| Clone Name | rbags34f09 |
|---|---|
| Clone Library Name | barley_pub |
>AOC4_ARATH (Q93ZC5) Allene oxide cyclase 4, chloroplast precursor (EC| 5.3.99.6) Length = 254 Score = 201 bits (510), Expect = 2e-51 Identities = 96/147 (65%), Positives = 114/147 (77%), Gaps = 1/147 (0%) Frame = -2 Query: 597 QNALGDLVPFTNKVYNGSLDKRIGITAGICILIQHVPERNGDRYEAIYSMYFGDYGHISL 418 Q LGDLVPFTNK+Y G L KRIGITAG+C+LIQHVPE+ GDR+EA YS YFGDYGHIS+ Sbjct: 108 QLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISV 167 Query: 417 QGPYLTYEESYLAVTGGSGVFEGVYGQVKLNQIVFPFKIFYTFYLKGI-PDLPKELLCXX 241 QGPYLTYE+++LA+TGGSGVFEG YGQVKL Q+V+P K+FYTFYLKG+ DLP EL Sbjct: 168 QGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKH 227 Query: 240 XXXXXXXXXXPAAKATEPHACLNNFTD 160 A+AT+P A + NFT+ Sbjct: 228 VEPSKEVKPAAEAQATQPGATIANFTN 254
>AOC1_ARATH (Q9LS03) Allene oxide cyclase 1, chloroplast precursor (EC| 5.3.99.6) (Early-responsive to dehydration 12 protein) Length = 254 Score = 197 bits (500), Expect = 3e-50 Identities = 91/144 (63%), Positives = 115/144 (79%), Gaps = 1/144 (0%) Frame = -2 Query: 588 LGDLVPFTNKVYNGSLDKRIGITAGICILIQHVPERNGDRYEAIYSMYFGDYGHISLQGP 409 LGDLVPFTNK+Y G L KR+GITAG+C++I+HVPE+NGDR+EA YS YFGDYGH+S+QGP Sbjct: 111 LGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGP 170 Query: 408 YLTYEESYLAVTGGSGVFEGVYGQVKLNQIVFPFKIFYTFYLKGIP-DLPKELLCXXXXX 232 YLTYE+S+LA+TGG+G+FEG YGQVKL Q+V+P K+FYTFYLKG+ DLP EL+ Sbjct: 171 YLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPP 230 Query: 231 XXXXXXXPAAKATEPHACLNNFTD 160 P AKA +P ++NFT+ Sbjct: 231 SKDVEPAPEAKALKPSGVVSNFTN 254
>AOC3_ARATH (Q9LS01) Allene oxide cyclase 3, chloroplast precursor (EC| 5.3.99.6) Length = 258 Score = 196 bits (499), Expect = 3e-50 Identities = 93/144 (64%), Positives = 113/144 (78%), Gaps = 1/144 (0%) Frame = -2 Query: 588 LGDLVPFTNKVYNGSLDKRIGITAGICILIQHVPERNGDRYEAIYSMYFGDYGHISLQGP 409 LGDLVPFTNK+Y G L KR+GITAG+C+LIQHVPE++GDR+EA YS YFGDYGH+S+QG Sbjct: 115 LGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQ 174 Query: 408 YLTYEESYLAVTGGSGVFEGVYGQVKLNQIVFPFKIFYTFYLKGIP-DLPKELLCXXXXX 232 YLTYE+++LAVTGGSG+FEG YGQVKL Q+V+P K+FYTFYLKG+ DLP EL Sbjct: 175 YLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTP 234 Query: 231 XXXXXXXPAAKATEPHACLNNFTD 160 P AKA EP ++NFT+ Sbjct: 235 SKDVKPAPEAKAMEPSGVISNFTN 258
>AOC2_ARATH (Q9LS02) Allene oxide cyclase 2, chloroplast precursor (EC| 5.3.99.6) Length = 253 Score = 192 bits (489), Expect = 5e-49 Identities = 89/144 (61%), Positives = 113/144 (78%), Gaps = 1/144 (0%) Frame = -2 Query: 588 LGDLVPFTNKVYNGSLDKRIGITAGICILIQHVPERNGDRYEAIYSMYFGDYGHISLQGP 409 LGDLVPFTNK+Y G L KR+GITAG+C++I+HVPE+ G+R+EA YS YFGDYGH+S+QGP Sbjct: 110 LGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGP 169 Query: 408 YLTYEESYLAVTGGSGVFEGVYGQVKLNQIVFPFKIFYTFYLKGIP-DLPKELLCXXXXX 232 YLTYE+S+LA+TGG+G+FEG YGQVKL Q+V+P K+FYTFYLKG+ DLP EL Sbjct: 170 YLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPP 229 Query: 231 XXXXXXXPAAKATEPHACLNNFTD 160 P AKA EP ++N+T+ Sbjct: 230 SKDIEPAPEAKALEPSGVISNYTN 253
>TWF1_XENLA (Q68F50) Twinfilin-1| Length = 350 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/60 (23%), Positives = 27/60 (45%) Frame = -2 Query: 510 CILIQHVPERNGDRYEAIYSMYFGDYGHISLQGPYLTYEESYLAVTGGSGVFEGVYGQVK 331 C ++ + +N +E I+ + DY H+ + Y + GG + E ++G VK Sbjct: 67 CYILYRLDSQNAQGFEWIFIAWSPDYSHVRQKMLYAATRATVKKEFGGGHIKEEIFGTVK 126
>ABCAC_HUMAN (Q86UK0) ATP-binding cassette sub-family A member 12 (ATP-binding| cassette transporter 12) (ATP-binding cassette 12) Length = 2595 Score = 30.0 bits (66), Expect = 5.6 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Frame = -2 Query: 177 LNNFTD*LYL*STLPSYVMYTNC------SCSRAS*MNLRVLQSTLKIISSAVR 34 L NF D L S Y+ Y C S +R S NLR+LQST++ S +R Sbjct: 358 LENFEDALLNISANSPYIPYLACVRNVTDSLARGSPENLRLLQSTIRFKKSFLR 411
>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Apoptosis-associated nuclear protein) (Proline- and histidine-rich protein) (Proline- and glutamine-rich protein) (PQ-rich protein) Length = 259 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 9/60 (15%) Frame = -1 Query: 334 QAQPDRLPLQDLLHFLPQGHPGPAKGAALHARP---------AFPHRRANARRQGHRATR 182 Q QP P LH P HP P H P PH + +++ GHR R Sbjct: 194 QPQPQPKPQPQQLHPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPHGHRLLR 253
>CTX80_EUPOC (Q9N9X3) Ciliary WD repeat-containing protein ctxp80| Length = 716 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -1 Query: 502 DPARAGAQRRPLRGHLQHVLR 440 +PARAGA LRGH +HV+R Sbjct: 670 NPARAGATPVSLRGHSEHVVR 690
>MATK_PARAU (Q5YJY5) Maturase K (Intron maturase)| Length = 499 Score = 29.3 bits (64), Expect = 9.5 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = -2 Query: 486 ERNGDRYEAIYSMYFGDYGHISLQGPYLTYEESYLAVTGGSGVFEGVYGQVKLNQIVFPF 307 +RN + +Y+ Y +Y I L +L + SYL +T +FE +Y K+ V F Sbjct: 201 KRNPRFFLFLYNFYVCEYESIFL---FLRNKSSYLRLTSSGVLFERIYFYAKIEHFVEVF 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,354,539 Number of Sequences: 219361 Number of extensions: 1215541 Number of successful extensions: 3226 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3224 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)