ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC146718.2| Oryza sativa chromosome 3 B1130H05 genomic seque... 137 4e-29
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 137 4e-29
3gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genom... 137 4e-29
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
5dbj|AK064735.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
6dbj|AK063641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
7gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 44 0.47
8emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC... 42 1.9
9gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 42 1.9
10gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complet... 42 1.9
11gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 7.4
12gb|AC069309.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.4
13gb|AC161121.3| Pan troglodytes BAC clone CH251-720M8 from chromo... 40 7.4
14gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complet... 40 7.4
15gb|AY232099.1| Drosophila yakuba clone yak-ad_CG11876 mRNA sequence 40 7.4
16emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 i... 40 7.4
17emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on ch... 40 7.4
18emb|AL441989.13| Human DNA sequence from clone RP11-360A18 on ch... 40 7.4
19ref|XM_964957.1| PREDICTED: Tribolium castaneum similar to CG208... 40 7.4
20gb|AC117459.6| Homo sapiens 3 BAC RP11-343L17 (Roswell Park Canc... 40 7.4
21emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.4
22emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 7.4
23emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 40 7.4
24emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC... 40 7.4
25emb|AJ312124.1|EAC312124 Eubacterium acidaminophilum ORF1 (parti... 40 7.4
26emb|AJ243297.1|HSA243297 Homo sapiens partial RET gene, exons 2 ... 40 7.4
27emb|CR853303.6| Pig DNA sequence from clone PigE-173F2, complete... 40 7.4
28gb|AC008646.7| Homo sapiens chromosome 5 clone CTB-182O9, comple... 40 7.4
29gb|AE005738.1| Caulobacter crescentus CB15 section 64 of 359 of ... 40 7.4
30gb|AC124971.15| Medicago truncatula clone mth2-22h8, complete se... 40 7.4
31gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 40 7.4
32gb|AC008415.6| Homo sapiens chromosome 5 clone CTC-283O18, compl... 40 7.4
33gb|AC151582.3| Pan troglodytes BAC clone RP43-3F18 from chromoso... 40 7.4
34emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chr... 40 7.4
35dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.4
36gb|AC005993.2|AC005993 Homo sapiens PAC clone RP6-114E22 from 14... 40 7.4
37emb|AL391749.4|CNS06C8I Human chromosome 14 DNA sequence BAC R-2... 40 7.4
38gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 7.4
39emb|AL845449.4| Mouse DNA sequence from clone RP23-211M20 on chr... 40 7.4
40emb|AL928564.8| Mouse DNA sequence from clone RP23-255J22 on chr... 40 7.4
41emb|AL713968.9| Mouse DNA sequence from clone RP23-387L21 on chr... 40 7.4 
>gb|AC146718.2| Oryza sativa chromosome 3  B1130H05 genomic sequence, complete sequence
          Length = 49565

 Score =  137 bits (69), Expect = 4e-29
 Identities = 81/85 (95%)
 Strand = Plus / Plus

                                                                         
Query: 462   gtctggcggcggaggcgcttccggagcttgcgcagcttgtgcttgttcatcttgcgtttc 521
             ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 34004 gtctggcggcggaggcgcttccgtagcttgcggagcttgtgcttgttcatcttgcgcttc 34063

                                      
Query: 522   cgcttcttcttgacgctgtccgccc 546
             ||||||||||| |||||||||||||
Sbjct: 34064 cgcttcttcttcacgctgtccgccc 34088
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 4e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                            
Query: 462      gtctggcggcggaggcgcttccggagcttgcgcagcttgtgcttgttcatcttgcgtttc 521
                ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 26151822 gtctggcggcggaggcgcttccgtagcttgcggagcttgtgcttgttcatcttgcgcttc 26151763

                                         
Query: 522      cgcttcttcttgacgctgtccgccc 546
                ||||||||||| |||||||||||||
Sbjct: 26151762 cgcttcttcttcacgctgtccgccc 26151738
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>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence,
            complete sequence
          Length = 139187

 Score =  137 bits (69), Expect = 4e-29
 Identities = 81/85 (95%)
 Strand = Plus / Plus

                                                                        
Query: 462  gtctggcggcggaggcgcttccggagcttgcgcagcttgtgcttgttcatcttgcgtttc 521
            ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 4728 gtctggcggcggaggcgcttccgtagcttgcggagcttgtgcttgttcatcttgcgcttc 4787

                                     
Query: 522  cgcttcttcttgacgctgtccgccc 546
            ||||||||||| |||||||||||||
Sbjct: 4788 cgcttcttcttcacgctgtccgccc 4812
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 4e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                            
Query: 462      gtctggcggcggaggcgcttccggagcttgcgcagcttgtgcttgttcatcttgcgtttc 521
                ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 26243131 gtctggcggcggaggcgcttccgtagcttgcggagcttgtgcttgttcatcttgcgcttc 26243072

                                         
Query: 522      cgcttcttcttgacgctgtccgccc 546
                ||||||||||| |||||||||||||
Sbjct: 26243071 cgcttcttcttcacgctgtccgccc 26243047
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>dbj|AK064735.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C07, full
           insert sequence
          Length = 661

 Score =  137 bits (69), Expect = 4e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                       
Query: 462 gtctggcggcggaggcgcttccggagcttgcgcagcttgtgcttgttcatcttgcgtttc 521
           ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 397 gtctggcggcggaggcgcttccgtagcttgcggagcttgtgcttgttcatcttgcgcttc 338

                                    
Query: 522 cgcttcttcttgacgctgtccgccc 546
           ||||||||||| |||||||||||||
Sbjct: 337 cgcttcttcttcacgctgtccgccc 313
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>dbj|AK063641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G09, full
           insert sequence
          Length = 749

 Score =  137 bits (69), Expect = 4e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                       
Query: 462 gtctggcggcggaggcgcttccggagcttgcgcagcttgtgcttgttcatcttgcgtttc 521
           ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 395 gtctggcggcggaggcgcttccgtagcttgcggagcttgtgcttgttcatcttgcgcttc 336

                                    
Query: 522 cgcttcttcttgacgctgtccgccc 546
           ||||||||||| |||||||||||||
Sbjct: 335 cgcttcttcttcacgctgtccgccc 311
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 43      ttgaaagctggtaactattcgt 64
               ||||||||||||||||||||||
Sbjct: 4090218 ttgaaagctggtaactattcgt 4090239
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>emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             4/6
          Length = 282183

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 337   ctcctataaccaaaccaaaat 357
             |||||||||||||||||||||
Sbjct: 86124 ctcctataaccaaaccaaaat 86144
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 433     gccgggatccaggcgcggcggcggc 457
               |||||||||||||||| ||||||||
Sbjct: 2804401 gccgggatccaggcgctgcggcggc 2804425
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>gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complete sequence
          Length = 162214

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 349    aaccaaaataacaggaggaaa 369
              |||||||||||||||||||||
Sbjct: 146950 aaccaaaataacaggaggaaa 146970
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      aaatgctaaatttgaaagct 51
               ||||||||||||||||||||
Sbjct: 1697916 aaatgctaaatttgaaagct 1697935
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>gb|AC069309.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-154D15, complete
              sequence
          Length = 174754

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    ccagtgtggcagcagcactg 403
              ||||||||||||||||||||
Sbjct: 118617 ccagtgtggcagcagcactg 118598
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>gb|AC161121.3| Pan troglodytes BAC clone CH251-720M8 from chromosome 7, complete
             sequence
          Length = 183573

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aatgagttagaccagcattt 217
             ||||||||||||||||||||
Sbjct: 67411 aatgagttagaccagcattt 67392
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>gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complete sequence
          Length = 129727

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aatgagttagaccagcattt 217
             ||||||||||||||||||||
Sbjct: 74177 aatgagttagaccagcattt 74158
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>gb|AY232099.1| Drosophila yakuba clone yak-ad_CG11876 mRNA sequence
          Length = 597

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 agcttgtgcttgttcatcttgcgt 518
           ||||||||||| ||||||||||||
Sbjct: 581 agcttgtgcttcttcatcttgcgt 558
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>emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 in linkage group 21,
             complete sequence
          Length = 110730

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   gcttgtgcttgttcatcttg 515
             ||||||||||||||||||||
Sbjct: 70199 gcttgtgcttgttcatcttg 70180
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>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23,
              complete sequence
          Length = 190837

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     gggaatatatcatacacaaa 107
              ||||||||||||||||||||
Sbjct: 182644 gggaatatatcatacacaaa 182625
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>emb|AL441989.13| Human DNA sequence from clone RP11-360A18 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 105068

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   ccaggcgcggcggcggctca 460
             ||||||||||||||||||||
Sbjct: 98799 ccaggcgcggcggcggctca 98818
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>ref|XM_964957.1| PREDICTED: Tribolium castaneum similar to CG2083-PA (LOC658580), mRNA
          Length = 3903

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  cgtttccgcttcttcttgac 535
            ||||||||||||||||||||
Sbjct: 1181 cgtttccgcttcttcttgac 1162
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>gb|AC117459.6| Homo sapiens 3 BAC RP11-343L17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153618

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    aaccagccaaggaagcaaaa 85
             ||||||||||||||||||||
Sbjct: 63029 aaccagccaaggaagcaaaa 63048
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    aggcgcggcggcggctcagg 462
              ||||||||||||||||||||
Sbjct: 226441 aggcgcggcggcggctcagg 226422
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    aggcgcggcggcggctcagg 462
              ||||||||||||||||||||
Sbjct: 138911 aggcgcggcggcggctcagg 138892
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   aggcgcggcggcggctcagg 462
             ||||||||||||||||||||
Sbjct: 86103 aggcgcggcggcggctcagg 86122
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>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             6/6
          Length = 155932

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    aaatgctaaatttgaaagct 51
             ||||||||||||||||||||
Sbjct: 71190 aaatgctaaatttgaaagct 71209
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>emb|AJ312124.1|EAC312124 Eubacterium acidaminophilum ORF1 (partial), ORF2, ORF3, uvrC, hprK,
            hymA, hymb, hymC, hymD, fdhB-I, fdhA-I, mog, mobA and
            fdhD genes
          Length = 16133

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 259  tcctggctccttgtcattacagtg 282
            |||||||| |||||||||||||||
Sbjct: 1238 tcctggcttcttgtcattacagtg 1215
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>emb|AJ243297.1|HSA243297 Homo sapiens partial RET gene, exons 2 to 20
          Length = 30430

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   cagcccattcctggctcctt 270
             ||||||||||||||||||||
Sbjct: 25966 cagcccattcctggctcctt 25947
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>emb|CR853303.6| Pig DNA sequence from clone PigE-173F2, complete sequence
          Length = 151259

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tggggaaagaacagtacaaa 199
             ||||||||||||||||||||
Sbjct: 56972 tggggaaagaacagtacaaa 56991
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>gb|AC008646.7| Homo sapiens chromosome 5 clone CTB-182O9, complete sequence
          Length = 174928

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 215   tttgaagctttatttgccagaaat 238
             |||||||||||||||| |||||||
Sbjct: 54987 tttgaagctttatttggcagaaat 55010
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>gb|AE005738.1| Caulobacter crescentus CB15 section 64 of 359 of the complete genome
          Length = 10037

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 444  ggcgcggcggcggctcaggt 463
            ||||||||||||||||||||
Sbjct: 4645 ggcgcggcggcggctcaggt 4664
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>gb|AC124971.15| Medicago truncatula clone mth2-22h8, complete sequence
          Length = 122754

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  catttgaagctttatttgcc 232
            ||||||||||||||||||||
Sbjct: 8280 catttgaagctttatttgcc 8261
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>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    cagcccattcctggctcctt 270
              ||||||||||||||||||||
Sbjct: 123723 cagcccattcctggctcctt 123704
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>gb|AC008415.6| Homo sapiens chromosome 5 clone CTC-283O18, complete sequence
          Length = 168368

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 215    tttgaagctttatttgccagaaat 238
              |||||||||||||||| |||||||
Sbjct: 139056 tttgaagctttatttggcagaaat 139079
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>gb|AC151582.3| Pan troglodytes BAC clone RP43-3F18 from chromosome 7, complete
             sequence
          Length = 197992

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   aatgagttagaccagcattt 217
             ||||||||||||||||||||
Sbjct: 58122 aatgagttagaccagcattt 58141
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>emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chromosome 2, complete
             sequence
          Length = 121977

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   attacagtgtttgaaggtac 293
             ||||||||||||||||||||
Sbjct: 42109 attacagtgtttgaaggtac 42090
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>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2
          Length = 83478

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 352   caaaataacaggaggaaaccatca 375
             |||||||||| |||||||||||||
Sbjct: 63548 caaaataacaagaggaaaccatca 63525
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>gb|AC005993.2|AC005993 Homo sapiens PAC clone RP6-114E22 from 14, complete sequence
          Length = 143943

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 188    gaacagtacaaatgagttagacca 211
              |||||||||||||||| |||||||
Sbjct: 113067 gaacagtacaaatgagatagacca 113090
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>emb|AL391749.4|CNS06C8I Human chromosome 14 DNA sequence BAC R-233L14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195007

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   gaacagtacaaatgagttagacca 211
             |||||||||||||||| |||||||
Sbjct: 78188 gaacagtacaaatgagatagacca 78211
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 495    agcttgtgcttgttcatctt 514
              ||||||||||||||||||||
Sbjct: 275563 agcttgtgcttgttcatctt 275544
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>emb|AL845449.4| Mouse DNA sequence from clone RP23-211M20 on chromosome 2, complete
             sequence
          Length = 226324

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aatgctaaatttgaaagctg 52
             ||||||||||||||||||||
Sbjct: 65119 aatgctaaatttgaaagctg 65138
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>emb|AL928564.8| Mouse DNA sequence from clone RP23-255J22 on chromosome 2, complete
              sequence
          Length = 223337

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tgcaactcatgaactattta 132
              ||||||||||||||||||||
Sbjct: 159052 tgcaactcatgaactattta 159033
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>emb|AL713968.9| Mouse DNA sequence from clone RP23-387L21 on chromosome X, complete
            sequence
          Length = 100240

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 352  caaaataacaggaggaaaccatca 375
            ||||||||||||| ||||||||||
Sbjct: 8560 caaaataacaggaagaaaccatca 8583


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,906,827
Number of Sequences: 3902068
Number of extensions: 5906827
Number of successful extensions: 118612
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118297
Number of HSP's gapped (non-prelim): 315
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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