>ref|NM_185021.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1427

 Score =  172 bits (87), Expect = 7e-40
 Identities = 145/165 (87%)
 Strand = Plus / Minus

                                                                        
Query: 353  agactcaatgatcctgtacatccatcggtcgagcattcctgtcattgcaaatgtaccccc 412
            ||||||||| | || ||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 1158 agactcaataagccggtacatccatcggtcaagcattcctgtcattgcaaaggtaccgcc 1099

                                                                        
Query: 413  aagaactgcacagaggcggtttatgaaatgtangaagttccntctttcttctctgatggt 472
            |||||||||||| || ||| | | |||||| | |||||||| |||||||||| |||| ||
Sbjct: 1098 aagaactgcacatagtcgggtgaggaaatgcaggaagttccttctttcttctttgattgt 1039

                                                         
Query: 473  gactgtgattggtgagagatcatacaggaagtaaacggctggcca 517
            |||||| ||||||||||||||||||| |||||| || ||||||||
Sbjct: 1038 gactgtaattggtgagagatcatacaagaagtacacagctggcca 994

>dbj|AK103474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130D12, full
            insert sequence
          Length = 1520

 Score =  172 bits (87), Expect = 7e-40
 Identities = 145/165 (87%)
 Strand = Plus / Minus

                                                                        
Query: 353  agactcaatgatcctgtacatccatcggtcgagcattcctgtcattgcaaatgtaccccc 412
            ||||||||| | || ||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 1162 agactcaataagccggtacatccatcggtcaagcattcctgtcattgcaaaggtaccgcc 1103

                                                                        
Query: 413  aagaactgcacagaggcggtttatgaaatgtangaagttccntctttcttctctgatggt 472
            |||||||||||| || ||| | | |||||| | |||||||| |||||||||| |||| ||
Sbjct: 1102 aagaactgcacatagtcgggtgaggaaatgcaggaagttccttctttcttctttgattgt 1043

                                                         
Query: 473  gactgtgattggtgagagatcatacaggaagtaaacggctggcca 517
            |||||| ||||||||||||||||||| |||||| || ||||||||
Sbjct: 1042 gactgtaattggtgagagatcatacaagaagtacacagctggcca 998

>dbj|AK062053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B12, full
           insert sequence
          Length = 550

 Score =  172 bits (87), Expect = 7e-40
 Identities = 145/165 (87%)
 Strand = Plus / Minus

                                                                       
Query: 353 agactcaatgatcctgtacatccatcggtcgagcattcctgtcattgcaaatgtaccccc 412
           ||||||||| | || ||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 281 agactcaataagccggtacatccatcggtcaagcattcctgtcattgcaaaggtaccgcc 222

                                                                       
Query: 413 aagaactgcacagaggcggtttatgaaatgtangaagttccntctttcttctctgatggt 472
           |||||||||||| || ||| | | |||||| | |||||||| |||||||||| |||| ||
Sbjct: 221 aagaactgcacatagtcgggtgaggaaatgcaggaagttccttctttcttctttgattgt 162

                                                        
Query: 473 gactgtgattggtgagagatcatacaggaagtaaacggctggcca 517
           |||||| ||||||||||||||||||| |||||| || ||||||||
Sbjct: 161 gactgtaattggtgagagatcatacaagaagtacacagctggcca 117

>gb|BT019027.1| Zea mays clone Contig532.F mRNA sequence
          Length = 1303

 Score =  155 bits (78), Expect = 2e-34
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                       
Query: 368 gtacatccatcggtcgagcattcctgtcattgcaaatgtacccccaagaactgcacagag 427
           ||||||||| ||||| |||||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 920 gtacatccaccggtcaagcattcctgtcatggcaaatgtgccaccaagaactgcacatag 861

                                                                       
Query: 428 gcggtttatgaaatgtangaagttccntctttcttctctgatggtgactgtgattggtga 487
            ||  |||  ||||| | |||||||| |||||| ||| ||||||||||||| ||||||||
Sbjct: 860 acgagttacaaaatgaaggaagttccttctttcctctttgatggtgactgtaattggtga 801

                                           
Query: 488 gagatcatacaggaagtaaacggctggccagg 519
            |||||||||||||||||||| ||||||||||
Sbjct: 800 cagatcatacaggaagtaaaccgctggccagg 769

>gb|BT018471.1| Zea mays clone EL01N0422D05.d mRNA sequence
          Length = 1430

 Score =  155 bits (78), Expect = 2e-34
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtacatccatcggtcgagcattcctgtcattgcaaatgtacccccaagaactgcacagag 427
            ||||||||| ||||| |||||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 1099 gtacatccaccggtcaagcattcctgtcatggcaaatgtgccaccaagaactgcacatag 1040

                                                                        
Query: 428  gcggtttatgaaatgtangaagttccntctttcttctctgatggtgactgtgattggtga 487
             ||  |||  ||||| | |||||||| |||||| ||| ||||||||||||| ||||||||
Sbjct: 1039 acgagttacaaaatgaaggaagttccttctttcctctttgatggtgactgtaattggtga 980

                                            
Query: 488  gagatcatacaggaagtaaacggctggccagg 519
             |||||||||||||||||||| ||||||||||
Sbjct: 979  cagatcatacaggaagtaaaccgctggccagg 948

>gb|AY105967.1| Zea mays PCO133275 mRNA sequence
          Length = 1314

 Score =  155 bits (78), Expect = 2e-34
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtacatccatcggtcgagcattcctgtcattgcaaatgtacccccaagaactgcacagag 427
            ||||||||| ||||| |||||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 1196 gtacatccaccggtcaagcattcctgtcatggcaaatgtgccaccaagaactgcacatag 1137

                                                                        
Query: 428  gcggtttatgaaatgtangaagttccntctttcttctctgatggtgactgtgattggtga 487
             ||  |||  ||||| | |||||||| |||||| ||| ||||||||||||| ||||||||
Sbjct: 1136 acgagttacaaaatgaaggaagttccttctttcctctttgatggtgactgtaattggtga 1077

                                            
Query: 488  gagatcatacaggaagtaaacggctggccagg 519
             |||||||||||||||||||| ||||||||||
Sbjct: 1076 cagatcatacaggaagtaaaccgctggccagg 1045

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 2e-25
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                            
Query: 385      gcattcctgtcattgcaaatgtacccccaagaactgcacagaggcggtttatgaaatgta 444
                |||| |||||||||||||| ||||| |||||||||||||| || ||| | | |||||| |
Sbjct: 32255640 gcatacctgtcattgcaaaggtaccgccaagaactgcacatagtcgggtgaggaaatgca 32255581

                                                                            
Query: 445      ngaagttccntctttcttctctgatggtgactgtgattggtgagagatcatacaggaagt 504
                 |||||||| |||||||||| |||| |||||||| ||||||||||||||||||| |||||
Sbjct: 32255580 ggaagttccttctttcttctttgattgtgactgtaattggtgagagatcatacaagaagt 32255521

                 
Query: 505      a 505
                |
Sbjct: 32255520 a 32255520



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 353      agactcaatgatcctgtacatccatcggtcgagcattcctgt 394
                ||||||||| | || ||||||||||||||| |||||||||||
Sbjct: 32255863 agactcaataagccggtacatccatcggtcaagcattcctgt 32255822

>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete
              sequence
          Length = 129778

 Score =  125 bits (63), Expect = 2e-25
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                          
Query: 385    gcattcctgtcattgcaaatgtacccccaagaactgcacagaggcggtttatgaaatgta 444
              |||| |||||||||||||| ||||| |||||||||||||| || ||| | | |||||| |
Sbjct: 107314 gcatacctgtcattgcaaaggtaccgccaagaactgcacatagtcgggtgaggaaatgca 107255

                                                                          
Query: 445    ngaagttccntctttcttctctgatggtgactgtgattggtgagagatcatacaggaagt 504
               |||||||| |||||||||| |||| |||||||| ||||||||||||||||||| |||||
Sbjct: 107254 ggaagttccttctttcttctttgattgtgactgtaattggtgagagatcatacaagaagt 107195

               
Query: 505    a 505
              |
Sbjct: 107194 a 107194



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                        
Query: 353    agactcaatgatcctgtacatccatcggtcgagcattcctgt 394
              ||||||||| | || ||||||||||||||| |||||||||||
Sbjct: 107537 agactcaataagccggtacatccatcggtcaagcattcctgt 107496

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 2e-25
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                            
Query: 385      gcattcctgtcattgcaaatgtacccccaagaactgcacagaggcggtttatgaaatgta 444
                |||| |||||||||||||| ||||| |||||||||||||| || ||| | | |||||| |
Sbjct: 32346152 gcatacctgtcattgcaaaggtaccgccaagaactgcacatagtcgggtgaggaaatgca 32346093

                                                                            
Query: 445      ngaagttccntctttcttctctgatggtgactgtgattggtgagagatcatacaggaagt 504
                 |||||||| |||||||||| |||| |||||||| ||||||||||||||||||| |||||
Sbjct: 32346092 ggaagttccttctttcttctttgattgtgactgtaattggtgagagatcatacaagaagt 32346033

                 
Query: 505      a 505
                |
Sbjct: 32346032 a 32346032



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 353      agactcaatgatcctgtacatccatcggtcgagcattcctgt 394
                ||||||||| | || ||||||||||||||| |||||||||||
Sbjct: 32346375 agactcaataagccggtacatccatcggtcaagcattcctgt 32346334

>gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete sequence
          Length = 85986

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   gttatagatgcatggactgga 186
             |||||||||||||||||||||
Sbjct: 35274 gttatagatgcatggactgga 35254

>ref|XM_638364.1| Dictyostelium discoideum putative protein kinase (DDB0216322),
            partial mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  atatcttttaagttatagat 174
            ||||||||||||||||||||
Sbjct: 2309 atatcttttaagttatagat 2290

>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence
          Length = 213736

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 352    tagactcaatgatcctgtacatcc 375
              ||||||||||||||||||| ||||
Sbjct: 130352 tagactcaatgatcctgtaaatcc 130375

>ref|XM_801943.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507807.40) partial mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 456 ctttcttctctgatggtgactgtg 479
           |||||||| |||||||||||||||
Sbjct: 181 ctttcttcgctgatggtgactgtg 158

>emb|AL354864.16| Human DNA sequence from clone RP11-435D7 on chromosome 1 Contains the 5'
              end of the PSMB2 gene for proteasome (prosome, macropain)
              subunit, beta type, 2, a novel transcript (FLJ38984), a
              putative novel transcript, the CLSPN gene for claspin
              homolog (Xenopus laevis) and the 5' end of the EIF2C4 gene
              for eukaryotic translation initiation factor 2C, 4,
              complete sequence
          Length = 194296

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    atatcttttaagttatagat 174
              ||||||||||||||||||||
Sbjct: 171711 atatcttttaagttatagat 171730

>gb|AC025186.6| Homo sapiens chromosome 5 clone CTD-2375G15, complete sequence
          Length = 146802

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   gagatcatacaggaagtaaa 507
             ||||||||||||||||||||
Sbjct: 23384 gagatcatacaggaagtaaa 23403

>gb|AC025176.5| Homo sapiens chromosome 5 clone CTD-2116N20, complete sequence
          Length = 104972

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   gagatcatacaggaagtaaa 507
             ||||||||||||||||||||
Sbjct: 97232 gagatcatacaggaagtaaa 97251

>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614)
              strain AX4, complete sequence
          Length = 182870

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    atatcttttaagttatagat 174
              ||||||||||||||||||||
Sbjct: 123283 atatcttttaagttatagat 123264

>gb|AC021049.12| Homo sapiens 12 BAC RP11-904M10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175315

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   acttgactggccacagggta 280
             ||||||||||||||||||||
Sbjct: 58191 acttgactggccacagggta 58210

>emb|BX294666.6| Zebrafish DNA sequence from clone CH211-251M11 in linkage group 10,
             complete sequence
          Length = 184574

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   tgattaatcataagactaaaacca 155
             ||||||||||| ||||||||||||
Sbjct: 65652 tgattaatcatcagactaaaacca 65629


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,551,168
Number of Sequences: 3902068
Number of extensions: 3551168
Number of successful extensions: 60601
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60542
Number of HSP's gapped (non-prelim): 59
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)