| Clone Name | rbags34e12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146N15, full insert sequence Length = 3120 Score = 404 bits (204), Expect = e-109 Identities = 354/404 (87%) Strand = Plus / Minus Query: 282 aggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctccgcgccc 341 |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 2817 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 2758 Query: 342 gcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaaggcgatg 401 ||||| || || ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 2757 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 2698 Query: 402 atgttgtcggatccagatagctgagcgaatgggtggtctctattgtacctctgcagttct 461 ||||||||||| || || ||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 2697 atgttgtcggagccggacagctgcgcgaaggggtggtctctcttgtacctctgcagctct 2638 Query: 462 acccttcccttcccgttcagcacgtccaccactccgacgtaccgcagtacttcgcctgca 521 |||| ||||||| |||| |||||||||||| || || |||||||| ||||| |||||| Sbjct: 2637 acccggcccttcctgttcgccacgtccaccacgcccacataccgcagcacttctcctgca 2578 Query: 522 gcctcagcctcatggcgctgtctggcccaatcctggtcaaatgatggtagcttttgcatg 581 || ||||| |||| ||| || ||| |||| ||||| ||||| || |||||||| |||||| Sbjct: 2577 gcttcagcttcatcgcgttgcctgtcccagtcctgatcaaaggacggtagcttctgcatg 2518 Query: 582 aattcatttggcgacgagcatgacttaagtgcctctggcacaaggctctctaccgggata 641 ||||||| || ||||| |||||| | |||||||||||||||||||||| ||| || ||| Sbjct: 2517 aattcatctgctgacgaacatgacctcagtgcctctggcacaaggctctttacgggaata 2458 Query: 642 tctgaaagctcaagtctcaaaccagactcccttgcaaggataat 685 || |||||||| || |||| |||||||||||||||||||||||| Sbjct: 2457 tcggaaagctcgagcctcagaccagactcccttgcaaggataat 2414
>dbj|AK066685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M24, full insert sequence Length = 2328 Score = 404 bits (204), Expect = e-109 Identities = 354/404 (87%) Strand = Plus / Minus Query: 282 aggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctccgcgccc 341 |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 2034 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 1975 Query: 342 gcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaaggcgatg 401 ||||| || || ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1974 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 1915 Query: 402 atgttgtcggatccagatagctgagcgaatgggtggtctctattgtacctctgcagttct 461 ||||||||||| || || ||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 1914 atgttgtcggagccggacagctgcgcgaaggggtggtctctcttgtacctctgcagctct 1855 Query: 462 acccttcccttcccgttcagcacgtccaccactccgacgtaccgcagtacttcgcctgca 521 |||| ||||||| |||| |||||||||||| || || |||||||| ||||| |||||| Sbjct: 1854 acccggcccttcctgttcgccacgtccaccacgcccacataccgcagcacttctcctgca 1795 Query: 522 gcctcagcctcatggcgctgtctggcccaatcctggtcaaatgatggtagcttttgcatg 581 || ||||| |||| ||| || ||| |||| ||||| ||||| || |||||||| |||||| Sbjct: 1794 gcttcagcttcatcgcgttgcctgtcccagtcctgatcaaaggacggtagcttctgcatg 1735 Query: 582 aattcatttggcgacgagcatgacttaagtgcctctggcacaaggctctctaccgggata 641 ||||||| || ||||| |||||| | |||||||||||||||||||||| ||| || ||| Sbjct: 1734 aattcatctgctgacgaacatgacctcagtgcctctggcacaaggctctttacgggaata 1675 Query: 642 tctgaaagctcaagtctcaaaccagactcccttgcaaggataat 685 || |||||||| || |||| |||||||||||||||||||||||| Sbjct: 1674 tcggaaagctcgagcctcagaccagactcccttgcaaggataat 1631
>dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine dehydrogenase, complete cds Length = 3061 Score = 389 bits (196), Expect = e-105 Identities = 352/404 (87%) Strand = Plus / Minus Query: 282 aggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctccgcgccc 341 |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 2784 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 2725 Query: 342 gcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaaggcgatg 401 ||||| || || ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 2724 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 2665 Query: 402 atgttgtcggatccagatagctgagcgaatgggtggtctctattgtacctctgcagttct 461 ||||||||||| || || ||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 2664 atgttgtcggagccggagagctgcgcgaaggggtggtctctcttgtacctctgcagctct 2605 Query: 462 acccttcccttcccgttcagcacgtccaccactccgacgtaccgcagtacttcgcctgca 521 |||| ||||||| |||| |||||||||||| || || |||||||| ||||| |||||| Sbjct: 2604 acccggcccttcctgttcgccacgtccaccacgcccacataccgcagcacttctcctgca 2545 Query: 522 gcctcagcctcatggcgctgtctggcccaatcctggtcaaatgatggtagcttttgcatg 581 || ||||| |||| ||| || ||| |||| ||||| ||||| || |||||||| |||||| Sbjct: 2544 gcttcagcttcatcgcgttgcctgtcccagtcctgatcaaaggacggtagcttctgcatg 2485 Query: 582 aattcatttggcgacgagcatgacttaagtgcctctggcacaaggctctctaccgggata 641 ||||||| || ||||| |||||| | ||||||||||||| ||||||| ||| || ||| Sbjct: 2484 aattcatctgctgacgaacatgacctcagtgcctctggcaacaggctctttacgggaata 2425 Query: 642 tctgaaagctcaagtctcaaaccagactcccttgcaaggataat 685 || |||||||| || |||| |||||||||||||||||||||||| Sbjct: 2424 tcggaaagctcgagcctcagaccagactcccttgcaaggataat 2381
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 260 bits (131), Expect = 5e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 282 aggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctccgcgccc 341 |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 6941170 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 6941229 Query: 342 gcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaaggcgatg 401 ||||| || || ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 6941230 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 6941289 Query: 402 atgttgtcggatccagatagctgagcgaatgggtggtctctattgtacctctgcagttct 461 ||||||||||| || || ||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 6941290 atgttgtcggagccggacagctgcgcgaaggggtggtctctcttgtacctctgcagctct 6941349 Query: 462 acccttcccttcccgttcagcacgtccaccactccgacgtaccgcag 508 |||| ||||||| |||| |||||||||||| || || |||||||| Sbjct: 6941350 acccggcccttcctgttcgccacgtccaccacgcccacataccgcag 6941396 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 609 agtgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaaccagac 668 |||||||||||||||||||||| ||| || ||||| |||||||| || |||| ||||||| Sbjct: 6941805 agtgcctctggcacaaggctctttacgggaatatcggaaagctcgagcctcagaccagac 6941864 Query: 669 tcccttgcaaggataat 685 ||||||||||||||||| Sbjct: 6941865 tcccttgcaaggataat 6941881 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 510 acttcgcctgcagcctcagcctcatggcgctgtctggcccaatcctggtcaaatgatggt 569 ||||| |||||||| ||||| |||| ||| || ||| |||| ||||| ||||| || ||| Sbjct: 6941628 acttctcctgcagcttcagcttcatcgcgttgcctgtcccagtcctgatcaaaggacggt 6941687 Query: 570 agcttttgcatgaattcatttggcgacgagcatgact 606 ||||| ||||||||||||| || ||||| ||||||| Sbjct: 6941688 agcttctgcatgaattcatctgctgacgaacatgact 6941724
>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0044K01 Length = 160643 Score = 260 bits (131), Expect = 5e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 282 aggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctccgcgccc 341 |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 12341 aggtaggacgccagccgcaggatgtcgcagaagacgccaccggcggtgacctccgcgccg 12400 Query: 342 gcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaaggcgatg 401 ||||| || || ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 12401 gcgccggggcctcgcacgatcagcggctgctccttgtacctcgacgtggtgaaggcgatg 12460 Query: 402 atgttgtcggatccagatagctgagcgaatgggtggtctctattgtacctctgcagttct 461 ||||||||||| || || ||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 12461 atgttgtcggagccggacagctgcgcgaaggggtggtctctcttgtacctctgcagctct 12520 Query: 462 acccttcccttcccgttcagcacgtccaccactccgacgtaccgcag 508 |||| ||||||| |||| |||||||||||| || || |||||||| Sbjct: 12521 acccggcccttcctgttcgccacgtccaccacgcccacataccgcag 12567 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 609 agtgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaaccagac 668 |||||||||||||||||||||| ||| || ||||| |||||||| || |||| ||||||| Sbjct: 12976 agtgcctctggcacaaggctctttacgggaatatcggaaagctcgagcctcagaccagac 13035 Query: 669 tcccttgcaaggataat 685 ||||||||||||||||| Sbjct: 13036 tcccttgcaaggataat 13052 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 510 acttcgcctgcagcctcagcctcatggcgctgtctggcccaatcctggtcaaatgatggt 569 ||||| |||||||| ||||| |||| ||| || ||| |||| ||||| ||||| || ||| Sbjct: 12799 acttctcctgcagcttcagcttcatcgcgttgcctgtcccagtcctgatcaaaggacggt 12858 Query: 570 agcttttgcatgaattcatttggcgacgagcatgact 606 ||||| ||||||||||||| || ||||| ||||||| Sbjct: 12859 agcttctgcatgaattcatctgctgacgaacatgact 12895
>gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-homoserine dehydrogenase mRNA, complete cds Length = 3045 Score = 252 bits (127), Expect = 1e-63 Identities = 328/395 (83%) Strand = Plus / Minus Query: 279 ccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctccgcg 338 |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 2784 ccgaggtaagacgccagccgcagaatgtcgcagaagacgccaccggctgtcacctccgcg 2725 Query: 339 cccgcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaaggcg 398 || || || || || ||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 2724 ccggcacccggaccccgcacgatcagcggctgctccttgtacctggacgtggtgaaggcg 2665 Query: 399 atgatgttgtcggatccagatagctgagcgaatgggtggtctctattgtacctctgcagt 458 |||||||||||||| || || ||||| ||||| |||||||| || ||||||| | || Sbjct: 2664 atgatgttgtcggagccggagagctgcgcgaacgggtggtccctcctgtacctgcgtagc 2605 Query: 459 tctacccttcccttcccgttcagcacgtccaccactccgacgtaccgcagtacttcgcct 518 || ||| ||| ||| ||||| | | |||| | |||| ||||| ||||| ||||||||| Sbjct: 2604 tccacctgtccgctcctgttcaccgcatccaacgctccaacgtaacgcaggacttcgcct 2545 Query: 519 gcagcctcagcctcatggcgctgtctggcccaatcctggtcaaatgatggtagcttttgc 578 ||||||||||| ||| ||| || |||||||| |||| ||| || || |||||||| ||| Sbjct: 2544 gcagcctcagcatcactgcgttgcctggcccagtcctcgtcgaaggacggtagcttctgc 2485 Query: 579 atgaattcatttggcgacgagcatgacttaagtgcctctggcacaaggctctctaccggg 638 |||||||||| || ||||||||||| ||||| |||||||||||||||| || || Sbjct: 2484 atgaattcatctgctgacgagcatgatgcaagtgtttctggcacaaggctcttcacagga 2425 Query: 639 atatctgaaagctcaagtctcaaaccagactccct 673 || || ||||| ||||| |||| |||||| ||||| Sbjct: 2424 atgtcagaaagttcaagcctcagaccagattccct 2390
>gb|AY107504.1| Zea mays PCO076481 mRNA sequence Length = 832 Score = 214 bits (108), Expect = 3e-52 Identities = 159/176 (90%) Strand = Plus / Minus Query: 276 gcgccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctcc 335 ||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 579 gcgccaaggtaagacgccagccgcaggatgtcgcagaagacgccacccgcagtcacctcc 520 Query: 336 gcgcccgcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaag 395 |||||||||||||| || |||||||| || |||||||||||||||||||| |||||||| Sbjct: 519 gcgcccgcgcctgggccccgcacgattagcggctgctccttgtacctcgaggtggtgaat 460 Query: 396 gcgatgatgttgtcggatccagatagctgagcgaatgggtggtctctattgtacct 451 ||||||||||||||||| || || ||||| ||||| |||||||| || |||||||| Sbjct: 459 gcgatgatgttgtcggagccggagagctgcgcgaacgggtggtccctcttgtacct 404 Score = 151 bits (76), Expect = 4e-33 Identities = 172/204 (84%) Strand = Plus / Minus Query: 486 tccaccactccgacgtaccgcagtacttcgcctgcagcctcagcctcatggcgctgtctg 545 ||||||||||| ||||| ||||| |||||| ||||||| ||||| ||| ||| || ||| Sbjct: 369 tccaccactccaacgtaacgcaggacttcgtctgcagcatcagcatcactgcgttgcctg 310 Query: 546 gcccaatcctggtcaaatgatggtagcttttgcatgaattcatttggcgacgagcatgac 605 ||||| |||| |||||| ||||||||||| ||||||||||||| || |||||||||| Sbjct: 309 gcccagtcctcgtcaaaggatggtagcttctgcatgaattcatctgctgacgagcatgct 250 Query: 606 ttaagtgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaacca 665 ||||| |||||||||||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 249 gcaagtgtttctggcacaaggctcttcacaggaatatcagaaagttcaagcctcaaacct 190 Query: 666 gactcccttgcaaggataatgacc 689 || ||||||||||||||||||||| Sbjct: 189 gattcccttgcaaggataatgacc 166
>gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-homoserine dehydrogenase mRNA, complete cds Length = 3178 Score = 180 bits (91), Expect = 4e-42 Identities = 157/179 (87%) Strand = Plus / Minus Query: 270 gagggggcgccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtc 329 |||||||| || |||||||| | ||| ||||| |||||||||||||||||||| |||||| Sbjct: 2800 gagggggcaccaaggtaggaagacaggcgcagtatgtcgcagaagacgcctcctgcagtc 2741 Query: 330 acctccgcgcccgcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtg 389 || ||||| || || || || || ||||||||||||||||| |||||||||||||| ||| Sbjct: 2740 acttccgcaccagcccccggaccacgcacgatcagtggctgatccttgtacctcgaggtg 2681 Query: 390 gtgaaggcgatgatgttgtcggatccagatagctgagcgaatgggtggtctctattgta 448 |||||||| |||||||||||||| ||||||||||| ||||| |||||||| || ||||| Sbjct: 2680 gtgaaggctatgatgttgtcggaaccagatagctgcgcgaacgggtggtccctcttgta 2622 Score = 79.8 bits (40), Expect = 1e-11 Identities = 163/204 (79%) Strand = Plus / Minus Query: 486 tccaccactccgacgtaccgcagtacttcgcctgcagcctcagcctcatggcgctgtctg 545 ||||||||||| || |||||||| ||||| || ||||| ||||| | | | || ||| Sbjct: 2584 tccaccactccaacataccgcagaacttctcccgcagcttcagcatttttcctctctctt 2525 Query: 546 gcccaatcctggtcaaatgatggtagcttttgcatgaattcatttggcgacgagcatgac 605 |||||||||| |||||| ||||||| ||| |||||| |||| | | || | |||||| Sbjct: 2524 gcccaatcctcgtcaaaagatggtaacttctgcatgtattcgtcggctgaggtacatgac 2465 Query: 606 ttaagtgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaacca 665 ||||||||||| |||||||| || ||| || ||||| ||||| ||||| | ||||||| Sbjct: 2464 ttaagtgcctccggcacaagacttcgtacaggaatatcagaaagttcaagccccaaacca 2405 Query: 666 gactcccttgcaaggataatgacc 689 || ||||||||||| || |||||| Sbjct: 2404 gattcccttgcaagaattatgacc 2381
>ref|XM_481775.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2766 Score = 178 bits (90), Expect = 2e-41 Identities = 264/322 (81%) Strand = Plus / Minus Query: 267 tatgagggggcgccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggca 326 |||||||| ||||| |||||||| |||||||| || ||||| | |||||| ||||| || Sbjct: 2765 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 2706 Query: 327 gtcacctccgcgcccgcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaa 386 |||||||| || || ||||| || || ||||||||||| || ||||||||||| || || Sbjct: 2705 gtcacctctgcaccggcgcccgggcctcgcacgatcagcggttgctccttgtatcttgac 2646 Query: 387 gtggtgaaggcgatgatgttgtcggatccagatagctgagcgaatgggtggtctctattg 446 || ||||||||||||||||||||||| ||||||||||| ||||| |||||||| | ||| Sbjct: 2645 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcgaacgggtggtccttcttg 2586 Query: 447 tacctctgcagttctacccttcccttcccgttcagcacgtccaccactccgacgtaccgc 506 |||||| |||| || ||| |||| | ||||| || ||||||||||| || |||||| Sbjct: 2585 tacctccgcagctcgacctgaccctccttgttcaccaaatccaccactccaacataccgc 2526 Query: 507 agtacttcgcctgcagcctcagcctcatggcgctgtctggcccaatcctggtcaaatgat 566 | ||||| || ||||| ||||| || | | || ||| ||||| ||||||||||| ||| Sbjct: 2525 aaaacttctccggcagcttcagcatctttactctctcttgcccagtcctggtcaaaggat 2466 Query: 567 ggtagcttttgcatgaattcat 588 |||| |||||||||| |||||| Sbjct: 2465 ggtaacttttgcatgtattcat 2444 Score = 42.1 bits (21), Expect = 2.4 Identities = 57/69 (82%) Strand = Plus / Minus Query: 611 tgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaaccagactc 670 |||||| |||||||| ||| ||| || ||||| ||||||||||| |||| ||||| || Sbjct: 2421 tgcctccggcacaagactccttacaggaatatcagaaagctcaagcttcaatccagattc 2362 Query: 671 ccttgcaag 679 ||| ||||| Sbjct: 2361 cctagcaag 2353
>gb|AY111528.1| Zea mays CL2353_1 mRNA sequence Length = 3153 Score = 172 bits (87), Expect = 1e-39 Identities = 147/167 (88%) Strand = Plus / Minus Query: 282 aggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacctccgcgccc 341 |||||||| | ||| ||||| |||||||||||||||||||| |||||||| ||||| || Sbjct: 2788 aggtaggaagacaggcgcagtatgtcgcagaagacgcctcctgcagtcacttccgcacca 2729 Query: 342 gcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaagtggtgaaggcgatg 401 || || || || ||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 2728 gccccgggacctcgcacgatcagtggctgatccttgtacctcgaggtggtgaaggctatg 2669 Query: 402 atgttgtcggatccagatagctgagcgaatgggtggtctctattgta 448 ||||||||||| ||||||||||| ||||| |||||||| || ||||| Sbjct: 2668 atgttgtcggaaccagatagctgcgcgaacgggtggtccctcttgta 2622 Score = 71.9 bits (36), Expect = 3e-09 Identities = 117/144 (81%) Strand = Plus / Minus Query: 546 gcccaatcctggtcaaatgatggtagcttttgcatgaattcatttggcgacgagcatgac 605 |||||||||| |||||| ||||||| ||| |||||| |||| | | || | |||||| Sbjct: 2524 gcccaatcctcgtcaaaagatggtaacttctgcatgtattcgtcggctgaggtacatgac 2465 Query: 606 ttaagtgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaacca 665 ||||||||||| |||||||| || ||| || ||||| ||||| ||||| | ||||||| Sbjct: 2464 ttaagtgcctccggcacaagacttcgtacaggaatatcagaaagttcaagccccaaacca 2405 Query: 666 gactcccttgcaaggataatgacc 689 || ||||||||||| || |||||| Sbjct: 2404 gattcccttgcaagaattatgacc 2381
>dbj|AK073790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067A07, full insert sequence Length = 2472 Score = 163 bits (82), Expect = 9e-37 Identities = 263/322 (81%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 267 tatgagggggcgccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggca 326 |||||||| ||||| |||||||| |||||||| || ||||| | |||||| ||||| || Sbjct: 2289 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 2230 Query: 327 gtcacctccgcgcccgcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaa 386 |||||||| || || ||||| || || ||| ||||||| || ||||||||||| || || Sbjct: 2229 gtcacctctgcaccggcgcccgggcctcgc-cgatcagcggttgctccttgtatcttgac 2171 Query: 387 gtggtgaaggcgatgatgttgtcggatccagatagctgagcgaatgggtggtctctattg 446 || ||||||||||||||||||||||| ||||||||||| ||||| |||||||| | ||| Sbjct: 2170 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcgaacgggtggtccttcttg 2111 Query: 447 tacctctgcagttctacccttcccttcccgttcagcacgtccaccactccgacgtaccgc 506 |||||| |||| || ||| |||| | ||||| || ||||||||||| || |||||| Sbjct: 2110 tacctccgcagctcgacctgaccctccttgttcaccaaatccaccactccaacataccgc 2051 Query: 507 agtacttcgcctgcagcctcagcctcatggcgctgtctggcccaatcctggtcaaatgat 566 | ||||| || ||||| ||||| || | | || ||| ||||| ||||||||||| ||| Sbjct: 2050 aaaacttctccggcagcttcagcatctttactctctcttgcccagtcctggtcaaaggat 1991 Query: 567 ggtagcttttgcatgaattcat 588 |||| |||||||||| |||||| Sbjct: 1990 ggtaacttttgcatgtattcat 1969
>gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence Length = 3045 Score = 161 bits (81), Expect = 4e-36 Identities = 255/313 (81%) Strand = Plus / Minus Query: 361 tcagtggctgctccttgtacctcgaagtggtgaaggcgatgatgttgtcggatccagata 420 |||| ||||||||||||||||| || |||||||||||||||||||||||||| || || | Sbjct: 2702 tcagcggctgctccttgtacctggacgtggtgaaggcgatgatgttgtcggagccggaga 2643 Query: 421 gctgagcgaatgggtggtctctattgtacctctgcagttctacccttcccttcccgttca 480 |||| ||||| |||||||| || ||||||| | || || ||| ||| ||| ||||| Sbjct: 2642 gctgcgcgaacgggtggtccctcctgtacctgcgtagctccacctgtccgctcctgttca 2583 Query: 481 gcacgtccaccactccgacgtaccgcagtacttcgcctgcagcctcagcctcatggcgct 540 | | |||| | |||| ||||| ||||| |||||||||||||||||||| ||| ||| | Sbjct: 2582 ccgcatccaacgctccaacgtaacgcaggacttcgcctgcagcctcagcatcactgcgtt 2523 Query: 541 gtctggcccaatcctggtcaaatgatggtagcttttgcatgaattcatttggcgacgagc 600 | |||||||| |||| ||| || || |||||||| ||||||||||||| || ||||||| Sbjct: 2522 gcctggcccagtcctcgtcgaaggacggtagcttctgcatgaattcatctgctgacgagc 2463 Query: 601 atgacttaagtgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctca 660 |||| ||||| |||||||||||||||| || || || || ||||| ||||| |||| Sbjct: 2462 atgatgcaagtgtttctggcacaaggctcttcacaggaatgtcagaaagttcaagcctca 2403 Query: 661 aaccagactccct 673 |||||| ||||| Sbjct: 2402 gaccagattccct 2390 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 279 ccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggcagtcacc 332 |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 2784 ccgaggtaagacgccagccgcagaatgtcgcagaagacgccaccggctgtcacc 2731
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 149 bits (75), Expect = 1e-32 Identities = 162/191 (84%) Strand = Plus / Plus Query: 267 tatgagggggcgccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggca 326 |||||||| ||||| |||||||| |||||||| || ||||| | |||||| ||||| || Sbjct: 15432425 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 15432484 Query: 327 gtcacctccgcgcccgcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaa 386 |||||||| || || ||||| || || ||||||||||| || ||||||||||| || || Sbjct: 15432485 gtcacctctgcaccggcgcccgggcctcgcacgatcagcggttgctccttgtatcttgac 15432544 Query: 387 gtggtgaaggcgatgatgttgtcggatccagatagctgagcgaatgggtggtctctattg 446 || ||||||||||||||||||||||| ||||||||||| ||||| |||||||| | ||| Sbjct: 15432545 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcgaacgggtggtccttcttg 15432604 Query: 447 tacctctgcag 457 |||||| |||| Sbjct: 15432605 tacctccgcag 15432615 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 546 gcccaatcctggtcaaatgatggtagcttttgcatgaattcat 588 ||||| ||||||||||| ||||||| |||||||||| |||||| Sbjct: 15433041 gcccagtcctggtcaaaggatggtaacttttgcatgtattcat 15433083 Score = 42.1 bits (21), Expect = 2.4 Identities = 57/69 (82%) Strand = Plus / Plus Query: 611 tgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaaccagactc 670 |||||| |||||||| ||| ||| || ||||| ||||||||||| |||| ||||| || Sbjct: 15433174 tgcctccggcacaagactccttacaggaatatcagaaagctcaagcttcaatccagattc 15433233 Query: 671 ccttgcaag 679 ||| ||||| Sbjct: 15433234 cctagcaag 15433242
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 149 bits (75), Expect = 1e-32 Identities = 162/191 (84%) Strand = Plus / Plus Query: 267 tatgagggggcgccgaggtaggacgccagccgcaggatgtcgcagaagacgcctccggca 326 |||||||| ||||| |||||||| |||||||| || ||||| | |||||| ||||| || Sbjct: 118001 tatgagggagcgcctaggtaggaggccagccgtagtatgtcactgaagacacctcctgcg 118060 Query: 327 gtcacctccgcgcccgcgcctggcccgcgcacgatcagtggctgctccttgtacctcgaa 386 |||||||| || || ||||| || || ||||||||||| || ||||||||||| || || Sbjct: 118061 gtcacctctgcaccggcgcccgggcctcgcacgatcagcggttgctccttgtatcttgac 118120 Query: 387 gtggtgaaggcgatgatgttgtcggatccagatagctgagcgaatgggtggtctctattg 446 || ||||||||||||||||||||||| ||||||||||| ||||| |||||||| | ||| Sbjct: 118121 gtcgtgaaggcgatgatgttgtcggagccagatagctgcgcgaacgggtggtccttcttg 118180 Query: 447 tacctctgcag 457 |||||| |||| Sbjct: 118181 tacctccgcag 118191 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 546 gcccaatcctggtcaaatgatggtagcttttgcatgaattcat 588 ||||| ||||||||||| ||||||| |||||||||| |||||| Sbjct: 118617 gcccagtcctggtcaaaggatggtaacttttgcatgtattcat 118659 Score = 42.1 bits (21), Expect = 2.4 Identities = 57/69 (82%) Strand = Plus / Plus Query: 611 tgcctctggcacaaggctctctaccgggatatctgaaagctcaagtctcaaaccagactc 670 |||||| |||||||| ||| ||| || ||||| ||||||||||| |||| ||||| || Sbjct: 118750 tgcctccggcacaagactccttacaggaatatcagaaagctcaagcttcaatccagattc 118809 Query: 671 ccttgcaag 679 ||| ||||| Sbjct: 118810 cctagcaag 118818
>gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, complete sequence Length = 180397 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatcttatttgctt 157 ||||||||||||||| ||||||||||| Sbjct: 106272 aaacaaaacaaaacaccttatttgctt 106298
>gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, complete sequence Length = 168316 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 aaacaaaacaaaacatcttatt 152 |||||||||||||||||||||| Sbjct: 91146 aaacaaaacaaaacatcttatt 91125
>gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, complete sequence Length = 167209 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatcttatt 152 |||||||||||||||||||||| Sbjct: 50188 aaacaaaacaaaacatcttatt 50209
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete sequence Length = 232587 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 124 cactggcaaacaaaacaaaaca 145 |||||||||||||||||||||| Sbjct: 224766 cactggcaaacaaaacaaaaca 224787
>ref|NG_001334.1| Homo sapiens growth hormone locus (GH@) on chromosome 17 Length = 55000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ttttttattattgcactgataattc 46 |||||||||||| |||||||||||| Sbjct: 32961 ttttttattattacactgataattc 32937 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tttttattattgcactgataattc 46 ||||||||||| |||||||||||| Sbjct: 18210 tttttattattacactgataattc 18187
>gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, complete sequence Length = 183977 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cacactggcaaacaaaacaaaacat 146 ||||||| ||||||||||||||||| Sbjct: 4688 cacactgacaaacaaaacaaaacat 4664
>dbj|AK155956.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830002B03 product:sialyltransferase 7 ((alpha-N-acetylneuraminyl 2,3-betagalactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) D, full insert sequence Length = 4140 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caaacaaaacaaaacatctta 150 ||||||||||||||||||||| Sbjct: 2734 caaacaaaacaaaacatctta 2754
>gb|AC040958.20| Homo sapiens chromosome 17, clone RP11-630H24, complete sequence Length = 26211 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ttttttattattgcactgataattc 46 |||||||||||| |||||||||||| Sbjct: 21758 ttttttattattacactgataattc 21782
>gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, complete sequence Length = 188353 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatcttat 151 ||||||||||||||||||||| Sbjct: 86112 aaacaaaacaaaacatcttat 86132
>gb|AC127029.12| Homo sapiens chromosome 17, clone CTC-264K15, complete sequence Length = 101990 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ttttttattattgcactgataattc 46 |||||||||||| |||||||||||| Sbjct: 145 ttttttattattacactgataattc 169 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 tttttattattgcactgataattc 46 ||||||||||| |||||||||||| Sbjct: 14914 tttttattattacactgataattc 14937
>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence Length = 197913 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cacactggcaaacaaaacaaaacat 146 ||||||| ||||||||||||||||| Sbjct: 132152 cacactgacaaacaaaacaaaacat 132128
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caaacaaaacaaaacatctta 150 ||||||||||||||||||||| Sbjct: 11157 caaacaaaacaaaacatctta 11177
>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108, complete sequence Length = 117124 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 cacgtccaccactccgacgta 502 ||||||||||||||||||||| Sbjct: 13634 cacgtccaccactccgacgta 13614
>emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chromosome 4, complete sequence Length = 218691 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 actggcaaacaaaacaaaaca 145 ||||||||||||||||||||| Sbjct: 98953 actggcaaacaaaacaaaaca 98933
>gb|J03071.1|HUMGHCSA Human growth hormone (GH-1 and GH-2) and chorionic somatomammotropin (CS-1, CS-2 and CS-5) genes, complete cds Length = 66495 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ttttttattattgcactgataattc 46 |||||||||||| |||||||||||| Sbjct: 32962 ttttttattattacactgataattc 32938 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tttttattattgcactgataattc 46 ||||||||||| |||||||||||| Sbjct: 18210 tttttattattacactgataattc 18187
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 43556 ctggcaaacaaaacaaaaca 43537
>gb|AC102907.11| Mus musculus chromosome 1, clone RP24-291E1, complete sequence Length = 185121 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gaacagcacactggcaaaca 135 |||||||||||||||||||| Sbjct: 116300 gaacagcacactggcaaaca 116319
>ref|XM_526750.1| PREDICTED: Pan troglodytes similar to 60S ribosomal protein L6 (TAX-responsive enhancer element binding protein 107) (TAXREB107) (Neoplasm-related protein C140) (LOC471368), mRNA Length = 1053 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 487 ctggcaaacaaaacaaaaca 506
>gb|AY868413.1| Uncultured Bacteroidetes bacterium clone G50-0035 16S ribosomal RNA gene, partial sequence Length = 451 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 agtggctgctccttgtacct 382 |||||||||||||||||||| Sbjct: 178 agtggctgctccttgtacct 159
>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence Length = 216399 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 73922 aaacaaaacaaaacatctta 73941
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 170146 ctggcaaacaaaacaaaaca 170165
>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence Length = 208880 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 197574 aaacaaaacaaaacatctta 197593
>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete sequence Length = 221748 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 aaacaaaacaaaacatcttatttg 154 ||||||||||||||||||| |||| Sbjct: 207088 aaacaaaacaaaacatcttctttg 207065
>gb|DQ002803.1| Macaca mulatta chorionic somatommamotropin hormone 3 (CSH-3) and chorionic somatommamotropin hormone 4 (CSH-4) genes, complete cds Length = 16512 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tttttattattgcactgataattc 46 ||||||||||| |||||||||||| Sbjct: 5864 tttttattattacactgataattc 5841
>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence Length = 205816 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 31001 ctggcaaacaaaacaaaaca 30982
>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete sequence Length = 184690 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 aaacaaaacaaaacatcttatttg 154 ||||||||||||||||||| |||| Sbjct: 181651 aaacaaaacaaaacatcttgtttg 181628
>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence Length = 236510 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 72776 ctggcaaacaaaacaaaaca 72795
>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence Length = 207763 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 caaacaaaacaaaacatctt 149 |||||||||||||||||||| Sbjct: 88157 caaacaaaacaaaacatctt 88138
>emb|CT030685.6| Mouse DNA sequence from clone RP24-284M15 on chromosome 9, complete sequence Length = 171996 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 147044 ctggcaaacaaaacaaaaca 147063
>ref|XM_390261.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10085.1) partial mRNA Length = 1074 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 actggcaaacaaaacaaaac 144 |||||||||||||||||||| Sbjct: 669 actggcaaacaaaacaaaac 650
>gb|AC130539.3| Mus musculus BAC clone RP23-455J15 from chromosome 9, complete sequence Length = 179156 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 accccctaccaaggaacagc 122 |||||||||||||||||||| Sbjct: 176660 accccctaccaaggaacagc 176641
>gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome 7, complete sequence Length = 182272 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 57411 aaacaaaacaaaacatctta 57430
>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence Length = 186277 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 142549 ctggcaaacaaaacaaaaca 142568
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 150035 aaacaaaacaaaacatctta 150054
>gb|AC125405.4| Mus musculus BAC clone RP23-29M17 from 14, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 aaacaaaacaaaacatcttatttg 154 ||||||||||||||||||| |||| Sbjct: 44665 aaacaaaacaaaacatcttgtttg 44642
>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence Length = 250866 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 594 gacgagcatgacttaagtgcctct 617 |||||| ||||||||||||||||| Sbjct: 120529 gacgaggatgacttaagtgcctct 120506
>gb|AC146786.1| Pan troglodytes BAC clone RP43-34C4 from UL, complete sequence Length = 167484 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 29791 aaacaaaacaaaacatctta 29810
>gb|AC004869.1| Homo sapiens PAC clone RP4-732C22 from 7, complete sequence Length = 159044 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 23362 aaacaaaacaaaacatctta 23381
>emb|Z82196.2|HS288L1 Human DNA sequence from clone RP1-288L1 on chromosome 22, complete sequence Length = 118593 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 acactggcaaacaaaacaaa 142 |||||||||||||||||||| Sbjct: 58985 acactggcaaacaaaacaaa 59004
>emb|AL590787.24| Human DNA sequence from clone RP11-271M24 on chromosome 13 Contains the MTMR6 gene for myotubularin related protein 6, the 5' end of a novel gene (KIAA0410) and 2 CpG islands, complete sequence Length = 122589 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 caaacaaaacaaaacatcttattt 153 |||||||||||||||| ||||||| Sbjct: 106452 caaacaaaacaaaacaccttattt 106429
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 197207 ctggcaaacaaaacaaaaca 197188
>emb|AL133512.10| Human DNA sequence from clone RP13-131O13 on chromosome Xq21.2-21.33, complete sequence Length = 165968 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 111145 ctgcagcctcagcctcatgg 111164
>gb|AC164068.2| Mus musculus chromosome 1, clone RP23-5H15, complete sequence Length = 178006 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gaacagcacactggcaaaca 135 |||||||||||||||||||| Sbjct: 19903 gaacagcacactggcaaaca 19884
>gb|AC093004.2| Homo sapiens 3 BAC RP11-129J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159134 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 49541 aaacaaaacaaaacatctta 49560
>gb|AC091910.3| Homo sapiens chromosome 5 clone RP11-210I16, complete sequence Length = 169490 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 actggcaaacaaaacaaaac 144 |||||||||||||||||||| Sbjct: 143197 actggcaaacaaaacaaaac 143216
>gb|AC108937.4| Homo sapiens BAC clone RP11-679I19 from 4, complete sequence Length = 105033 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 62999 aaacaaaacaaaacatctta 62980
>gb|AC026730.6| Homo sapiens chromosome 5 clone CTD-2295C16, complete sequence Length = 134054 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 actggcaaacaaaacaaaac 144 |||||||||||||||||||| Sbjct: 5143 actggcaaacaaaacaaaac 5162
>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region, complete sequence Length = 235395 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 184878 ctgcagcctcagcctcatgg 184897
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 200513 ctggcaaacaaaacaaaaca 200494
>gb|AC148702.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326H24, complete sequence Length = 202513 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tagaagaggcattccctttt 25 |||||||||||||||||||| Sbjct: 78842 tagaagaggcattccctttt 78861
>gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206093 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 152552 aaacaaaacaaaacatctta 152571
>gb|AC126425.2| Lemur catta, clone -162D1, complete sequence Length = 154718 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 27462 ctggcaaacaaaacaaaaca 27481
>gb|AC131599.2| Lemur catta, clone -206F2, complete sequence Length = 155606 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 90275 ctggcaaacaaaacaaaaca 90256
>gb|AC140172.3| Homo sapiens chromosome 5 clone RP11-811J10, complete sequence Length = 178207 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 actggcaaacaaaacaaaac 144 |||||||||||||||||||| Sbjct: 42278 actggcaaacaaaacaaaac 42297
>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR09L14, complete sequence Length = 167368 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 110333 ctggcaaacaaaacaaaaca 110314
>gb|AC106728.6| Homo sapiens 3 BAC RP11-319J24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193623 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 157683 ctgcagcctcagcctcatgg 157664
>gb|AC009482.4| Homo sapiens BAC clone RP11-303F17 from 2, complete sequence Length = 109582 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 70685 ctggcaaacaaaacaaaaca 70704
>gb|AC009312.4| Homo sapiens BAC clone RP11-425F6 from 2, complete sequence Length = 204834 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 431 tgggtggtctctattgtacctctgcagt 458 ||||||| |||||| ||||||||||||| Sbjct: 100670 tgggtggactctatagtacctctgcagt 100643
>gb|AC084531.1|CBRG22D22 Caenorhabditis briggsae cosmid G22D22, complete sequence Length = 38174 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 caaaacaaaacatcttatttgctt 157 |||||||| ||||||||||||||| Sbjct: 28076 caaaacaacacatcttatttgctt 28099
>gb|AC006032.2|AC006032 Homo sapiens BAC clone RP11-115E20 from Y, complete sequence Length = 170282 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 162746 ctgcagcctcagcctcatgg 162765
>gb|AC010873.12| Homo sapiens BAC clone RP11-112N16 from 2, complete sequence Length = 180602 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 137840 ctggcaaacaaaacaaaaca 137821
>gb|AC090945.1| Homo sapiens chromosome 3 clone RP11-255O19 map 3p, complete sequence Length = 160285 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 48300 ctggcaaacaaaacaaaaca 48319
>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence Length = 164500 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 28679 aaacaaaacaaaacatctta 28698
>gb|AC127302.3| Mus musculus BAC clone RP23-269P7 from chromosome 9, complete sequence Length = 200073 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 21519 ctggcaaacaaaacaaaaca 21538
>gb|AF240629.1|AF240629 Homo sapiens chromosome 21 map 21q21 clone B47C12, complete sequence Length = 151696 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 21178 ctgcagcctcagcctcatgg 21159
>ref|XM_318719.2| Anopheles gambiae str. PEST ENSANGP00000022680 (ENSANGG00000020222), partial mRNA Length = 657 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 tggtgaaggcgatgatgttgtcgg 411 ||||| |||||||||||||||||| Sbjct: 198 tggtgtaggcgatgatgttgtcgg 175
>emb|AL773596.12| Zebrafish DNA sequence from clone CH211-208G24 in linkage group 17, complete sequence Length = 206778 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 46829 aaacaaaacaaaacatctta 46848
>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete sequence Length = 168565 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 159850 ctgcagcctcagcctcatgg 159869
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 207071 ctgcagcctcagcctcatgg 207052
>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence Length = 190623 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 104500 aaacaaaacaaaacatctta 104519
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 cgtaccgcagtacttcgcct 518 |||||||||||||||||||| Sbjct: 5723087 cgtaccgcagtacttcgcct 5723068
>gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.700_H_6, complete sequence Length = 175793 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatcttatttg 154 |||||||||||||||| ||||||| Sbjct: 105552 aaacaaaacaaaacatgttatttg 105575
>emb|AL109772.3|HS21N069 Homo sapiens chromosome 21 sequence from cosmid ICRFc103 9N06 map 21q21 region D21S189-LA297, complete sequence Length = 39175 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ctgcagcctcagcctcatgg 536 |||||||||||||||||||| Sbjct: 21862 ctgcagcctcagcctcatgg 21881
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence Length = 230313 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctggcaaacaaaacaaaaca 145 |||||||||||||||||||| Sbjct: 40599 ctggcaaacaaaacaaaaca 40618
>gb|AC138313.4| Mus musculus BAC clone RP23-243P9 from 9, complete sequence Length = 195883 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 accccctaccaaggaacagc 122 |||||||||||||||||||| Sbjct: 122511 accccctaccaaggaacagc 122530
>emb|AM039899.1| Hordeum vulgare partial mRNA for chromomethylase 1 (cmt1 gene) Length = 2441 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ttgtgcaagaagggtacaag 218 |||||||||||||||||||| Sbjct: 944 ttgtgcaagaagggtacaag 963
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence Length = 173574 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatcttatttg 154 ||||||||||||||||||| |||| Sbjct: 110530 aaacaaaacaaaacatcttctttg 110553
>gb|AC132247.3| Mus musculus BAC clone RP24-424J1 from 19, complete sequence Length = 187078 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 agttctacccttcccttccc 475 |||||||||||||||||||| Sbjct: 126265 agttctacccttcccttccc 126284
>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete sequence Length = 241053 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 114 aggaacagcacactggcaaacaaaacaaaaca 145 ||||||||| |||| |||||||||||||||| Sbjct: 202957 aggaacagctcactcacaaacaaaacaaaaca 202988
>emb|AL844843.4| Mouse DNA sequence from clone RP23-376P3 on chromosome X, complete sequence Length = 193470 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacaaaacatctta 150 |||||||||||||||||||| Sbjct: 14203 aaacaaaacaaaacatctta 14222
>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete sequence Length = 237318 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 114 aggaacagcacactggcaaacaaaacaaaaca 145 ||||||||| |||| |||||||||||||||| Sbjct: 61920 aggaacagctcactcacaaacaaaacaaaaca 61951
>dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1043D8 Length = 230879 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 gcctgcagcctcagcctcat 534 |||||||||||||||||||| Sbjct: 182791 gcctgcagcctcagcctcat 182810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,984,641 Number of Sequences: 3902068 Number of extensions: 7984641 Number of successful extensions: 507960 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 506964 Number of HSP's gapped (non-prelim): 993 length of query: 690 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 667 effective length of database: 17,143,297,704 effective search space: 11434579568568 effective search space used: 11434579568568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)