ||||| |||||     |||  | ||||||||||||||| |||||    || |||
Sbjct: 3144 tttcgagcactttgcactgtacttcggcctgaaaggctcccaaataagctt---tccgga 3200

                                                                        
Query: 370  gcatcccgaaatttgtcacagatgatggccaccttcttgtggtccaaggacgcataactc 429
            ||||| | ||| |||||||||||||| | ||||||||| || ||||||||  || || ||
Sbjct: 3201 gcatctctaaacttgtcacagatgatagacaccttcttatgatccaaggatccaaaattc 3260

                                                                        
Query: 430  ttctccctgattacagcattcatgaagctctcggcgtggttgctcagcaatagattagtc 489
            ||||||||||||||||  ||||||||| |||| |  |||||||| ||||  ||||  || 
Sbjct: 3261 ttctccctgattacagggttcatgaagttctctggctggttgctgagcagaagatcggtg 3320

                                                                        
Query: 490  agctgcctaatctcaaccaggcaatctttgaaacttgtttcctttttaaggaccgacaac 549
            ||||||||||| || |||||||||||| ||||| ||||||| ||| | ||  | ||||||
Sbjct: 3321 agctgcctaatttcgaccaggcaatctctgaaagttgtttcttttctcagctctgacaac 3380

                                                                        
Query: 550  ccagtggtgtgaaatctgtcttcagcaaactcttccaacattttcaggtcaatgtcgata 609
            |||||| |||| ||| | || || ||||| || || ||| |||||||||||||||| |||
Sbjct: 3381 ccagtgctgtggaatttatcatctgcaaattcctctaactttttcaggtcaatgtcaata 3440

                                                                        
Query: 610  ccaacaaccgcattgacactcaaccttttcaccctgtcgctgagaagaactgttattatg 669
            ||  |  | |||||  || | |||||||||||||  || || |||| |||||| ||||| 
Sbjct: 3441 cctgcggcagcattagcattgaaccttttcacccgatcactaagaaaaactgtcattatc 3500

                               
Query: 670  gagtctgagatgtggctga 688
            ||||| |||||||||||||
Sbjct: 3501 gagtccgagatgtggctga 3519
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>dbj|AK070924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F24, full
            insert sequence
          Length = 2877

 Score =  216 bits (109), Expect = 7e-53
 Identities = 357/439 (81%), Gaps = 3/439 (0%)
 Strand = Plus / Minus

                                                                        
Query: 250  caacatagctaatctcagctaaaatctttcagtcttctcttcaacacatccaatgacttc 309
            |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 2692 caacatggctaagctcagctaaaatccttcagccttctcttcaacacatccaaggacttc 2633

                                                                        
Query: 310  tttcgggcactctgcaccacgtttctacttgaaaggctcccaaacaagctgctgtcagga 369
            ||||| ||||| |||||     |||  | ||||||||||||||| |||||    || |||
Sbjct: 2632 tttcgagcactttgcactgtacttcggcctgaaaggctcccaaataagctt---tccgga 2576

                                                                        
Query: 370  gcatcccgaaatttgtcacagatgatggccaccttcttgtggtccaaggacgcataactc 429
            ||||| | ||| |||||||||||||| | ||||||||| || ||||||||  || || ||
Sbjct: 2575 gcatctctaaacttgtcacagatgatagacaccttcttatgatccaaggatccaaaattc 2516

                                                                        
Query: 430  ttctccctgattacagcattcatgaagctctcggcgtggttgctcagcaatagattagtc 489
            ||||||||||||||||  ||||||||| |||| |  |||||||| ||||  ||||  || 
Sbjct: 2515 ttctccctgattacagggttcatgaagttctctggctggttgctgagcagaagatcggtg 2456

                                                                        
Query: 490  agctgcctaatctcaaccaggcaatctttgaaacttgtttcctttttaaggaccgacaac 549
            ||||||||||| || |||||||||||| ||||| ||||||| ||| | ||  | ||||||
Sbjct: 2455 agctgcctaatttcgaccaggcaatctctgaaagttgtttcttttctcagctctgacaac 2396

                                                                        
Query: 550  ccagtggtgtgaaatctgtcttcagcaaactcttccaacattttcaggtcaatgtcgata 609
            |||||| |||| ||| | || || ||||| || || ||| |||||||||||||||| |||
Sbjct: 2395 ccagtgctgtggaatttatcatctgcaaattcctctaactttttcaggtcaatgtcaata 2336

                                                                        
Query: 610  ccaacaaccgcattgacactcaaccttttcaccctgtcgctgagaagaactgttattatg 669
            ||  |  | |||||  || | |||||||||||||  || || |||| |||||| ||||| 
Sbjct: 2335 cctgcggcagcattagcattgaaccttttcacccgatcactaagaaaaactgtcattatc 2276

                               
Query: 670  gagtctgagatgtggctga 688
            ||||| |||||||||||||
Sbjct: 2275 gagtccgagatgtggctga 2257
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>dbj|AK068567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152A07, full
            insert sequence
          Length = 2972

 Score =  216 bits (109), Expect = 7e-53
 Identities = 357/439 (81%), Gaps = 3/439 (0%)
 Strand = Plus / Minus

                                                                        
Query: 250  caacatagctaatctcagctaaaatctttcagtcttctcttcaacacatccaatgacttc 309
            |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 2660 caacatggctaagctcagctaaaatccttcagccttctcttcaacacatccaaggacttc 2601

                                                                        
Query: 310  tttcgggcactctgcaccacgtttctacttgaaaggctcccaaacaagctgctgtcagga 369
            ||||| ||||| |||||     |||  | ||||||||||||||| |||||    || |||
Sbjct: 2600 tttcgagcactttgcactgtacttcggcctgaaaggctcccaaataagctt---tccgga 2544

                                                                        
Query: 370  gcatcccgaaatttgtcacagatgatggccaccttcttgtggtccaaggacgcataactc 429
            ||||| | ||| |||||||||||||| | ||||||||| || ||||||||  || || ||
Sbjct: 2543 gcatctctaaacttgtcacagatgatagacaccttcttatgatccaaggatccaaaattc 2484

                                                                        
Query: 430  ttctccctgattacagcattcatgaagctctcggcgtggttgctcagcaatagattagtc 489
            ||||||||||||||||  ||||||||| |||| |  |||||||| ||||  ||||  || 
Sbjct: 2483 ttctccctgattacagggttcatgaagttctctggctggttgctgagcagaagatcggtg 2424

                                                                        
Query: 490  agctgcctaatctcaaccaggcaatctttgaaacttgtttcctttttaaggaccgacaac 549
            ||||||||||| || |||||||||||| ||||| ||||||| ||| | ||  | ||||||
Sbjct: 2423 agctgcctaatttcgaccaggcaatctctgaaagttgtttcttttctcagctctgacaac 2364

                                                                        
Query: 550  ccagtggtgtgaaatctgtcttcagcaaactcttccaacattttcaggtcaatgtcgata 609
            |||||| |||| ||| | || || ||||| || || ||| |||||||||||||||| |||
Sbjct: 2363 ccagtgctgtggaatttatcatctgcaaattcctctaactttttcaggtcaatgtcaata 2304

                                                                        
Query: 610  ccaacaaccgcattgacactcaaccttttcaccctgtcgctgagaagaactgttattatg 669
            ||  |  | |||||  || | |||||||||||||  || || |||| |||||| ||||| 
Sbjct: 2303 cctgcggcagcattagcattgaaccttttcacccgatcactaagaaaaactgtcattatc 2244

                               
Query: 670  gagtctgagatgtggctga 688
            ||||| |||||||||||||
Sbjct: 2243 gagtccgagatgtggctga 2225
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  216 bits (109), Expect = 7e-53
 Identities = 357/439 (81%), Gaps = 3/439 (0%)
 Strand = Plus / Plus

                                                                            
Query: 250      caacatagctaatctcagctaaaatctttcagtcttctcttcaacacatccaatgacttc 309
                |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 13995197 caacatggctaagctcagctaaaatccttcagccttctcttcaacacatccaaggacttc 13995256

                                                                            
Query: 310      tttcgggcactctgcaccacgtttctacttgaaaggctcccaaacaagctgctgtcagga 369
                ||||| ||||| |||||     |||  | ||||||||||||||| |||||    || |||
Sbjct: 13995257 tttcgagcactttgcactgtacttcggcctgaaaggctcccaaataagctt---tccgga 13995313

                                                                            
Query: 370      gcatcccgaaatttgtcacagatgatggccaccttcttgtggtccaaggacgcataactc 429
                ||||| | ||| |||||||||||||| | ||||||||| || ||||||||  || || ||
Sbjct: 13995314 gcatctctaaacttgtcacagatgatagacaccttcttatgatccaaggatccaaaattc 13995373

                                                                            
Query: 430      ttctccctgattacagcattcatgaagctctcggcgtggttgctcagcaatagattagtc 489
                ||||||||||||||||  ||||||||| |||| |  |||||||| ||||  ||||  || 
Sbjct: 13995374 ttctccctgattacagggttcatgaagttctctggctggttgctgagcagaagatcggtg 13995433

                                                                            
Query: 490      agctgcctaatctcaaccaggcaatctttgaaacttgtttcctttttaaggaccgacaac 549
                ||||||||||| || |||||||||||| ||||| ||||||| ||| | ||  | ||||||
Sbjct: 13995434 agctgcctaatttcgaccaggcaatctctgaaagttgtttcttttctcagctctgacaac 13995493

                                                                            
Query: 550      ccagtggtgtgaaatctgtcttcagcaaactcttccaacattttcaggtcaatgtcgata 609
                |||||| |||| ||| | || || ||||| || || ||| |||||||||||||||| |||
Sbjct: 13995494 ccagtgctgtggaatttatcatctgcaaattcctctaactttttcaggtcaatgtcaata 13995553

                                                                            
Query: 610      ccaacaaccgcattgacactcaaccttttcaccctgtcgctgagaagaactgttattatg 669
                ||  |  | |||||  || | |||||||||||||  || || |||| |||||| ||||| 
Sbjct: 13995554 cctgcggcagcattagcattgaaccttttcacccgatcactaagaaaaactgtcattatc 13995613

                                   
Query: 670      gagtctgagatgtggctga 688
                ||||| |||||||||||||
Sbjct: 13995614 gagtccgagatgtggctga 13995632
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>ref|NM_196489.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0032I20.2), mRNA
          Length = 2370

 Score =  204 bits (103), Expect = 3e-49
 Identities = 345/425 (81%), Gaps = 3/425 (0%)
 Strand = Plus / Minus

                                                                        
Query: 264  tcagctaaaatctttcagtcttctcttcaacacatccaatgacttctttcgggcactctg 323
            |||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 2370 tcagctaaaatccttcagccttctcttcaacacatccaaggacttctttcgagcactttg 2311

                                                                        
Query: 324  caccacgtttctacttgaaaggctcccaaacaagctgctgtcaggagcatcccgaaattt 383
            |||     |||  | ||||||||||||||| |||||    || |||||||| | ||| ||
Sbjct: 2310 cactgtacttcggcctgaaaggctcccaaataagctt---tccggagcatctctaaactt 2254

                                                                        
Query: 384  gtcacagatgatggccaccttcttgtggtccaaggacgcataactcttctccctgattac 443
            |||||||||||| | ||||||||| || ||||||||  || || ||||||||||||||||
Sbjct: 2253 gtcacagatgatagacaccttcttatgatccaaggatccaaaattcttctccctgattac 2194

                                                                        
Query: 444  agcattcatgaagctctcggcgtggttgctcagcaatagattagtcagctgcctaatctc 503
            ||  ||||||||| |||| |  |||||||| ||||  ||||  || ||||||||||| ||
Sbjct: 2193 agggttcatgaagttctctggctggttgctgagcagaagatcggtgagctgcctaatttc 2134

                                                                        
Query: 504  aaccaggcaatctttgaaacttgtttcctttttaaggaccgacaacccagtggtgtgaaa 563
             |||||||||||| ||||| ||||||| ||| | ||  | |||||||||||| |||| ||
Sbjct: 2133 gaccaggcaatctctgaaagttgtttcttttctcagctctgacaacccagtgctgtggaa 2074

                                                                        
Query: 564  tctgtcttcagcaaactcttccaacattttcaggtcaatgtcgataccaacaaccgcatt 623
            | | || || ||||| || || ||| |||||||||||||||| |||||  |  | |||||
Sbjct: 2073 tttatcatctgcaaattcctctaactttttcaggtcaatgtcaatacctgcggcagcatt 2014

                                                                        
Query: 624  gacactcaaccttttcaccctgtcgctgagaagaactgttattatggagtctgagatgtg 683
              || | |||||||||||||  || || |||| |||||| ||||| ||||| ||||||||
Sbjct: 2013 agcattgaaccttttcacccgatcactaagaaaaactgtcattatcgagtccgagatgtg 1954

                 
Query: 684  gctga 688
            |||||
Sbjct: 1953 gctga 1949
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>ref|XM_470273.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2367

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 264  tcagctaaaatctttcagtcttctcttcaacacatcca 301
            |||||||||||| ||||| ||||||||||  |||||||
Sbjct: 2367 tcagctaaaatccttcagccttctcttcagaacatcca 2330
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 383    tgtcacagatgatggccaccttcttg 408
              |||||| |||||||||||||||||||
Sbjct: 522966 tgtcaccgatgatggccaccttcttg 522991
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 264     tcagctaaaatctttcagtcttctcttcaacacatcca 301
               |||||||||||| ||||| ||||||||||  |||||||
Sbjct: 3420877 tcagctaaaatccttcagccttctcttcagaacatcca 3420840
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>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12,
            complete sequence
          Length = 177327

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 264  tcagctaaaatctttcagtcttctcttcaacacatcca 301
            |||||||||||| ||||| ||||||||||  |||||||
Sbjct: 8337 tcagctaaaatccttcagccttctcttcagaacatcca 8374
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>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
             complete sequence
          Length = 103330

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 264   tcagctaaaatctttcagtcttctcttcaacacatcca 301
             |||||||||||| ||||| ||||||||||  |||||||
Sbjct: 89498 tcagctaaaatccttcagccttctcttcagaacatcca 89535
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 264     tcagctaaaatctttcagtcttctcttcaacacatcca 301
               |||||||||||| ||||| ||||||||||  |||||||
Sbjct: 3420988 tcagctaaaatccttcagccttctcttcagaacatcca 3420951
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 595    aggtcaatgtcgataccaacaaccgc 620
              ||||||||||||||||| ||||||||
Sbjct: 802085 aggtcaatgtcgataccgacaaccgc 802060
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>dbj|AK072441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111E14, full
            insert sequence
          Length = 2682

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 264  tcagctaaaatctttcagtcttctcttcaacacatcca 301
            |||||||||||| ||||| ||||||||||  |||||||
Sbjct: 2547 tcagctaaaatccttcagccttctcttcagaacatcca 2510
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>dbj|AK067219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098I02, full
            insert sequence
          Length = 4307

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 264  tcagctaaaatctttcagtcttctcttcaacacatcca 301
            |||||||||||| ||||| ||||||||||  |||||||
Sbjct: 4179 tcagctaaaatccttcagccttctcttcagaacatcca 4142
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>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0022L07,
              complete sequence
          Length = 142134

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 261    atctcagctaaaatctttcagtctt 285
              ||||||| |||||||||||||||||
Sbjct: 110645 atctcagataaaatctttcagtctt 110669
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>ref|XM_534321.2| PREDICTED: Canis familiaris similar to optic atrophy 1 isoform 8
            (LOC477129), mRNA
          Length = 3657

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 565  ctgtcttcagcaaactcttccaaca 589
            |||||||||||||| ||||||||||
Sbjct: 3407 ctgtcttcagcaaaatcttccaaca 3383
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>gb|AC132268.3| Mus musculus BAC clone RP24-399H6 from chromosome 19, complete sequence
          Length = 191573

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   tagacaggaaaatcataacag 161
             |||||||||||||||||||||
Sbjct: 54825 tagacaggaaaatcataacag 54845
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>gb|AC140723.16| Mus musculus chromosome 16, clone RP23-346N4, complete sequence
          Length = 204252

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 227   ctaaaatctttcgtccttctcttca 251
             |||||||||||| ||||||||||||
Sbjct: 79722 ctaaaatctttcttccttctcttca 79746
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>ref|XM_643502.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal protein S3a, putative
           (425.t00009) partial mRNA
          Length = 771

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  aaatttggagcatacaactac 61
           |||||||||||||||||||||
Sbjct: 238 aaatttggagcatacaactac 258
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>ref|XM_647307.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal protein S3a, putative
           (119.t00009) partial mRNA
          Length = 771

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  aaatttggagcatacaactac 61
           |||||||||||||||||||||
Sbjct: 238 aaatttggagcatacaactac 258
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>ref|XM_648356.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal protein S3a, putative
           (82.t00026) partial mRNA
          Length = 771

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  aaatttggagcatacaactac 61
           |||||||||||||||||||||
Sbjct: 238 aaatttggagcatacaactac 258
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>ref|XM_648370.1| Entamoeba histolytica HM-1:IMSS 40S ribosomal protein S3a, putative
           (82.t00019) partial mRNA
          Length = 774

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  aaatttggagcatacaactac 61
           |||||||||||||||||||||
Sbjct: 238 aaatttggagcatacaactac 258
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>ref|XM_733585.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000027.03.0)
           partial mRNA
          Length = 825

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 ttttacagtagcaaatttaag 191
           |||||||||||||||||||||
Sbjct: 745 ttttacagtagcaaatttaag 765
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>ref|XM_730769.1| Plasmodium chabaudi chabaudi hypothetical protein (PC107145.00.0)
           partial mRNA
          Length = 209

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 ttttacagtagcaaatttaag 191
           |||||||||||||||||||||
Sbjct: 81  ttttacagtagcaaatttaag 101
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>emb|BX510321.9| Zebrafish DNA sequence from clone CH211-255P13 in linkage group 2,
             complete sequence
          Length = 160542

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   aaaatctttcagtcttctctt 290
             |||||||||||||||||||||
Sbjct: 65009 aaaatctttcagtcttctctt 65029
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 261      atctcagctaaaatctttcagtctt 285
                ||||||| |||||||||||||||||
Sbjct: 14251312 atctcagataaaatctttcagtctt 14251336
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>gb|AC122441.6| Mus musculus BAC clone RP24-225A21 from chromosome 8, complete sequence
          Length = 177689

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    acagtagcaaatttaagttct 195
              |||||||||||||||||||||
Sbjct: 125882 acagtagcaaatttaagttct 125902
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>gb|AC165960.4| Mus musculus BAC clone RP23-395M20 from chromosome 17, complete sequence
          Length = 192675

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 564    tctgtcttcagcaaactctt 583
              ||||||||||||||||||||
Sbjct: 144427 tctgtcttcagcaaactctt 144408
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>gb|BT017698.1| Zea mays clone EL01N0445D11.c mRNA sequence
          Length = 1186

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 256  agctaatctcagctaaaatctttcagtcttctcttc 291
            |||||| | ||||||||||| ||||| |||||||||
Sbjct: 1092 agctaaccccagctaaaatccttcagccttctcttc 1057



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 631 aaccttttcaccctgtcgctgagaagaactgttattatggagtctgagatgtggct 686
           ||||||||||||| ||| |||||||| || ||  | || ||||| |||||||||||
Sbjct: 562 aaccttttcacccggtcactgagaaggaccgtcgtcatagagtccgagatgtggct 507
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>gb|AC003954.1| Homo sapiens chromosome 5, Pac clone 162o17 (LBNL H147), complete
              sequence
          Length = 122735

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    gaaacttgtttcctttttaa 538
              ||||||||||||||||||||
Sbjct: 105044 gaaacttgtttcctttttaa 105025
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>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete
            sequence
          Length = 147557

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 564  tctgtcttcagcaaactctt 583
            ||||||||||||||||||||
Sbjct: 7071 tctgtcttcagcaaactctt 7052
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>gb|AC145955.3| Gallus gallus chromosome UNK clone CH261-13M13, complete sequence
          Length = 200102

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 516   tttgaaacttgtttcctttt 535
             ||||||||||||||||||||
Sbjct: 10737 tttgaaacttgtttcctttt 10756
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>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence
          Length = 129053

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   gaaatttgtcacagatgatg 396
             ||||||||||||||||||||
Sbjct: 91813 gaaatttgtcacagatgatg 91832
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>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence
          Length = 117666

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   gaaatttgtcacagatgatg 396
             ||||||||||||||||||||
Sbjct: 59844 gaaatttgtcacagatgatg 59825
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>gb|AC109479.3| Homo sapiens chromosome 5 clone RP11-443C10, complete sequence
          Length = 183734

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   ttgaaacttgtttccttttt 536
             ||||||||||||||||||||
Sbjct: 87833 ttgaaacttgtttccttttt 87852
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>emb|CR361543.9| Zebrafish DNA sequence from clone CH211-25E11 in linkage group 8,
             complete sequence
          Length = 66809

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   caaatttaagttctactcaa 201
             ||||||||||||||||||||
Sbjct: 12769 caaatttaagttctactcaa 12750
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>gb|AC116447.10| Homo sapiens chromosome 18, clone RP11-54G14, complete sequence
          Length = 105108

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   cagatgatggccaccttctt 407
             ||||||||||||||||||||
Sbjct: 97565 cagatgatggccaccttctt 97546
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>emb|AL714020.5| Mouse DNA sequence from clone RP23-321G2 on chromosome 11, complete
            sequence
          Length = 42855

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 562  aatctgtcttcagcaaactcttcc 585
            ||||||||||||||| ||||||||
Sbjct: 7612 aatctgtcttcagcacactcttcc 7589
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>dbj|AK027384.1| Homo sapiens cDNA FLJ14478 fis, clone MAMMA1001633, moderately
            similar to ZINC FINGER PROTEIN 165
          Length = 2195

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  cagatgatggccaccttctt 407
            ||||||||||||||||||||
Sbjct: 2116 cagatgatggccaccttctt 2135
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>gb|AC008544.7| Homo sapiens chromosome 5 clone CTC-500G13, complete sequence
          Length = 168008

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   ttgaaacttgtttccttttt 536
             ||||||||||||||||||||
Sbjct: 21380 ttgaaacttgtttccttttt 21399
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>gb|AC018692.9| Homo sapiens BAC clone RP11-555K2 from 4, complete sequence
          Length = 189789

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   ttctcttcaacatagctaat 262
             ||||||||||||||||||||
Sbjct: 25307 ttctcttcaacatagctaat 25288
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>gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, complete sequence
          Length = 156378

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   ttctcttcaacatagctaat 262
             ||||||||||||||||||||
Sbjct: 72755 ttctcttcaacatagctaat 72736
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>emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, complete sequence
          Length = 156514

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   caaatttaagttctactcaa 201
             ||||||||||||||||||||
Sbjct: 16927 caaatttaagttctactcaa 16908
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>gb|AC021015.4| Homo sapiens BAC clone RP11-320C1 from 2, complete sequence
          Length = 148997

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aatctttcagtcttctcttc 291
             ||||||||||||||||||||
Sbjct: 30323 aatctttcagtcttctcttc 30304
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>gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H5, complete sequence
          Length = 156244

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    cagatgatggccaccttctt 407
              ||||||||||||||||||||
Sbjct: 120045 cagatgatggccaccttctt 120064
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>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete
              sequence
          Length = 239189

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 355    aagctgctgtcaggagcatc 374
              ||||||||||||||||||||
Sbjct: 156312 aagctgctgtcaggagcatc 156331
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>emb|BX119956.8| Mouse DNA sequence from clone RP23-301K15 on chromosome X, complete
            sequence
          Length = 187028

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  aagctgctgtcaggagcatc 374
            ||||||||||||||||||||
Sbjct: 2004 aagctgctgtcaggagcatc 2023
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>gb|U15656.1|SAU15656 Schistocerca americana lipocalin Lazarillo precursor mRNA, complete
            cds
          Length = 3057

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 586  aacattttcaggtcaatgtc 605
            ||||||||||||||||||||
Sbjct: 1354 aacattttcaggtcaatgtc 1335
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>gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete
              sequence
          Length = 194387

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 559    tgaaatctgtcttcagcaaa 578
              ||||||||||||||||||||
Sbjct: 117527 tgaaatctgtcttcagcaaa 117546
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>emb|Z38071.1|SALIPLAZ S.americana mRNA for lipocalin Lazarillo
          Length = 3057

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 586  aacattttcaggtcaatgtc 605
            ||||||||||||||||||||
Sbjct: 1354 aacattttcaggtcaatgtc 1335


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,245,434
Number of Sequences: 3902068
Number of extensions: 6245434
Number of successful extensions: 125614
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125285
Number of HSP's gapped (non-prelim): 323
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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