| Clone Name | rbags33p15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, complete cds Length = 2405 Score = 678 bits (342), Expect = 0.0 Identities = 424/451 (94%), Gaps = 4/451 (0%) Strand = Plus / Minus Query: 274 tcatatttcagagggttttcgccgaatccttaccaca----tatctcattgcaaaggaag 329 ||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||| Sbjct: 2278 tcatacttcagagggttttcgcggaatccttaccacgccattttctcattgcaaaggaag 2219 Query: 330 actcttatgggtgtacacaacatccttgtcaccattcacaatttgccctttacctcgtaa 389 |||||||||||||||| |||||||||||||||||||||| | ||||||||| |||||||| Sbjct: 2218 actcttatgggtgtactcaacatccttgtcaccattcaccacttgccctttccctcgtaa 2159 Query: 390 gagccatcgcgtagtcaagagaccttcaacacccacgggtccacgtgcatgtatacggcc 449 ||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2158 gagccatcgtgtagttaaaagaccttcaacacccacaggtccacgtgcatgtatacggcc 2099 Query: 450 tgtacttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtact 509 |||||||||||||||||||||||| || ||||| ||||| ||||| || ||||||||||| Sbjct: 2098 tgtacttatgccaacctcagcaccgagcccaaaacgagcaccatcggagaatcttgtact 2039 Query: 510 cgcattgtataatacggcagcactatcaacttgacgtagaaaggtctctgctactgtatc 569 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2038 cgcgttgtataatacggcagcactatcaacttgacgtagaaaggtctctgctactttatc 1979 Query: 570 atctgtagtgaccacacaatctgtatgtgcacttccatagcgatgtatatggtcaattgc 629 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1978 atctgtagtgaccacacagtctgtatgtgcacttccatagcgatgtatatggtcaattgc 1919 Query: 630 tgattgtacatcatcaactatctcaactgtgcaagccatagaactgtactccagatgtaa 689 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1918 tgattgtacatcatcaactatctcaacagtgcaagccatagaactgtactccagatgtaa 1859 Query: 690 tgaatctgctttcgggtagcccaatatttta 720 |||||||||||||||||||||||||| |||| Sbjct: 1858 tgaatctgctttcgggtagcccaatacttta 1828 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/98 (83%), Gaps = 4/98 (4%) Strand = Plus / Minus Query: 124 attataaccctggaaatccggagcctccaagctcatacaaactgatctaccaaaccacca 183 |||||||| | ||| | ||| |||||||||||||||||||| ||||| ||| | || ||| Sbjct: 2404 attataacaccggagagccgaagcctccaagctcatacaaattgatccaccgatccgcca 2345 Query: 184 ca--atgatggtttgt--acaaattaattaatccaccg 217 || | |||||||||| ||||||||||| |||||||| Sbjct: 2344 cagtaagatggtttgtacacaaattaattgatccaccg 2307
>gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2260 Score = 656 bits (331), Expect = 0.0 Identities = 388/407 (95%) Strand = Plus / Minus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | || Sbjct: 2260 ctcattgcaaaggaaggctcttatgggtgtactcaacatccttgtcaccattcaccactt 2201 Query: 374 gccctttacctcgtaagagccatcgcgtagtcaagagaccttcaacacccacgggtccac 433 ||||||| ||||||||||||||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 2200 gccctttccctcgtaagagccatcgtgtagttaaaagaccttcaacacccacaggtccac 2141 Query: 434 gtgcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccat 493 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 2140 gtgcatgtatacggcctgtacttatgccaacctcagcaccgagtccaaaacgagcaccat 2081 Query: 494 cagaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaagg 553 | || |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2080 cggagaatcttgtactcgcgttgtataatacggcagcactatcaacttgacgtagaaagg 2021 Query: 554 tctctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgat 613 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2020 tctctgctactttatcatctgtagtgaccacacagtctgtatgtgcacttccatagcgat 1961 Query: 614 gtatatggtcaattgctgattgtacatcatcaactatctcaactgtgcaagccatagaac 673 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1960 gtatatggtcaattgctgattgtacatcatcaactatctcaactgtgcaagccatagaac 1901 Query: 674 tgtactccagatgtaatgaatctgctttcgggtagcccaatatttta 720 |||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1900 tgtactccagatgtaatgaatctgcttttgggtagcccaatacttta 1854
>dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099M14, full insert sequence Length = 2767 Score = 396 bits (200), Expect = e-107 Identities = 335/380 (88%) Strand = Plus / Minus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 2270 ctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccactt 2211 Query: 374 gccctttacctcgtaagagccatcgcgtagtcaagagaccttcaacacccacgggtccac 433 |||| ||||| |||| |||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 2210 gcccacgccctcgcaagatccatcgtgtagttaagagaccttcaacacccactggtccac 2151 Query: 434 gtgcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccat 493 | ||||| ||||| ||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 2150 gggcatggatacgccctgtgcttatgccaacctcagcacccaatccaaaacgagccccat 2091 Query: 494 cagaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaagg 553 |||| ||||| ||||| ||||| | ||||| ||||||||||||||| |||||||| | Sbjct: 2090 cagagaatctcgtacttgcattatgaaatacagcagcactatcaactctgcgtagaaaag 2031 Query: 554 tctctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgat 613 |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| |||| Sbjct: 2030 tctctgctaccttatcatctgtagtgacgatacaatctgtatgagcacttccataacgat 1971 Query: 614 gtatatggtcaattgctgattgtacatcatcaactatctcaactgtgcaagccatagaac 673 | |||||||||||||||||||| ||||||||||| | |||||| ||||| |||||||||| Sbjct: 1970 gaatatggtcaattgctgattgaacatcatcaacaaactcaacagtgcaggccatagaac 1911 Query: 674 tgtactccagatgtaatgaa 693 | ||||| |||| |||||| Sbjct: 1910 tatactcatgatgaaatgaa 1891
>dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxylate synthetase, complete cds Length = 2549 Score = 396 bits (200), Expect = e-107 Identities = 335/380 (88%) Strand = Plus / Minus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 2250 ctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccactt 2191 Query: 374 gccctttacctcgtaagagccatcgcgtagtcaagagaccttcaacacccacgggtccac 433 |||| ||||| |||| |||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 2190 gcccacgtcctcgcaagatccatcgtgtagttaagagaccttcaacacccactggtccac 2131 Query: 434 gtgcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccat 493 | ||||| ||||| ||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 2130 gggcatggatacgccctgtgcttatgccaacctcagcacccaatccaaaacgagccccat 2071 Query: 494 cagaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaagg 553 |||| ||||| ||||| ||||| | ||||| ||||||||||||||| |||||||| | Sbjct: 2070 cagagaatctcgtacttgcattatgaaatacagcagcactatcaactctgcgtagaaaag 2011 Query: 554 tctctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgat 613 |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| |||| Sbjct: 2010 tctctgctaccttatcatctgtagtgacgatacaatctgtatgagcacttccataacgat 1951 Query: 614 gtatatggtcaattgctgattgtacatcatcaactatctcaactgtgcaagccatagaac 673 | |||||||||||||||||||| ||||||||||| | |||||| ||||| |||||||||| Sbjct: 1950 gaatatggtcaattgctgattgaacatcatcaacaaactcaacagtgcaggccatagaac 1891 Query: 674 tgtactccagatgtaatgaa 693 | ||||| |||| |||||| Sbjct: 1890 tatactcatgatgaaatgaa 1871
>gb|AY574031.1| Oryza sativa (japonica cultivar-group) delta-1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2151 Score = 394 bits (199), Expect = e-106 Identities = 334/379 (88%) Strand = Plus / Minus Query: 315 tcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaatttg 374 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||| Sbjct: 2151 tcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccacttg 2092 Query: 375 ccctttacctcgtaagagccatcgcgtagtcaagagaccttcaacacccacgggtccacg 434 ||| ||||| |||| |||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 2091 cccacgccctcgcaagatccatcgtgtagttaagagaccttcaacacccactggtccacg 2032 Query: 435 tgcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccatc 494 ||||| ||||| ||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 2031 ggcatggatacgccctgtgcttatgccaacctcagcacccaatccaaaacgagccccatc 1972 Query: 495 agaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaaggt 554 ||| ||||| ||||| ||||| | ||||| ||||||||||||||| |||||||| || Sbjct: 1971 agagaatctcgtacttgcattatgaaatacagcagcactatcaactctgcgtagaaaagt 1912 Query: 555 ctctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgatg 614 ||||||||| |||||||||||||||| | |||||||||||| ||||||||||| ||||| Sbjct: 1911 ctctgctaccttatcatctgtagtgacgatacaatctgtatgagcacttccataacgatg 1852 Query: 615 tatatggtcaattgctgattgtacatcatcaactatctcaactgtgcaagccatagaact 674 |||||||||||||||||||| ||||||||||| | |||||| ||||| ||||||||||| Sbjct: 1851 aatatggtcaattgctgattgaacatcatcaacaaactcaacagtgcaggccatagaact 1792 Query: 675 gtactccagatgtaatgaa 693 ||||| |||| |||||| Sbjct: 1791 atactcatgatgaaatgaa 1773
>gb|AY109740.1| Zea mays CL2942_1 mRNA sequence Length = 1961 Score = 315 bits (159), Expect = 1e-82 Identities = 333/391 (85%) Strand = Plus / Minus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 ||||||| || ||||| ||||||||||||| |||||| |||||||| |||||| | || Sbjct: 1605 ctcattgtaagggaaggttcttatgggtgtatgcaacattcttgtcacaattcaccactt 1546 Query: 374 gccctttacctcgtaagagccatcgcgtagtcaagagaccttcaacacccacgggtccac 433 |||| | ||||| | || ||| || || || |||||||||||||||||||| || || | Sbjct: 1545 gcccacttcctcgcatgatccagcgtgttgttaagagaccttcaacacccacaggcccgc 1486 Query: 434 gtgcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccat 493 | ||||||||||| ||||| |||||||||||||| ||||||| |||||| |||||||||| Sbjct: 1485 gagcatgtatacgccctgtgcttatgccaacctcggcacccaatccaaaacgagccccat 1426 Query: 494 cagaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaagg 553 |||| |||| |||||||||||| | ||||| ||||||||||||||||| || ||||| | Sbjct: 1425 cagagaatcgtgtactcgcattatgaaatacagcagcactatcaacttgccgcagaaaag 1366 Query: 554 tctctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgat 613 | ||||||||| |||||||||| |||| | ||||||||||||||||||||||| |||| Sbjct: 1365 tttctgctactttatcatctgtggtgataatgcaatctgtatgtgcacttccataacgat 1306 Query: 614 gtatatggtcaattgctgattgtacatcatcaactatctcaactgtgcaagccatagaac 673 ||||||||| ||||||||| |||||||||||||| | ||||| |||||| |||||||| | Sbjct: 1305 gtatatggttaattgctgactgtacatcatcaacgaactcaattgtgcaggccatagagc 1246 Query: 674 tgtactccagatgtaatgaatctgctttcgg 704 | || || |||| ||||||||||||||||| Sbjct: 1245 tatattcatgatggaatgaatctgctttcgg 1215
>ref|NM_190603.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2208 Score = 167 bits (84), Expect = 6e-38 Identities = 180/212 (84%) Strand = Plus / Minus Query: 436 gcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccatca 495 |||||||| || ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 2087 gcatgtatgcgccctgtgcttatgccaacctcagcacctagaccaaagcgagccccatca 2028 Query: 496 gaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaaggtc 555 | || | ||| || ||||| | ||||| ||||||||||||||||| ||||||| ||| Sbjct: 2027 cagaaccgtgtgcttgcattatggaataccgcagcactatcaacttgctgtagaaaagtc 1968 Query: 556 tctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgatgt 615 |||||| | | |||| ||||||| | |||||||| ||||||||||||||||||| | Sbjct: 1967 tctgctgcctttccatcagtagtgataatgcaatctgtgtgtgcacttccatagcgattt 1908 Query: 616 atatggtcaattgctgattgtacatcatcaac 647 ||||||||||||||||| || ||||||||||| Sbjct: 1907 atatggtcaattgctgactgcacatcatcaac 1876
>dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H21, full insert sequence Length = 2739 Score = 167 bits (84), Expect = 6e-38 Identities = 180/212 (84%) Strand = Plus / Minus Query: 436 gcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccatca 495 |||||||| || ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 2277 gcatgtatgcgccctgtgcttatgccaacctcagcacctagaccaaagcgagccccatca 2218 Query: 496 gaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaaggtc 555 | || | ||| || ||||| | ||||| ||||||||||||||||| ||||||| ||| Sbjct: 2217 cagaaccgtgtgcttgcattatggaataccgcagcactatcaacttgctgtagaaaagtc 2158 Query: 556 tctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgatgt 615 |||||| | | |||| ||||||| | |||||||| ||||||||||||||||||| | Sbjct: 2157 tctgctgcctttccatcagtagtgataatgcaatctgtgtgtgcacttccatagcgattt 2098 Query: 616 atatggtcaattgctgattgtacatcatcaac 647 ||||||||||||||||| || ||||||||||| Sbjct: 2097 atatggtcaattgctgactgcacatcatcaac 2066
>dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K03, full insert sequence Length = 3386 Score = 167 bits (84), Expect = 6e-38 Identities = 180/212 (84%) Strand = Plus / Minus Query: 436 gcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccatca 495 |||||||| || ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 2221 gcatgtatgcgccctgtgcttatgccaacctcagcacctagaccaaagcgagccccatca 2162 Query: 496 gaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaaggtc 555 | || | ||| || ||||| | ||||| ||||||||||||||||| ||||||| ||| Sbjct: 2161 cagaaccgtgtgcttgcattatggaataccgcagcactatcaacttgctgtagaaaagtc 2102 Query: 556 tctgctactgtatcatctgtagtgaccacacaatctgtatgtgcacttccatagcgatgt 615 |||||| | | |||| ||||||| | |||||||| ||||||||||||||||||| | Sbjct: 2101 tctgctgcctttccatcagtagtgataatgcaatctgtgtgtgcacttccatagcgattt 2042 Query: 616 atatggtcaattgctgattgtacatcatcaac 647 ||||||||||||||||| || ||||||||||| Sbjct: 2041 atatggtcaattgctgactgcacatcatcaac 2010
>gb|AY108698.1| Zea mays PCO099071 mRNA sequence Length = 599 Score = 145 bits (73), Expect = 2e-31 Identities = 160/189 (84%) Strand = Plus / Plus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 ||||| |||| ||||| ||||||||||||| | | ||| |||||||| ||||| | || Sbjct: 396 ctcatggcaatggaaggttcttatgggtgtatgcgatatcattgtcaccgttcaccactt 455 Query: 374 gccctttacctcgtaagagccatcgcgtagtcaagagaccttcaacacccacgggtccac 433 |||| | ||||| | || ||| ||||| || ||||||||||||||||||||||| |||| Sbjct: 456 gcccgctccctcgcatgatccagcgcgttgttaagagaccttcaacacccacgggcccac 515 Query: 434 gtgcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccat 493 | ||||||||||| ||||| |||||||||||||||||||||| |||||| |||||||| | Sbjct: 516 gagcatgtatacgccctgtgcttatgccaacctcagcacccaatccaaaacgagccccgt 575 Query: 494 cagaaaatc 502 |||| |||| Sbjct: 576 cagagaatc 584
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 103 bits (52), Expect = 8e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 72871 ctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccactt 72930 Query: 374 gccc 377 |||| Sbjct: 72931 gccc 72934 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 601 cttccatagcgatgtatatggtcaattgctgattgtacatcatcaactatctcaactgtg 660 |||||||| ||||| |||||||||||||||||||| ||||||||||| | |||||| ||| Sbjct: 73641 cttccataacgatgaatatggtcaattgctgattgaacatcatcaacaaactcaacagtg 73700 Query: 661 caagccatagaactgtactccagatgtaatgaa 693 || ||||||||||| ||||| |||| |||||| Sbjct: 73701 caggccatagaactatactcatgatgaaatgaa 73733 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 393 ccatcgcgtagtcaagagaccttcaacacccacgggtccacgtgcatgtatacggcctgt 452 |||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 73115 ccatcgtgtagttaagagaccttcaacacccactggtccacgggcatggatacgccctgt 73174 Query: 453 acttatgccaacct 466 ||||||||||||| Sbjct: 73175 gcttatgccaacct 73188 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 544 cgtagaaaggtctctgctactgtatcatctgtagtgaccacacaatctgtatgtgcact 602 |||||||| ||||||||||| |||||||||||||||| | |||||||||||| ||||| Sbjct: 73472 cgtagaaaagtctctgctaccttatcatctgtagtgacgatacaatctgtatgagcact 73530 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 463 acctcagcacccagtccaaagcgagccccatcagaaaatcttgtactcgcattgtataat 522 ||||||||||||| |||||| |||||||||||||| ||||| ||||| ||||| | ||| Sbjct: 73255 acctcagcacccaatccaaaacgagccccatcagagaatctcgtacttgcattatgaaat 73314 Query: 523 acggcagcact 533 || |||||||| Sbjct: 73315 acagcagcact 73325
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 103 bits (52), Expect = 8e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 22229606 ctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccactt 22229665 Query: 374 gccc 377 |||| Sbjct: 22229666 gccc 22229669 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 601 cttccatagcgatgtatatggtcaattgctgattgtacatcatcaactatctcaactgtg 660 |||||||| ||||| |||||||||||||||||||| ||||||||||| | |||||| ||| Sbjct: 22230376 cttccataacgatgaatatggtcaattgctgattgaacatcatcaacaaactcaacagtg 22230435 Query: 661 caagccatagaactgtactccagatgtaatgaa 693 || ||||||||||| ||||| |||| |||||| Sbjct: 22230436 caggccatagaactatactcatgatgaaatgaa 22230468 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 393 ccatcgcgtagtcaagagaccttcaacacccacgggtccacgtgcatgtatacggcctgt 452 |||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 22229850 ccatcgtgtagttaagagaccttcaacacccactggtccacgggcatggatacgccctgt 22229909 Query: 453 acttatgccaacct 466 ||||||||||||| Sbjct: 22229910 gcttatgccaacct 22229923 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 544 cgtagaaaggtctctgctactgtatcatctgtagtgaccacacaatctgtatgtgcact 602 |||||||| ||||||||||| |||||||||||||||| | |||||||||||| ||||| Sbjct: 22230207 cgtagaaaagtctctgctaccttatcatctgtagtgacgatacaatctgtatgagcact 22230265 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 463 acctcagcacccagtccaaagcgagccccatcagaaaatcttgtactcgcattgtataat 522 ||||||||||||| |||||| |||||||||||||| ||||| ||||| ||||| | ||| Sbjct: 22229990 acctcagcacccaatccaaaacgagccccatcagagaatctcgtacttgcattatgaaat 22230049 Query: 523 acggcagcact 533 || |||||||| Sbjct: 22230050 acagcagcact 22230060
>emb|AJ278820.1|MTR278820 Medicago truncatula partial mRNA for pyrroline-5-carboxylate synthetase 2 (p5CS2 gene) Length = 801 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 454 cttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtactcgca 513 ||||| |||||||||||||| || |||||||| |||||||| |||| |||||||| ||| Sbjct: 633 cttattccaacctcagcaccgagcccaaagcgtgccccatcgcaaaaccttgtacttgca 574 Query: 514 ttgtataatacggcagcactatcaacttga 543 |||| |||||||||||||| ||||||||| Sbjct: 573 ttgtgaaatacggcagcactgtcaacttga 544
>gb|U92286.1|ADU92286 Actinidia deliciosa pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2378 Score = 89.7 bits (45), Expect = 1e-14 Identities = 117/141 (82%) Strand = Plus / Minus Query: 412 ccttcaacacccacgggtccacgtgcatgtatacggcctgtacttatgccaacctcagca 471 ||||||||||| || ||||||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 2062 ccttcaacaccgacaggtccacgtgcatgtatcctacttgtacttatcccaacctctgca 2003 Query: 472 cccagtccaaagcgagccccatcagaaaatcttgtactcgcattgtataatacggcagca 531 || || || || |||||||| ||| ||||||||| || ||||||| | ||| | || | Sbjct: 2002 cctagcccgaaacgagccccgtcactaaatcttgtgcttgcattgtgaagtacagaagaa 1943 Query: 532 ctatcaacttgacgtagaaag 552 || |||||||||||||||||| Sbjct: 1942 ctgtcaacttgacgtagaaag 1922
>gb|AY105865.1| Zea mays PCO085448 mRNA sequence Length = 1685 Score = 85.7 bits (43), Expect = 2e-13 Identities = 196/247 (79%) Strand = Plus / Minus Query: 314 ctcattgcaaaggaagactcttatgggtgtacacaacatccttgtcaccattcacaattt 373 ||||||||||||||||| ||| |||||||| || || |||||||||||||||| | || Sbjct: 1355 ctcattgcaaaggaagatccttgtgggtgtaaaccactcccttgtcaccattcaccactt 1296 Query: 374 gccctttacctcgtaagagccatcgcgtagtcaagagaccttcaacacccacgggtccac 433 | || |||| || || | || || ||||| | || || ||||| || || ||||| | Sbjct: 1295 gtccactaccgcgcaaaatgcagcgagtagttagaagtccatcaactccaacaggtccgc 1236 Query: 434 gtgcatgtatacggcctgtacttatgccaacctcagcacccagtccaaagcgagccccat 493 | |||||||| || ||||||||||||||||||||||||| || ||||| || | ||||| Sbjct: 1235 gggcatgtatgcgctctgtacttatgccaacctcagcacctagcccaaaacgcgtcccat 1176 Query: 494 cagaaaatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaagg 553 || |||| ||||| || ||||| | || || || |||||||||||||| | ||||||| Sbjct: 1175 cacaaaaccttgtgcttgcattatgaaacacagcggcactatcaacttgctgcagaaagg 1116 Query: 554 tctctgc 560 |||||| Sbjct: 1115 cctctgc 1109 Score = 48.1 bits (24), Expect = 0.041 Identities = 66/80 (82%) Strand = Plus / Minus Query: 589 tctgtatgtgcacttccatagcgatgtatatggtcaattgctgattgtacatcatcaact 648 ||||| |||||||||||||| |||| ||| || || || ||||| || ||||||||||| Sbjct: 1080 tctgtgtgtgcacttccataacgatttatgtgatcgatagctgactgcacatcatcaaca 1021 Query: 649 atctcaactgtgcaagccat 668 | || |||||||| ||||| Sbjct: 1020 aattcgactgtgcatgccat 1001
>emb|X98422.1|MSP5CS2 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-2 Length = 1250 Score = 77.8 bits (39), Expect = 5e-11 Identities = 80/94 (85%) Strand = Plus / Minus Query: 454 cttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtactcgca 513 ||||| || ||||| ||||| || ||||| || |||||||| ||||||||||||| ||| Sbjct: 704 cttattccnacctctgcaccaagcccaaatcgtgccccatcgcaaaatcttgtacttgca 645 Query: 514 ttgtataatacggcagcactatcaacttgacgta 547 |||| ||||| |||||||| ||||||||||||| Sbjct: 644 ttgtggaatacagcagcactgtcaacttgacgta 611 Score = 46.1 bits (23), Expect = 0.16 Identities = 62/75 (82%) Strand = Plus / Minus Query: 612 atgtatatggtcaattgctgattgtacatcatcaactatctcaactgtgcaagccataga 671 |||||| ||||||||||| | | |||||||||||| || |||| ||| ||||||| || Sbjct: 546 atgtatgtggtcaattgcagcatatacatcatcaacaatttcaattgtacaagccagtga 487 Query: 672 actgtactccagatg 686 || ||||||||||| Sbjct: 486 gctatactccagatg 472
>gb|AF022914.1|AF022914 Triticum aestivum pyrroline-5-carboxylate synthetase mRNA, partial cds Length = 452 Score = 77.8 bits (39), Expect = 5e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 585 acaatctgtatgtgcacttccatagcgatgtatatggtcaattgctgattgtacatcatc 644 ||||||||| |||||||||||||| |||| |||||||||||| ||||| || |||||||| Sbjct: 360 acaatctgtgtgtgcacttccataacgatttatatggtcaatcgctgactgcacatcatc 301 Query: 645 aac 647 ||| Sbjct: 300 aac 298
>gb|AY492005.1| Glycine max delta-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2148 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 450 tgtacttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtact 509 ||||||||| |||||||| ||||| |||||||| || ||||||||| ||||||||||| Sbjct: 2016 tgtacttattccaacctctgcacctagtccaaatcgtgccccatcactgaatcttgtact 1957 Query: 510 cgcattgtataatacggcagcactatcaacttgacgtagaaa 551 ||||||| || || |||||||| || ||||| |||||||| Sbjct: 1956 agcattgtggaaaacagcagcactgtctacttggcgtagaaa 1915 Score = 54.0 bits (27), Expect = 7e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 587 aatctgtatgtgcacttccatagcgatgtatatggtcaattgctgattgtacatcatcaa 646 |||| ||||||||||||||||| ||| |||||| ||||| |||| | |||||||| | Sbjct: 1879 aatcagtatgtgcacttccataaagatttatatgatcaatagctgcataaacatcatcca 1820 Query: 647 ctatctcaactgtgcaagccatagaactgtactccagatgtaa 689 | || ||||||||||| |||| ||| ||||||| ||||||| Sbjct: 1819 caatttcaactgtgcatgccaacgaattgtactcatgatgtaa 1777
>emb|AJ005686.1|VVI5686 Vitis vinifera mRNA for pyrroline-5-carboxylate synthetase (delta 1 type) Length = 2374 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 475 agtccaaagcgagccccatcagaaaatcttgtactcgcattgtataatacggcagcacta 534 |||||||| |||||||||||| |||||||||| || ||||||| || || ||||||||| Sbjct: 2041 agtccaaaacgagccccatcacaaaatcttgtgctagcattgtgaaagacagcagcacta 1982 Query: 535 tcaacttg 542 |||||||| Sbjct: 1981 tcaacttg 1974 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 595 tgtgcacttccatagcgatgtatatggtcaattgctgattgtacatcatcaactatctca 654 ||||||||||||| || || ||||| ||||| || || |||||||||||||| |||||| Sbjct: 1924 tgtgcacttccatgtcggtgaatatgatcaatggcagaatgtacatcatcaacaatctca 1865 Query: 655 actgtgcaagccat 668 || ||||||||||| Sbjct: 1864 acagtgcaagccat 1851
>gb|U60267.1|SLU60267 Solanum lycopersicum delta 1-pyrroline-5-carboxylate synthetase (tomPRO2) mRNA, complete cds Length = 2239 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 412 ccttcaacacccacgggtccacgtgcatgtatacggcctgtacttatgccaacctcagca 471 |||||||| || || || ||||| ||||| ||||| || ||||| ||||| ||||| ||| Sbjct: 2097 ccttcaactccaactgggccacgagcatgaatacgaccagtactaatgcccacctctgca 2038 Query: 472 cccagtccaaagcgagccccatcagaaaatcttgtactcgcattgtataatacggcagca 531 || ||||||||||| |||||| |||||||||||| || |||| ||||| |||||| Sbjct: 2037 ccaagtccaaagcggaatccatcactaaatcttgtacttgcgttgtgaaatacagcagca 1978 Query: 532 ctatcaacttgacgta 547 || ||||| ||||||| Sbjct: 1977 ctgtcaacctgacgta 1962
>gb|AF503911.1| Suaeda maritima subsp. salsa delta 1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, partial cds Length = 967 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 460 ccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtactcgcattgtat 519 |||||||||||||||| ||||| |||||||| ||| ||||||| || || ||||||| Sbjct: 534 ccaacctcagcacccaacccaaaacgagccccgtcacaaaatctcgtgcttgcattgtga 475 Query: 520 aatacggcagcactatcaacttg 542 ||||| ||||||||||| ||||| Sbjct: 474 aatacagcagcactatctacttg 452 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 583 acacaatctgtatgtgcacttccat 607 |||||||| |||||||||||||||| Sbjct: 411 acacaatcagtatgtgcacttccat 387
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 601 cttccatagcgatgtatatggtcaattgctgattgtacatcatcaac 647 ||||||||||||| |||||||||||||||||| || ||||||||||| Sbjct: 36432104 cttccatagcgatttatatggtcaattgctgactgcacatcatcaac 36432058 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 acctcagcacccagtccaaagcgagccccatca 495 ||||||||||| || |||||||||||||||||| Sbjct: 36432476 acctcagcacctagaccaaagcgagccccatca 36432444
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 601 cttccatagcgatgtatatggtcaattgctgattgtacatcatcaac 647 ||||||||||||| |||||||||||||||||| || ||||||||||| Sbjct: 83943 cttccatagcgatttatatggtcaattgctgactgcacatcatcaac 83897 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 acctcagcacccagtccaaagcgagccccatca 495 ||||||||||| || |||||||||||||||||| Sbjct: 84315 acctcagcacctagaccaaagcgagccccatca 84283
>emb|AJ278818.1|MTR278818 Medicago truncatula mRNA for pyrroline-5-carboxylate synthetase 1 (p5CS1 gene) Length = 2520 Score = 61.9 bits (31), Expect = 3e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 587 aatctgtatgtgcacttccatagcgatgtatatggtcaattgctgattgtacatcatcaa 646 |||| ||||||||||||||||| |||| |||||| ||||| |||| | |||||||| | Sbjct: 1949 aatcggtatgtgcacttccataacgatttatatgatcaatagctgcataaacatcatcca 1890 Query: 647 ctatctcaactgtgcaagccatagaactgtactccagatgtaatgaa 693 | || || || |||||||||| |||| |||||| ||||||||||| Sbjct: 1889 caatttccacggtgcaagccaacgaacagtactcgtgatgtaatgaa 1843 Score = 52.0 bits (26), Expect = 0.003 Identities = 83/102 (81%) Strand = Plus / Minus Query: 450 tgtacttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtact 509 ||||||||| |||||||| || || | |||||| || || ||||| ||||||||||| Sbjct: 2086 tgtacttattccaacctctgcgcctaatccaaatcgtgctccatcgctgaatcttgtact 2027 Query: 510 cgcattgtataatacggcagcactatcaacttgacgtagaaa 551 ||||||| || || ||||||||||| |||||||| ||||| Sbjct: 2026 agcattgtgaaaaacagcagcactatcgacttgacgaagaaa 1985
>dbj|AB097403.1| Raphanus sativus P5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, partial cds Length = 712 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 421 cccacgggtccacgtgcatgtatacggcctgtacttatgccaacctcagcacccagtcca 480 ||||| || ||||| ||||| || | |||||| ||||| |||||||||||||| |||||| Sbjct: 675 cccactggaccacgggcatggatcctgcctgtgcttatcccaacctcagcaccaagtcca 616 Query: 481 aagcgagccccatcagaaaatcttgt 506 || ||| |||||||| |||||||| Sbjct: 615 aatcgaaaaccatcagagaatcttgt 590
>dbj|AK120668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C21, full insert sequence Length = 3713 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 463 acctcagcacccagtccaaagcgagccccatca 495 ||||||||||| || |||||||||||||||||| Sbjct: 3444 acctcagcacctagaccaaagcgagccccatca 3476
>dbj|AP004477.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT12K07, TM0011b, complete sequence Length = 44662 Score = 48.1 bits (24), Expect = 0.041 Identities = 66/80 (82%) Strand = Plus / Plus Query: 601 cttccatagcgatgtatatggtcaattgctgattgtacatcatcaactatctcaactgtg 660 |||||||| ||| |||||| ||||| |||| || |||||||| || || ||||| ||| Sbjct: 21160 cttccataaagatttatatgatcaatagctgcatgcacatcatccacaatttcaacagtg 21219 Query: 661 caagccatagaactgtactc 680 ||||||| ||||||||||| Sbjct: 21220 caagccaatgaactgtactc 21239
>ref|XM_421835.1| PREDICTED: Gallus gallus similar to Pyrroline-5-carboxylate synthetase (LOC423976), mRNA Length = 1951 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 400 gtagtcaagagaccttcaacacccacgggtccacgtgcatgtatacggcctgtacttatg 459 ||||| ||||| ||||||| || || |||||||||||||| ||||| ||||| || Sbjct: 1133 gtagttaagagtccttcaattcctactggtccacgtgcatggatacgagaagtactaatt 1074 Query: 460 ccaacctcagcacccagtccaaa 482 ||||| |||||||| |||||||| Sbjct: 1073 ccaacttcagcaccaagtccaaa 1051
>gb|AF314811.1|AF314811 Brassica napus delta 1-pyrroline-5-carboxylate synthetase A mRNA, complete cds Length = 2551 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 448 cctgtacttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgt 506 ||||| ||||| || ||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 2111 cctgtgcttatccccacctcagcaccaagtccaaatcgaaaaccatcagagaatcttgt 2053
>gb|AF067967.1|AF067967 Mesembryanthemum crystallinum pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2992 Score = 46.1 bits (23), Expect = 0.16 Identities = 74/91 (81%) Strand = Plus / Minus Query: 450 tgtacttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtact 509 ||||||||| |||||||| ||||||| |||||| || |||||| | ||||||||||| Sbjct: 2207 tgtacttattccaacctcggcacccaatccaaaacggaatccatcacagaatcttgtact 2148 Query: 510 cgcattgtataatacggcagcactatcaact 540 ||||| | | ||| |||||||| |||||| Sbjct: 2147 tgcattatgaagtacagcagcactgtcaact 2117
>gb|AC109351.3| Homo sapiens BAC clone RP11-417M17 from 4, complete sequence Length = 133157 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 193 tttgtacaaattaattaatcca 214 |||||||||||||||||||||| Sbjct: 31932 tttgtacaaattaattaatcca 31911
>gb|M92276.1|VIRPYRR Vigna aconitifolia pyrroline-5-carboxylate synthetase associated mRNA sequence Length = 2417 Score = 44.1 bits (22), Expect = 0.64 Identities = 91/114 (79%) Strand = Plus / Minus Query: 587 aatctgtatgtgcacttccatagcgatgtatatggtcaattgctgattgtacatcatcaa 646 |||| ||||||||||||||||| ||| |||||| ||||| |||| | || ||||| | Sbjct: 1918 aatcagtatgtgcacttccatacagatttatatgatcaatagctgcatacacgtcatcca 1859 Query: 647 ctatctcaactgtgcaagccatagaactgtactccagatgtaatgaatctgctt 700 | || || | |||||||||| ||||||||||| |||| ||||||| ||||| Sbjct: 1858 caatttcggcggtgcaagccagcgaactgtactcatgatgaaatgaatgtgctt 1805
>emb|AL356094.11| Human DNA sequence from clone RP11-64I5 on chromosome 6, complete sequence Length = 157588 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 tgaaataatcatatttcagag 286 ||||||||||||||||||||| Sbjct: 11415 tgaaataatcatatttcagag 11395
>emb|X98421.1|MSP5CS1 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-1 Length = 2603 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 499 aatcttgtactcgcattgtataatacggcagcactatcaacttgacgtagaaa 551 ||||||||||| ||||||| || || |||||||| || |||||||| ||||| Sbjct: 2132 aatcttgtactagcattgtgaaaaacagcagcactgtcgacttgacgaagaaa 2080
>gb|AC101940.17| Mus musculus chromosome 3, clone RP24-111E3, complete sequence Length = 157242 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 atggtttgtacaaattaatta 209 ||||||||||||||||||||| Sbjct: 124403 atggtttgtacaaattaatta 124423
>gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, complete sequence Length = 209278 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 atggtttgtacaaattaatta 209 ||||||||||||||||||||| Sbjct: 153862 atggtttgtacaaattaatta 153842
>gb|AC006369.3| Homo sapiens BAC clone RP11-278G12 from 2, complete sequence Length = 188359 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 268 aaataatcatatttcagagggtttt 292 ||||||||| ||||||||||||||| Sbjct: 56941 aaataatcagatttcagagggtttt 56965
>emb|AL831715.7| Mouse DNA sequence from clone RP23-48E15 on chromosome X, complete sequence Length = 163675 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gcattgcagatgctgctggat 46 ||||||||||||||||||||| Sbjct: 56400 gcattgcagatgctgctggat 56380
>gb|AC163686.3| Mus musculus BAC clone RP23-3C10 from chromosome 6, complete sequence Length = 209207 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tcagttccctttccttgtaa 260 |||||||||||||||||||| Sbjct: 52315 tcagttccctttccttgtaa 52334
>gb|AC046160.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-130F23, complete sequence Length = 214627 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcagttccctttccttgtaa 260 |||||||||||||||||||| Sbjct: 29128 tcagttccctttccttgtaa 29109
>gb|AC130217.4| Mus musculus BAC clone RP23-237P18 from chromosome 13, complete sequence Length = 198116 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 tatatggtcaattgctgatt 634 |||||||||||||||||||| Sbjct: 169124 tatatggtcaattgctgatt 169105
>gb|AC121991.3| Mus musculus BAC clone RP24-299P3 from chromosome 13, complete sequence Length = 157485 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 tatatggtcaattgctgatt 634 |||||||||||||||||||| Sbjct: 149864 tatatggtcaattgctgatt 149883
>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete sequence Length = 168712 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tgaaataatcatatttcaga 285 |||||||||||||||||||| Sbjct: 62673 tgaaataatcatatttcaga 62692
>gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosome 19, complete sequence Length = 160363 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 496 gaaaatcttgtactcgcattgtataata 523 |||||||||| | ||||||||||||||| Sbjct: 69485 gaaaatcttgcagtcgcattgtataata 69458
>gb|AC149546.14| Medicago truncatula clone mth2-70o13, complete sequence Length = 124127 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 atccgatgaaataatcatatttca 283 |||||||||||||| ||||||||| Sbjct: 66184 atccgatgaaataaccatatttca 66161
>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence Length = 144639 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 atccgatgaaataatcatatttca 283 |||||||||||||| ||||||||| Sbjct: 4601 atccgatgaaataaccatatttca 4578
>emb|AL022100.13|HS1059H15 Human DNA sequence from clone RP5-1059H15 on chromosome 1q25 Contains a dynactin 4 pseudogene and the 3' end of a novel gene, complete sequence Length = 93581 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 ttcatcagttccctttcctt 256 |||||||||||||||||||| Sbjct: 18893 ttcatcagttccctttcctt 18912
>emb|AL445563.1|MPULM01 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 1/3 Length = 327650 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 651 ctcaactgtgcaagccatagaact 674 ||||||||||| |||||||||||| Sbjct: 158587 ctcaactgtgctagccatagaact 158564
>gb|AC105416.3| Homo sapiens BAC clone RP11-310A13 from 4, complete sequence Length = 123331 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tcaccattcacaatttgccc 377 |||||||||||||||||||| Sbjct: 21399 tcaccattcacaatttgccc 21418
>gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, complete sequence Length = 184862 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 catccttgtcaccattcacaattt 373 ||||| |||||||||||||||||| Sbjct: 65921 catccctgtcaccattcacaattt 65898
>gb|AC018608.9|AC018608 Homo sapiens chromosome 8, clone RP11-403P13, complete sequence Length = 200863 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ctctgctactgtatcatctg 574 |||||||||||||||||||| Sbjct: 36175 ctctgctactgtatcatctg 36156
>gb|AF314812.1|AF314812 Brassica napus delta 1-pyrroline-5-carboxylate synthetase B mRNA, complete cds Length = 2529 Score = 40.1 bits (20), Expect = 9.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 454 cttatgccaacctcagcacccagtccaaagcgagccccatcagaaaatcttgtactcgca 513 ||||| || ||||||||||| |||||||| ||| |||||| | |||||||| || ||| Sbjct: 2134 cttattcccacctcagcaccaagtccaaatcgaaaaccatcacagaatcttgtgcttgca 2075 Query: 514 ttgt 517 |||| Sbjct: 2074 ttgt 2071
>gb|AC062031.7| Homo sapiens BAC clone RP11-474G7 from 2, complete sequence Length = 172792 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgtacaaattaattaatcca 214 |||||||||||||||||||| Sbjct: 97890 tgtacaaattaattaatcca 97871
>dbj|AP001666.1| Homo sapiens genomic DNA, chromosome 21q, section 10/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 atgaaataatcatatttcag 284 |||||||||||||||||||| Sbjct: 255447 atgaaataatcatatttcag 255466
>emb|AL607145.28| Mouse DNA sequence from clone RP23-230I5 on chromosome 4, complete sequence Length = 147896 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 ggtctctgctactgtatcat 571 |||||||||||||||||||| Sbjct: 18961 ggtctctgctactgtatcat 18980
>dbj|AP001343.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B649M24, LL56-APP region, complete sequence Length = 58286 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 atgaaataatcatatttcag 284 |||||||||||||||||||| Sbjct: 54686 atgaaataatcatatttcag 54705 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,588,746 Number of Sequences: 3902068 Number of extensions: 5588746 Number of successful extensions: 127550 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 127360 Number of HSP's gapped (non-prelim): 182 length of query: 724 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 701 effective length of database: 17,143,297,704 effective search space: 12017451690504 effective search space used: 12017451690504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)