>GANAB_PIG (P79403) Neutral alpha-glucosidase AB precursor (EC 3.2.1.84)|
            (Glucosidase II alpha subunit)
          Length = 944

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
 Frame = -1

Query: 673  GKSYDYQQG-AFIHRRFVFADNKLTSINIAPDSLTKKVYSTECVIERIIVLGLPSGAKKA 497
            G +++YQ G  F+ RRF F+ N L S +      +K  + T   IER++++G    A   
Sbjct: 849  GHTFNYQTGHEFLLRRFSFSGNTLVSSSAD----SKGHFETPVWIERVVIIGAGKPATVV 904

Query: 496  IIEPGNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRI 365
            +   G+ E  +     S +   ++    +R+P V V  DW+I +
Sbjct: 905  LQTKGSPESRL-----SFQHDPETSVLILRKPGVNVASDWSIHL 943

>GANAB_HUMAN (Q14697) Neutral alpha-glucosidase AB precursor (EC 3.2.1.84)|
            (Glucosidase II alpha subunit)
          Length = 944

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
 Frame = -1

Query: 673  GKSYDYQ-QGAFIHRRFVFADNKLTSINIAPDSLTKKVYSTECVIERIIVLGLPSGAKKA 497
            G +++YQ +  F+ RRF F+ N L S +  P+      + T   IER++++G    A   
Sbjct: 849  GHTFNYQTRQEFLLRRFSFSGNTLVSSSADPEGH----FETPIWIERVVIIGAGKPAAVV 904

Query: 496  IIEPGNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRI 365
            +   G+ E  +     S +   ++    +R+P + V  DW+I +
Sbjct: 905  LQTKGSPESRL-----SFQHDPETSVLVLRKPGINVASDWSIHL 943

>GANC_MACFA (Q9BE70) Neutral alpha-glucosidase C (EC 3.2.1.-) (Fragment)|
          Length = 769

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = -1

Query: 673 GKSYDY-QQGAFIHRRFVFADNKLTSINIAPDSLTKKVYSTECVIERIIVLGLPSGAKKA 497
           G S+ Y  Q  F+HR+F F  + L  IN + D   +  Y ++CV+E+I+VLGL       
Sbjct: 673 GHSFQYLHQKQFLHRKFSFCSSVL--INSSADQ--RGHYPSKCVVEQILVLGLRKEPSFV 728

Query: 496 IIEPGNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRI 365
                + + +    P++    +K+ + ++ + ++ +  DW +RI
Sbjct: 729 TTHSSDGKDQ----PVAFTYCAKTSSLSLEKLSLNIATDWEVRI 768

>GANC_MOUSE (Q8BVW0) Neutral alpha-glucosidase C (EC 3.2.1.-)|
          Length = 898

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = -1

Query: 673  GKSYDY-QQGAFIHRRFVFADNKLTSINIAPDSLTKKVYSTECVIERIIVLGLPSGAKKA 497
            G S+ Y  Q  F++R+F+F  + LT+      +  K  Y ++C++E+I+VLGL       
Sbjct: 802  GHSFQYLHQNQFLYRKFLFCSSVLTN----RCANEKGHYPSKCIVEQILVLGLKKKPSSV 857

Query: 496  IIEPGNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRI 365
                 +   +    P +    +++ A  + + ++R+ +DW +R+
Sbjct: 858  TTHLSDGRAQ----PAAFTYCAETSALRLEKLSLRIGEDWEVRV 897

>GANC_HUMAN (Q8TET4) Neutral alpha-glucosidase C (EC 3.2.1.20)|
          Length = 914

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
 Frame = -1

Query: 673  GKSYDY-QQGAFIHRRFVFADNKLTSINIAPDSLTKKVYSTECVIERIIVLGLPSGAKKA 497
            G S+ Y  Q  F+HR+F F  + L  IN   D   +  Y ++CV+E+I+VLG        
Sbjct: 818  GHSFQYLHQKQFLHRKFSFCSSVL--INSFADQ--RGHYPSKCVVEKILVLGFRKEPSSV 873

Query: 496  IIEPGNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRI 365
                 + + +    P++    +K+   ++ + ++ +  DW +RI
Sbjct: 874  TTHSSDGKDQ----PVAFTYCAKTSILSLEKLSLNIATDWEVRI 913

>GANAB_MOUSE (Q8BHN3) Neutral alpha-glucosidase AB precursor (EC 3.2.1.84)|
            (Glucosidase II alpha subunit) (Alpha glucosidase 2)
          Length = 944

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = -1

Query: 673  GKSYDYQ-QGAFIHRRFVFADNKLTSINIAPDSLTKKVYSTECVIERIIVLGLPSGAKKA 497
            G +++YQ +  F+ RRF F+ + L S +  P    K    T   IER++++G    A   
Sbjct: 849  GHTFNYQTRHEFLLRRFSFSGSTLVSSSADP----KGHLETPIWIERVVIMGAGKPAAVV 904

Query: 496  IIEPGNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRI 365
            +   G+ E  +     S +   ++    +R+P V V  DW+I +
Sbjct: 905  LQTKGSPESRL-----SFQHDPETSVLILRKPGVSVASDWSIHL 943

>AROB_RHOS4 (Q3J2J0) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 370

 Score = 33.1 bits (74), Expect = 0.78
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -1

Query: 493 IEPGNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRIA*YAAHSHLEP 332
           +E G +  E+ +GP  +      +AP +RRP V ++ D T+      A  HL+P
Sbjct: 8   VELGARAYEVRIGPGLIARAGAEIAPLLRRPKVAILTDETV------AGLHLDP 55

>CSMD1_HUMAN (Q96PZ7) CUB and sushi domain-containing protein 1 precursor (CUB and|
            sushi multiple domains protein 1)
          Length = 3565

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
 Frame = +1

Query: 13   SSTILSKNYPDYKKNILNCSVTRTSYH------IHHTWHTNFS 123
            S T+LS  +PD+  N LNC+ T    H      I HT+H   S
Sbjct: 939  SGTVLSPGFPDFYPNSLNCTWTIEVSHGKGVQMIFHTFHLESS 981

>YB79_YEAST (P38138) Putative family 31 glucosidase in FAT2-PBP2 intergenic|
            region (EC 3.2.1.-)
          Length = 954

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 16/52 (30%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
 Frame = -1

Query: 673  GKSYDYQQGAFIHRRFVFADNKLTSI-NIAPDSLTKKVYST--ECVIERIIV 527
            G+++ YQ+G ++  +F+F +N L ++ +  P++LT   ++T     IE+II+
Sbjct: 848  GETFGYQRGEYVETQFIFENNTLKNVRSHIPENLTGIHHNTLRNTNIEKIII 899

>SYS_LEGPL (Q5WZ31) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +1

Query: 238 EIWVPTENIYEAETTLLALPKFMA*REQ*RHQAPGVNGLHIMRSLSSNHL 387
           E+W+P++N Y   ++   +  F A R + R + P  N + ++ +L+ + L
Sbjct: 338 EVWLPSQNTYREISSCSNMEAFQARRMKARFRNPDTNEIQLVHTLNGSGL 387

>SYS_LEGPH (Q5ZY59) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +1

Query: 238 EIWVPTENIYEAETTLLALPKFMA*REQ*RHQAPGVNGLHIMRSLSSNHL 387
           E+W+P++N Y   ++   +  F A R + R + P  N + ++ +L+ + L
Sbjct: 338 EVWLPSQNTYREISSCSNMEAFQARRMKARFRNPDTNEIQLVHTLNGSGL 387

>SYS_LEGPA (Q5X7N0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +1

Query: 238 EIWVPTENIYEAETTLLALPKFMA*REQ*RHQAPGVNGLHIMRSLSSNHL 387
           E+W+P++N Y   ++   +  F A R + R + P  N + ++ +L+ + L
Sbjct: 338 EVWLPSQNTYREISSCSNMEAFQARRMKARFRNPDTNEIQLVHTLNGSGL 387

>SYL_CAMJR (Q5HU13) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 809

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 15  IYNLKQELSRLQKKYSKLQCHKNFISHTSYLAHKFQYKSY--RYTSAINVSHLCQNWKYK 188
           +  LKQE    ++KY++L+ ++            F + +       A+N   LC+N   +
Sbjct: 645 LVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALCKNEALE 704

Query: 189 QHAYQIHAEILRP 227
           Q A+ I   IL P
Sbjct: 705 QEAFYIILNILEP 717

>SYL_CAMJE (Q9PNK3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 809

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 15  IYNLKQELSRLQKKYSKLQCHKNFISHTSYLAHKFQYKSY--RYTSAINVSHLCQNWKYK 188
           +  LKQE    ++KY++L+ ++            F + +       A+N   LC+N   +
Sbjct: 645 LVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALCKNEALE 704

Query: 189 QHAYQIHAEILRP 227
           Q A+ I   IL P
Sbjct: 705 QEAFYIILNILEP 717

>AROB_RHORT (Q2RMW0) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 385

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -1

Query: 484 GNQEVEIDLGPISLRSGSKSVAPTVRRPNVRVVDDWTIRIA*YAAHSHLEP 332
           G +   I +GP  L      +AP +R+P V VV D T+      A  HL+P
Sbjct: 25  GERSYPIHIGPGLLGRAGALIAPLLRKPRVFVVTDATV------AALHLDP 69

>SYS_GLOVI (Q7NMP9) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 429

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 238 EIWVPTENIYEAETTLLALPKFMA*REQ*RHQAPGVNGLHIMRSLSSNHL 387
           E+W+P++N Y   ++      F A R   R +AP   G   + +L+ + L
Sbjct: 343 EVWLPSQNRYREISSCSNFEDFQARRANLRFKAPDKKGTEFVHTLNGSGL 392

>CSMD2_HUMAN (Q7Z408) CUB and sushi domain-containing protein 2 (CUB and sushi|
            multiple domains protein 2)
          Length = 3487

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +1

Query: 13   SSTILSKNYPDYKKNILNCS-VTRTSY--HIHHTWHT 114
            S TILS  +PD+  N LNC+ +  TS+   +  T+HT
Sbjct: 932  SGTILSPGFPDFYPNNLNCTWIIETSHGKGVFFTFHT 968

>MDHM_FRAAN (P83373) Malate dehydrogenase, mitochondrial precursor (EC|
           1.1.1.37)
          Length = 339

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -1

Query: 625 VFADNKLTSINIAPDSLTKKVYSTECVIERIIVLGLPSGAKKAIIEPGNQEVEIDLGPIS 446
           +FAD  L  +N  PD +       EC   +  +  LP  A K  +     E  +DLGP+S
Sbjct: 259 LFADACLXGLNGVPDVV-------ECSYVQSSITELPFFASKVRLGKNGVEEVLDLGPLS 311

Query: 445 --LRSGSKSVAPTVR 407
              + G K + P ++
Sbjct: 312 DFEKEGLKQLKPELK 326


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,993,374
Number of Sequences: 219361
Number of extensions: 2128426
Number of successful extensions: 5535
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5531
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)