ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33p16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK062254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 454 e-124
2gb|AY739290.1| Zea mays protein disulfide isomerase (PDIL2-3) mR... 440 e-120
3dbj|AK072941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 408 e-110
4gb|AY112452.1| Zea mays CL286_2 mRNA sequence 210 5e-51
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
6dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
7dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
8emb|AJ719135.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-31-53... 64 7e-07
9gb|AC011382.4| Homo sapiens chromosome 5 clone CTB-13H5, complet... 44 0.62
10gb|M99566.1|SYNSCOS sCos cloning vector SfiI containing bacterio... 42 2.5
11gb|M99569.1|SYNPWE15 sCos cloning vector SfiI containing bacteri... 42 2.5
12gb|AC025962.5|AC025962 Homo sapiens chromosome 8, clone RP11-790... 42 2.5
13emb|BX511005.6| Zebrafish DNA sequence from clone DKEY-72N1 in l... 42 2.5
14gb|U00003.1|PIB8 pIB8 cosmid vector; complete sequence 42 2.5
15gb|AY532632.1| Cloning vector pLAFR, complete sequence 42 2.5
16gb|AE004686.1| Pseudomonas aeruginosa PAO1, section 247 of 529 o... 42 2.5
17gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, comp... 42 2.5
18gb|AF184978.1|AF184978 Binary vector pCLD04541, complete sequence 42 2.5
19emb|Z96759.1|HS8QT041 H.sapiens telomeric DNA sequence, clone 8Q... 42 2.5
20gb|L19900.1|SYNSVPHEP Cloning vector cosmid svPHEP DNA sequence ... 42 2.5
21gb|L19899.1|SYNCVPTCF Cloning vector cosmid pTCF DNA sequence en... 42 2.5
22gb|AF136442.1|AF136442 Cloning vector pScosBC1, E. coli-Burkhold... 42 2.5
23gb|AF129504.1|AF129504 Cloning vector pWDYcos1.0.1, complete seq... 42 2.5
24dbj|AB055064.1| Synthetic transposable element dAc-I-RS DNA, com... 42 2.5
25emb|Z12112.1|PWE15A pWE15A cosmid vector DNA 42 2.5
26emb|X94336.1|CVBETLACT Cloning vector beta-lactamase gene 42 2.5
27emb|X98612.1|CVPJB8 Artificial cloning vector pjb8 42 2.5
28emb|X65279.1|PWE15 pWE15 cosmid vector DNA 42 2.5
29gb|AF075573.1|AF075573 Cloning vector pWEB, complete sequence 42 2.5
30gb|L76273.1|SYNHPH Cloning vector pMLF2 hygromycin B phosphotran... 42 2.5
31gb|AC113182.14| Mus musculus chromosome 8, clone RP23-39F24, com... 42 2.5
32gb|U07340.1|U07340 Cosmid vector pTL5, complete sequence 42 2.5
33dbj|AP003697.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.5
34ref|XM_483499.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.7
35gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, c... 40 9.7
36gb|AC113587.16| Mus musculus chromosome 15, clone RP24-424I13, c... 40 9.7
37gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 9.7
38gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.7
39gb|AC158606.14| Mus musculus 10 BAC RP24-456P10 (Roswell Park Ca... 40 9.7
40gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosom... 40 9.7
41ref|XM_953631.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.7
42ref|XM_330307.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.7
43gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, com... 40 9.7
44gb|AC147348.2| Xenopus tropicalis clone CH216-122H9, complete se... 40 9.7
45gb|AC131669.3| Mus musculus BAC clone RP23-307E9 from chromosome... 40 9.7
46gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, c... 40 9.7
47ref|XM_572822.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 9.7
48gb|AC122250.4| Mus musculus BAC clone RP23-167A3 from chromosome... 40 9.7
49emb|AJ224870.1|SCAJ4870 Streptomyces clavuligerus lexA, nrdR & n... 40 9.7
50gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, com... 40 9.7
51gb|AC114407.24| Mus musculus chromosome 10, clone RP23-51G1, com... 40 9.7
52emb|AL096814.26|HSDJ139D8 Human DNA sequence from clone RP1-139D... 40 9.7
53emb|AL035608.11|HS479J7 Human DNA sequence from clone RP3-479J7 ... 40 9.7
54emb|AL772193.5| Zebrafish DNA sequence from clone CH211-194C5 in... 40 9.7
55gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 9.7
56dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 9.7
57gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, comple... 40 9.7
58gb|AC092810.2| Homo sapiens chromosome 1 clone RP11-385M4, compl... 40 9.7
59gb|AC080066.6| Homo sapiens BAC clone CTD-2321M19 from 7, comple... 40 9.7
60dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
61dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
62dbj|AP000388.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.7
63emb|BX470085.6| Zebrafish DNA sequence from clone DKEY-238K17 in... 40 9.7
64dbj|AK119370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
65dbj|AK073978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
66tpe|BN000648.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 9.7
67emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-9... 40 9.7
68gb|AC123724.9| Mus musculus chromosome 15, clone RP23-432N1, com... 40 9.7
69emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 40 9.7
70gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complet... 40 9.7
71emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chr... 40 9.7 
>dbj|AK062254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G06, full
            insert sequence
          Length = 1642

 Score =  454 bits (229), Expect = e-124
 Identities = 455/529 (86%), Gaps = 1/529 (0%)
 Strand = Plus / Minus

                                                                        
Query: 177  agaatcacaactcgtcgttgggcgcagagctgtccgccatgagctcctcgagcgagaact 236
            |||||||||||||||| ||    | |||| |||| ||||| |||||||| || ||||| |
Sbjct: 1429 agaatcacaactcgtcatttactggagagttgtcggccatcagctcctcaagggagaatt 1370

                                                                        
Query: 237  cgtcctcctcgatgacctctccatccttgccgtcccatggttccgactggaccaccgtcg 296
            ||||||| || || ||||| ||||| ||||||||||||||||| || ||||| | ||| |
Sbjct: 1369 cgtcctcttcaataacctcaccatctttgccgtcccatggttcagattggactatcgttg 1310

                                                                        
Query: 297  gggcgccctccagaggaaggttgccctttccgccgcgccctgcctccttcacaaactcgg 356
            |||  || |||| |||||| || ||||| || ||||||||||| ||| |||||||||| |
Sbjct: 1309 gggtaccgtccaaaggaagattacccttcccaccgcgccctgcttccctcacaaactcag 1250

                                                                        
Query: 357  tgatttcggcgagctcgaaggcgctacggagcggagcgtatgcgcctttcttcacgttga 416
            | |||||  | |||| ||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 1249 ttatttcatcaagctggaaagcactacggagtggagcatatgcgccttttttcacgttga 1190

                                                                        
Query: 417  gagcgaccatggctggatagccatagccaccgactccgacctgcttctccagatcagctt 476
            | || ||||| |||||||||||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 1189 gggcaaccatcgctggatagccataaccaccaactccaacttgcttctcaagatcagctt 1130

                                                                        
Query: 477  gcttgccggcgcctgcccagacaaaactgtatggactcttcttaaatttctcagcaacag 536
            |||| || ||  ||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1129 gcttcccagcagctgtccagacaaaactgtatggactctttttaaatttctcagcaacag 1070

                                                                        
Query: 537  atagtagcagctcaaggtacttgtttcttccttctgcctttgagtccaggatgtctggaa 596
            ||| |||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||
Sbjct: 1069 ataatagcagctcaaggtacttgtttcttccttcggcctttgaatccaagatatctggaa 1010

                                                                        
Query: 597  gg-aagacacaaagcaaatggcagcagaagcacacttctcttccatcacatctgcgctag 655
            || |||| |||||||||||||||||||||||||| |||||||||||  | |||| || ||
Sbjct: 1009 ggaaagatacaaagcaaatggcagcagaagcacatttctcttccatggcgtctgggccag 950

                                                             
Query: 656  tcaactcagaaacttcaggtggtgcagcgttcgcttccagctgctccaa 704
            |||||||||||||||||||||| ||||| || ||||||| |||||||||
Sbjct: 949  tcaactcagaaacttcaggtggagcagcattggcttccaactgctccaa 901
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>gb|AY739290.1| Zea mays protein disulfide isomerase (PDIL2-3) mRNA, complete cds
          Length = 1531

 Score =  440 bits (222), Expect = e-120
 Identities = 430/498 (86%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                        
Query: 177  agaatcacaactcgtcgttgggcgcagagctgtccgccatgagctcctcgagcgagaact 236
            ||||||||||||| ||||| |  |  ||||||||  |||||||||| ||||| ||||| |
Sbjct: 1374 agaatcacaactcatcgtttgctgaggagctgtcgcccatgagctcgtcgagggagaatt 1315

                                                                        
Query: 237  cgtcctcctcgatgacctctccatccttgccgtcccatggttccgactggaccaccgtcg 296
            | |||||||| |||||||||||||| ||||||||||| || || |||  ||| || || |
Sbjct: 1314 catcctcctcaatgacctctccatctttgccgtcccacggctcggacgcgactactgtag 1255

                                                                        
Query: 297  gggcgccctccagaggaaggttgccctttccgccgcgccctgcctccttcacaaactcgg 356
            | ||  | | |||||||||||| |||||||| || ||||||||||||||||| |||||| 
Sbjct: 1254 gtgcatcgttcagaggaaggtttccctttccaccacgccctgcctccttcacgaactcga 1195

                                                                        
Query: 357  tgatttcggcgagctcgaaggcgctacggagcggagcgtatgcgcctttcttcacgttga 416
            |||||||| || ||| |||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct: 1194 tgatttcgtcgcgctggaaggcactacggagtggagcgtatgcacctttcttcacgttga 1135

                                                                        
Query: 417  gagcgaccatggctggatagccatagccaccgactccgacctgcttctccagatcagctt 476
            |||| |||||||| |||||||| ||||| || || || ||||| ||||| |||| |||||
Sbjct: 1134 gagctaccatggcgggatagccgtagccgcccacaccaacctggttctcgagattagctt 1075

                                                                        
Query: 477  gcttgccggcgcctgcccagacaaaactgtatggactcttcttaaatttctcagcaacag 536
            ||||||| ||  ||| |||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1074 gcttgccagcagctgtccagacaaaactgtatggactctttttaaacttctcagctacag 1015

                                                                        
Query: 537  atagtagcagctcaaggtacttgtttcttccttctgcctttgagtccaggatgtctggaa 596
            | || || ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1014 agagcaggagctcaaggtacttgtttcttccttctgcctttgaatcaaggatgtctggaa 955

                                                                        
Query: 597  ggaa-gacacaaagcaaatggcagcagaagcacacttctcttccatcacatctgcgctag 655
            |||| || ||||| ||||||||||||||||| |||||||||||||| ||||| | || ||
Sbjct: 954  ggaatgatacaaaacaaatggcagcagaagcgcacttctcttccatgacatccgggccag 895

                              
Query: 656  tcaactcagaaacttcag 673
            ||||||||||||||||||
Sbjct: 894  tcaactcagaaacttcag 877
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>dbj|AK072941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F04, full
            insert sequence
          Length = 1738

 Score =  408 bits (206), Expect = e-110
 Identities = 402/466 (86%), Gaps = 1/466 (0%)
 Strand = Plus / Minus

                                                                        
Query: 177  agaatcacaactcgtcgttgggcgcagagctgtccgccatgagctcctcgagcgagaact 236
            |||||||||||||||| ||    | |||| |||| ||||| |||||||| || ||||| |
Sbjct: 1573 agaatcacaactcgtcatttactggagagttgtcggccatcagctcctcaagggagaatt 1514

                                                                        
Query: 237  cgtcctcctcgatgacctctccatccttgccgtcccatggttccgactggaccaccgtcg 296
            ||||||| || || ||||| ||||| ||||||||||||||||| || ||||| | ||| |
Sbjct: 1513 cgtcctcttcaataacctcaccatctttgccgtcccatggttcagattggactatcgttg 1454

                                                                        
Query: 297  gggcgccctccagaggaaggttgccctttccgccgcgccctgcctccttcacaaactcgg 356
            |||  || |||| |||||| || ||||| || ||||||||||| |||||||||||||| |
Sbjct: 1453 gggtaccgtccaaaggaagattacccttcccaccgcgccctgcttccttcacaaactcag 1394

                                                                        
Query: 357  tgatttcggcgagctcgaaggcgctacggagcggagcgtatgcgcctttcttcacgttga 416
            | |||||  | |||| ||| || |||||||| ||||| ||||||||||| ||||||||| 
Sbjct: 1393 ttatttcatcaagctggaaagcactacggagtggagcatatgcgccttttttcacgttgt 1334

                                                                        
Query: 417  gagcgaccatggctggatagccatagccaccgactccgacctgcttctccagatcagctt 476
            |||| ||||| |||||||||||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 1333 gagcaaccatcgctggatagccataaccaccaactccaacttgcttctcaagatcagctt 1274

                                                                        
Query: 477  gcttgccggcgcctgcccagacaaaactgtatggactcttcttaaatttctcagcaacag 536
            |||| || ||  ||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1273 gcttcccagcagctgtccagacaaaactgtatggactctttttaaatttctcagcaacag 1214

                                                                        
Query: 537  atagtagcagctcaaggtacttgtttcttccttctgcctttgagtccaggatgtctggaa 596
            ||| |||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||
Sbjct: 1213 ataatagcagctcaaggtacttgtttcttccttcggcctttgaatccaagatatctggaa 1154

                                                          
Query: 597  gg-aagacacaaagcaaatggcagcagaagcacacttctcttccat 641
            || |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1153 ggaaagatacaaagcaaatggcagcagaagcacatttctcttccat 1108



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 654  agtcaactcagaaacttcaggtggtgcagcgttcgcttccagctgctccaa 704
            |||||||||||||||||||||||| ||||| || ||||||| |||||||||
Sbjct: 1006 agtcaactcagaaacttcaggtggagcagcattggcttccaactgctccaa 956
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>gb|AY112452.1| Zea mays CL286_2 mRNA sequence
          Length = 1510

 Score =  210 bits (106), Expect = 5e-51
 Identities = 247/294 (84%)
 Strand = Plus / Minus

                                                                        
Query: 177  agaatcacaactcgtcgttgggcgcagagctgtccgccatgagctcctcgagcgagaact 236
            ||||||||||||| ||||| |  |  ||||||||  |||||||||| ||||| ||||| |
Sbjct: 1374 agaatcacaactcatcgtttgctgaggagctgtcgcccatgagctcgtcgagggagaatt 1315

                                                                        
Query: 237  cgtcctcctcgatgacctctccatccttgccgtcccatggttccgactggaccaccgtcg 296
            | |||||||| |||||||||||||| ||||||||||| || || |||  ||| || || |
Sbjct: 1314 catcctcctcaatgacctctccatctttgccgtcccacggctcggacgcgactactgtag 1255

                                                                        
Query: 297  gggcgccctccagaggaaggttgccctttccgccgcgccctgcctccttcacaaactcgg 356
            | ||  | | |||||||||||| |||||||| || ||||||||||||||||| |||||| 
Sbjct: 1254 gtgcatcgttcagaggaaggtttccctttccaccacgccctgcctccttcacgaactcga 1195

                                                                        
Query: 357  tgatttcggcgagctcgaaggcgctacggagcggagcgtatgcgcctttcttcacgttga 416
            |||||||| || ||| |||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct: 1194 tgatttcgtcgcgctggaaggcactacggagtggagcgtatgcacctttcttcacgttga 1135

                                                                  
Query: 417  gagcgaccatggctggatagccatagccaccgactccgacctgcttctccagat 470
            |||| |||||||| |||||||| ||||| || || || ||||| ||||| ||||
Sbjct: 1134 gagctaccatggcgggatagccgtagccgcccacaccaacctggttctcgagat 1081



 Score =  109 bits (55), Expect = 1e-20
 Identities = 83/91 (91%), Gaps = 1/91 (1%)
 Strand = Plus / Minus

                                                                       
Query: 584 aggatgtctggaaggaa-gacacaaagcaaatggcagcagaagcacacttctcttccatc 642
           ||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||| 
Sbjct: 967 aggatgtctggaaggaatgatacaaaacaaatggcagcagaagcgcacttctcttccatg 908

                                          
Query: 643 acatctgcgctagtcaactcagaaacttcag 673
           ||||| | || ||||||||||||||||||||
Sbjct: 907 acatccgggccagtcaactcagaaacttcag 877



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 493  ccagacaaaactgtatggactcttcttaaatttctcagcaacagatagtagcagctcaag 552
            ||||||||||||||||||||||     ||| |||||||| ||||| || || ||||||||
Sbjct: 1058 ccagacaaaactgtatggactcnnnnnaaacttctcagctacagagagcaggagctcaag 999

              
Query: 553  gt 554
            ||
Sbjct: 998  gt 997
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  198 bits (100), Expect = 2e-47
 Identities = 131/140 (93%), Gaps = 1/140 (0%)
 Strand = Plus / Minus

                                                                            
Query: 503      ctgtatggactcttcttaaatttctcagcaacagatagtagcagctcaaggtacttgttt 562
                |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 16880229 ctgtatggactctttttaaatttctcagcaacagataatagcagctcaaggtacttgttt 16880170

                                                                            
Query: 563      cttccttctgcctttgagtccaggatgtctggaagg-aagacacaaagcaaatggcagca 621
                |||||||| |||||||| |||| ||| ||||||||| |||| ||||||||||||||||||
Sbjct: 16880169 cttccttcggcctttgaatccaagatatctggaaggaaagatacaaagcaaatggcagca 16880110

                                    
Query: 622      gaagcacacttctcttccat 641
                |||||||| |||||||||||
Sbjct: 16880109 gaagcacatttctcttccat 16880090



 Score =  131 bits (66), Expect = 3e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                            
Query: 380      ctacggagcggagcgtatgcgcctttcttcacgttgagagcgaccatggctggatagcca 439
                |||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 16880755 ctacggagtggagcatatgcgccttttttcacgttgagagcaaccatcgctggatagcca 16880696

                                                                            
Query: 440      tagccaccgactccgacctgcttctccagatcagcttgcttgccggcgcctgcccagaca 499
                || ||||| ||||| || |||||||| |||||||||||||| || ||  ||| |||||||
Sbjct: 16880695 taaccaccaactccaacttgcttctcaagatcagcttgcttcccagcagctgtccagaca 16880636

                      
Query: 500      aaactg 505
                ||||||
Sbjct: 16880635 aaactg 16880630



 Score =  107 bits (54), Expect = 5e-20
 Identities = 147/178 (82%)
 Strand = Plus / Minus

                                                                            
Query: 177      agaatcacaactcgtcgttgggcgcagagctgtccgccatgagctcctcgagcgagaact 236
                |||||||||||||||| ||    | |||| |||| ||||| |||||||| || ||||| |
Sbjct: 16881040 agaatcacaactcgtcatttactggagagttgtcggccatcagctcctcaagggagaatt 16880981

                                                                            
Query: 237      cgtcctcctcgatgacctctccatccttgccgtcccatggttccgactggaccaccgtcg 296
                ||||||| || || ||||| ||||| ||||||||||||||||| || ||||| | ||| |
Sbjct: 16880980 cgtcctcttcaataacctcaccatctttgccgtcccatggttcagattggactatcgttg 16880921

                                                                          
Query: 297      gggcgccctccagaggaaggttgccctttccgccgcgccctgcctccttcacaaactc 354
                |||  || |||| |||||| || ||||| || ||||||||||| ||||||||||||||
Sbjct: 16880920 gggtaccgtccaaaggaagattacccttcccaccgcgccctgcttccttcacaaactc 16880863



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 654      agtcaactcagaaacttcaggtggtgcagcgttcgcttccagctgctccaa 704
                |||||||||||||||||||||||| ||||| || ||||||| |||||||||
Sbjct: 16879988 agtcaactcagaaacttcaggtggagcagcattggcttccaactgctccaa 16879938
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>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score =  198 bits (100), Expect = 2e-47
 Identities = 131/140 (93%), Gaps = 1/140 (0%)
 Strand = Plus / Minus

                                                                         
Query: 503   ctgtatggactcttcttaaatttctcagcaacagatagtagcagctcaaggtacttgttt 562
             |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10042 ctgtatggactctttttaaatttctcagcaacagataatagcagctcaaggtacttgttt 9983

                                                                         
Query: 563   cttccttctgcctttgagtccaggatgtctggaagg-aagacacaaagcaaatggcagca 621
             |||||||| |||||||| |||| ||| ||||||||| |||| ||||||||||||||||||
Sbjct: 9982  cttccttcggcctttgaatccaagatatctggaaggaaagatacaaagcaaatggcagca 9923

                                 
Query: 622   gaagcacacttctcttccat 641
             |||||||| |||||||||||
Sbjct: 9922  gaagcacatttctcttccat 9903



 Score =  131 bits (66), Expect = 3e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                         
Query: 380   ctacggagcggagcgtatgcgcctttcttcacgttgagagcgaccatggctggatagcca 439
             |||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 10568 ctacggagtggagcatatgcgccttttttcacgttgagagcaaccatcgctggatagcca 10509

                                                                         
Query: 440   tagccaccgactccgacctgcttctccagatcagcttgcttgccggcgcctgcccagaca 499
             || ||||| ||||| || |||||||| |||||||||||||| || ||  ||| |||||||
Sbjct: 10508 taaccaccaactccaacttgcttctcaagatcagcttgcttcccagcagctgtccagaca 10449

                   
Query: 500   aaactg 505
             ||||||
Sbjct: 10448 aaactg 10443



 Score =  107 bits (54), Expect = 5e-20
 Identities = 147/178 (82%)
 Strand = Plus / Minus

                                                                         
Query: 177   agaatcacaactcgtcgttgggcgcagagctgtccgccatgagctcctcgagcgagaact 236
             |||||||||||||||| ||    | |||| |||| ||||| |||||||| || ||||| |
Sbjct: 10853 agaatcacaactcgtcatttactggagagttgtcggccatcagctcctcaagggagaatt 10794

                                                                         
Query: 237   cgtcctcctcgatgacctctccatccttgccgtcccatggttccgactggaccaccgtcg 296
             ||||||| || || ||||| ||||| ||||||||||||||||| || ||||| | ||| |
Sbjct: 10793 cgtcctcttcaataacctcaccatctttgccgtcccatggttcagattggactatcgttg 10734

                                                                       
Query: 297   gggcgccctccagaggaaggttgccctttccgccgcgccctgcctccttcacaaactc 354
             |||  || |||| |||||| || ||||| || ||||||||||| ||||||||||||||
Sbjct: 10733 gggtaccgtccaaaggaagattacccttcccaccgcgccctgcttccttcacaaactc 10676



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 654  agtcaactcagaaacttcaggtggtgcagcgttcgcttccagctgctccaa 704
            |||||||||||||||||||||||| ||||| || ||||||| |||||||||
Sbjct: 9801 agtcaactcagaaacttcaggtggagcagcattggcttccaactgctccaa 9751
to top
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1163_C07
          Length = 107121

 Score =  198 bits (100), Expect = 2e-47
 Identities = 131/140 (93%), Gaps = 1/140 (0%)
 Strand = Plus / Minus

                                                                         
Query: 503   ctgtatggactcttcttaaatttctcagcaacagatagtagcagctcaaggtacttgttt 562
             |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 77920 ctgtatggactctttttaaatttctcagcaacagataatagcagctcaaggtacttgttt 77861

                                                                         
Query: 563   cttccttctgcctttgagtccaggatgtctggaagg-aagacacaaagcaaatggcagca 621
             |||||||| |||||||| |||| ||| ||||||||| |||| ||||||||||||||||||
Sbjct: 77860 cttccttcggcctttgaatccaagatatctggaaggaaagatacaaagcaaatggcagca 77801

                                 
Query: 622   gaagcacacttctcttccat 641
             |||||||| |||||||||||
Sbjct: 77800 gaagcacatttctcttccat 77781



 Score =  131 bits (66), Expect = 3e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                         
Query: 380   ctacggagcggagcgtatgcgcctttcttcacgttgagagcgaccatggctggatagcca 439
             |||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 78446 ctacggagtggagcatatgcgccttttttcacgttgagagcaaccatcgctggatagcca 78387

                                                                         
Query: 440   tagccaccgactccgacctgcttctccagatcagcttgcttgccggcgcctgcccagaca 499
             || ||||| ||||| || |||||||| |||||||||||||| || ||  ||| |||||||
Sbjct: 78386 taaccaccaactccaacttgcttctcaagatcagcttgcttcccagcagctgtccagaca 78327

                   
Query: 500   aaactg 505
             ||||||
Sbjct: 78326 aaactg 78321



 Score =  107 bits (54), Expect = 5e-20
 Identities = 147/178 (82%)
 Strand = Plus / Minus

                                                                         
Query: 177   agaatcacaactcgtcgttgggcgcagagctgtccgccatgagctcctcgagcgagaact 236
             |||||||||||||||| ||    | |||| |||| ||||| |||||||| || ||||| |
Sbjct: 78731 agaatcacaactcgtcatttactggagagttgtcggccatcagctcctcaagggagaatt 78672

                                                                         
Query: 237   cgtcctcctcgatgacctctccatccttgccgtcccatggttccgactggaccaccgtcg 296
             ||||||| || || ||||| ||||| ||||||||||||||||| || ||||| | ||| |
Sbjct: 78671 cgtcctcttcaataacctcaccatctttgccgtcccatggttcagattggactatcgttg 78612

                                                                       
Query: 297   gggcgccctccagaggaaggttgccctttccgccgcgccctgcctccttcacaaactc 354
             |||  || |||| |||||| || ||||| || ||||||||||| ||||||||||||||
Sbjct: 78611 gggtaccgtccaaaggaagattacccttcccaccgcgccctgcttccttcacaaactc 78554



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 654   agtcaactcagaaacttcaggtggtgcagcgttcgcttccagctgctccaa 704
             |||||||||||||||||||||||| ||||| || ||||||| |||||||||
Sbjct: 77679 agtcaactcagaaacttcaggtggagcagcattggcttccaactgctccaa 77629
to top
>emb|AJ719135.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-31-530, cultivar Bright
           Yellow 2
          Length = 501

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 604 acaaagcaaatggcagcagaagcacacttctcttccatcacatctgcgctagtcaactca 663
           |||||||| || |||||||||  ||| |||| |||||| ||||||| |||||||||||||
Sbjct: 320 acaaagcagatngcagcagaattacatttctnttccatgacatctgggctagtcaactca 261

                             
Query: 664 gaaacttcaggtggtgca 681
              |||||||| ||||||
Sbjct: 260 atcacttcaggaggtgca 243
to top
>gb|AC011382.4| Homo sapiens chromosome 5 clone CTB-13H5, complete sequence
          Length = 86829

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 76    ataaagaaaaggcattccaaaaagtg 101
             |||||||| |||||||||||||||||
Sbjct: 50467 ataaagaataggcattccaaaaagtg 50492
to top
>gb|M99566.1|SYNSCOS sCos cloning vector SfiI containing bacteriophage promoters and
            flanking restriction sites in sCos vectors
          Length = 7937

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 1567 cacaaagcaaatggcagcaga 1547



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 603 cacaaagcaaatggcagcaga 623
           |||||||||||||||||||||
Sbjct: 486 cacaaagcaaatggcagcaga 466
to top
>gb|M99569.1|SYNPWE15 sCos cloning vector SfiI containing bacteriophage promoters and
            flanking restriction sites in sCos vectors
          Length = 8164

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 1036 cacaaagcaaatggcagcaga 1016
to top
>gb|AC025962.5|AC025962 Homo sapiens chromosome 8, clone RP11-790J24, complete sequence
          Length = 167872

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 616   gcagcagaagcacacttctct 636
             |||||||||||||||||||||
Sbjct: 21268 gcagcagaagcacacttctct 21248
to top
>emb|BX511005.6| Zebrafish DNA sequence from clone DKEY-72N1 in linkage group 5,
             complete sequence
          Length = 139111

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   caaattgtacagtgtacacat 129
             |||||||||||||||||||||
Sbjct: 59485 caaattgtacagtgtacacat 59505
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>gb|U00003.1|PIB8 pIB8 cosmid vector; complete sequence
          Length = 5406

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 4433 cacaaagcaaatggcagcaga 4453
to top
>gb|AY532632.1| Cloning vector pLAFR, complete sequence
          Length = 20352

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 603   cacaaagcaaatggcagcaga 623
             |||||||||||||||||||||
Sbjct: 18606 cacaaagcaaatggcagcaga 18626
to top
>gb|AE004686.1| Pseudomonas aeruginosa PAO1, section 247 of 529 of the complete
            genome
          Length = 10905

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  tcctcgatgacctctccatcc 262
            |||||||||||||||||||||
Sbjct: 9036 tcctcgatgacctctccatcc 9016
to top
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence
          Length = 188691

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 77    taaagaaaaggcattccaaaa 97
             |||||||||||||||||||||
Sbjct: 24672 taaagaaaaggcattccaaaa 24692
to top
>gb|AF184978.1|AF184978 Binary vector pCLD04541, complete sequence
          Length = 27608

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 4587 cacaaagcaaatggcagcaga 4607
to top
>emb|Z96759.1|HS8QT041 H.sapiens telomeric DNA sequence, clone 8QTEL041, read
           8QTELOO041.seq
          Length = 342

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 603 cacaaagcaaatggcagcaga 623
           |||||||||||||||||||||
Sbjct: 79  cacaaagcaaatggcagcaga 99
to top
>gb|L19900.1|SYNSVPHEP Cloning vector cosmid svPHEP DNA sequence encoding beta-lactamase and
            HSV thymidine kinase genes
          Length = 9201

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 7111 cacaaagcaaatggcagcaga 7131
to top
>gb|L19899.1|SYNCVPTCF Cloning vector cosmid pTCF DNA sequence encoding beta-lactamase gene
          Length = 7941

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 6508 cacaaagcaaatggcagcaga 6488
to top
>gb|AF136442.1|AF136442 Cloning vector pScosBC1, E. coli-Burkholderia shuttle cosmid vector,
            complete sequence
          Length = 8772

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 1567 cacaaagcaaatggcagcaga 1547



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 603 cacaaagcaaatggcagcaga 623
           |||||||||||||||||||||
Sbjct: 486 cacaaagcaaatggcagcaga 466
to top
>gb|AF129504.1|AF129504 Cloning vector pWDYcos1.0.1, complete sequence
          Length = 7478

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 5387 cacaaagcaaatggcagcaga 5367



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 4305 cacaaagcaaatggcagcaga 4285
to top
>dbj|AB055064.1| Synthetic transposable element dAc-I-RS DNA, complete sequence
          Length = 7635

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 5342 cacaaagcaaatggcagcaga 5322
to top
>emb|Z12112.1|PWE15A pWE15A cosmid vector DNA
          Length = 8213

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 7175 cacaaagcaaatggcagcaga 7195
to top
>emb|X94336.1|CVBETLACT Cloning vector beta-lactamase gene
          Length = 11142

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 603 cacaaagcaaatggcagcaga 623
           |||||||||||||||||||||
Sbjct: 678 cacaaagcaaatggcagcaga 698
to top
>emb|X98612.1|CVPJB8 Artificial cloning vector pjb8
          Length = 5410

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 603 cacaaagcaaatggcagcaga 623
           |||||||||||||||||||||
Sbjct: 978 cacaaagcaaatggcagcaga 958
to top
>emb|X65279.1|PWE15 pWE15 cosmid vector DNA
          Length = 8136

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 7135 cacaaagcaaatggcagcaga 7155
to top
>gb|AF075573.1|AF075573 Cloning vector pWEB, complete sequence
          Length = 8179

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 1053 cacaaagcaaatggcagcaga 1033
to top
>gb|L76273.1|SYNHPH Cloning vector pMLF2 hygromycin B phosphotransferase (HPH) gene,
            complete cds
          Length = 9184

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 4763 cacaaagcaaatggcagcaga 4743
to top
>gb|AC113182.14| Mus musculus chromosome 8, clone RP23-39F24, complete sequence
          Length = 217373

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 557    ttgtttcttccttctgccttt 577
              |||||||||||||||||||||
Sbjct: 142631 ttgtttcttccttctgccttt 142611
to top
>gb|U07340.1|U07340 Cosmid vector pTL5, complete sequence
          Length = 5793

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 603  cacaaagcaaatggcagcaga 623
            |||||||||||||||||||||
Sbjct: 3261 cacaaagcaaatggcagcaga 3281
to top
>dbj|AP003697.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1261H7, complete
              sequence
          Length = 170468

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 616    gcagcagaagcacacttctct 636
              |||||||||||||||||||||
Sbjct: 149915 gcagcagaagcacacttctct 149935
to top
>ref|XM_483499.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1345

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  tgacctctccatccttgccg 268
            ||||||||||||||||||||
Sbjct: 1050 tgacctctccatccttgccg 1031
to top
>gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, complete sequence
          Length = 208309

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 315   ggttgccctttccgccgcgccctgcctccttc 346
             ||||||||||||| || | |||||||||||||
Sbjct: 75976 ggttgccctttccccctctccctgcctccttc 76007
to top
>gb|AC113587.16| Mus musculus chromosome 15, clone RP24-424I13, complete sequence
          Length = 191054

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   atggctggatagccatagcc 444
             ||||||||||||||||||||
Sbjct: 58625 atggctggatagccatagcc 58644
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 556     cttgtttcttccttctgcctttga 579
               |||||||||| |||||||||||||
Sbjct: 1938790 cttgtttcttacttctgcctttga 1938813
to top
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 629    acttctcttccatcacatct 648
              ||||||||||||||||||||
Sbjct: 495336 acttctcttccatcacatct 495355
to top
>gb|AC158606.14| Mus musculus 10 BAC RP24-456P10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 162274

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ctaacattgagataaagaaa 84
             ||||||||||||||||||||
Sbjct: 38331 ctaacattgagataaagaaa 38312
to top
>gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosome 8, complete sequence
          Length = 199464

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 529    agcaacagatagtagcagct 548
              ||||||||||||||||||||
Sbjct: 191521 agcaacagatagtagcagct 191502
to top
>ref|XM_953631.1| Neurospora crassa OR74A hypothetical protein (NCU09658.1) partial
            mRNA
          Length = 3048

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  tcctcgatgacctctccatc 261
            ||||||||||||||||||||
Sbjct: 1370 tcctcgatgacctctccatc 1351
to top
>ref|XM_330307.1| Neurospora crassa OR74A hypothetical protein (NCU09658.1) partial
            mRNA
          Length = 3048

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  tcctcgatgacctctccatc 261
            ||||||||||||||||||||
Sbjct: 1370 tcctcgatgacctctccatc 1351
to top
>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence
          Length = 171061

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gagaactcgtcctcctcgat 249
              ||||||||||||||||||||
Sbjct: 170896 gagaactcgtcctcctcgat 170915
to top
>gb|AC147348.2| Xenopus tropicalis clone CH216-122H9, complete sequence
          Length = 161088

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 614   tggcagcagaagcacacttc 633
             ||||||||||||||||||||
Sbjct: 38892 tggcagcagaagcacacttc 38873
to top
>gb|AC131669.3| Mus musculus BAC clone RP23-307E9 from chromosome 7, complete sequence
          Length = 189956

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     tgctaacattgagataaaga 82
              ||||||||||||||||||||
Sbjct: 127402 tgctaacattgagataaaga 127383
to top
>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence
          Length = 236220

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     agataaagaaaaggcattcc 93
              ||||||||||||||||||||
Sbjct: 140406 agataaagaaaaggcattcc 140387
to top
>ref|XM_572822.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNI01780) partial mRNA
          Length = 1859

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 629  acttctcttccatcacatct 648
            ||||||||||||||||||||
Sbjct: 1117 acttctcttccatcacatct 1136
to top
>gb|AC122250.4| Mus musculus BAC clone RP23-167A3 from chromosome 19, complete sequence
          Length = 202060

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     caaggacacccccacacctt 38
              ||||||||||||||||||||
Sbjct: 137450 caaggacacccccacacctt 137469
to top
>emb|AJ224870.1|SCAJ4870 Streptomyces clavuligerus lexA, nrdR & nrdJ genes
          Length = 5940

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  ctcgtcctcctcgatgacct 254
            ||||||||||||||||||||
Sbjct: 5665 ctcgtcctcctcgatgacct 5646
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>gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, complete sequence
          Length = 219899

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gagaactcgtcctcctcgat 249
             ||||||||||||||||||||
Sbjct: 33851 gagaactcgtcctcctcgat 33870
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>gb|AC114407.24| Mus musculus chromosome 10, clone RP23-51G1, complete sequence
          Length = 143388

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   ctaacattgagataaagaaa 84
            ||||||||||||||||||||
Sbjct: 5674 ctaacattgagataaagaaa 5693
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>emb|AL096814.26|HSDJ139D8 Human DNA sequence from clone RP1-139D8 on chromosome 6p12.1-21.1
              Contains genes for GUCA1A (guanylate cyclase activator 1A)
              and GUCA1B (guanylate cyclase activator 1B) both from
              retina, the 3' end of the TReP-132 gene for zinc finger
              transcription regulating protein, the MRPS10 gene for
              mitochondrial ribosomal protein S10, the 5' end the gene
              for a novel protein, the gene for a novel protein and two
              CpG Islands, complete sequence
          Length = 167078

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     cacccccacaccttgcacac 44
              ||||||||||||||||||||
Sbjct: 147301 cacccccacaccttgcacac 147320
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>emb|AL035608.11|HS479J7 Human DNA sequence from clone RP3-479J7 on chromosome Xq21.33-23
             Contains the gene for tenomodulin protein (TNMD), the
             TM4SF6 gene for transmembrane 4 superfamily member 6, the
             5' end of the gene for sushi-repeat protein (SRPUL) and
             two CpG islands, complete sequence
          Length = 97189

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   cttgtttcttccttctgcct 575
             ||||||||||||||||||||
Sbjct: 23481 cttgtttcttccttctgcct 23462
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>emb|AL772193.5| Zebrafish DNA sequence from clone CH211-194C5 in linkage group 7 Contains
              a novel gene similar to PPP1R14B (protein phosphatase 1,
              regulatory (inhibitor) subunit 14B), a novel gene similar
              to BRMS1 (breast cancer metastasis-suppressor 1 (BRMS1),
              the pc gene for pyruvate carboxylase and three putative
              novel retrotransposons, complete sequence
          Length = 192531

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    tgcctccttcacaaactcgg 356
              ||||||||||||||||||||
Sbjct: 144220 tgcctccttcacaaactcgg 144201
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 664    gaaacttcaggtggtgcagc 683
              ||||||||||||||||||||
Sbjct: 141483 gaaacttcaggtggtgcagc 141502
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 603     cacaaagcaaatggcagcag 622
               ||||||||||||||||||||
Sbjct: 2159956 cacaaagcaaatggcagcag 2159975
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>gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, complete sequence
          Length = 184862

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tctccagatcagcttgcttg 481
             ||||||||||||||||||||
Sbjct: 52882 tctccagatcagcttgcttg 52901
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>gb|AC092810.2| Homo sapiens chromosome 1 clone RP11-385M4, complete sequence
          Length = 173917

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   tttcttccttctgcctttga 579
             ||||||||||||||||||||
Sbjct: 54830 tttcttccttctgcctttga 54849
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>gb|AC080066.6| Homo sapiens BAC clone CTD-2321M19 from 7, complete sequence
          Length = 75793

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aagaaaaggcattccaaaaa 98
             ||||||||||||||||||||
Sbjct: 16415 aagaaaaggcattccaaaaa 16396
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 249      tgacctctccatccttgccg 268
                ||||||||||||||||||||
Sbjct: 26540041 tgacctctccatccttgccg 26540060
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>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702E04
          Length = 190948

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tgacctctccatccttgccg 268
             ||||||||||||||||||||
Sbjct: 88908 tgacctctccatccttgccg 88927
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>dbj|AP000388.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MRI12
          Length = 18212

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   aagaaaaggcattccaaaaa 98
            ||||||||||||||||||||
Sbjct: 9513 aagaaaaggcattccaaaaa 9494
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>emb|BX470085.6| Zebrafish DNA sequence from clone DKEY-238K17 in linkage group 20,
             complete sequence
          Length = 107263

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   tgcctccttcacaaactcgg 356
             ||||||||||||||||||||
Sbjct: 31198 tgcctccttcacaaactcgg 31217
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>dbj|AK119370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-H09, full
            insert sequence
          Length = 2945

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  tgacctctccatccttgccg 268
            ||||||||||||||||||||
Sbjct: 1139 tgacctctccatccttgccg 1158
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>dbj|AK073978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N21, full
            insert sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  tgacctctccatccttgccg 268
            ||||||||||||||||||||
Sbjct: 1050 tgacctctccatccttgccg 1031
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>tpe|BN000648.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx119 gene for
            class III peroxidase 119 precursor, exons 1-3
          Length = 2477

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  tgacctctccatccttgccg 268
            ||||||||||||||||||||
Sbjct: 2448 tgacctctccatccttgccg 2429
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>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    cacccccacaccttgcacac 44
             ||||||||||||||||||||
Sbjct: 61935 cacccccacaccttgcacac 61916
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>gb|AC123724.9| Mus musculus chromosome 15, clone RP23-432N1, complete sequence
          Length = 200503

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    atggctggatagccatagcc 444
              ||||||||||||||||||||
Sbjct: 182782 atggctggatagccatagcc 182801
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>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    ggaccaccgtcggggcgccc 304
              ||||||||||||||||||||
Sbjct: 157627 ggaccaccgtcggggcgccc 157646
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>gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complete sequence
          Length = 218283

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   agcaacagatagtagcagct 548
             ||||||||||||||||||||
Sbjct: 26327 agcaacagatagtagcagct 26308
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>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete
              sequence
          Length = 217775

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    aaaactgtatggactcttct 518
              ||||||||||||||||||||
Sbjct: 147074 aaaactgtatggactcttct 147055


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,339,696
Number of Sequences: 3902068
Number of extensions: 6339696
Number of successful extensions: 121929
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121622
Number of HSP's gapped (non-prelim): 293
length of query: 711
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 688
effective length of database: 17,143,297,704
effective search space: 11794588820352
effective search space used: 11794588820352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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