ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags34f08 |
|---|---|
| Clone Library Name | barley_pub |
>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)| Length = 286 Score = 58.9 bits (141), Expect = 1e-08 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = -3 Query: 479 ILWVNGTRYVLQEIYGIGDRNRADRNVNED----DSGKECVVCLTEPRDTTVLPCRHMCL 312 +L V G + I R D N+NE+ + EC VCL RD ++PCRH C+ Sbjct: 199 VLSVKGKEFCQNSITVTHVDKRDDDNLNENADDIEEKYECKVCLERQRDAVLMPCRHFCV 258 Query: 311 CRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 C +C L KCP CRQ V ++I V Sbjct: 259 CVQCYFGL---DQKCPTCRQDVTDFIKIFV 285
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 56.2 bits (134), Expect = 8e-08 Identities = 25/52 (48%), Positives = 30/52 (57%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 EC VCL RD +LPCRH C+C +C L KCP CRQ V ++I V Sbjct: 226 ECKVCLERQRDAVLLPCRHFCVCMQCYFAL---DGKCPTCRQDVADFIKIFV 274
>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)| Length = 943 Score = 53.5 bits (127), Expect = 5e-07 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Frame = -3 Query: 449 LQEIYGIGDRNRADRNVN---EDDSGKE---CVVCLTEPRDTTVLPCRHMCLCRECAQTL 288 L++I I D+ +R V+ E D K+ CV+C + P + +LPCRH LC +C L Sbjct: 866 LKQIGSIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKL 925 Query: 287 RFQTNKCPMCRQPVESLLEI 228 KCP+CR +E+ + I Sbjct: 926 ----TKCPICRSHIENKISI 941
>RNF26_HUMAN (Q9BY78) RING finger protein 26| Length = 433 Score = 52.8 bits (125), Expect = 9e-07 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Frame = -3 Query: 401 VNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLR---FQTNKCPMCRQPVESLLE 231 + E + K+CV+C + + +LPCRH+CLC+ C + L CP+CR+ + L Sbjct: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLN 430 Query: 230 I 228 + Sbjct: 431 V 431
>LRSM1_MOUSE (Q80ZI6) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) Length = 727 Score = 50.8 bits (120), Expect = 3e-06 Identities = 22/50 (44%), Positives = 27/50 (54%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 ECVVCL L C H+C C++C Q LR CP+CRQ + L I Sbjct: 678 ECVVCLEREAQMVFLTCGHVCCCQQCCQPLR----TCPLCRQEISQRLRI 723
>CGRF1_MOUSE (Q8BMJ7) Cell growth regulator with RING finger domain 1 (Cell| growth regulatory gene 19 protein) Length = 332 Score = 50.4 bits (119), Expect = 4e-06 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 ++S ++CVVC + +LPCRH CLC C + + +CPMCRQ V+ Sbjct: 268 EESSRDCVVCQNGGVNWVLLPCRHACLCDSCVRYFK----QCPMCRQFVQ 313
>CGRF1_RAT (P97587) Cell growth regulator with RING finger domain 1 (Cell| growth regulatory gene 19 protein) Length = 332 Score = 50.1 bits (118), Expect = 6e-06 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 ++S K+CVVC + +LPCRH CLC C + +CPMCRQ V+ Sbjct: 268 EESSKDCVVCQNGGVNWVLLPCRHACLCDSCVCYFK----QCPMCRQFVQ 313
>CGRF1_HUMAN (Q99675) Cell growth regulator with RING finger domain 1 (Cell| growth regulatory gene 19 protein) Length = 332 Score = 49.7 bits (117), Expect = 7e-06 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +++ K+CVVC + +LPCRH CLC C + + +CPMCRQ V+ Sbjct: 268 EENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMCRQFVQ 313
>LRSM1_HUMAN (Q6UWE0) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) (hTAL) Length = 723 Score = 49.7 bits (117), Expect = 7e-06 Identities = 22/50 (44%), Positives = 27/50 (54%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 ECVVCL L C H+C C++C Q LR CP+CRQ + L I Sbjct: 674 ECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719
>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)| Length = 574 Score = 48.9 bits (115), Expect = 1e-05 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNK-CPMCRQPVESLLE 231 EC +C DT + C HMCLC C L+ + CP+CR+P++ +++ Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIK 569
>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING| finger protein 67) Length = 574 Score = 48.5 bits (114), Expect = 2e-05 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNK-CPMCRQPVESLLE 231 EC +C DT + C HMCLC C L+ + CP+CR+P++ +++ Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIK 569
>NEUR_DROME (P29503) Protein neuralized| Length = 754 Score = 47.8 bits (112), Expect = 3e-05 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECA--QTLRFQTNKCPMCRQPVESLL 234 DS EC +C P D+ + C HMC+C +CA Q +CP+CR + ++ Sbjct: 696 DSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGVGGGQCPLCRAVIRDVI 749
>NEUR_DROVI (Q24746) Protein neuralized| Length = 747 Score = 47.8 bits (112), Expect = 3e-05 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECA--QTLRFQTNKCPMCRQPVESLL 234 DS EC +C P D+ + C HMC+C +CA Q +CP+CR + ++ Sbjct: 689 DSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGVGGGQCPLCRAVIRDVI 742
>PIAP_PIG (O62640) Putative inhibitor of apoptosis| Length = 358 Score = 47.0 bits (110), Expect = 5e-05 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Frame = -3 Query: 455 YVLQEIYGIGDRNRADRNVNED----DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTL 288 +V Q+I I N +D ++ E + C VC+ + +PC H+ +C++CA +L Sbjct: 280 FVQQDIKYIPTENVSDLSMEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSL 339 Query: 287 RFQTNKCPMCRQPVE 243 R KCP+CR ++ Sbjct: 340 R----KCPICRGTIK 350
>MDM2_XENLA (P56273) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) (Xdm2) Length = 473 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 15/73 (20%) Frame = -3 Query: 407 RNVNEDDSGKE-------------CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTN 273 + V ++DS KE CV+C T P++ ++ R H+ C CA+ L+ + Sbjct: 396 QEVTKEDSSKESMESSLPLTSIDPCVICQTRPKNGCIVHGRTGHLMACYTCAKKLKKRNK 455 Query: 272 KCPMCRQPVESLL 234 CP+CR+P++ ++ Sbjct: 456 PCPVCREPIQMIV 468
>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2) (TNFR2-TRAF signaling complex protein 1) (IAP homolog C) (Apoptosis inhibitor 2) (API2) Length = 604 Score = 45.8 bits (107), Expect = 1e-04 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Frame = -3 Query: 455 YVLQEIYGIGDRNRADRNVNED----DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTL 288 +V Q+I I + +D V E + C VC+ + +PC H+ +C++CA +L Sbjct: 526 FVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSL 585 Query: 287 RFQTNKCPMCRQPVE 243 R KCP+CR ++ Sbjct: 586 R----KCPICRSTIK 596
>RFFL_RAT (Q8CIN9) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (FYVE-RING finger protein Sakura) Length = 362 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = -3 Query: 410 DRNVNEDDSGKE---CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 D+N SG E C +C+ P D +L C HM C +C + + N+CP+CRQ V Sbjct: 300 DQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRM----NECPICRQYV 353
>RFFL_MOUSE (Q6ZQM0) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (Fring) Length = 377 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = -3 Query: 410 DRNVNEDDSGKE---CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 D+N SG E C +C+ P D +L C HM C +C + + N+CP+CRQ V Sbjct: 315 DQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRM----NECPICRQYV 368
>RFFL_HUMAN (Q8WZ73) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (FYVE-RING finger protein Sakura) (Fring) (Caspases-8 and -10-associated RING finger protein 2) (CARP-2) (Caspase regulator CARP2) (RING finger protein 189) (RING finge Length = 363 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = -3 Query: 410 DRNVNEDDSGKE---CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 D+N SG E C +C+ P D +L C HM C +C + + N+CP+CRQ V Sbjct: 301 DQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRM----NECPICRQYV 354
>BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell| apoptosis protein) Length = 611 Score = 44.3 bits (103), Expect = 3e-04 Identities = 17/46 (36%), Positives = 28/46 (60%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 + C VC+ + +PC H+ +C+ECA +LR KCP+CR ++ Sbjct: 562 RTCKVCMDKEVSIVFIPCGHLVVCKECAPSLR----KCPICRGTIK 603
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 44.3 bits (103), Expect = 3e-04 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Frame = -3 Query: 428 GDRNRADRNVNEDD-----SGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCP 264 G N ++++ED S EC+VC RDT PC H+ C CA ++ KC Sbjct: 947 GIANEMSQSLHEDPPKSSASLDECLVCSDAKRDTVFKPCGHVSCCETCAPRVK----KCL 1002 Query: 263 MCRQPVES 240 +CR+ V S Sbjct: 1003 ICRETVSS 1010 Score = 37.0 bits (84), Expect = 0.049 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 EC+VC PC HM C C+ ++ KC +CR ++ +L + Sbjct: 1016 ECLVCSDRRAAVFFRPCGHMVACEHCSALMK----KCVLCRTQIDEILSFSL 1063
>IAP1_DROME (Q24306) Apoptosis 1 inhibitor (Inhibitor of apoptosis 1) (dIAP1)| (Protein thread) Length = 438 Score = 43.9 bits (102), Expect = 4e-04 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 K C +C +T LPC H+ C +CA ++ KCP+CR+P ++ + Sbjct: 389 KLCKICYGAEYNTAFLPCGHVVACAKCASSV----TKCPLCRKPFTDVMRV 435
>IAP_GVCP (P41436) Apoptosis inhibitor IAP| Length = 275 Score = 43.9 bits (102), Expect = 4e-04 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 + K C +C E +PC H+ C +CA +KCPMCR+ V S+L++ Sbjct: 223 EDSKLCKICYVEECIVCFVPCGHVVACAKCA----LSVDKCPMCRKIVTSVLKV 272
>BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (HIAP2) (HIAP-2) (C-IAP1) (TNFR2-TRAF signaling complex protein 2) (IAP homolog B) Length = 618 Score = 43.9 bits (102), Expect = 4e-04 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 + C VC+ + +PC H+ +C+ECA +LR KCP+CR Sbjct: 569 RTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR----KCPICR 606
>MDM2_BRARE (O42354) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) Length = 445 Score = 43.9 bits (102), Expect = 4e-04 Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 2/49 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 CV+C + P++ ++ R H+ C CA+ L+ + CP+CR+P++S++ Sbjct: 392 CVICQSRPKNGCIVHGRTGHLMACYTCAKKLKNRNKLCPVCREPIQSVV 440
>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (MIAP2) (MIAP-2) Length = 612 Score = 43.5 bits (101), Expect = 5e-04 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 + C VC+ +PC H+ +C+ECA +LR KCP+CR ++ Sbjct: 563 RTCKVCMDREVSIVFIPCGHLVVCQECAPSLR----KCPICRGTIK 604
>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) Length = 1011 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/58 (32%), Positives = 34/58 (58%) Frame = -3 Query: 398 NEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIK 225 N+ ++ +EC+VC RDT PC H+ C C+ ++ KC +C++ V+S +I+ Sbjct: 812 NDSETLEECMVCSDLKRDTLFGPCGHIATCSLCSPRVK----KCLLCKEQVQSRTKIE 865 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +ECVVC + PC HMC C CA ++ KC CR VE Sbjct: 865 EECVVCSDKKAAVLFQPCGHMCACENCASLMK----KCVQCRAVVE 906
>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) Length = 1006 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/58 (32%), Positives = 34/58 (58%) Frame = -3 Query: 398 NEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIK 225 N+ ++ +EC+VC RDT PC H+ C C+ ++ KC +C++ V+S +I+ Sbjct: 811 NDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVK----KCLICKEQVQSRTKIE 864 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +ECVVC + PC HMC C CA ++ KC CR VE Sbjct: 864 EECVVCSDKKAAVLFQPCGHMCACENCASLMK----KCVQCRAVVE 905
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/58 (32%), Positives = 34/58 (58%) Frame = -3 Query: 398 NEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIK 225 N+ ++ +EC+VC RDT PC H+ C C+ ++ KC +C++ V+S +I+ Sbjct: 811 NDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVK----KCLICKEQVQSRTKIE 864 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +ECVVC + PC HMC C CA ++ KC CR VE Sbjct: 864 EECVVCSDKKAAVLFQPCGHMCACENCANLMK----KCVQCRAVVE 905
>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb| protein) Length = 1030 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +ECVVC + PC HMC C CA ++ KC CR VE Sbjct: 862 EECVVCSDKKAAVLFQPCGHMCACENCASLMK----KCVQCRAVVE 903 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/69 (31%), Positives = 39/69 (56%) Frame = -3 Query: 431 IGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQ 252 +G R+ + + NE + +EC+VC RDT PC H+ C C+ ++ KC +C++ Sbjct: 800 VGSRSPSLNSNNE--TLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVK----KCLICKE 853 Query: 251 PVESLLEIK 225 V+S +I+ Sbjct: 854 QVQSRTKIE 862
>UNK_DROME (Q86B79) Protein unkempt| Length = 599 Score = 42.7 bits (99), Expect = 0.001 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 ++ K+C+ C R T+ PC H+ +C CA+++ +CP C+ PV Sbjct: 551 ENAKKCMKCEENNRTVTLEPCNHLSICNTCAESV----TECPYCQVPV 594
>MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 472 Score = 42.7 bits (99), Expect = 0.001 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 C++C E D PC HM C+ CA Q CP+CR VE + + Sbjct: 384 CMLCCEEEIDAAFCPCGHMVCCQNCAA----QLQSCPVCRSEVEHVQHV 428
>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (MIAP1) (MIAP-1) Length = 600 Score = 42.4 bits (98), Expect = 0.001 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 C VC+ +PC H+ +C++CA +LR KCP+CR ++ Sbjct: 553 CKVCMDREVSIVFIPCGHLVVCKDCAPSLR----KCPICRGTIK 592
>IAP2_DROME (Q24307) Apoptosis 2 inhibitor (Inhibitor of apoptosis 2) (dIAP2)| (DIAP) (IAP homolog A) (IAP-like protein) (DILP) Length = 498 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 C VCL E LPC H+ C +CA ++ CPMCR ++ + Sbjct: 451 CKVCLDEEVGVVFLPCGHLATCNQCAPSVA----NCPMCRADIKGFV 493
>MDM2_CANFA (P56950) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) (Cdm2) Length = 487 Score = 41.2 bits (95), Expect = 0.003 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 CV+C P++ ++ + H+ C CA+ L+ + CP+CRQP++ ++ Sbjct: 434 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 482
>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 C+VC E ++T PC H C CA Q CP+CR VE + + Sbjct: 387 CMVCCEEEINSTFCPCGHTVCCESCAA----QLQSCPVCRSRVEHVQHV 431
>MDM2_HUMAN (Q00987) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Hdm2) Length = 491 Score = 41.2 bits (95), Expect = 0.003 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 CV+C P++ ++ + H+ C CA+ L+ + CP+CRQP++ ++ Sbjct: 438 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 486
>MDM2_HORSE (P56951) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) (Edm2) Length = 491 Score = 41.2 bits (95), Expect = 0.003 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 CV+C P++ ++ + H+ C CA+ L+ + CP+CRQP++ ++ Sbjct: 438 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 486
>MDM2_FELCA (Q7YRZ8) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) Length = 491 Score = 41.2 bits (95), Expect = 0.003 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 CV+C P++ ++ + H+ C CA+ L+ + CP+CRQP++ ++ Sbjct: 438 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 486
>MDM2_MOUSE (P23804) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) Length = 489 Score = 40.8 bits (94), Expect = 0.003 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 CV+C P++ ++ + H+ C CA+ L+ + CP+CRQP++ ++ Sbjct: 436 CVICQGRPKNGCIVHGKTGHLMSCFTCAKKLKKRNKPCPVCRQPIQMIV 484
>ZEF2_IRV6 (P40629) Zinc finger protein| Length = 145 Score = 40.8 bits (94), Expect = 0.003 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 9/52 (17%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQT---------NKCPMCRQPV 246 C++CLT +PC H+ +C C+ L KCP CR P+ Sbjct: 85 CIICLTNQVQILTIPCGHLIMCNPCSLNLNNSVCTRGVNSNYEKCPKCRTPI 136
>MDM2_MESAU (Q60524) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Fragment) Length = 466 Score = 40.4 bits (93), Expect = 0.004 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESL 237 CV+C P++ ++ + H+ C CA+ L+ + CP+CRQP++ + Sbjct: 419 CVICQGRPKNGCIVHGKTGHLMSCFPCAKKLKKRNKPCPVCRQPIQMI 466
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 39.7 bits (91), Expect = 0.008 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQT--LRFQTNKCPMCRQPVE--SLLEIK 225 D + KEC +CL D + PC H +CREC T CP+CR ++ L+ Sbjct: 1034 DGNSKECPICLESADDPVLTPCAHR-MCRECLLTSWRSPSCGLCPICRTILKRTELISCP 1092 Query: 224 VDSMPR 207 DS+ R Sbjct: 1093 TDSIFR 1098
>MYLIP_MOUSE (Q8BM54) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 39.7 bits (91), Expect = 0.008 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 C+ C E ++T PC H C CA Q CP+CR VE + + Sbjct: 387 CMACCEEEINSTFCPCGHTVCCESCAA----QLQSCPVCRSRVEHVQHV 431
>IAP2_NPVOP (O10324) Probable apoptosis inhibitor 2 (IAP-2)| Length = 236 Score = 39.7 bits (91), Expect = 0.008 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 D + EC VC + LPCRH+ +C EC+ + +C +C + S L Sbjct: 183 DAAVSECKVCFVNEKSVCFLPCRHLVVCAECSP----RCKRCCVCNGKIASRL 231
>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)| Length = 381 Score = 39.3 bits (90), Expect = 0.010 Identities = 23/67 (34%), Positives = 33/67 (49%) Frame = -3 Query: 446 QEIYGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKC 267 Q+ YG R EDDS C +C+ D +L C HM C +C + + ++C Sbjct: 316 QKSYG----ERMQLQDEEDDS--LCRICMDAVIDCVLLECGHMVTCTKCGKRM----SEC 365 Query: 266 PMCRQPV 246 P+CRQ V Sbjct: 366 PICRQYV 372
>RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein RIFF)| (Phafin-1) Length = 376 Score = 39.3 bits (90), Expect = 0.010 Identities = 23/67 (34%), Positives = 33/67 (49%) Frame = -3 Query: 446 QEIYGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKC 267 Q+ YG R EDDS C +C+ D +L C HM C +C + + ++C Sbjct: 311 QKSYG----ERMQLQDEEDDS--LCRICMDAVIDCVLLECGHMVTCTKCGKRM----SEC 360 Query: 266 PMCRQPV 246 P+CRQ V Sbjct: 361 PICRQYV 367
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVES 240 + C VCL +PC H+ +C ECA L+ CP+CR PV S Sbjct: 250 RTCKVCLDRAVSIVFVPCGHL-VCAECAPGLQL----CPICRAPVRS 291
>RNF34_BOVIN (Q5E9J6) RING finger protein 34| Length = 375 Score = 39.3 bits (90), Expect = 0.010 Identities = 23/67 (34%), Positives = 33/67 (49%) Frame = -3 Query: 446 QEIYGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKC 267 Q+ YG R EDDS C +C+ D +L C HM C +C + + ++C Sbjct: 310 QKSYG----ERLQLQDEEDDS--LCRICMDAVIDCVLLECGHMVTCTKCGKRM----SEC 359 Query: 266 PMCRQPV 246 P+CRQ V Sbjct: 360 PICRQYV 366
>RHA2B_ARATH (Q9ZU51) RING-H2 zinc finger protein RHA2b| Length = 147 Score = 39.3 bits (90), Expect = 0.010 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = -3 Query: 392 DDSGKECVVCLTEPR---DTTVLPCRHMCLCRECAQ-TLRFQTNKCPMCRQPVESLLEIK 225 D++ +C+VCL++ + + L CRH+ ++C + L+ CP+CR P+ Sbjct: 68 DNAASDCIVCLSKLKTGEEVRKLDCRHV-FHKQCLEGWLQHLNFNCPLCRSPL------- 119 Query: 224 VDSMPRHHQG 195 +P HHQG Sbjct: 120 ---LPHHHQG 126
>IAP4_NPVOP (O10345) Putative apoptosis inhibitor 4 (IAP-4)| Length = 118 Score = 39.3 bits (90), Expect = 0.010 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECA 297 D++ EC+VC++EP+ PC H LC C+ Sbjct: 80 DEANDECIVCMSEPKRMVAAPCGHYTLCVTCS 111
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = -3 Query: 437 YGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMC 258 YG D + + +D ++C +C D V C+H C CA +++KCP+C Sbjct: 220 YGAEDDANYEIHEGDDTFPEDCFICGNPFVDPIVTKCKHY-FCTGCALKSFQKSSKCPIC 278 Query: 257 RQPVESLL 234 +Q E+++ Sbjct: 279 QQNTENIM 286
>RNF34_PONPY (Q5NVC7) RING finger protein 34| Length = 372 Score = 39.3 bits (90), Expect = 0.010 Identities = 23/67 (34%), Positives = 33/67 (49%) Frame = -3 Query: 446 QEIYGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKC 267 Q+ YG R EDDS C +C+ D +L C HM C +C + + ++C Sbjct: 307 QKSYG----ERLQLQDEEDDS--LCRICMDAVIDCVLLECGHMVTCTKCGKRM----SEC 356 Query: 266 PMCRQPV 246 P+CRQ V Sbjct: 357 PICRQYV 363
>RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein RIFF)| (FYVE-RING finger protein Momo) (Human RING finger homologous to inhibitor of apoptosis protein) (hRFI) (Caspases-8 and -10-associated RING finger protein 1) (CARP-1) (Caspase regulat Length = 372 Score = 39.3 bits (90), Expect = 0.010 Identities = 23/67 (34%), Positives = 33/67 (49%) Frame = -3 Query: 446 QEIYGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKC 267 Q+ YG R EDDS C +C+ D +L C HM C +C + + ++C Sbjct: 307 QKSYG----ERLQLQDEEDDS--LCRICMDAVIDCVLLECGHMVTCTKCGKRM----SEC 356 Query: 266 PMCRQPV 246 P+CRQ V Sbjct: 357 PICRQYV 363
>BIRC4_HUMAN (P98170) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP-like protein) (HILP) Length = 497 Score = 38.9 bits (89), Expect = 0.013 Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 20/98 (20%) Frame = -3 Query: 491 IVQQILWVNGTRYVLQEIYGIGDRNRADRNVNEDDSG--------------------KEC 372 I+++ + ++G+ Y E+ + D A ++ +D+S K C Sbjct: 392 IMEEKIQISGSNYKSLEVL-VADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLC 450 Query: 371 VVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMC 258 +C+ +PC H+ C++CA+ + +KCPMC Sbjct: 451 KICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMC 484
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 38.9 bits (89), Expect = 0.013 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQ--PVESLLEIK 225 C +CL E R T PC H+ C EC +CP+CR+ P + L+ ++ Sbjct: 273 CTLCLEERRHPTATPCGHL-FCWECITAWCSSKAECPLCREKFPPQKLIYLR 323
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 38.9 bits (89), Expect = 0.013 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQ--PVESLLEIK 225 C +CL E R T PC H+ C EC +CP+CR+ P + L+ ++ Sbjct: 273 CTLCLEERRHPTATPCGHL-FCWECITAWCSSKAECPLCREKFPPQKLIYLR 323
>BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (RIAP3) (RIAP-3) Length = 496 Score = 38.9 bits (89), Expect = 0.013 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 20/97 (20%) Frame = -3 Query: 488 VQQILWVNGTRYVLQEIYGIGDRNRADRNVNEDDSG--------------------KECV 369 +++ L +G+ Y+ E+ I D A ++ ++D+S K C Sbjct: 392 MEEKLQTSGSNYLSLEVL-IADLVSAQKDNSQDESSQTSLQKDISTEEQLRRLQEEKLCK 450 Query: 368 VCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMC 258 +C+ +PC H+ C++CA+ + +KCPMC Sbjct: 451 ICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMC 483
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 38.9 bits (89), Expect = 0.013 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Frame = -3 Query: 380 KECVVCLTEPRDTTV-LPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLE-IKVDS 216 + C +CL +P + ++ LPC H C C Q CP+C+ PVES++ I+ DS Sbjct: 6 ERCPICLEDPSNYSMALPCLH-AFCYVCITRWIRQNPTCPLCKVPVESVVHTIESDS 61
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 38.9 bits (89), Expect = 0.013 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Frame = -3 Query: 380 KECVVCLTEPRDTTV-LPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLE-IKVDS 216 + C +CL +P + ++ LPC H C C Q CP+C+ PVES++ I+ DS Sbjct: 6 ERCPICLEDPSNYSMALPCLH-AFCYVCITRWIRQNPTCPLCKVPVESVVHTIESDS 61
>BIRC8_GORGO (Q95M71) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) Length = 236 Score = 38.9 bits (89), Expect = 0.013 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 20/103 (19%) Frame = -3 Query: 491 IVQQILWVNGTRYVLQEIYGIGDRNRADRNVNEDDSG--------------------KEC 372 I+++ + +G+ Y E+ + D A ++ E++S K C Sbjct: 131 IMEEKIQTSGSNYKTLEVL-VADLVSAQKDTTENESNQTSLQREISPEEPLRRLQEEKLC 189 Query: 371 VVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +C+ +PC H+ C++CA+ + ++CPMC ++ Sbjct: 190 KICMDRHIAVVFIPCGHLVTCKQCAEAV----DRCPMCNAVID 228
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 38.9 bits (89), Expect = 0.013 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN-KCPMCRQPVESLLEI 228 +ECVVC ++PC H C +CA + ++ +CP CR P + I Sbjct: 432 RECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHI 483
>BIRC8_PANTR (Q95M72) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) Length = 236 Score = 38.5 bits (88), Expect = 0.017 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 20/103 (19%) Frame = -3 Query: 491 IVQQILWVNGTRYVLQEIYGIGDRNRADRNVNEDDSG--------------------KEC 372 I+++ + +G+ Y E+ + D A ++ E++S K C Sbjct: 131 IMEERIQTSGSNYKTLEVL-VADLVSAQKDTTENESNQTSLQREISPEEPLRRLQDEKLC 189 Query: 371 VVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +C+ +PC H+ C++CA+ + ++CPMC ++ Sbjct: 190 KICMDRHIAVVFIPCGHLVTCKQCAEAV----DRCPMCSAVID 228
>MDM4_HUMAN (O15151) Mdm4 protein (p53-binding protein Mdm4) (Mdm2-like| p53-binding protein) (Mdmx protein) (Double minute 4 protein) Length = 490 Score = 38.5 bits (88), Expect = 0.017 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 K C +C PRD ++ R H+ C CA+ L+ CP+C++ ++ ++++ Sbjct: 435 KPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKV 487
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 38.5 bits (88), Expect = 0.017 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCREC--AQTLRFQTNKCPMCRQPV 246 EC +CL D + PC H LCREC A + CP+CR V Sbjct: 793 ECPICLEALEDAVLTPCAHR-LCRECLLASWRNSTSGLCPVCRNTV 837
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 38.5 bits (88), Expect = 0.017 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQ 252 ++ ++C++CL D + PC H+ C C + + +CP+CRQ Sbjct: 281 EASRKCILCLMNMSDPSCAPCGHL-FCWSCLMSWCKERPECPLCRQ 325
>IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)| Length = 249 Score = 38.5 bits (88), Expect = 0.017 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLE 231 EC VC + +PCRH+ +C EC++ + +C +C + +E Sbjct: 201 ECKVCFDREKSVCFMPCRHLAVCTECSR----RCKRCCVCNAKIMQRIE 245
>BIRC4_MOUSE (Q60989) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (MIAP3) (MIAP-3) Length = 496 Score = 38.5 bits (88), Expect = 0.017 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 20/97 (20%) Frame = -3 Query: 488 VQQILWVNGTRYVLQEIYGIGDRNRADRNVNEDDSG--------------------KECV 369 +++ + +G+ Y+ E+ I D A ++ ED+S K C Sbjct: 392 MEEKIQTSGSSYLSLEVL-IADLVSAQKDNTEDESSQTSLQKDISTEEQLRRLQEEKLCK 450 Query: 368 VCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMC 258 +C+ +PC H+ C++CA+ + +KCPMC Sbjct: 451 ICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMC 483
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 38.1 bits (87), Expect = 0.022 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCREC---AQTLRFQTNKCPMCRQPV 246 +CV+CL P + + PC H+ C C A T KCP+CR+ V Sbjct: 205 KCVICLDSPENLSCTPCGHI-FCNFCILSALGTTAATQKCPVCRRKV 250
>YM08_YEAST (P54074) Hypothetical 71.4 kDa protein in ILV2-ADE17 intergenic| region Length = 624 Score = 37.7 bits (86), Expect = 0.029 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -3 Query: 395 EDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQ-TNKCPMCRQPVESLLEI 228 E D C VC R+T + PCR +C +C +L + + C CR V ++ Sbjct: 561 ESDFDLSCAVCKVNERNTVLWPCRCFAICEDCRISLGLRGFSTCVCCRSKVHGYCKV 617
>RAD5_GIBZE (Q4IJ84) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1154 Score = 37.7 bits (86), Expect = 0.029 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%) Frame = -3 Query: 392 DDSGKECVVCLTEP-RDTTVLPCRHMCLCRECA------QTLRFQTNKCPMCRQPV--ES 240 D++ EC +C EP D TV C H C++C QT + + +C CR+P+ Sbjct: 894 DEAENECPLCFEEPMNDQTVTGCWHSA-CKKCLLDYIKHQTDKAEVPRCFSCREPINKRD 952 Query: 239 LLEIKVDSMPRHHQGGDQ*LRNPQRKFRLIASN 141 L E+ RH D + P+ + + N Sbjct: 953 LFEV-----VRHDDDSDMMSKKPRISLQRVGVN 980
>MDM4_MOUSE (O35618) Mdm4 protein (p53-binding protein Mdm4) (Mdm2-like| p53-binding protein) (Mdmx protein) (Double minute 4 protein) Length = 489 Score = 37.7 bits (86), Expect = 0.029 Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCR--HMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 K C +C PRD ++ + H+ C CA+ L+ CP+C++ ++ ++++ Sbjct: 434 KPCSLCEKRPRDGNIIHGKTSHLTTCFHCARRLKKSGASCPVCKKEIQLVIKV 486
>BIRC8_HUMAN (Q96P09) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) (Testis-specific inhibitor of apoptosis) Length = 236 Score = 37.4 bits (85), Expect = 0.038 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 K C +C+ +PC H+ C++CA+ + ++CPMC ++ Sbjct: 187 KLCKICMDRYIAVVFIPCGHLVTCKQCAEAV----DRCPMCSAVID 228
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 37.4 bits (85), Expect = 0.038 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDT-TVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 D S C +C++ D +PC H C C + + +CP+CR PV+S+L Sbjct: 13 DASDNTCTICMSTVSDLGKTMPCLHD-FCFVCIRAWTSTSVQCPLCRCPVQSIL 65
>ATL4L_ARATH (Q9ZT49) RING-H2 finger protein ATL4L (RING-H2 zinc finger protein| RHA3b) Length = 200 Score = 37.0 bits (84), Expect = 0.049 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Frame = -3 Query: 404 NVNEDDSGKECVVCLT---EPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQ---PVE 243 +V + DS EC +C+T E + +LP C + CP CR+ PV+ Sbjct: 103 SVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVK 162 Query: 242 --------SLLEIKVDSMPRHHQGGDQ 186 S E +V P HHQ Q Sbjct: 163 CDRCGHHASTAETQVKDQPPHHQHPSQ 189
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 37.0 bits (84), Expect = 0.049 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -3 Query: 395 EDDSGKECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQTNKCPMCR 255 +D +C +C++ P + + C H+ CR C QTL+ CP+CR Sbjct: 628 QDGEDFDCPICISPPTNIIITRCAHI-FCRACILQTLQRSKPLCPLCR 674
>RNF13_HUMAN (O43567) RING finger protein 13| Length = 381 Score = 36.6 bits (83), Expect = 0.065 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 18/80 (22%) Frame = -3 Query: 431 IGDRNRADRNVNEDDSGKE--------------CVVCLTEPRD---TTVLPCRHMCLCRE 303 + DR+RA RN D K+ C +CL E D +LPC H C+ Sbjct: 207 VQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCK- 265 Query: 302 CAQTLRFQTNK-CPMCRQPV 246 C +T K CP+C+Q V Sbjct: 266 CVDPWLTKTKKTCPVCKQKV 285
>RNF13_CHICK (Q90972) RING finger protein 13 (C-RZF)| Length = 381 Score = 36.6 bits (83), Expect = 0.065 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 18/80 (22%) Frame = -3 Query: 431 IGDRNRADRNVNEDDSGKE--------------CVVCLTEPRD---TTVLPCRHMCLCRE 303 + DR+RA RN D K+ C +CL E D +LPC H C+ Sbjct: 207 VQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCK- 265 Query: 302 CAQTLRFQTNK-CPMCRQPV 246 C +T K CP+C+Q V Sbjct: 266 CVDPWLTKTKKTCPVCKQKV 285
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 36.6 bits (83), Expect = 0.065 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLE 231 +EC +C+ D +LPC H C++C Q+ CP+CR V + E Sbjct: 145 EECCICMDGKADL-ILPCAHS-FCQKCIDKWSGQSRNCPVCRIQVTAANE 192
>Y044_NPVAC (P41449) Hypothetical 15.0 kDa protein in GTA-P79 intergenic region| Length = 131 Score = 36.2 bits (82), Expect = 0.084 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 341 TVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIK 225 T L C H CLC +C +T+ N CP C+ + L+ K Sbjct: 92 TYLHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYK 129
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 36.2 bits (82), Expect = 0.084 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Frame = -3 Query: 422 RNRADRNVNEDDSGKE----CVVCLTEPRDTTVLPCRHMCLCRECAQT-LRFQTNKCPMC 258 +N+A N +E++ C +C ++T + C H+ C +C + + KCP C Sbjct: 631 KNKALSNSSEEEEMLRTFALCTICRNNFKNTALKTCGHL-FCNQCVDDRISNRMRKCPTC 689 Query: 257 RQPVESLLEIKVDSMPRHH 201 + + K+D MP HH Sbjct: 690 SRAFD-----KMDVMPVHH 703
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 36.2 bits (82), Expect = 0.084 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 12/76 (15%) Frame = -3 Query: 443 EIYGIGDRNRADRNVNEDDSGKE----------CVVCLTEPRDTTVLPCRHMCLCRECAQ 294 E Y IG + + E S E C++C D V+PC C EC + Sbjct: 227 EAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIR 286 Query: 293 TLRFQTNK--CPMCRQ 252 T ++++ CP C Q Sbjct: 287 TALLESDEHTCPTCHQ 302
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 36.2 bits (82), Expect = 0.084 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 12/76 (15%) Frame = -3 Query: 443 EIYGIGDRNRADRNVNEDDSGKE----------CVVCLTEPRDTTVLPCRHMCLCRECAQ 294 E Y IG + + E S E C++C D V+PC C EC + Sbjct: 226 EAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIR 285 Query: 293 TLRFQTNK--CPMCRQ 252 T ++++ CP C Q Sbjct: 286 TALLESDEHTCPTCHQ 301
>RNF12_MOUSE (Q9WTV7) RING finger protein 12 (LIM domain-interacting RING finger| protein) (RING finger LIM domain-binding protein) (R-LIM) Length = 600 Score = 35.8 bits (81), Expect = 0.11 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 419 NRADRNVNEDDSGKECVVCLTEPRD---TTVLPCRHMCLCRECAQTLRFQTNKCPMCRQP 249 N A R+ E+D+ K C VC+TE + LPC H C + + CP+CR+ Sbjct: 531 NLAMRSFGENDALKTCSVCITEYTEGDKLRKLPCSHE-FHVHCIDRWLSENSTCPICRRA 589 Query: 248 VES 240 V S Sbjct: 590 VLS 592
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 35.8 bits (81), Expect = 0.11 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQP 249 +C +CL+ + T PC H+ C C + +CP+CR P Sbjct: 326 KCTLCLSTRQHPTATPCGHV-FCWSCIMEWCNEKQECPLCRTP 367
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 35.8 bits (81), Expect = 0.11 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%) Frame = -3 Query: 398 NEDDSGK-ECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQTNK--CPMCRQPVESLLE 231 N+D+S + EC +CL +D V C H+ C C +Q L + N CP+C+ ++ Sbjct: 17 NKDESARFECNICLDAAKDAVVSLCGHL-FCWPCLSQWLDTRPNNQVCPVCKSAIDG--- 72 Query: 230 IKVDSMPRHHQGGDQ*LRNPQRK 162 KV +P + +GGD +P++K Sbjct: 73 NKV--VPIYGRGGDS--SDPRKK 91
>RAD5_ASPFU (Q4WVM1) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1245 Score = 35.8 bits (81), Expect = 0.11 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Frame = -3 Query: 407 RNVNEDDSGKECVVCLTEPR-DTTVLPCRHMCLCRECAQT-LRFQTNK-----CPMCRQP 249 R + + SG EC +C EP D V C H C++C + +R QT+K C CR P Sbjct: 931 RQIQTESSG-ECPICSEEPMIDPAVTACWHSA-CKKCLEDYIRHQTDKGVPPRCFSCRAP 988 Query: 248 VES 240 V S Sbjct: 989 VTS 991
>RNF12_HUMAN (Q9NVW2) RING finger protein 12 (LIM domain-interacting RING finger| protein) (RING finger LIM domain-binding protein) (R-LIM) (NY-REN-43 antigen) Length = 624 Score = 35.4 bits (80), Expect = 0.14 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = -3 Query: 419 NRADRNVNEDDSGKECVVCLTEPRD---TTVLPCRHMCLCRECAQTLRFQTNKCPMCRQP 249 N A R+ E+D+ K C VC+TE + LPC H C + + CP+CR+ Sbjct: 555 NLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHV-HCIDRWLSENSTCPICRRA 613 Query: 248 V 246 V Sbjct: 614 V 614
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 35.4 bits (80), Expect = 0.14 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 377 ECVVCL-TEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKVDS 216 +C +CL + LPC H C +C Q + CP+C V S+L VDS Sbjct: 45 DCPICLDVAATEAQTLPCMHK-FCLDCIQRWTLTSTACPLCNARVTSILH-HVDS 97
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 35.4 bits (80), Expect = 0.14 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 18/71 (25%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLR-FQTNK--CPMCRQP--------------- 249 C +CL RD + C H+ CR C +R N+ CP+C++P Sbjct: 16 CSICLDYLRDPVTIDCGHV-FCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVWQLASL 74 Query: 248 VESLLEIKVDS 216 VE++ +KVD+ Sbjct: 75 VENIERLKVDN 85
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 35.4 bits (80), Expect = 0.14 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 18/71 (25%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLR-FQTNK--CPMCRQP--------------- 249 C +CL RD + C H+ CR C +R N+ CP+C++P Sbjct: 16 CSICLDYLRDPVTIDCGHV-FCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVWQLANL 74 Query: 248 VESLLEIKVDS 216 VE++ +KVD+ Sbjct: 75 VENIERLKVDN 85
>RNF37_MOUSE (Q925F4) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (UbcM4-interacting protein 5) (U-box domain-containing protein 5) Length = 539 Score = 35.0 bits (79), Expect = 0.19 Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 9/58 (15%) Frame = -3 Query: 386 SGKECVVC--------LTEPRDTTVLPCRHMCLCREC-AQTLRFQTNKCPMCRQPVES 240 SG EC C EP LPC H+ LCR C ++ R Q C CRQPV S Sbjct: 477 SGPECASCKQAFSSYSTNEP--VYQLPCGHL-LCRPCLSEKQRSQPMMCTACRQPVTS 531
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 34.7 bits (78), Expect = 0.25 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 18/103 (17%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNK---CPMCRQP--------------- 249 C +CL RD + C H+ CR C +R + CP+C++P Sbjct: 16 CSICLDYLRDPVTIDCGHV-FCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVWQLASL 74 Query: 248 VESLLEIKVDSMPRHHQGGDQ*LRNPQRKFRLIASNRNWMYIY 120 VE++ +KVD + Q G+ + Q+ +L +R ++ Y Sbjct: 75 VENIERLKVD---KGRQPGE--VTREQQDAKLCERHREKLHYY 112
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 34.7 bits (78), Expect = 0.25 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 18/103 (17%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNK---CPMCRQP--------------- 249 C +CL RD + C H+ CR C +R + CP+C++P Sbjct: 16 CSICLDYLRDPVTIDCGHV-FCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVWQLASL 74 Query: 248 VESLLEIKVDSMPRHHQGGDQ*LRNPQRKFRLIASNRNWMYIY 120 VE++ +KVD + Q G+ + Q+ +L +R ++ Y Sbjct: 75 VENIERLKVD---KGRQPGE--VTREQQDAKLCERHREKLHYY 112
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 34.7 bits (78), Expect = 0.25 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 EC +C+ + R +LPC H C++C + CP+CR+ V Sbjct: 154 ECCICM-DGRVDLILPCAHS-FCQKCIDKWSDRHRSCPVCRRQV 195
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 34.7 bits (78), Expect = 0.25 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Frame = -3 Query: 596 SSNQESETEHDAEDTKSLVKFAVFVKKDSAEYGINIVQQILWVNGT--RYVLQEIYGIGD 423 +S+Q++E ++ + ++K K+ E+ N +Q L N ++ +E Y + Sbjct: 559 TSSQKNELINELTEANGMLKS----KELEIEFKENELQTALKKNEKLEEFLSKENYNMNK 614 Query: 422 RNR-ADRNVNEDDSGKE---------CVVCLTEPRDTTVLPCRHMCLCRECA-QTLRFQT 276 + A N++ED +E C +C ++ + C H+ C +C + L + Sbjct: 615 PSSLATTNLDEDSMAEELENFRTLVYCSLCSKNWKNMAIRTCGHV-FCEDCCKERLAARM 673 Query: 275 NKCPMCRQPVES 240 KCP C +P S Sbjct: 674 RKCPTCNKPFSS 685
>ATL3H_ARATH (Q9LJL6) Putative RING-H2 finger protein ATL3H| Length = 141 Score = 34.7 bits (78), Expect = 0.25 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = -3 Query: 404 NVNEDDSGKECVVCLTEPRD---TTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 N N ECVVCL++ D VLP + C + T CP CR+ VE + Sbjct: 69 NANAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTWLHSDYTCPNCRKNVEEIQ 128 Query: 233 EIKVDSMPRHHQG 195 ++ P + G Sbjct: 129 NHELSLSPNPNSG 141
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 34.7 bits (78), Expect = 0.25 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTL---RFQTNKCPMCRQ 252 C +CL R VLPC H C C Q + T CP+CRQ Sbjct: 22 CSICLDRYRCPKVLPCLH-TFCERCLQNYIPPQSLTLSCPVCRQ 64
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 34.7 bits (78), Expect = 0.25 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTL---RFQTNKCPMCRQ 252 C +CL R VLPC H C C Q + T CP+CRQ Sbjct: 22 CSICLDRYRCPKVLPCLH-TFCERCLQNYIPPQSLTLSCPVCRQ 64
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 34.7 bits (78), Expect = 0.25 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQT---LRFQTNKCPMCRQ 252 C +CL ++ VLPC H C C Q T CP+CRQ Sbjct: 23 CSICLERYKNPKVLPCLH-TFCERCLQNYIPAHSLTLSCPVCRQ 65
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 34.7 bits (78), Expect = 0.25 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQT---LRFQTNKCPMCRQ 252 C +CL ++ VLPC H C C Q T CP+CRQ Sbjct: 23 CSICLERYKNPKVLPCLH-TFCERCLQNYIPAHSLTLSCPVCRQ 65
>ATL3D_ARATH (Q9SRM0) Probable RING-H2 finger protein ATL3D| Length = 158 Score = 34.3 bits (77), Expect = 0.32 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = -3 Query: 395 EDDSGKECVVCL---TEPRDTTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 E++ KEC +CL E VLP C H C EC + CP+CR + I Sbjct: 100 EEEEEKECCICLGGFEEGEKMKVLPPCSHCYHC-ECVDRWLKTESSCPLCR------VSI 152 Query: 227 KVDS 216 +VDS Sbjct: 153 RVDS 156
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 34.3 bits (77), Expect = 0.32 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Frame = -3 Query: 377 ECVVCLTEPRD----TTVLPCRHMCLCREC-AQTLRFQTNK-----CPMCRQPVESLLEI 228 EC +C TE + ++ C H C C A+ + FQ NK CP CR P+ + Sbjct: 857 ECAICTTECIEPLSAVSITECLHT-FCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVL 915 Query: 227 KV 222 K+ Sbjct: 916 KL 917
>RNF13_MOUSE (O54965) RING finger protein 13| Length = 381 Score = 34.3 bits (77), Expect = 0.32 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 18/80 (22%) Frame = -3 Query: 431 IGDRNRADRNVNEDDSGKE--------------CVVCLTEPRD---TTVLPCRHMCLCRE 303 + DR+R RN D K+ C +CL E D +LPC H C+ Sbjct: 207 VQDRHRNRRNRLRKDQLKKLPVHKFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCK- 265 Query: 302 CAQTLRFQTNK-CPMCRQPV 246 C +T K CP+C+Q V Sbjct: 266 CVDPWLTKTKKTCPVCKQKV 285
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 34.3 bits (77), Expect = 0.32 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 EC +CL LPC+H+ C C + + +C +CRQ + Sbjct: 35 ECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEI 77
>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Length = 325 Score = 34.3 bits (77), Expect = 0.32 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Frame = -3 Query: 413 ADRNVNEDDSGKECVVCLTEPRD---TTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQPV 246 A EDD G EC VCL E D LP C H EC + CP+CR V Sbjct: 121 AKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGH-GFHAECVDMWLGSHSTCPLCRLTV 179
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 34.3 bits (77), Expect = 0.32 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 11/85 (12%) Frame = -3 Query: 407 RNVNEDDSGKECVVCLTEPRDTTVL-----PCRHMCLCRECAQTLRFQTNKCPMCRQPV- 246 +++ ED G EC +CL E + +L C H+ +EC CP+CR+ + Sbjct: 103 KDLREDKYGLECAICLLEFEEEHILLRLLTTCYHV-FHQECIDQWLESNKTCPVCRRNLD 161 Query: 245 ----ESLLEIKVDSMPRH-HQGGDQ 186 E++ E+ ++ + + H+ DQ Sbjct: 162 PNAPENIKELIIEVIQENAHENRDQ 186
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 34.3 bits (77), Expect = 0.32 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 EC +CL LPC+H+ C C + + +C +CRQ + Sbjct: 35 ECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEI 77
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 34.3 bits (77), Expect = 0.32 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 EC +CL LPC+H+ C C + + +C +CRQ + Sbjct: 37 ECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEI 79
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 34.3 bits (77), Expect = 0.32 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 EC +CL LPC+H+ C C + + +C +CRQ + Sbjct: 36 ECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEI 78
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 34.3 bits (77), Expect = 0.32 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = -3 Query: 404 NVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN---KCPMCRQPVES 240 +V E + +C VCL ++ +L C H C+ C +L + +CP+CRQ V+S Sbjct: 6 SVPELEDRLQCPVCLEVFKEPLMLQCGHS-YCKGCLLSLSRHLDSELRCPVCRQEVDS 62
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 33.9 bits (76), Expect = 0.42 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 +EC +C+ + R +LPC H C++C + CP+CR Sbjct: 153 EECCICM-DGRADLILPCAHS-FCQKCIDKWSDRHRNCPICR 192
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 33.9 bits (76), Expect = 0.42 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 +EC +C+ + R +LPC H C++C + CP+CR Sbjct: 153 EECCICM-DGRADLILPCAHS-FCQKCIDKWSDRHRNCPICR 192
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 33.9 bits (76), Expect = 0.42 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 +EC +C+ + R +LPC H C++C + CP+CR Sbjct: 153 EECCICM-DGRADLILPCAHS-FCQKCIDKWSDRHRNCPICR 192
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 33.9 bits (76), Expect = 0.42 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 380 KECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 +EC +C+ + R +LPC H C++C + CP+CR Sbjct: 153 EECCICM-DGRADLILPCAHS-FCQKCIDKWSDRHRNCPICR 192
>ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing protein 5| Length = 810 Score = 33.9 bits (76), Expect = 0.42 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 +C+ C + R VLPC+H LC CA + ++CP+C+ Sbjct: 768 KCLKCQEQKR--AVLPCQHAALCELCA-----EGSECPICQ 801
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 33.9 bits (76), Expect = 0.42 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQT-LRFQTNKCPMCRQP 249 C +C +DT + C H+ C +CAQ L + KCP C +P Sbjct: 648 CSLCSKNWKDTALKVCGHV-FCHQCAQDRLDARLRKCPNCNKP 689
>ATL2K_ARATH (Q9SLC4) RING-H2 finger protein ATL2K| Length = 217 Score = 33.9 bits (76), Expect = 0.42 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 401 VNEDDSGKECVVCLT---EPRDTTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 + D +G EC VCL+ E + +LP C+H+ C T + CP+CR E Sbjct: 91 IKNDVAGTECAVCLSLLEEKDNARMLPNCKHV-FHVSCVDTWLTTQSTCPVCRTEAEP-S 148 Query: 233 EIKVDSMPRHHQGGD 189 +++ PR GD Sbjct: 149 HPRLEPEPREGPVGD 163
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 33.9 bits (76), Expect = 0.42 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTL-RFQTNKCPMC 258 C C T P+D +L C H+ C C +T+ + KCP C Sbjct: 785 CPSCKTRPKDCIMLKCYHL-FCETCIKTMYDTRQRKCPKC 823
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 33.9 bits (76), Expect = 0.42 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTL-RFQTNKCPMC 258 C C T P+D +L C H+ C C +T+ + KCP C Sbjct: 776 CPSCKTRPKDCIMLKCYHL-FCETCIKTMYDTRQRKCPKC 814
>ZNFP_LYCVA (P18541) RING finger protein Z| Length = 89 Score = 33.5 bits (75), Expect = 0.55 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = -3 Query: 341 TVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 +++ C LCR C L +++CP+C+ P+ + L+I Sbjct: 40 SLVRCHDHYLCRHCLNLLLSVSDRCPLCKYPLPTRLKI 77
>ATL3F_ARATH (Q8L9T5) RING-H2 finger protein ATL3F (RING-H2 finger protein ATL2)| Length = 304 Score = 33.5 bits (75), Expect = 0.55 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = -3 Query: 377 ECVVCLTEPRDTT---VLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKVDSMP 210 EC VCL+E ++ VLP C+H +C + CP+CR VESL I+ + Sbjct: 118 ECAVCLSEFEESETGRVLPNCQHTFHV-DCIDMWFHSHSTCPLCRSLVESLAGIESTAAA 176 Query: 209 RHHQ 198 R + Sbjct: 177 RERE 180
>ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing protein 5| Length = 810 Score = 33.5 bits (75), Expect = 0.55 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 +C+ C + R VLPC+H LC CA + ++CP+C+ Sbjct: 768 KCLKCQEQTR--AVLPCQHAVLCELCA-----EGSECPVCQ 801
>RAD5_SCHPO (P36607) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1133 Score = 33.5 bits (75), Expect = 0.55 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 8/51 (15%) Frame = -3 Query: 377 ECVVCLTEP-RDTTVLPCRHMCLCREC-AQTLRFQTNK------CPMCRQP 249 EC +C EP ++ +L C+H C C +C ++ +++Q + C CRQP Sbjct: 876 ECPICCNEPIQNPLLLNCKHAC-CGDCLSEHIQYQKRRNIIPPLCHTCRQP 925
>IAP3_NPVOP (P41437) Apoptosis inhibitor 3 (IAP-3)| Length = 268 Score = 33.5 bits (75), Expect = 0.55 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEI 228 C +CL + +PC H+ C +CA + CP+CR ++ + + Sbjct: 221 CKICLGAEKTVCFVPCGHVVACGKCAAGV----TTCPVCRGQLDKAVRM 265
>ATL4A_ARATH (Q9M0R7) Putative RING-H2 finger protein ATL4A| Length = 132 Score = 33.5 bits (75), Expect = 0.55 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = -3 Query: 377 ECVVCLTEPRDTTVL----PCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 ECVVCL E +D L PC H+ +C ++ CP+CR V Sbjct: 84 ECVVCLNEFKDDETLRLVPPCVHV-FHADCVDIWLSHSSTCPICRAKV 130
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 33.5 bits (75), Expect = 0.55 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHM----CLCRECAQTLRFQTNKCPMCR 255 C +CL + +LPC+H CL CA TL + KCP CR Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCL-ESCADTLH-RNLKCPECR 84
>MIB2_RAT (Q68LP1) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (RBSC-skeletrophin/dystrophin-like polypeptide) Length = 971 Score = 33.5 bits (75), Expect = 0.55 Identities = 27/117 (23%), Positives = 44/117 (37%) Frame = -3 Query: 572 EHDAEDTKSLVKFAVFVKKDSAEYGINIVQQILWVNGTRYVLQEIYGIGDRNRADRNVNE 393 E A K ++ V + K G +V I R +++E+ + Sbjct: 870 EECARRMKKCIRCQVIISKKLRPDGSEVVNAIQVPGPPRQLVEELQS---------RYRQ 920 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 + C +C+ + V C H C C L N CP+CRQP+ ++I V Sbjct: 921 MEERITCPICI-DSHIRLVFQCGHGA-CAPCGAAL----NACPICRQPIRDRIQIFV 971 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 EC+VC PC+H +C ECA+ ++ KC C+ Sbjct: 847 ECLVCSELALLVLFSPCQHRTVCEECARRMK----KCIRCQ 883
>ATL5F_ARATH (Q9LX93) RING-H2 finger protein ATL5F| Length = 301 Score = 33.5 bits (75), Expect = 0.55 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 4/66 (6%) Frame = -3 Query: 383 GKECVVCLTE---PRDTTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKVDS 216 G EC VCL E +LP C H C T CP+CR PV + E Sbjct: 132 GTECSVCLNEFEEDESLRLLPKCSH-AFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQE 190 Query: 215 MPRHHQ 198 +HQ Sbjct: 191 TETNHQ 196
>MIB2_MOUSE (Q8R516) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (Mind bomb-2) (Skeletrophin) (Dystrophin-like protein) (Dyslike) Length = 973 Score = 33.1 bits (74), Expect = 0.71 Identities = 27/117 (23%), Positives = 44/117 (37%) Frame = -3 Query: 572 EHDAEDTKSLVKFAVFVKKDSAEYGINIVQQILWVNGTRYVLQEIYGIGDRNRADRNVNE 393 E A K ++ V + K G +V I R +++E+ + Sbjct: 872 EECARRMKKCIRCQVVISKKLRPDGSEVVNAIQVPGPPRQLVEELQS---------RYRQ 922 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 + C +C+ + V C H C C L N CP+CRQP+ ++I V Sbjct: 923 MEERITCPICI-DSHIRLVFQCGHGA-CAPCGAAL----NACPICRQPIRDRIQIFV 973 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 EC+VC PC+H +C ECA+ ++ KC C+ + L Sbjct: 849 ECLVCSELALLILFSPCQHRTVCEECARRMK----KCIRCQVVISKKL 892
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 33.1 bits (74), Expect = 0.71 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN---KCPMCRQPVE 243 +C +CL ++ +L C H C+ C +L + +CP+CRQ V+ Sbjct: 15 QCPICLEVFKEPLMLQCGHS-YCKNCLDSLSEHLDSELRCPVCRQSVD 61
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 33.1 bits (74), Expect = 0.71 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Frame = -3 Query: 386 SGKECVVCLTEPRDTTVLPCRHM----CLCRECAQTLRFQTNKCPMCRQPV--ESLLE 231 S +EC +CL + C H+ C+C +C Q + KCP+CR + ++LLE Sbjct: 753 SDEECAICLDSLTVPVITHCAHVFCKPCIC-QCIQNEQPHA-KCPLCRNDIHGDNLLE 808
>RHA2A_ARATH (Q9ZT50) RING-H2 zinc finger protein RHA2a| Length = 155 Score = 33.1 bits (74), Expect = 0.71 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = -3 Query: 383 GKECVVCLT---EPRDTTVLPCRHMCLCRECAQTLRFQTN-KCPMCRQPVES 240 G +CVVCL+ E + L CRH+ ++C + Q N CP+CR + S Sbjct: 83 GSDCVVCLSKLKEGEEVRKLECRHV-FHKKCLEGWLHQFNFTCPLCRSALVS 133
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 33.1 bits (74), Expect = 0.71 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVDSMPRH 204 C VC + ++T + C H+ C EC L + KCP C + + + D+MP H Sbjct: 655 CSVCRSNFKNTILKGCGHV-FCNECVDNRLANRMRKCPSCNKAFD-----RSDAMPAH 706
>TRI56_HUMAN (Q9BRZ2) Tripartite motif protein 56 (RING finger protein 109)| Length = 755 Score = 33.1 bits (74), Expect = 0.71 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQTNKCPMCRQPV 246 C +CL + R LPC H C++C AQ +CP CR+ V Sbjct: 21 CKICLEQLRAPKTLPCLH-TYCQDCLAQLADGGRVRCPECRETV 63
>ZC3H5_CANFA (Q6EE22) Zinc finger CCCH-type domain-containing protein 5| Length = 810 Score = 33.1 bits (74), Expect = 0.71 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 +C+ C + R VLPC+H LC CA + ++CP+C+ Sbjct: 768 KCLKCQEQNR--AVLPCQHAVLCELCA-----EGSECPVCQ 801
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 33.1 bits (74), Expect = 0.71 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = -3 Query: 395 EDDSGKECVVCLTEPRDTTVLPCRH----MCLCRECAQTLRFQTNKCPMCRQP 249 + D+ C +CL ++ CRH MCL R + CP+CR+P Sbjct: 5 DKDNQDICPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKP 57
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 33.1 bits (74), Expect = 0.71 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = -3 Query: 386 SGKECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQT--NKCPMCRQPV--ESLLEIKV 222 S +EC +CL + C H+ C+ C Q ++ + KCP+CR + ++LLE Sbjct: 756 SDEECAICLDSLTVPVITHCAHV-FCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPP 814 Query: 221 DSMPR 207 + + R Sbjct: 815 EELAR 819
>TRIM3_HUMAN (O75382) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) (RING finger protein 97) Length = 744 Score = 33.1 bits (74), Expect = 0.71 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQT---LRFQTNKCPMCRQ 252 C +CL + VLPC H C C Q + T CP+CRQ Sbjct: 22 CSICLDRYQCPKVLPCLH-TFCERCLQNYIPAQSLTLSCPVCRQ 64
>YR311_MIMIV (Q5UPZ3) Hypothetical RING finger protein R311| Length = 659 Score = 32.7 bits (73), Expect = 0.93 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = -3 Query: 431 IGDRNRADRNVNEDD-SGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 I + NR +N D +C VC + T L C H +C C + + CP+C Sbjct: 482 ISNYNRYQKNGFYDSIKDNDCPVCYDDDYIKTKLICGHT-VCLTCVLNILPNSKGCPLCM 540 Query: 254 QPV 246 +P+ Sbjct: 541 EPI 543
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 32.7 bits (73), Expect = 0.93 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNK---CPMCRQPVE 243 +C +CL ++ +L C H C++C L + CP+CRQ V+ Sbjct: 15 QCPICLEVFKEPLMLQCGHS-YCKDCLDNLSQHLDSELCCPVCRQSVD 61
>MIB2_HUMAN (Q96AX9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (Zinc finger ZZ type with ankyrin repeat domain protein 1) (Skeletrophin) (Novelzin) (Novel zinc finger protein) (Putative NF-kappa-B-activating protein 002N) Length = 1013 Score = 32.7 bits (73), Expect = 0.93 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 EC+VC PC+H +C ECA+ ++ KC C+ V L Sbjct: 889 ECLVCSELALLVLFSPCQHRTVCEECARRMK----KCIRCQVVVSKKL 932 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 C +C+ + V C H C C L + CP+CRQP+ ++I V Sbjct: 969 CPICI-DSHIRLVFQCGHGA-CAPCGSAL----SACPICRQPIRDRIQIFV 1013
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)| Length = 250 Score = 32.7 bits (73), Expect = 0.93 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN---KCPMCRQPVE 243 +C +CL +++ +L C H C+ C +L + + +CPMC Q V+ Sbjct: 15 QCPICLEVFKESLMLQCGH-SYCKGCLVSLSYHLDTKVRCPMCWQVVD 61
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 32.7 bits (73), Expect = 0.93 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN---KCPMCRQPVE 243 +C +CL +++ +L C H C+ C +L + + +CPMC Q V+ Sbjct: 15 QCPICLEVFKESLMLQCGH-SYCKGCLVSLSYHLDTKVRCPMCWQVVD 61
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 32.7 bits (73), Expect = 0.93 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 2/123 (1%) Frame = -3 Query: 614 KVEVGMSSNQESETEHDAEDTKSLVKFAVFVKK-DSAEYGINIVQQILWVNGTRYVLQEI 438 +V + S + T+ + K ++ A K+ S E NI+Q+ N T +LQE Sbjct: 561 RVNAKLESTLKEHTDLQESNKKRELELAKLQKQLQSTE---NILQKYK-TNNTNSLLQE- 615 Query: 437 YGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQ-TLRFQTNKCPM 261 ++ + S +C VC +DT + C H+ C +C Q L + +CP Sbjct: 616 --------DEQQLEALRSIAKCSVCSKNWKDTAITVCGHV-FCSKCTQERLAARLRRCPS 666 Query: 260 CRQ 252 C + Sbjct: 667 CNR 669
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 32.7 bits (73), Expect = 0.93 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 9/62 (14%) Frame = -3 Query: 398 NEDDSGKECVVCLTEPRD---TTVLPCRHMCLCRECA-QTLRFQTN-----KCPMCRQPV 246 N+ EC +C TEP D C H C +C + + FQ + KCP CR + Sbjct: 906 NKSFQSLECSICTTEPMDLDKALFTECGH-SFCEKCLFEYIEFQNSKNLGLKCPNCRNQI 964 Query: 245 ES 240 ++ Sbjct: 965 DA 966
>RAD5_YARLI (Q6C2R8) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1025 Score = 32.7 bits (73), Expect = 0.93 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Frame = -3 Query: 401 VNEDDSGKECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQTNK-----CPMCRQP 249 + + + EC +C + + C HM C +C A +RFQ +K C +CRQP Sbjct: 773 LQDQSAPPECPICAEDVTKLAISKCLHMG-CVDCLADNVRFQESKKQTPVCCICRQP 828
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 32.7 bits (73), Expect = 0.93 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Frame = -3 Query: 383 GKECVVCLTE---PRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 G C VC E P PC H C C +T N CP+C PV L+ Sbjct: 123 GDVCAVCTDEIAPPLRCQSFPCLHP-FCIPCMKTWIPLRNTCPLCNTPVAYLI 174
>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)| Length = 964 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLP-CRHMCLCRECAQT-LRFQTNKCPMCRQPVE 243 C +C+ + RD + P C +C C C + L Q +CP CR P++ Sbjct: 15 CFICMEKLRDARLCPHCSKLC-CFSCIRRWLTEQRAQCPHCRAPLQ 59
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN---KCPMCRQPVESLLEIKVDSMPR 207 +C +CL ++ +L C H C+ C +L + +CP+CRQ V+ + S+ R Sbjct: 15 QCPICLEVFKEPLMLQCGHS-YCKGCLVSLSCHLDAELRCPVCRQAVDGSSSLPNVSLAR 73
>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37| Length = 961 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = -3 Query: 374 CVVCLTEPRDTTVLP-CRHMCLCRECAQT-LRFQTNKCPMCRQPVE 243 C +C+ + RD + P C +C C C + L Q +CP CR P++ Sbjct: 15 CFICMEKLRDARLCPHCSKLC-CFSCIRRWLTEQRAQCPHCRAPLQ 59
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 18/71 (25%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN---KCPMCRQP--------------- 249 C +CL RD + C H+ CR C + + CP+C++P Sbjct: 16 CSICLDYLRDPVTIDCGHV-FCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVWQLASL 74 Query: 248 VESLLEIKVDS 216 VE++ +KVD+ Sbjct: 75 VENIERLKVDT 85
>PML_MOUSE (Q60953) Probable transcription factor PML| Length = 808 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -3 Query: 413 ADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQP 249 A++ + E+ C C + + +LPC H LC C + Q CP+C+ P Sbjct: 18 AEQAIQEEFQFLRCPSCQAQAKCPKLLPCLHT-LCSGCLEAPGLQ---CPICKAP 68
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 32.0 bits (71), Expect = 1.6 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 ++ + C++CL+ +D + C H+ C +C + +CP+CR Sbjct: 240 EASRTCMLCLSPMKDPSCGECGHV-FCWKCVLDWVKERQECPLCR 283
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = -3 Query: 395 EDDSGKECVVCLTEPRDTTVLPCRHMC---LCRECAQTLRFQTNKCPMCRQPV 246 E D K C +C +D P R C C +C + + N+CP+C+ V Sbjct: 22 ELDILKRCYIC----KDLLNAPVRTQCDHTYCSQCIREFLLRDNRCPLCKTEV 70
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -3 Query: 374 CVVCLTEPRDTT-VLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 C +CL LPC H C C + CP+C+ PV+SL+ Sbjct: 13 CCICLDAITGAARALPCLH-AFCLACIRRWLEGRPTCPLCKAPVQSLI 59
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -3 Query: 374 CVVCLTEPRDTT-VLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 C +CL LPC H C C + CP+C+ PV+SL+ Sbjct: 13 CCICLDAITGAARALPCLH-AFCLACIRRWLEGRPTCPLCKAPVQSLI 59
>ATL5C_ARATH (Q5EAE9) RING-H2 finger protein ATL5C precursor| Length = 407 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = -3 Query: 383 GKECVVCLTEPRDTTVL----PCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 G EC VCL T VL C+H EC T + CP+CR V+ Sbjct: 143 GLECAVCLARFEPTEVLRLLPKCKH-AFHVECVDTWLDAHSTCPLCRYRVD 192
>ATL2G_ARATH (O64763) RING-H2 finger protein ATL2G precursor (RING-H2 finger| protein ATL9) Length = 378 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = -3 Query: 383 GKECVVCLTEPRDTTVL----PCRHMCLCRECAQTLRFQTNKCPMCR 255 G EC VCL E D L PC H+ +C + + CP+CR Sbjct: 132 GVECAVCLCEFEDDETLRLMPPCCHV-FHADCVDVWLSEHSTCPLCR 177
>Y044_NPVOP (O10304) Hypothetical 13.0 kDa protein (ORF49)| Length = 120 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 C LT + LPC H CLC +C Q N C C+ V+ Sbjct: 73 CRRSLTLTPAVSCLPCGHSCLCTDCDQLF---ANVCFECKSAVQ 113
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 32.0 bits (71), Expect = 1.6 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVES 240 C +C +DT + C H+ C + L + KCP C + S Sbjct: 591 CSLCSKNWKDTVIKTCGHVFCADCCKERLAARMRKCPTCNKGFSS 635
>ZNFP_LYCVP (P19326) RING finger protein Z (Fragment)| Length = 51 Score = 31.6 bits (70), Expect = 2.1 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -3 Query: 341 TVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 +++ C LCR C L +++CP+C+ P+ Sbjct: 20 SLVRCHDHYLCRHCLNLLLTSSDRCPLCKYPL 51
>ZNFP_LASSJ (O73557) Ring-finger protein Z| Length = 98 Score = 31.6 bits (70), Expect = 2.1 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 C C E + ++ C + LC C L +N+CP+C+ P+ + L Sbjct: 30 CKSCWFENKG--LVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKL 74
>YNA8_YEAST (P53983) Hypothetical 76.7 kDa protein in SPO1-SIS1 intergenic| region Length = 669 Score = 31.6 bits (70), Expect = 2.1 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQ-TNKCPMCRQPVESLLEIKV 222 C++C R+ PCR + LC +C +L ++ C C V+ ++ + Sbjct: 617 CLICKVNKRNIVTWPCRCLALCDDCRISLGYKGFATCVSCDSEVKGYSKLNI 668
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQTNKCPM 261 +S EC +CL R+ PC H C+ C +++R +KCP+ Sbjct: 65 ESKYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPV 107
>TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9| Length = 817 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -3 Query: 401 VNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQT 276 + E + +C VC + R+ +LPC H LC+ CA+ + QT Sbjct: 1 MEEMEEELKCPVCGSFYREPIILPCSHN-LCQACARNILVQT 41
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = -3 Query: 386 SGKECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQT--NKCPMCRQPV--ESLLE 231 S +EC +CL + C H+ C+ C Q + + KCP+CR + ++LLE Sbjct: 750 SDEECAICLDSLTFPVITHCAHV-FCKPCICQVIHSEQPHAKCPLCRNEIHGDNLLE 805
>ATL3L_ARATH (Q9LZJ6) RING-H2 finger protein ATL3L (RING-H2 finger protein ATL5)| Length = 257 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = -3 Query: 380 KECVVCLTEPRDTT---VLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 +EC VCL+E + VLP C H+ +C T + CP+CR PV+ Sbjct: 111 EECSVCLSEFEEDDEGRVLPKCGHVFHV-DCIDTWFRSRSSCPLCRAPVQ 159
>RNF6_HUMAN (Q9Y252) RING finger protein 6 (RING-H2 protein)| Length = 685 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = -3 Query: 410 DRNVNEDDSGKECVVCLTE---PRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 + N + + GK C VC+++ LPC H C + CP+CRQPV Sbjct: 620 EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIH-CIDRWLSENCTCPICRQPV 676
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQTNKCPM 261 +S EC +CL R+ PC H C+ C +++R +KCP+ Sbjct: 65 ESKYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPV 107
>TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacting RING| finger protein) Length = 710 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -3 Query: 401 VNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQT 276 + E + +C VC + R+ +LPC H LC+ CA+ + QT Sbjct: 1 MEEMEEELKCPVCGSFYREPIILPCSHN-LCQACARNILVQT 41
>TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger protein 91)| Length = 710 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -3 Query: 401 VNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQT 276 + E + +C VC + R+ +LPC H LC+ CA+ + QT Sbjct: 1 MEEMEEELKCPVCGSFYREPIILPCSHN-LCQACARNILVQT 41
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 +C +CL + + L C H C C Q +CP+C+QP +S+ Sbjct: 103 KCPICLDRFDNVSYLDRCLHK-FCFRCVQEWSKNKAECPLCKQPFDSI 149
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 31.6 bits (70), Expect = 2.1 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 9/128 (7%) Frame = -3 Query: 566 DAEDTKSLVKFAVFVKKDSAEYGINIVQQILWVNGTRYVLQEIYGIGDRNRADRNVNEDD 387 +AE + + KF +K++ QI + N T V +++Y + + + + Sbjct: 772 EAEQDEDMRKFLTSIKEN----------QIRFANDTD-VKEKMYNLYGKIKEEN------ 814 Query: 386 SGKECVVCLTEP---RDTTVLPCRHMCLCRECA-QTLRFQTNK-----CPMCRQPVESLL 234 EC +C P + V PC H C C + L FQ CP CR P+ Sbjct: 815 ---ECSICTQVPIPYSEMVVTPCAHT-FCLSCILEHLDFQKELKKEKLCPNCRSPISKYQ 870 Query: 233 EIKVDSMP 210 ++ + P Sbjct: 871 LFRIRNQP 878
>MIB2_CHICK (Q5ZIJ9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) Length = 954 Score = 31.6 bits (70), Expect = 2.1 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLE 231 EC+VC PC+H +C EC++ ++ KC C+ + L+ Sbjct: 829 ECLVCSELALLIHFFPCQHSIVCEECSRRMK----KCIKCQVTITKKLK 873
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 +C +CL + + L C H C C Q +CP+C+QP +S+ Sbjct: 102 KCPICLDRFDNVSYLDRCLHK-FCFRCVQEWSKNKAECPLCKQPFDSI 148
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -3 Query: 374 CVVCLTEPRDTTVL-PCRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 C++C D L PC H C C +++ CP CR PVE + Sbjct: 303 CIICQDLLHDCVSLQPCMHT-FCAACYSGWMERSSLCPTCRCPVERI 348
>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -3 Query: 374 CVVCLTEPRDTTVL-PCRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 C++C D L PC H C C +++ CP CR PVE + Sbjct: 304 CIICQDLLHDCVSLQPCMHT-FCAACYSGWMERSSLCPTCRCPVERI 349
>ZNFP_LYCVT (P19325) RING finger protein Z (Fragment)| Length = 71 Score = 31.2 bits (69), Expect = 2.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -3 Query: 329 CRHMCLCRECAQTLRFQTNKCPMCRQPV 246 C LCR C L +++CP+C+ P+ Sbjct: 44 CHDHYLCRHCLNLLLTSSDRCPLCKYPL 71
>ZFP_IRV6 (P47732) Zinc finger protein| Length = 208 Score = 31.2 bits (69), Expect = 2.7 Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 7/121 (5%) Frame = -3 Query: 596 SSNQESETEHDAEDTK------SLVKFAVFVKKDSAEYGINIVQQILWVNGTRYVLQEIY 435 S N E + +D K ++F FVK S N + N L Sbjct: 87 SDNPFEEHKKHTQDLKINCLFVKSIEFDNFVKNHSESCFQNPI-----TNNINQDLDHNQ 141 Query: 434 GIGDRNRADRNVNEDDSGK-ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMC 258 + D+N D C +C T ++PC H C EC F+ CP+C Sbjct: 142 DLDHNQDLDQNSTTSDCDVLTCKICFTNKITKVLIPCGHSS-CYECV----FKLQTCPIC 196 Query: 257 R 255 + Sbjct: 197 K 197
>PEX2_HUMAN (P28328) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) (RING finger protein 72) Length = 305 Score = 31.2 bits (69), Expect = 2.7 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -3 Query: 386 SGKECVVCLTEPRDTTVLPCRHMCLCRECAQT--LRFQTNKCPMCRQPVESLLEIK 225 SGKEC +C P + C H+ C CA++ L CP C V SL +K Sbjct: 240 SGKECALCGEWPTMPHTIGCEHI-FCYFCAKSSFLFDVYFTCPKCGTEVHSLQPLK 294
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 31.2 bits (69), Expect = 2.7 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 4/121 (3%) Frame = -3 Query: 602 GMSSNQESETEHDAEDTKSLVKFAVFVKKDSAEYGINIVQQILW---VNGTRYVLQEIYG 432 GM + + + T+ L + + + K E+ + + +L N T +LQE Sbjct: 571 GMKDKYSDKVQENTSFTQELNEKNLMMGK--LEHKLKSTESLLKKYKTNNTSSILQE--- 625 Query: 431 IGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQ-TLRFQTNKCPMCR 255 +R + S +C VC +DT + C H+ C C Q L + +CP C Sbjct: 626 ------DERQLEALRSIAKCSVCSKNWKDTAITVCGHV-FCLGCTQERLAARLRRCPTCN 678 Query: 254 Q 252 + Sbjct: 679 K 679
>YQDA_CAEEL (Q09268) Hypothetical RING finger protein C32D5.10 in chromosome II| Length = 610 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLP--CRHMCLCRECAQTLRFQTNKCPMCRQPV 246 D+ +EC VC E DTT L C C + CPMC+ PV Sbjct: 35 DEPEEECSVCKNEIIDTTSLSDCCHEFCYDCIVGWLTKGSGPFCPMCKTPV 85
>ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E| Length = 204 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = -3 Query: 377 ECVVCLTEPRD---TTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 ECVVCL+E D VLP EC + + CP+CR+ V Sbjct: 87 ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRV 133
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 31.2 bits (69), Expect = 2.7 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVES 240 C +C ++T + C H+ C + L + KCP C +P S Sbjct: 611 CSLCSKNWKNTALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSS 655
>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF| receptor) Length = 643 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Frame = -3 Query: 401 VNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 VN DD C +C + LPC H+ C ++ Q CP CR L I Sbjct: 336 VNNDD----CAICWDSMQAARKLPCGHL-FHNSCLRSWLEQDTSCPTCRMS----LNIAD 386 Query: 221 DSMPRH-HQG 195 S R HQG Sbjct: 387 GSRAREDHQG 396
>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)| (AMF receptor) (gp78) Length = 643 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/69 (30%), Positives = 28/69 (40%) Frame = -3 Query: 401 VNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 VN DD C +C + LPC H+ C ++ Q CP CR SL Sbjct: 336 VNNDD----CAICWDSMQAARKLPCGHL-FHNSCLRSWLEQDTSCPTCRM---SLNIADN 387 Query: 221 DSMPRHHQG 195 + + HQG Sbjct: 388 NRVREEHQG 396
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = -3 Query: 437 YGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMC 258 YG+ + + +E++ +C +C ++ V CRH C CA T +C +C Sbjct: 241 YGVYEDENYEVGSDEEEIPFKCFICRQTFQNPVVTKCRHY-FCESCALQHFRTTPRCYVC 299 Query: 257 RQ 252 Q Sbjct: 300 DQ 301
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 12/68 (17%) Frame = -3 Query: 392 DDSGK-ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN-----------KCPMCRQP 249 D SG C +CL R+ LPC H C C L + +CP+C++P Sbjct: 2 DGSGPFSCPICLEPLREPVTLPCGHN-FCLACLGALWPHRSAGGTGGSGGPARCPLCQEP 60 Query: 248 VESLLEIK 225 L+++ Sbjct: 61 FPDGLQLR 68
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -3 Query: 392 DDSGKECVVCLTEPRDTTVLPCRHMCLCREC-AQTLRFQTNKCPMCR 255 D + + C +C +D + PC H+ LC C A + CP CR Sbjct: 345 DSTFELCKICAESNKDVKIEPCGHL-LCSCCLAAWQHSDSQTCPFCR 390
>TRI56_MOUSE (Q80VI1) Tripartite motif protein 56| Length = 734 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN-KCPMCRQ----PVESLLEIKVD 219 C +CL + LPC H C++C L +CP CR+ P E + K + Sbjct: 21 CKICLEQLHTPKTLPCLH-TYCQDCLAQLDIGGQVRCPECREIVPVPAEGVAAFKTN 76
>ATL5O_ARATH (Q9LUZ9) Putative RING-H2 finger protein ATL5O| Length = 308 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = -3 Query: 410 DRNVNEDDSGKECVVC--LTEPRD--TTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPV 246 + N E+D +ECV+C L E D + C H EC + CP+CR PV Sbjct: 126 EENEEEEDEEEECVICLGLWEAGDFGRKLRNCGH-GFHVECIDMWLSSHSTCPLCRSPV 183
>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 +S C +CL D +LPC H LC CA R + C +PVES+ Sbjct: 5 ESELTCPICLELLEDPLLLPCAH-SLCFNCAH--RILVSHC-ATNEPVESI 51
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 19 CPICLDMLKNTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRPD 71
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL + T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 46 CPICLDMLKKTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRAD 98
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 30.8 bits (68), Expect = 3.5 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVES 240 +C++C + L C H C C + +CP+CR+ +ES Sbjct: 405 QCIICSEYFIEAVTLNCAHS-FCSFCINEWMKRKVECPICRKDIES 449
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 48 CPICLDMLKNTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRPD 100
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 48 CPICLDMLKNTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRPD 100
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 48 CPICLDMLKNTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRPD 100
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 48 CPICLDMLKNTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRPD 100
>ATL2N_ARATH (O22255) RING-H2 finger protein ATL2N| Length = 227 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Frame = -3 Query: 413 ADRNVNEDDSGKECVVCLTEPRDTT---VLP-CRHMCLCRECAQTLRFQTNKCPMCRQPV 246 + +N + +EC VCL+E + +LP C H +C T + CP+CR PV Sbjct: 95 SSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV-DCIDTWFRSRSTCPLCRAPV 153 Query: 245 ESLLEI 228 + ++ Sbjct: 154 QPPFQV 159
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 48 CPICLDMLKNTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRPD 100
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCR 255 C VCL + ++ C H CR C ++ KCP+CR Sbjct: 8 CAVCLDFFVEPCIIECGHS-YCRFCIESHLNINEKCPLCR 46
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 47 CPICLDMLKNTMTTKECLHR-FCSDCIVTALRSGNKECPTCRKKLVSKRSLRPD 99
>RNF11_MOUSE (Q9QYK7) RING finger protein 11 (NEDD4 WW domain-binding protein 2)| (Sid 1669) Length = 154 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = -3 Query: 380 KECVVCLTE---PRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 +ECV+C+ + LPC H+ +C ++ CP C +PV++ L Sbjct: 97 RECVICMMDFVYGDPIRFLPCMHIYHL-DCIDDWLMRSFTCPSCMEPVDAAL 147
>RNF11_HUMAN (Q9Y3C5) RING finger protein 11 (Sid 1669)| Length = 154 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = -3 Query: 380 KECVVCLTE---PRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 +ECV+C+ + LPC H+ +C ++ CP C +PV++ L Sbjct: 97 RECVICMMDFVYGDPIRFLPCMHIYHL-DCIDDWLMRSFTCPSCMEPVDAAL 147
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 51 CPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVSKRSLRPD 103
>ATL4C_ARATH (Q9M0R5) Putative RING-H2 finger protein ATL4C precursor| Length = 345 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 9/64 (14%) Frame = -3 Query: 383 GKECVVCLTEPRDTTVL----PCRHMCLCRECAQTLRFQTNKCPMCR-----QPVESLLE 231 G EC +CL+E D L PC H C + CP+CR +P ES Sbjct: 120 GVECAICLSEFEDQETLRWMPPCSH-TFHANCIDVWLSSWSTCPVCRANLSLKPGESYPY 178 Query: 230 IKVD 219 + +D Sbjct: 179 LNMD 182
>TRI18_RAT (P82458) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 +S C +CL D +LPC H LC CA R + C +PVES+ Sbjct: 5 ESELTCPICLELFEDPLLLPCAH-SLCFNCAH--RILVSHC-ATNEPVESI 51
>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor| Length = 327 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 4/47 (8%) Frame = -3 Query: 383 GKECVVCLTEPRDTTVL----PCRHMCLCRECAQTLRFQTNKCPMCR 255 G EC +CL E D L PC H C + CP+CR Sbjct: 125 GVECAICLNEFEDEETLRLMPPCSH-AFHASCIDVWLSSRSTCPVCR 170
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 51 CPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVSKRSLRPD 103
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 51 CPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVSKRSLRPD 103
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 51 CPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVSKRSLRPD 103
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 374 CVVCLTEPRDT-TVLPCRHMCLCRECAQT-LRFQTNKCPMCRQPVESLLEIKVD 219 C +CL ++T T C H C +C T LR +CP CR+ + S ++ D Sbjct: 51 CPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVSKRSLRPD 103
>TRI18_MOUSE (O70583) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Midin) Length = 680 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 +S C +CL D +LPC H LC CA R + C +PVES+ Sbjct: 5 ESELTCPICLELFEDPLLLPCAH-SLCFNCAH--RILVSHC-ATNEPVESI 51
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 12/68 (17%) Frame = -3 Query: 392 DDSGK-ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTN-----------KCPMCRQP 249 D SG C +CL R+ LPC H C C L +CP+C++P Sbjct: 2 DGSGPFSCPICLEPLREPVTLPCGHN-FCLACLGALWPHRGASGAGGPGGAARCPLCQEP 60 Query: 248 VESLLEIK 225 L+++ Sbjct: 61 FPDGLQLR 68
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/62 (24%), Positives = 28/62 (45%) Frame = -3 Query: 437 YGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMC 258 YG+ + + ++++ +C +C ++ V CRH C CA T +C +C Sbjct: 241 YGVYEDENYEVGSDDEEIPFKCFICRQSFQNPVVTKCRHY-FCESCALQHFRTTPRCYVC 299 Query: 257 RQ 252 Q Sbjct: 300 DQ 301
>ATL3I_ARATH (Q7X843) RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion| protein) Length = 349 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMC---LCRECAQTLRFQTNKCPMCRQPVES 240 +C VCL E DT L +C C T + CP+CR+ + + Sbjct: 206 DCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLST 254
>ATL3C_ARATH (Q9SG96) RING-H2 finger protein ATL3C| Length = 181 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = -3 Query: 392 DDSGKECVVCLTEPRD---TTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQ 252 D EC++CL + D VLP C H R C T + CP CRQ Sbjct: 108 DMKATECLICLGDFEDGEKVRVLPKCNHGFHVR-CIDTWLLSRSSCPTCRQ 157
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%) Frame = -3 Query: 389 DSGKECVVCLTEPRD---TTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLL 234 D G C VC E PC H C C +T N CP+C + L+ Sbjct: 111 DEGDVCAVCTDEIAPHLRCDTFPCMHR-FCIPCMKTWMQLRNTCPLCNAKLVYLI 164
>ATL2L_ARATH (Q9SLC3) RING-H2 finger protein ATL2L| Length = 236 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = -3 Query: 386 SGKECVVCLT---EPRDTTVLP-CRHMCLCRECAQTLRFQTNKCPMCRQPVE 243 S EC VCL+ E LP C+H+ +C T + CP+CR VE Sbjct: 104 SATECAVCLSVLKEQDKARELPNCKHIFHV-DCVDTWLTTCSTCPVCRTEVE 154
>TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Putative transcription factor XPRF) (Midin) (RING finger protein 59) (Midline 1 RING finger protein) Length = 667 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 12/74 (16%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTL---RFQTN---------KCPMCRQPV 246 +S C +CL D +LPC H LC CA + TN +CP CR V Sbjct: 5 ESELTCPICLELFEDPLLLPCAH-SLCFNCAHRILVSHCATNESVESITAFQCPTCRH-V 62 Query: 245 ESLLEIKVDSMPRH 204 +L + +D + R+ Sbjct: 63 ITLSQRGLDGLKRN 76
>BIOI_BACSU (P53554) Biotin biosynthesis; cytochrome P450-like enzyme (EC| 1.14.-.-) Length = 395 Score = 30.0 bits (66), Expect = 6.0 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%) Frame = -3 Query: 638 DHVFPLAFKVEVGMSSNQESETEHDAEDTKSLVKFAVFVKKDSA--EYGINIVQQILWVN 465 D FPLA V + E + E E SL++ F + A E I VQ + + Sbjct: 134 DFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFK 193 Query: 464 GT-----RYVLQEIYGIGDRNRADRNVNEDDSGKECVVCLTEPRDTTV--LPCRHMCLCR 306 R+ Q++ + + R + E+++ C++ +TTV + +CL + Sbjct: 194 ELIQKRKRHPQQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQ 253 Query: 305 ECAQTLRFQTN 273 Q L+ + N Sbjct: 254 HPEQLLKLREN 264
>ATL4I_ARATH (O49691) Putative RING-H2 finger protein ATL4I| Length = 289 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 5/60 (8%) Frame = -3 Query: 407 RNVNEDDSGKECVVCLTEPRDTTVL----PCRHMCLCRECAQTLRFQTNK-CPMCRQPVE 243 +++ E+ G EC +CL E VL C H+ +EC L F++++ CP+CR+ ++ Sbjct: 99 KDLREEKYGLECAICLLEFDGDHVLRLLTTCYHV-FHQECID-LWFESHRTCPVCRRDLD 156
>RFP2_MOUSE (Q9CYB0) Ret finger protein 2 (Putative tumor suppressor RFP2)| (Tripartite motif-containing protein 13) Length = 407 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 10/51 (19%) Frame = -3 Query: 374 CVVCLTEPRDTTVLPCRHMCLCRECAQTL----------RFQTNKCPMCRQ 252 C +C + D VLPC H C++C + L R KCP CR+ Sbjct: 10 CPICCSLFDDPRVLPCSHN-FCKKCLEGLLEGNVRNSLWRPSPFKCPTCRK 59
>DEAF1_PANTR (O77562) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 565 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%) Frame = +3 Query: 114 RDIYIHPITVASNQTELPLRVS*LLISSLMMPGHAVNLNLKKALNRLPAHG-AFVG---- 278 ++I + P T A+ T P + S + A + ++ PA G F G Sbjct: 320 KNITLLPATAATTFTVTPSGQ--ITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQ 377 Query: 279 ---LEP*CLSTLPA*AHMPAWKNSC-ISWFCKTD-HTFFPRIILINIPVRSVPVP 428 ++P C ++ P H P +++SC I+ F + T P+I+L ++P +VP P Sbjct: 378 EASVQPPCRASHPE-PHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPP 431
>DEAF1_HUMAN (O75398) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5) Length = 565 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%) Frame = +3 Query: 114 RDIYIHPITVASNQTELPLRVS*LLISSLMMPGHAVNLNLKKALNRLPAHG-AFVG---- 278 ++I + P T A+ T P + S + A + ++ PA G F G Sbjct: 320 KNITLLPATAATTFTVTPSGQ--ITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQ 377 Query: 279 ---LEP*CLSTLPA*AHMPAWKNSC-ISWFCKTD-HTFFPRIILINIPVRSVPVP 428 ++P C ++ P H P +++SC I+ F + T P+I+L ++P +VP P Sbjct: 378 EASVQPPCRASHPE-PHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPP 431
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Frame = -3 Query: 410 DRNVNEDDSGKE-------CVVCLTEPRDTTVLPCRHMCLCRECAQTLR--FQTNKCPMC 258 D + D+S +E C VCL VL C H+ C C F+ + CP+C Sbjct: 7 DITMKNDESQEEEIPDQFLCCVCLELLYKPIVLSCGHLS-CFWCVHKSMNGFRESHCPIC 65 Query: 257 RQP 249 R P Sbjct: 66 RDP 68
>PEX2_RAT (P24392) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = -3 Query: 386 SGKECVVCLTEPRDTTVLPCRHMCLCRECAQT--LRFQTNKCPMCRQPVESLLEIK 225 SGKEC +C P + C H+ C C ++ L CP C V S+ +K Sbjct: 240 SGKECALCGEWPTMPHTIGCEHV-FCYYCVKSSFLFDMYFTCPKCGTEVHSVQPLK 294
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = -3 Query: 395 EDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVESL 237 EDD C++C D V C H C CA + +KC C Q L Sbjct: 257 EDDIPFACLICRKAFTDPVVTRCAHY-FCSSCAIKRFAKNSKCFACGQQTGGL 308
>SAN1_YEAST (P22470) Protein SAN1| Length = 610 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 335 LPCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIK 225 LPC H+ REC N CP+CRQ + + ++ Sbjct: 255 LPCGHI-FGRECIYKWSRLENSCPLCRQKISESVGVQ 290
>ATL4D_ARATH (Q9M0R4) Putative RING-H2 finger protein ATL4D precursor| Length = 357 Score = 29.6 bits (65), Expect = 7.9 Identities = 29/100 (29%), Positives = 38/100 (38%), Gaps = 5/100 (5%) Frame = -3 Query: 389 DSGKECVVCLTEPRDTTVL----PCRHMCLCRECAQTLRFQTNKCPMCRQPVESLLEIKV 222 + G EC +CL E D L PC H C + CP+CR + L +K Sbjct: 115 NGGVECAICLCEFEDEEPLRWMPPCSH-TFHANCIDEWLSSRSTCPVCR----ANLSLKS 169 Query: 221 -DSMPRHHQGGDQ*LRNPQRKFRLIASNRNWMYIYIAC*N 105 DS P H D N QR + R+ + C N Sbjct: 170 GDSFP--HPSMDVETGNAQRGVQESPDERSLTGSSVTCNN 207
>ATL2J_ARATH (O80927) RING-H2 finger protein ATL2J| Length = 235 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Frame = -3 Query: 407 RNVNEDDSGKECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQT-----NKCPMCRQPVE 243 ++ + + G EC VCL D+ L R + C+ L +T CP+CR V Sbjct: 131 KDTHSKEIGNECSVCLMVFTDSDEL--RQLSECKHAFHVLCIETWLKDHPNCPICRTDVS 188 Query: 242 SLLEIKVDSMPRHHQG 195 + + ++P + G Sbjct: 189 VKQQTEAPNVPVNVNG 204
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/46 (26%), Positives = 22/46 (47%) Frame = -3 Query: 377 ECVVCLTEPRDTTVLPCRHMCLCRECAQTLRFQTNKCPMCRQPVES 240 +C++C + L C H C C + +CP+CR+ ++S Sbjct: 402 QCIICSEYFIEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDIKS 446
>Y301_BUCBP (Q89AI5) Hypothetical protein bbp_301| Length = 221 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%) Frame = +3 Query: 378 FPRIILINIPVRSVPVPNTVYLLQDIS-SSIY-PQYLLHNVDPIF 506 FP+ IL I + ++ PN+ Y++ IS +SIY + +LH + PI+ Sbjct: 173 FPKNILKKIFITNITFPNSKYIISLISANSIYQKKEVLHKIIPIY 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,707,217 Number of Sequences: 219361 Number of extensions: 1904517 Number of successful extensions: 5209 Number of sequences better than 10.0: 235 Number of HSP's better than 10.0 without gapping: 4981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5168 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
