ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags33p10 |
|---|---|
| Clone Library Name | barley_pub |
>PSC13_MAIZE (P33050) Pollen-specific protein C13 precursor| Length = 170 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -3 Query: 253 ASNVRLANALGFXKDTPLXACAQILKMYEEVDD 155 + ++R AN LG+ KD PL CA +LK + DD Sbjct: 135 SDSLRPANPLGYFKDVPLPVCAALLKQLDSDDD 167
>CHE1_CHEAL (Q8LGR0) Pollen allergen Che a 1 precursor| Length = 168 Score = 33.9 bits (76), Expect = 0.11 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -3 Query: 253 ASNVRLANALGFXKDTPLXACAQILKMYEEVD 158 AS++R ANALGF + PL C ++LK + D Sbjct: 133 ASDIRSANALGFMRKEPLKECPEVLKELDLYD 164
>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein| 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Fragment) Length = 191 Score = 31.2 bits (69), Expect = 0.73 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C++SCC C S+ QP+ S+ C Q CC Sbjct: 26 CVSSCCRPQCCQSVCC---QPTCSRPSCCQTTCC 56 Score = 28.5 bits (62), Expect = 4.8 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 CI+SCC C S S K +C Q VCC Sbjct: 101 CISSCCRPSCCVS--------SCCKPQCCQSVCC 126
>OLEE1_BETVE (O49813) Olee1-like protein precursor| Length = 166 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = -3 Query: 244 VRLANALGFXKDTPLXACAQILK 176 VRLAN LGF K PL CA+ L+ Sbjct: 133 VRLANPLGFMKKKPLPECAKALR 155
>XKR8_PANTR (Q49LS0) XK-related protein 8| Length = 395 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -2 Query: 209 HPSXCMRADPQDVRGGRRPRLSTPNSLSQNRLMYH 105 HPS C + DP V G R L QNR M H Sbjct: 342 HPSCCWKPDPDQVDGARSLLSPEGYQLPQNRRMTH 376
>XKR8_HUMAN (Q9H6D3) XK-related protein 8| Length = 395 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -2 Query: 209 HPSXCMRADPQDVRGGRRPRLSTPNSLSQNRLMYH 105 HPS C + DP V G R L QNR M H Sbjct: 342 HPSCCWKPDPDQVDGARSLLSPEGYQLPQNRRMTH 376
>KRA44_HUMAN (Q9BYR3) Keratin-associated protein 4-4 (Keratin-associated protein| 4.4) (Ultrahigh sulfur keratin-associated protein 4.4) Length = 166 Score = 30.0 bits (66), Expect = 1.6 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C++SCC C S+ QP+ + +C Q CC Sbjct: 66 CVSSCCRPQCCQSVCC---QPTCCRPQCCQTTCC 96
>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated| protein 4.12) (Ultrahigh sulfur keratin-associated protein 4.12) Length = 201 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C++SCC C S+ QP+ + C Q CC Sbjct: 81 CVSSCCRPQCCQSVCC---QPTCCRPSCCQTTCC 111 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C++SCC C S+ QP+ + C Q CC Sbjct: 41 CVSSCCRPQCCQSVCC---QPTCCRPSCCQTTCC 71
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 29.3 bits (64), Expect = 2.8 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C T+CC C TS QPS C Q CC Sbjct: 62 CRTTCCQPTCVTSCC----QPSCCSTPCCQPTCC 91
>KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-associated| protein 4.14) (Ultrahigh sulfur keratin-associated protein 4.14) Length = 195 Score = 29.3 bits (64), Expect = 2.8 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 139 RIRYHKTG*CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 R Y + C++SCC C S+ QP+ + RC CC Sbjct: 36 RTTYCRPSCCVSSCCRPQCCQSVCC---QPTCCRPRCCISSCC 75
>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein| 9.3) (Ultrahigh sulfur keratin-associated protein 9.3) Length = 159 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C T+CC C TS QPS C Q CC Sbjct: 57 CRTTCCQPICVTSC----CQPSCCSTPCCQPTCC 86
>KR410_HUMAN (Q9BYQ7) Keratin-associated protein 4-10 (Keratin-associated| protein 4.10) (Ultrahigh sulfur keratin-associated protein 4.10) Length = 127 Score = 28.9 bits (63), Expect = 3.6 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C T+CC C S +PS S+ C Q CC Sbjct: 30 CQTTCCCPSCVVSSCC---RPSCSQTTCCQTTCC 60
>KRA42_HUMAN (Q9BYR5) Keratin-associated protein 4-2 (Keratin-associated protein| 4.2) (Ultrahigh sulfur keratin-associated protein 4.2) Length = 136 Score = 28.5 bits (62), Expect = 4.8 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C++SCC C S+ QP+ C Q CC Sbjct: 41 CVSSCCRPQCCQSVCC---QPTCCSPSCCQTTCC 71
>KRA48_HUMAN (Q9BYQ9) Keratin-associated protein 4-8 (Keratin-associated protein| 4.8) (Ultrahigh sulfur keratin-associated protein 4.8) (Fragment) Length = 114 Score = 28.5 bits (62), Expect = 4.8 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 CI+SCC C S S K +C Q VCC Sbjct: 24 CISSCCRPSCCVS--------SCCKPQCCQSVCC 49
>KR413_HUMAN (Q9BYU7) Keratin-associated protein 4-13 (Keratin-associated| protein 4.13) (Ultrahigh sulfur keratin-associated protein 4.13) Length = 106 Score = 28.5 bits (62), Expect = 4.8 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 139 RIRYHKTG*CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 R Y +T C T+CC C +PS + +C Q VCC Sbjct: 22 RPSYCQTTCCRTTCCRPSCC--------RPSCCRPQCCQSVCC 56
>RNF38_HUMAN (Q9H0F5) RING finger protein 38| Length = 515 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 227 SGVXEGHPSXCMRADPQDVRGGRRPRLSTPNSLSQNRLMYH 105 SG P+ R+ P + GRR RLS NS+SQ+ +H Sbjct: 106 SGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHH 146
>RNF38_MOUSE (Q8BI21) RING finger protein 38| Length = 518 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 227 SGVXEGHPSXCMRADPQDVRGGRRPRLSTPNSLSQNRLMYH 105 SG P+ R+ P + GRR RLS NS+SQ+ +H Sbjct: 109 SGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHH 149
>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein| 4.7) (Ultrahigh sulfur keratin-associated protein 4.7) Length = 210 Score = 28.1 bits (61), Expect = 6.2 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 CI+SCC C S S K +C Q VCC Sbjct: 80 CISSCCRPSCCMS--------SCCKPQCCQSVCC 105 Score = 28.1 bits (61), Expect = 6.2 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = -3 Query: 112 CITSCCVKXCXTSIYM*YYQPSTSKYRCLQYVCC 11 C++SCC C S+ QP+ + C + CC Sbjct: 45 CVSSCCRPQCCQSVCC---QPTCCRPSCCETTCC 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,315,625 Number of Sequences: 219361 Number of extensions: 386571 Number of successful extensions: 772 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 724 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 768 length of database: 80,573,946 effective HSP length: 61 effective length of database: 67,192,925 effective search space used: 1612630200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
