ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33p19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197728.1| Oryza sativa (japonica cultivar-group) putative... 54 6e-04
2dbj|AK065705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
3dbj|AK064149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
4gb|AF465512.1| Human coxsackievirus A15 strain G-9, complete genome 44 0.61
5gb|AF499638.1| Human coxsackievirus A15 strain G9, complete genome 44 0.61
6ref|NM_129174.2| Arabidopsis thaliana structural constituent of ... 42 2.4
7gb|AC161119.3| Mus musculus BAC clone RP23-32J13 from chromosome... 42 2.4
8gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, com... 42 2.4
9emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on ch... 42 2.4
10emb|AL158065.7| Human DNA sequence from clone RP11-64I8 on chrom... 42 2.4
11gb|AC007135.8| Arabidopsis thaliana chromosome 2 clone F9C22 map... 42 2.4
12gb|AY088120.1| Arabidopsis thaliana clone 41471 mRNA, complete s... 42 2.4
13emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1... 42 2.4
14gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, comp... 42 2.4
15emb|BX005265.6| Zebrafish DNA sequence from clone CH211-254O16 i... 42 2.4
16emb|AL929337.9| Zebrafish DNA sequence from clone CH211-138N21 i... 42 2.4
17gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, compl... 40 9.5
18ref|XM_637787.1| Dictyostelium discoideum hypothetical protein (... 40 9.5
19gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome... 40 9.5
20gb|AC125192.3| Mus musculus BAC clone RP23-266B4 from chromosome... 40 9.5
21gb|AC162893.6| Mus musculus chromosome 7, clone RP23-419K14, com... 40 9.5
22gb|AC115581.3| Dictyostelium discoideum chromosome 2 map complem... 40 9.5
23gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosom... 40 9.5
24ref|XM_387684.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 9.5
25gb|AC117186.3| Mus musculus BAC clone RP23-37O6 from 1, complete... 40 9.5
26gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, comp... 40 9.5
27gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, compl... 40 9.5
28emb|AL360267.10| Human DNA sequence from clone RP11-342C20 on ch... 40 9.5
29emb|BX119321.4| Human DNA sequence from clone RP5-908D6 on chrom... 40 9.5
30emb|AL450244.11| Human DNA sequence from clone RP11-152M20 on ch... 40 9.5
31gb|AC098689.2| Homo sapiens chromosome 1 clone RP11-56N17, compl... 40 9.5
32emb|AL035698.12|HS69B13 Human DNA sequence from clone RP1-69B13 ... 40 9.5
33emb|AL078459.8|HSA123M24 Human DNA sequence from clone RP4-621F1... 40 9.5
34emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 40 9.5
35emb|AL023777.1|SPCC1827 S.pombe chromosome III cosmid c1827 40 9.5
36emb|AJ851418.1| Gallus gallus mRNA for hypothetical protein, clo... 40 9.5
37gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Canc... 40 9.5
38emb|CR759946.5| Zebrafish DNA sequence from clone DKEY-79C1 in l... 40 9.5
39ref|NM_205459.1| Gallus gallus myosin, light polypeptide kinase ... 40 9.5
40emb|X52876.1|GGFMYLCK G.gallus mRNA for fibroblast myosin light ... 40 9.5
41gb|AC025627.13| Homo sapiens chromosome 17, clone RP11-1113L8, c... 40 9.5
42ref|NM_080169.2| Drosophila melanogaster Ecdysone-inducible gene... 40 9.5
43gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, co... 40 9.5
44gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, com... 40 9.5
45gb|AY061140.1| Drosophila melanogaster LD11958 full length cDNA 40 9.5
46emb|BX950237.2| Gallus gallus finished cDNA, clone ChEST704b4 40 9.5
47emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 i... 40 9.5
48ref|NM_069973.2| Caenorhabditis elegans F08G5.6 (F08G5.6) mRNA, ... 40 9.5
49gb|AC022088.5|AC022088 Homo sapiens chromosome 5 clone CTB-110D2... 40 9.5
50gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, r... 40 9.5
51gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Canc... 40 9.5
52emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on ch... 40 9.5
53emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in... 40 9.5
54emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 i... 40 9.5
55emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in ... 40 9.5
56emb|Z22872.1|GMLEAPROA G.max Lea protein mRNA, complete CDS 40 9.5
57gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete sequence 40 9.5
58gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15... 40 9.5
59gb|AC122516.4| Mus musculus BAC clone RP24-458M4 from chromosome... 40 9.5
60dbj|AP000795.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.5
61emb|AL929516.15| Zebrafish DNA sequence from clone CH211-10C20 i... 40 9.5
62gb|AF045256.1|GGMLCK02 Gallus gallus smooth muscle/non-muscle my... 40 9.5
63gb|AC140214.3| Mus musculus BAC clone RP23-479G14 from 1, comple... 40 9.5
64gb|AC145565.4| Mus musculus BAC clone RP24-485M14 from 3, comple... 40 9.5
65emb|AL672298.4| Mouse DNA sequence from clone RP23-456D8 on chro... 40 9.5
66emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on ch... 40 9.5
67emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chro... 40 9.5 
>ref|NM_197728.1| Oryza sativa (japonica cultivar-group) putative ethylene-forming
           enzyme (OSJNBa0042H09.21), mRNA
          Length = 1044

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 431 ctgtgctcaatgctttggtactttccatttgtcaatatctcaagaaagtcaccaacatt 489
           ||||||||||| || | |||||| |||||||| |  |||||||||| ||||||||||||
Sbjct: 830 ctgtgctcaatactcttgtacttgccatttgtgaggatctcaagaatgtcaccaacatt 772
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>dbj|AK065705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035F20, full
            insert sequence
          Length = 2682

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 431  ctgtgctcaatgctttggtactttccatttgtcaatatctcaagaaagtcaccaacatt 489
            ||||||||||| || | |||||| |||||||| |  |||||||||| ||||||||||||
Sbjct: 2206 ctgtgctcaatactcttgtacttgccatttgtgaggatctcaagaatgtcaccaacatt 2148
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>dbj|AK064149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D01, full
            insert sequence
          Length = 2446

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 431  ctgtgctcaatgctttggtactttccatttgtcaatatctcaagaaagtcaccaacatt 489
            ||||||||||| || | |||||| |||||||| |  |||||||||| ||||||||||||
Sbjct: 2060 ctgtgctcaatactcttgtacttgccatttgtgaggatctcaagaatgtcaccaacatt 2002
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>gb|AF465512.1| Human coxsackievirus A15 strain G-9, complete genome
          Length = 7441

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 127  accaaagtggagcagggcaaat 148
            ||||||||||||||||||||||
Sbjct: 6483 accaaagtggagcagggcaaat 6504
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>gb|AF499638.1| Human coxsackievirus A15 strain G9, complete genome
          Length = 7441

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 127  accaaagtggagcagggcaaat 148
            ||||||||||||||||||||||
Sbjct: 6483 accaaagtggagcagggcaaat 6504
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>ref|NM_129174.2| Arabidopsis thaliana structural constituent of ribosome AT2G36160
           mRNA, complete cds
          Length = 750

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   aacatttttctactttgatat 21
           |||||||||||||||||||||
Sbjct: 684 aacatttttctactttgatat 704
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>gb|AC161119.3| Mus musculus BAC clone RP23-32J13 from chromosome 18, complete sequence
          Length = 218697

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    gtcttgtatttcttgagccct 331
              |||||||||||||||||||||
Sbjct: 174134 gtcttgtatttcttgagccct 174154
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>gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, complete sequence
          Length = 176364

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 373   ctttgggaggtgaaaagcaga 393
             |||||||||||||||||||||
Sbjct: 40233 ctttgggaggtgaaaagcaga 40253
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>emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on chromosome 13 Contains a
             novel pseudogene, complete sequence
          Length = 176797

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     catttttctactttgatattt 23
             |||||||||||||||||||||
Sbjct: 37089 catttttctactttgatattt 37109
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>emb|AL158065.7| Human DNA sequence from clone RP11-64I8 on chromosome 13, complete
             sequence
          Length = 68301

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 459   ttgtcaatatctcaagaaagt 479
             |||||||||||||||||||||
Sbjct: 47821 ttgtcaatatctcaagaaagt 47801
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>gb|AC007135.8| Arabidopsis thaliana chromosome 2 clone F9C22 map g6825, complete
             sequence
          Length = 31733

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     aacatttttctactttgatat 21
             |||||||||||||||||||||
Sbjct: 21677 aacatttttctactttgatat 21697
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>gb|AY088120.1| Arabidopsis thaliana clone 41471 mRNA, complete sequence
          Length = 716

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   aacatttttctactttgatat 21
           |||||||||||||||||||||
Sbjct: 684 aacatttttctactttgatat 704
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>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE
          Length = 122965

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     acatttttctactttgatatt 22
             |||||||||||||||||||||
Sbjct: 79242 acatttttctactttgatatt 79262
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>gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, complete sequence
          Length = 216783

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   gtcttgtatttcttgagccct 331
             |||||||||||||||||||||
Sbjct: 53047 gtcttgtatttcttgagccct 53067
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>emb|BX005265.6| Zebrafish DNA sequence from clone CH211-254O16 in linkage group 5,
              complete sequence
          Length = 162599

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    tgattaattaaccatgaccaa 131
              |||||||||||||||||||||
Sbjct: 146792 tgattaattaaccatgaccaa 146812
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>emb|AL929337.9| Zebrafish DNA sequence from clone CH211-138N21 in linkage group 5,
            complete sequence
          Length = 176736

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 111  tgattaattaaccatgaccaa 131
            |||||||||||||||||||||
Sbjct: 4955 tgattaattaaccatgaccaa 4935
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>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 384   gaaaagcagaaatggacatcctct 407
             |||||||||||| |||||||||||
Sbjct: 51873 gaaaagcagaaaaggacatcctct 51850
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>ref|XM_637787.1| Dictyostelium discoideum hypothetical protein (DDB0217877), partial
            mRNA
          Length = 2187

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    tttttctactttgatattta 24
            ||||||||||||||||||||
Sbjct: 1516 tttttctactttgatattta 1497
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>gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome 3, complete sequence
          Length = 208348

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      atttttctactttgatattt 23
              ||||||||||||||||||||
Sbjct: 195564 atttttctactttgatattt 195545
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>gb|AC125192.3| Mus musculus BAC clone RP23-266B4 from chromosome 8, complete sequence
          Length = 199459

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   atcctctccttgtgaggatt 420
             ||||||||||||||||||||
Sbjct: 60425 atcctctccttgtgaggatt 60444
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>gb|AC162893.6| Mus musculus chromosome 7, clone RP23-419K14, complete sequence
          Length = 197052

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   caacctcgtccaccctcagg 310
             ||||||||||||||||||||
Sbjct: 62706 caacctcgtccaccctcagg 62687
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>gb|AC115581.3| Dictyostelium discoideum chromosome 2 map complement(3527391-3470188)
             strain AX4, complete sequence
          Length = 57203

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tttttctactttgatattta 24
             ||||||||||||||||||||
Sbjct: 49750 tttttctactttgatattta 49769
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>gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosome 9, complete sequence
          Length = 163348

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 384   gaaaagcagaaatggacatcctct 407
             |||||||||||| |||||||||||
Sbjct: 16974 gaaaagcagaaaaggacatcctct 16997
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>ref|XM_387684.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07508.1)
            partial mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  atcttgtctcttgatctgga 551
            ||||||||||||||||||||
Sbjct: 1034 atcttgtctcttgatctgga 1015
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>gb|AC117186.3| Mus musculus BAC clone RP23-37O6 from 1, complete sequence
          Length = 172780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   catagtccttggttttcttc 259
             ||||||||||||||||||||
Sbjct: 13262 catagtccttggttttcttc 13243
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>gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, complete sequence
          Length = 149157

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   catagtccttggttttcttc 259
             ||||||||||||||||||||
Sbjct: 25809 catagtccttggttttcttc 25790
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>gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, complete sequence
          Length = 108051

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 601   ggaatgtggtgaaatcccca 620
             ||||||||||||||||||||
Sbjct: 50525 ggaatgtggtgaaatcccca 50544
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>emb|AL360267.10| Human DNA sequence from clone RP11-342C20 on chromosome 13 Contains a
              RNA-binding protein LIN-28 pseudogene, a novel gene and the
              3' end of a novel gene, complete sequence
          Length = 157381

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      tttctactttgatatttatt 26
              ||||||||||||||||||||
Sbjct: 151763 tttctactttgatatttatt 151744
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>emb|BX119321.4| Human DNA sequence from clone RP5-908D6 on chromosome 1 Contains the 5'
             end of a novel pseudogene and a guanylate binding protein
             pseudogene, complete sequence
          Length = 68235

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   catttgtcaatatctcaaga 475
             ||||||||||||||||||||
Sbjct: 24415 catttgtcaatatctcaaga 24434
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>emb|AL450244.11| Human DNA sequence from clone RP11-152M20 on chromosome 1, complete
             sequence
          Length = 85101

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tttctactttgatatttatt 26
             ||||||||||||||||||||
Sbjct: 49130 tttctactttgatatttatt 49111



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tttctactttgatatttatt 26
             ||||||||||||||||||||
Sbjct: 47810 tttctactttgatatttatt 47791
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>gb|AC098689.2| Homo sapiens chromosome 1 clone RP11-56N17, complete sequence
          Length = 4001

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 427  gaccctgtgctcaatgcttt 446
            ||||||||||||||||||||
Sbjct: 1521 gaccctgtgctcaatgcttt 1540
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>emb|AL035698.12|HS69B13 Human DNA sequence from clone RP1-69B13 on chromosome 6q24.1-25.2
             Contains the 3' end of the GRM1 gene for metabotropic
             glutamate receptor 1, a phosphoribosyl pyrophosphate
             synthetase (PRPS1, PRPS2) pseudogene and a CpG island,
             complete sequence
          Length = 200317

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tttctactttgatatttatt 26
             ||||||||||||||||||||
Sbjct: 66943 tttctactttgatatttatt 66962
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>emb|AL078459.8|HSA123M24 Human DNA sequence from clone RP4-621F18 on chromosome 1p11.4-21.3
             Contains part of a novel gene, and the 3' end of the DDAH1
             gene for dimethylarginine dimethylaminohydrolase 1,
             complete sequence
          Length = 83946

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   gaccctgtgctcaatgcttt 446
             ||||||||||||||||||||
Sbjct: 83246 gaccctgtgctcaatgcttt 83265
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>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1
          Length = 347582

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      tttttctactttgatattta 24
              ||||||||||||||||||||
Sbjct: 278153 tttttctactttgatattta 278172
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>emb|AL023777.1|SPCC1827 S.pombe chromosome III cosmid c1827
          Length = 17600

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 439  aatgctttggtactttccatttgtcaat 466
            ||||||| | ||||||||||||||||||
Sbjct: 8069 aatgcttcgatactttccatttgtcaat 8096
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>emb|AJ851418.1| Gallus gallus mRNA for hypothetical protein, clone 2g1
          Length = 5146

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 535  ttgtctcttgatctggagcc 554
            ||||||||||||||||||||
Sbjct: 1339 ttgtctcttgatctggagcc 1320
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>gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51070

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   aaagcagaaatggacatcct 405
             ||||||||||||||||||||
Sbjct: 47368 aaagcagaaatggacatcct 47349
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>emb|CR759946.5| Zebrafish DNA sequence from clone DKEY-79C1 in linkage group 5,
             complete sequence
          Length = 60636

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttttctactttgatatttat 25
             ||||||||||||||||||||
Sbjct: 52912 ttttctactttgatatttat 52931
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>ref|NM_205459.1| Gallus gallus myosin, light polypeptide kinase (MYLK), mRNA
          Length = 7639

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 cagaaatggacatcctctcc 409
           ||||||||||||||||||||
Sbjct: 194 cagaaatggacatcctctcc 213
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>emb|X52876.1|GGFMYLCK G.gallus mRNA for fibroblast myosin light chain kinase
          Length = 7631

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 cagaaatggacatcctctcc 409
           ||||||||||||||||||||
Sbjct: 186 cagaaatggacatcctctcc 205
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>gb|AC025627.13| Homo sapiens chromosome 17, clone RP11-1113L8, complete sequence
          Length = 149866

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   catagtccttggttttcttc 259
             ||||||||||||||||||||
Sbjct: 20254 catagtccttggttttcttc 20273
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>ref|NM_080169.2| Drosophila melanogaster Ecdysone-inducible gene E3 CG2723-RA (ImpE3),
            mRNA
          Length = 2236

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 18   atatttattcgagcacatttttta 41
            ||||||||| ||||||||||||||
Sbjct: 2082 atatttatttgagcacatttttta 2105
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>gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, complete sequence
          Length = 158341

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 447   ggtactttccatttgtcaatatct 470
             ||||| ||||||||||||||||||
Sbjct: 32902 ggtacattccatttgtcaatatct 32925
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>gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, complete sequence
          Length = 160671

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 447    ggtactttccatttgtcaatatct 470
              ||||| ||||||||||||||||||
Sbjct: 144709 ggtacattccatttgtcaatatct 144732
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>gb|AY061140.1| Drosophila melanogaster LD11958 full length cDNA
          Length = 2254

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 18   atatttattcgagcacatttttta 41
            ||||||||| ||||||||||||||
Sbjct: 2082 atatttatttgagcacatttttta 2105
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>emb|BX950237.2| Gallus gallus finished cDNA, clone ChEST704b4
          Length = 771

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 cagaaatggacatcctctcc 409
           ||||||||||||||||||||
Sbjct: 219 cagaaatggacatcctctcc 238
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>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15,
              complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    gattaattaaccatgaccaa 131
              ||||||||||||||||||||
Sbjct: 177389 gattaattaaccatgaccaa 177408
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>ref|NM_069973.2| Caenorhabditis elegans F08G5.6 (F08G5.6) mRNA, complete cds
          Length = 1056

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 gaaatggacatcctctcctt 411
           ||||||||||||||||||||
Sbjct: 536 gaaatggacatcctctcctt 517
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>gb|AC022088.5|AC022088 Homo sapiens chromosome 5 clone CTB-110D2, complete sequence
          Length = 108906

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 601    ggaatgtggtgaaatcccca 620
              ||||||||||||||||||||
Sbjct: 106634 ggaatgtggtgaaatcccca 106615
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>gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone
             BACR07M14, complete sequence
          Length = 181950

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    atatttattcgagcacatttttta 41
             ||||||||| ||||||||||||||
Sbjct: 79055 atatttatttgagcacatttttta 79032
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>gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167875

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gaggtgaaaagcagaaatgg 398
              ||||||||||||||||||||
Sbjct: 162600 gaggtgaaaagcagaaatgg 162619
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>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete
              sequence
          Length = 213263

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 385    aaaagcagaaatggacatcctctccttg 412
              |||||||||| ||| |||||||||||||
Sbjct: 206554 aaaagcagaattgggcatcctctccttg 206527
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>emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in linkage group 5,
            complete sequence
          Length = 174866

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    ttttctactttgatatttat 25
            ||||||||||||||||||||
Sbjct: 9258 ttttctactttgatatttat 9277
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>emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 in linkage group 15,
              complete sequence
          Length = 152072

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    gattaattaaccatgaccaa 131
              ||||||||||||||||||||
Sbjct: 103289 gattaattaaccatgaccaa 103270
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>emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in linkage group 15,
             complete sequence
          Length = 154452

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   gattaattaaccatgaccaa 131
             ||||||||||||||||||||
Sbjct: 82719 gattaattaaccatgaccaa 82700
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>emb|Z22872.1|GMLEAPROA G.max Lea protein mRNA, complete CDS
          Length = 1748

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 ggcatagtccttggttttct 257
           ||||||||||||||||||||
Sbjct: 491 ggcatagtccttggttttct 472



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 ggcatagtccttggttttct 257
           ||||||||||||||||||||
Sbjct: 458 ggcatagtccttggttttct 439
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>gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete sequence
          Length = 123805

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 619   caaaaccttatcatgagcca 638
             ||||||||||||||||||||
Sbjct: 51802 caaaaccttatcatgagcca 51783
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>gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15 of 118 of the
             complete sequence
          Length = 228314

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    atatttattcgagcacatttttta 41
             ||||||||| ||||||||||||||
Sbjct: 57450 atatttatttgagcacatttttta 57427
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>gb|AC122516.4| Mus musculus BAC clone RP24-458M4 from chromosome 3, complete sequence
          Length = 162419

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      atttttctactttgatattt 23
              ||||||||||||||||||||
Sbjct: 159651 atttttctactttgatattt 159670
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>dbj|AP000795.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-876F8, complete
             sequence
          Length = 76999

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   aagcagaaatggacatcctc 406
             ||||||||||||||||||||
Sbjct: 44012 aagcagaaatggacatcctc 43993
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>emb|AL929516.15| Zebrafish DNA sequence from clone CH211-10C20 in linkage group 1,
             complete sequence
          Length = 165892

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   gattaattaaccatgaccaa 131
             ||||||||||||||||||||
Sbjct: 89624 gattaattaaccatgaccaa 89643
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>gb|AF045256.1|GGMLCK02 Gallus gallus smooth muscle/non-muscle myosin light chain kinase
           gene, exon 2
          Length = 276

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 cagaaatggacatcctctcc 409
           ||||||||||||||||||||
Sbjct: 70  cagaaatggacatcctctcc 89
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>gb|AC140214.3| Mus musculus BAC clone RP23-479G14 from 1, complete sequence
          Length = 194229

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   catagtccttggttttcttc 259
             ||||||||||||||||||||
Sbjct: 83424 catagtccttggttttcttc 83405
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>gb|AC145565.4| Mus musculus BAC clone RP24-485M14 from 3, complete sequence
          Length = 184423

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      atttttctactttgatattt 23
              ||||||||||||||||||||
Sbjct: 117776 atttttctactttgatattt 117795
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>emb|AL672298.4| Mouse DNA sequence from clone RP23-456D8 on chromosome X, complete
             sequence
          Length = 204050

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   aatttctgctccaagctttt 210
             ||||||||||||||||||||
Sbjct: 12657 aatttctgctccaagctttt 12638
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>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
             sequence
          Length = 201671

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 372   actttgggaggtgaaaagcagaaa 395
             |||||||| |||||||||||||||
Sbjct: 22945 actttgggtggtgaaaagcagaaa 22922
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>emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chromosome 1, complete
             sequence
          Length = 101854

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   catttgtcaatatctcaaga 475
             ||||||||||||||||||||
Sbjct: 85550 catttgtcaatatctcaaga 85531


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,427,804
Number of Sequences: 3902068
Number of extensions: 7427804
Number of successful extensions: 116973
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116847
Number of HSP's gapped (non-prelim): 126
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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